Query 033605
Match_columns 115
No_of_seqs 130 out of 1124
Neff 10.7
Searched_HMMs 29240
Date Mon Mar 25 06:25:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033605.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033605hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wy7_A Hypothetical protein PH 99.8 3E-18 1E-22 104.9 13.2 108 1-109 3-110 (207)
2 1ne2_A Hypothetical protein TA 99.7 3.2E-17 1.1E-21 99.9 10.8 102 3-109 7-108 (200)
3 4gek_A TRNA (CMO5U34)-methyltr 99.7 2.4E-16 8.3E-21 99.9 11.5 66 47-112 69-139 (261)
4 1pjz_A Thiopurine S-methyltran 99.7 2.6E-16 8.8E-21 96.3 7.3 69 42-111 16-97 (203)
5 1nkv_A Hypothetical protein YJ 99.7 1.6E-15 5.5E-20 95.3 11.0 82 32-113 20-103 (256)
6 3tqs_A Ribosomal RNA small sub 99.7 1E-15 3.6E-20 96.7 9.4 78 33-112 14-91 (255)
7 3p9n_A Possible methyltransfer 99.6 7.5E-16 2.6E-20 93.1 8.1 81 28-109 25-106 (189)
8 4hc4_A Protein arginine N-meth 99.6 8.3E-16 2.8E-20 101.7 8.6 67 47-114 82-150 (376)
9 3kkz_A Uncharacterized protein 99.6 2.9E-15 1E-19 94.8 10.1 78 35-112 32-112 (267)
10 1qam_A ERMC' methyltransferase 99.6 2.8E-15 9.7E-20 94.1 9.3 80 31-112 13-92 (244)
11 1wzn_A SAM-dependent methyltra 99.6 7E-15 2.4E-19 92.2 11.0 79 35-114 28-106 (252)
12 3ftd_A Dimethyladenosine trans 99.6 1.1E-15 3.7E-20 96.3 7.3 79 31-112 14-92 (249)
13 1nv8_A HEMK protein; class I a 99.6 2.6E-15 9E-20 96.2 9.1 82 26-107 101-184 (284)
14 2gb4_A Thiopurine S-methyltran 99.6 5.2E-15 1.8E-19 93.4 9.5 64 47-111 67-148 (252)
15 3fut_A Dimethyladenosine trans 99.6 5.9E-15 2E-19 93.9 9.8 76 33-112 32-107 (271)
16 3f4k_A Putative methyltransfer 99.6 8.2E-15 2.8E-19 92.1 10.4 78 35-112 32-112 (257)
17 3gru_A Dimethyladenosine trans 99.6 7.1E-15 2.4E-19 94.5 10.2 79 32-112 34-112 (295)
18 3bus_A REBM, methyltransferase 99.6 1.3E-14 4.4E-19 92.0 11.3 82 31-112 44-127 (273)
19 1vl5_A Unknown conserved prote 99.6 7.4E-15 2.5E-19 92.6 10.1 76 36-112 25-101 (260)
20 3njr_A Precorrin-6Y methylase; 99.6 1.2E-14 4.2E-19 89.0 10.8 68 39-107 46-115 (204)
21 3r0q_C Probable protein argini 99.6 8.7E-15 3E-19 97.0 10.7 81 33-114 48-130 (376)
22 3uzu_A Ribosomal RNA small sub 99.6 3.1E-15 1.1E-19 95.6 8.2 78 32-112 26-106 (279)
23 1zx0_A Guanidinoacetate N-meth 99.6 3.2E-15 1.1E-19 93.2 8.1 80 32-112 45-126 (236)
24 3mti_A RRNA methylase; SAM-dep 99.6 9.2E-15 3.1E-19 87.9 9.4 61 47-108 21-82 (185)
25 1zq9_A Probable dimethyladenos 99.6 9.8E-15 3.3E-19 93.6 9.7 78 33-111 13-92 (285)
26 2yxd_A Probable cobalt-precorr 99.6 1.4E-14 4.7E-19 86.6 9.8 76 34-111 21-97 (183)
27 2ift_A Putative methylase HI07 99.6 1.9E-15 6.5E-20 92.3 6.1 62 48-109 53-117 (201)
28 2fyt_A Protein arginine N-meth 99.6 1.8E-14 6E-19 94.4 10.8 74 37-111 53-128 (340)
29 4hg2_A Methyltransferase type 99.6 1.9E-15 6.5E-20 95.6 6.0 72 34-113 27-98 (257)
30 3g89_A Ribosomal RNA small sub 99.6 5.3E-15 1.8E-19 93.1 8.0 64 47-110 79-144 (249)
31 3jwg_A HEN1, methyltransferase 99.6 1.4E-14 4.7E-19 89.2 9.6 81 32-112 13-100 (219)
32 2h1r_A Dimethyladenosine trans 99.6 5E-15 1.7E-19 95.5 8.0 78 33-111 27-105 (299)
33 3vc1_A Geranyl diphosphate 2-C 99.6 1.7E-14 5.7E-19 93.3 10.3 78 35-112 103-183 (312)
34 2fhp_A Methylase, putative; al 99.6 9.2E-15 3.1E-19 87.8 8.4 76 33-108 28-106 (187)
35 3ofk_A Nodulation protein S; N 99.6 1.8E-14 6E-19 88.5 9.8 77 35-113 38-114 (216)
36 3fpf_A Mtnas, putative unchara 99.6 2.9E-14 9.8E-19 91.5 11.0 68 42-109 116-185 (298)
37 2b3t_A Protein methyltransfera 99.6 1.9E-14 6.4E-19 91.7 10.2 81 27-108 89-171 (276)
38 2y1w_A Histone-arginine methyl 99.6 2.7E-14 9.4E-19 93.7 11.0 80 34-114 36-117 (348)
39 3hem_A Cyclopropane-fatty-acyl 99.6 2.4E-14 8.1E-19 92.2 10.5 77 31-108 55-134 (302)
40 3dlc_A Putative S-adenosyl-L-m 99.6 1.5E-14 5.1E-19 88.6 9.0 79 33-112 29-109 (219)
41 3jwh_A HEN1; methyltransferase 99.6 2.6E-14 8.8E-19 87.9 10.0 80 32-111 13-99 (217)
42 3g5t_A Trans-aconitate 3-methy 99.6 7.7E-15 2.6E-19 94.3 7.9 77 35-112 24-105 (299)
43 3g2m_A PCZA361.24; SAM-depende 99.6 1.7E-14 5.8E-19 92.7 9.4 78 35-114 70-151 (299)
44 2o57_A Putative sarcosine dime 99.6 2.5E-14 8.6E-19 91.7 10.2 82 31-112 61-148 (297)
45 1xxl_A YCGJ protein; structura 99.6 3.2E-14 1.1E-18 88.8 10.1 73 39-112 12-85 (239)
46 3dh0_A SAM dependent methyltra 99.6 1.7E-14 5.9E-19 88.7 8.7 75 38-112 27-104 (219)
47 2esr_A Methyltransferase; stru 99.6 1.3E-14 4.3E-19 86.7 7.8 72 36-107 18-92 (177)
48 2fpo_A Methylase YHHF; structu 99.6 5.6E-15 1.9E-19 90.3 6.4 60 48-107 54-114 (202)
49 3b3j_A Histone-arginine methyl 99.6 2.1E-14 7.3E-19 97.7 9.8 80 34-114 144-225 (480)
50 3gdh_A Trimethylguanosine synt 99.6 2.4E-14 8.2E-19 89.3 9.3 65 48-113 78-144 (241)
51 2xvm_A Tellurite resistance pr 99.6 3.6E-14 1.2E-18 85.9 9.7 70 43-113 27-97 (199)
52 3dtn_A Putative methyltransfer 99.6 5.2E-14 1.8E-18 87.4 10.6 75 38-113 33-109 (234)
53 2fca_A TRNA (guanine-N(7)-)-me 99.6 1.6E-14 5.4E-19 89.0 8.1 62 48-109 38-101 (213)
54 3gu3_A Methyltransferase; alph 99.6 3.1E-14 1.1E-18 91.0 9.8 80 35-114 8-90 (284)
55 1kpg_A CFA synthase;, cyclopro 99.6 4.7E-14 1.6E-18 90.0 10.4 77 32-109 48-127 (287)
56 1uwv_A 23S rRNA (uracil-5-)-me 99.6 6.3E-14 2.2E-18 94.4 11.4 79 28-107 266-345 (433)
57 3e05_A Precorrin-6Y C5,15-meth 99.6 7.9E-14 2.7E-18 85.1 10.9 71 38-108 30-102 (204)
58 3g5l_A Putative S-adenosylmeth 99.6 6.7E-14 2.3E-18 87.8 10.7 74 37-112 33-106 (253)
59 1xdz_A Methyltransferase GIDB; 99.6 6.2E-15 2.1E-19 92.2 5.9 63 48-110 70-134 (240)
60 3orh_A Guanidinoacetate N-meth 99.6 1.7E-14 5.9E-19 90.1 7.9 62 47-108 59-120 (236)
61 3hnr_A Probable methyltransfer 99.5 6.5E-14 2.2E-18 86.1 10.2 62 48-113 45-106 (220)
62 3q7e_A Protein arginine N-meth 99.5 2.5E-14 8.4E-19 94.0 8.7 65 47-112 65-131 (349)
63 3ujc_A Phosphoethanolamine N-m 99.5 2.7E-14 9.4E-19 89.9 8.7 79 33-112 40-118 (266)
64 3m70_A Tellurite resistance pr 99.5 2.6E-14 8.9E-19 91.2 8.6 66 47-113 119-184 (286)
65 1g6q_1 HnRNP arginine N-methyl 99.5 3.9E-14 1.3E-18 92.3 9.5 64 47-111 37-102 (328)
66 1yzh_A TRNA (guanine-N(7)-)-me 99.5 4.6E-14 1.6E-18 86.8 9.2 62 48-109 41-104 (214)
67 1fbn_A MJ fibrillarin homologu 99.5 3.7E-14 1.3E-18 88.1 8.8 66 41-107 67-133 (230)
68 3lbf_A Protein-L-isoaspartate 99.5 9E-14 3.1E-18 85.1 10.3 77 34-111 63-140 (210)
69 3lec_A NADB-rossmann superfami 99.5 3.7E-14 1.3E-18 88.1 8.5 64 48-111 21-87 (230)
70 3mq2_A 16S rRNA methyltransfer 99.5 1.8E-14 6.2E-19 88.7 7.0 66 46-111 25-96 (218)
71 1xtp_A LMAJ004091AAA; SGPP, st 99.5 7.1E-14 2.4E-18 87.6 9.8 77 35-112 80-156 (254)
72 3gnl_A Uncharacterized protein 99.5 3.5E-14 1.2E-18 88.9 8.3 64 48-111 21-87 (244)
73 3ege_A Putative methyltransfer 99.5 1.2E-14 4E-19 91.9 6.2 72 35-112 21-92 (261)
74 3kr9_A SAM-dependent methyltra 99.5 5E-14 1.7E-18 87.4 8.6 62 48-109 15-80 (225)
75 1jsx_A Glucose-inhibited divis 99.5 4.1E-14 1.4E-18 86.4 8.1 65 48-112 65-131 (207)
76 1ve3_A Hypothetical protein PH 99.5 1.4E-13 4.7E-18 84.9 10.5 77 33-112 25-101 (227)
77 1y8c_A S-adenosylmethionine-de 99.5 5.7E-14 1.9E-18 87.5 8.8 65 48-113 37-101 (246)
78 1qyr_A KSGA, high level kasuga 99.5 1.4E-14 4.9E-19 91.3 6.0 74 35-112 8-83 (252)
79 3grz_A L11 mtase, ribosomal pr 99.5 2.2E-13 7.5E-18 83.1 11.1 63 47-109 59-122 (205)
80 3uwp_A Histone-lysine N-methyl 99.5 7.2E-14 2.5E-18 93.1 9.5 83 29-111 154-247 (438)
81 4dzr_A Protein-(glutamine-N5) 99.5 4.9E-15 1.7E-19 90.6 3.6 81 27-107 8-90 (215)
82 3lpm_A Putative methyltransfer 99.5 5.6E-14 1.9E-18 88.7 8.4 68 42-109 42-112 (259)
83 1dus_A MJ0882; hypothetical pr 99.5 2.2E-13 7.7E-18 81.9 10.7 72 36-108 40-114 (194)
84 2fk8_A Methoxy mycolic acid sy 99.5 1.4E-13 4.7E-18 89.1 10.4 77 33-109 75-153 (318)
85 3ccf_A Cyclopropane-fatty-acyl 99.5 2.1E-14 7.2E-19 91.4 6.4 70 40-114 49-118 (279)
86 2kw5_A SLR1183 protein; struct 99.5 1.1E-13 3.6E-18 84.3 9.2 63 48-112 30-92 (202)
87 2frn_A Hypothetical protein PH 99.5 3.4E-14 1.2E-18 90.7 7.2 65 48-112 125-191 (278)
88 3eey_A Putative rRNA methylase 99.5 7.2E-14 2.5E-18 84.7 8.3 63 47-109 21-87 (197)
89 1vbf_A 231AA long hypothetical 99.5 1.9E-13 6.4E-18 84.8 10.3 72 34-107 56-127 (231)
90 3d2l_A SAM-dependent methyltra 99.5 1.4E-13 5E-18 85.6 9.8 76 35-114 22-97 (243)
91 3tm4_A TRNA (guanine N2-)-meth 99.5 8.7E-14 3E-18 92.1 9.2 79 33-112 203-284 (373)
92 3dxy_A TRNA (guanine-N(7)-)-me 99.5 3.1E-14 1.1E-18 88.0 6.7 61 48-108 34-96 (218)
93 2p35_A Trans-aconitate 2-methy 99.5 1.5E-13 5.1E-18 86.3 9.9 73 33-109 18-91 (259)
94 2yqz_A Hypothetical protein TT 99.5 2.5E-13 8.7E-18 85.4 10.8 81 31-112 21-102 (263)
95 4htf_A S-adenosylmethionine-de 99.5 2.3E-13 8E-18 86.8 10.8 71 37-109 58-130 (285)
96 3k6r_A Putative transferase PH 99.5 8.6E-14 2.9E-18 88.8 8.6 66 48-113 125-192 (278)
97 1ri5_A MRNA capping enzyme; me 99.5 1.2E-13 4E-18 88.3 9.3 64 47-110 63-128 (298)
98 3pfg_A N-methyltransferase; N, 99.5 2E-13 6.7E-18 86.2 10.0 75 33-114 37-111 (263)
99 3tma_A Methyltransferase; thum 99.5 1.9E-13 6.4E-18 89.9 10.1 81 32-112 187-270 (354)
100 3p2e_A 16S rRNA methylase; met 99.5 5.2E-14 1.8E-18 87.4 6.7 63 48-110 24-92 (225)
101 4azs_A Methyltransferase WBDD; 99.5 2.7E-13 9.4E-18 94.0 10.9 60 48-108 66-126 (569)
102 3hm2_A Precorrin-6Y C5,15-meth 99.5 3.1E-13 1.1E-17 80.5 9.8 69 38-107 15-86 (178)
103 3mgg_A Methyltransferase; NYSG 99.5 2E-13 6.9E-18 86.6 9.3 77 36-112 25-103 (276)
104 2h00_A Methyltransferase 10 do 99.5 2.2E-13 7.6E-18 85.6 9.4 76 32-107 47-127 (254)
105 1ws6_A Methyltransferase; stru 99.5 1.9E-13 6.3E-18 80.9 8.5 59 48-107 41-99 (171)
106 3ckk_A TRNA (guanine-N(7)-)-me 99.5 1.1E-13 3.8E-18 86.4 7.9 63 47-109 45-116 (235)
107 3htx_A HEN1; HEN1, small RNA m 99.5 2.3E-13 7.8E-18 97.0 10.1 82 31-112 704-794 (950)
108 1m6y_A S-adenosyl-methyltransf 99.5 1.3E-13 4.5E-18 88.9 8.2 73 37-109 15-88 (301)
109 3m33_A Uncharacterized protein 99.5 2E-13 6.7E-18 84.6 8.7 72 34-111 35-107 (226)
110 2ex4_A Adrenal gland protein A 99.5 1.2E-13 4.1E-18 86.2 7.7 65 48-112 79-144 (241)
111 3lcc_A Putative methyl chlorid 99.5 1.2E-13 4.2E-18 85.8 7.8 65 48-113 66-132 (235)
112 2p7i_A Hypothetical protein; p 99.5 1.5E-13 5.3E-18 85.6 8.0 61 47-111 41-101 (250)
113 3bkx_A SAM-dependent methyltra 99.5 3.4E-13 1.2E-17 85.5 9.6 80 33-112 28-120 (275)
114 3iv6_A Putative Zn-dependent a 99.5 2.5E-13 8.7E-18 86.0 8.8 58 36-94 33-90 (261)
115 3bt7_A TRNA (uracil-5-)-methyl 99.5 3.2E-13 1.1E-17 89.3 9.6 80 27-108 193-273 (369)
116 3ocj_A Putative exported prote 99.5 9.9E-14 3.4E-18 89.4 7.0 68 46-113 116-187 (305)
117 2nxc_A L11 mtase, ribosomal pr 99.5 2.8E-13 9.4E-18 85.5 8.8 76 30-107 103-178 (254)
118 3dmg_A Probable ribosomal RNA 99.5 5.1E-13 1.8E-17 88.7 10.3 78 33-111 216-295 (381)
119 1dl5_A Protein-L-isoaspartate 99.5 3.6E-13 1.2E-17 87.4 9.3 76 35-110 62-140 (317)
120 2p8j_A S-adenosylmethionine-de 99.5 2.5E-13 8.7E-18 82.8 8.1 66 47-112 22-87 (209)
121 3a27_A TYW2, uncharacterized p 99.5 4.5E-13 1.6E-17 85.3 9.5 64 46-109 117-182 (272)
122 1nt2_A Fibrillarin-like PRE-rR 99.5 2.4E-13 8.3E-18 83.6 8.0 63 45-108 54-117 (210)
123 3h2b_A SAM-dependent methyltra 99.5 4.5E-13 1.5E-17 81.5 9.0 60 48-112 41-100 (203)
124 2vdv_E TRNA (guanine-N(7)-)-me 99.5 2.6E-13 9E-18 85.1 8.1 60 48-107 49-118 (246)
125 2pxx_A Uncharacterized protein 99.5 6.2E-13 2.1E-17 81.2 9.5 65 47-112 41-105 (215)
126 3fzg_A 16S rRNA methylase; met 99.5 3.4E-13 1.2E-17 81.4 8.0 65 47-111 48-113 (200)
127 2gs9_A Hypothetical protein TT 99.5 8.9E-13 3.1E-17 80.6 10.1 67 38-112 27-93 (211)
128 3sm3_A SAM-dependent methyltra 99.5 4.9E-13 1.7E-17 82.7 9.0 64 48-112 30-99 (235)
129 1yub_A Ermam, rRNA methyltrans 99.5 4.7E-15 1.6E-19 93.1 -0.2 74 36-111 17-90 (245)
130 3ntv_A MW1564 protein; rossman 99.5 2.7E-13 9.3E-18 84.4 7.8 61 48-108 71-134 (232)
131 3bkw_A MLL3908 protein, S-aden 99.5 6.3E-13 2.2E-17 82.7 9.5 71 40-112 35-105 (243)
132 1o9g_A RRNA methyltransferase; 99.5 1.4E-13 4.7E-18 86.5 6.5 63 32-94 35-100 (250)
133 3evz_A Methyltransferase; NYSG 99.5 7.1E-13 2.4E-17 82.1 9.5 62 46-107 53-115 (230)
134 2jjq_A Uncharacterized RNA met 99.5 9.6E-13 3.3E-17 88.5 10.7 78 28-109 273-350 (425)
135 1jg1_A PIMT;, protein-L-isoasp 99.5 6.8E-13 2.3E-17 82.6 9.3 72 34-105 77-149 (235)
136 1l3i_A Precorrin-6Y methyltran 99.5 7.2E-13 2.5E-17 79.5 9.1 71 36-107 21-93 (192)
137 2yxe_A Protein-L-isoaspartate 99.4 8.8E-13 3E-17 80.9 9.6 74 34-107 63-139 (215)
138 3q87_B N6 adenine specific DNA 99.4 6.2E-13 2.1E-17 79.2 8.5 71 28-111 5-75 (170)
139 3dr5_A Putative O-methyltransf 99.4 5E-13 1.7E-17 82.8 8.3 82 27-108 35-121 (221)
140 3l8d_A Methyltransferase; stru 99.4 7.4E-13 2.5E-17 82.4 8.9 73 35-112 42-114 (242)
141 3bgv_A MRNA CAP guanine-N7 met 99.4 7E-13 2.4E-17 85.7 9.0 62 48-109 34-103 (313)
142 3mb5_A SAM-dependent methyltra 99.4 1.3E-12 4.5E-17 82.0 9.9 73 36-108 81-157 (255)
143 2pwy_A TRNA (adenine-N(1)-)-me 99.4 1.8E-12 6.2E-17 81.4 10.4 76 37-112 85-164 (258)
144 3k0b_A Predicted N6-adenine-sp 99.4 9.7E-13 3.3E-17 87.7 9.6 86 29-114 182-308 (393)
145 2qm3_A Predicted methyltransfe 99.4 2.4E-12 8.2E-17 85.2 11.4 63 47-110 171-236 (373)
146 3g07_A 7SK snRNA methylphospha 99.4 6.7E-13 2.3E-17 85.2 8.5 47 48-94 46-93 (292)
147 3bxo_A N,N-dimethyltransferase 99.4 1.3E-12 4.5E-17 81.1 9.6 72 35-113 29-100 (239)
148 2ozv_A Hypothetical protein AT 99.4 9E-13 3.1E-17 83.4 8.7 67 42-108 30-102 (260)
149 3u81_A Catechol O-methyltransf 99.4 4.4E-13 1.5E-17 82.8 7.0 60 48-107 58-121 (221)
150 3ldu_A Putative methylase; str 99.4 9.2E-13 3.2E-17 87.6 8.9 83 32-114 179-302 (385)
151 3thr_A Glycine N-methyltransfe 99.4 6.4E-13 2.2E-17 85.0 7.6 70 39-109 48-122 (293)
152 4df3_A Fibrillarin-like rRNA/T 99.4 1.1E-12 3.6E-17 81.8 8.3 66 42-108 71-138 (233)
153 4dcm_A Ribosomal RNA large sub 99.4 1.4E-12 4.8E-17 86.4 9.3 69 39-107 213-286 (375)
154 3ou2_A SAM-dependent methyltra 99.4 1.6E-12 5.6E-17 79.6 9.1 58 46-108 44-102 (218)
155 1i9g_A Hypothetical protein RV 99.4 2.3E-12 7.9E-17 81.9 9.9 77 36-112 87-169 (280)
156 1yb2_A Hypothetical protein TA 99.4 1.5E-12 5.1E-17 82.9 8.9 69 39-107 101-173 (275)
157 3ggd_A SAM-dependent methyltra 99.4 9.1E-13 3.1E-17 82.3 7.7 62 47-111 55-116 (245)
158 1u2z_A Histone-lysine N-methyl 99.4 2.6E-12 9E-17 86.3 10.3 73 34-106 228-311 (433)
159 2b78_A Hypothetical protein SM 99.4 1.5E-12 5.1E-17 86.6 9.0 61 47-107 211-274 (385)
160 1g8a_A Fibrillarin-like PRE-rR 99.4 1.9E-12 6.7E-17 80.1 9.0 63 45-108 70-134 (227)
161 3e23_A Uncharacterized protein 99.4 1.3E-12 4.5E-17 79.9 8.1 71 35-113 32-102 (211)
162 3frh_A 16S rRNA methylase; met 99.4 2E-12 6.8E-17 80.6 8.7 66 47-114 104-169 (253)
163 3ldg_A Putative uncharacterize 99.4 2.3E-12 7.8E-17 85.6 9.4 83 32-114 178-301 (384)
164 2igt_A SAM dependent methyltra 99.4 1.3E-12 4.5E-17 85.3 7.4 60 48-108 153-215 (332)
165 3c0k_A UPF0064 protein YCCW; P 99.4 2.7E-12 9.2E-17 85.5 9.0 62 47-108 219-283 (396)
166 2r3s_A Uncharacterized protein 99.4 5.6E-12 1.9E-16 82.0 10.2 76 37-113 152-232 (335)
167 2yvl_A TRMI protein, hypotheti 99.4 8E-12 2.7E-16 78.0 10.5 70 39-109 82-153 (248)
168 3tfw_A Putative O-methyltransf 99.4 1.3E-12 4.5E-17 82.1 6.8 60 48-107 63-126 (248)
169 4fsd_A Arsenic methyltransfera 99.4 1.7E-12 5.7E-17 86.2 7.7 66 47-112 82-164 (383)
170 3id6_C Fibrillarin-like rRNA/T 99.4 3.6E-12 1.2E-16 79.5 8.7 63 45-108 73-137 (232)
171 3bzb_A Uncharacterized protein 99.4 3.8E-12 1.3E-16 81.3 8.9 74 33-106 64-149 (281)
172 3duw_A OMT, O-methyltransferas 99.4 1.7E-12 5.8E-17 80.1 7.0 73 32-107 45-121 (223)
173 3tr6_A O-methyltransferase; ce 99.4 7E-12 2.4E-16 77.4 9.7 61 48-108 64-128 (225)
174 2pbf_A Protein-L-isoaspartate 99.4 7.8E-12 2.7E-16 77.3 10.0 64 46-109 78-153 (227)
175 3c3p_A Methyltransferase; NP_9 99.4 2.6E-12 9E-17 78.7 7.8 78 28-108 39-120 (210)
176 3ajd_A Putative methyltransfer 99.4 1.7E-12 5.9E-17 82.7 7.1 66 45-110 80-148 (274)
177 2b25_A Hypothetical protein; s 99.4 5E-12 1.7E-16 82.5 9.4 71 38-108 95-179 (336)
178 2yx1_A Hypothetical protein MJ 99.4 5.8E-12 2E-16 82.4 9.7 60 48-109 195-256 (336)
179 1x19_A CRTF-related protein; m 99.4 1.1E-11 3.7E-16 81.6 10.9 76 36-112 178-256 (359)
180 2f8l_A Hypothetical protein LM 99.4 2.5E-12 8.6E-17 84.3 7.7 87 22-109 104-197 (344)
181 2ipx_A RRNA 2'-O-methyltransfe 99.4 3E-12 1E-16 79.6 7.6 65 43-108 72-138 (233)
182 2avn_A Ubiquinone/menaquinone 99.4 1.1E-11 3.6E-16 78.2 10.2 59 48-112 54-112 (260)
183 2vdw_A Vaccinia virus capping 99.4 2.3E-12 7.8E-17 83.2 7.1 58 48-105 48-112 (302)
184 1i1n_A Protein-L-isoaspartate 99.4 8.5E-12 2.9E-16 77.1 9.4 65 46-110 75-147 (226)
185 2pjd_A Ribosomal RNA small sub 99.4 2.7E-12 9.2E-17 84.1 7.5 73 37-109 185-258 (343)
186 3cgg_A SAM-dependent methyltra 99.3 9.3E-12 3.2E-16 74.8 9.3 61 47-112 45-105 (195)
187 1ixk_A Methyltransferase; open 99.3 4.7E-12 1.6E-16 82.2 8.4 68 43-110 113-183 (315)
188 1o54_A SAM-dependent O-methylt 99.3 1.3E-11 4.3E-16 78.6 10.1 71 38-108 102-176 (277)
189 2gpy_A O-methyltransferase; st 99.3 1.8E-11 6.3E-16 76.0 10.4 61 48-108 54-117 (233)
190 1sui_A Caffeoyl-COA O-methyltr 99.3 8.8E-12 3E-16 78.4 8.7 74 32-108 66-143 (247)
191 1p91_A Ribosomal RNA large sub 99.3 2.1E-11 7.3E-16 77.1 10.3 62 47-112 84-146 (269)
192 3r3h_A O-methyltransferase, SA 99.3 3E-12 1E-16 80.2 6.3 73 33-108 48-124 (242)
193 2a14_A Indolethylamine N-methy 99.3 3.7E-12 1.3E-16 80.6 6.6 49 45-93 52-100 (263)
194 2hnk_A SAM-dependent O-methylt 99.3 2.1E-11 7.2E-16 76.0 9.9 60 48-107 60-123 (239)
195 3ll7_A Putative methyltransfer 99.3 5.2E-12 1.8E-16 84.3 7.3 60 48-108 93-155 (410)
196 2as0_A Hypothetical protein PH 99.3 7.9E-12 2.7E-16 83.3 8.1 61 48-108 217-279 (396)
197 3dp7_A SAM-dependent methyltra 99.3 1.9E-11 6.5E-16 80.6 9.7 65 47-112 178-247 (363)
198 1r18_A Protein-L-isoaspartate( 99.3 5.6E-12 1.9E-16 78.1 6.8 62 46-107 82-156 (227)
199 3gwz_A MMCR; methyltransferase 99.3 4.7E-11 1.6E-15 78.9 11.6 74 37-112 191-267 (369)
200 2r6z_A UPF0341 protein in RSP 99.3 1.4E-12 4.7E-17 82.6 4.0 61 47-108 82-151 (258)
201 4dmg_A Putative uncharacterize 99.3 1E-11 3.4E-16 82.8 8.3 60 48-108 214-273 (393)
202 3e8s_A Putative SAM dependent 99.3 7.2E-12 2.4E-16 77.0 7.1 56 47-108 51-106 (227)
203 1qzz_A RDMB, aclacinomycin-10- 99.3 2.3E-11 8E-16 80.2 10.0 72 38-111 172-246 (374)
204 2g72_A Phenylethanolamine N-me 99.3 9.8E-12 3.3E-16 79.5 7.9 46 47-92 70-115 (289)
205 2avd_A Catechol-O-methyltransf 99.3 9.1E-12 3.1E-16 77.0 7.4 62 47-108 68-133 (229)
206 3c3y_A Pfomt, O-methyltransfer 99.3 2.7E-11 9.4E-16 75.6 9.6 73 33-108 58-134 (237)
207 3dli_A Methyltransferase; PSI- 99.3 5E-12 1.7E-16 78.8 6.2 58 47-112 40-99 (240)
208 3mcz_A O-methyltransferase; ad 99.3 2E-11 7E-16 79.9 9.1 73 39-112 169-247 (352)
209 2bm8_A Cephalosporin hydroxyla 99.3 2.3E-12 7.9E-17 80.5 4.4 57 48-108 81-142 (236)
210 3i9f_A Putative type 11 methyl 99.3 4.2E-12 1.4E-16 75.2 5.2 55 45-104 14-68 (170)
211 3lcv_B Sisomicin-gentamicin re 99.3 5E-12 1.7E-16 79.7 5.7 68 47-114 131-199 (281)
212 1wxx_A TT1595, hypothetical pr 99.3 6.5E-12 2.2E-16 83.4 6.6 60 48-108 209-269 (382)
213 3opn_A Putative hemolysin; str 99.3 5.1E-12 1.8E-16 78.8 5.6 55 38-92 26-81 (232)
214 2i62_A Nicotinamide N-methyltr 99.3 9E-12 3.1E-16 78.4 6.7 66 45-110 53-149 (265)
215 1tw3_A COMT, carminomycin 4-O- 99.3 4.5E-11 1.5E-15 78.5 10.2 68 39-107 174-244 (360)
216 2qe6_A Uncharacterized protein 99.3 4.9E-11 1.7E-15 76.0 9.9 72 36-108 64-140 (274)
217 3v97_A Ribosomal RNA large sub 99.3 2.5E-11 8.4E-16 86.0 9.3 60 48-107 539-601 (703)
218 3adn_A Spermidine synthase; am 99.3 1.3E-11 4.4E-16 79.4 7.2 62 47-108 82-150 (294)
219 3gjy_A Spermidine synthase; AP 99.3 1.7E-11 5.7E-16 79.5 7.6 61 48-108 89-151 (317)
220 2b9e_A NOL1/NOP2/SUN domain fa 99.3 4E-11 1.4E-15 77.6 9.3 66 45-110 99-167 (309)
221 2ip2_A Probable phenazine-spec 99.3 2.8E-11 9.6E-16 78.8 8.4 74 37-113 157-233 (334)
222 3cbg_A O-methyltransferase; cy 99.2 2E-11 6.7E-16 76.0 6.8 72 33-107 60-135 (232)
223 2frx_A Hypothetical protein YE 99.2 2.8E-11 9.5E-16 82.5 8.0 62 48-109 117-181 (479)
224 3m4x_A NOL1/NOP2/SUN family pr 99.2 1.4E-11 4.7E-16 83.4 6.4 65 45-109 102-169 (456)
225 3i53_A O-methyltransferase; CO 99.2 4E-11 1.4E-15 78.1 8.4 65 45-111 166-233 (332)
226 2yxl_A PH0851 protein, 450AA l 99.2 5.7E-11 1.9E-15 80.4 9.3 67 43-109 254-323 (450)
227 3m6w_A RRNA methylase; rRNA me 99.2 1.5E-11 5.3E-16 83.3 6.4 65 45-109 98-164 (464)
228 1mjf_A Spermidine synthase; sp 99.2 2.6E-11 8.8E-16 77.6 7.0 60 47-107 74-145 (281)
229 2okc_A Type I restriction enzy 99.2 2.9E-11 9.8E-16 81.7 7.3 86 23-112 150-252 (445)
230 1iy9_A Spermidine synthase; ro 99.2 3.7E-11 1.3E-15 76.6 7.1 61 47-107 74-140 (275)
231 2dul_A N(2),N(2)-dimethylguano 99.2 5.6E-11 1.9E-15 78.9 8.1 61 48-108 47-124 (378)
232 3dou_A Ribosomal RNA large sub 99.2 1.2E-10 4.2E-15 70.5 9.0 62 37-109 13-75 (191)
233 1sqg_A SUN protein, FMU protei 99.2 9.3E-11 3.2E-15 78.9 8.8 68 42-109 240-308 (429)
234 1xj5_A Spermidine synthase 1; 99.2 4.4E-11 1.5E-15 78.2 6.7 62 47-108 119-186 (334)
235 2wa2_A Non-structural protein 99.2 6.1E-12 2.1E-16 80.3 2.5 70 37-109 71-145 (276)
236 3hp7_A Hemolysin, putative; st 99.2 3.6E-11 1.2E-15 77.1 6.1 53 37-89 73-126 (291)
237 3cc8_A Putative methyltransfer 99.2 1E-10 3.5E-15 72.0 8.0 65 39-111 24-90 (230)
238 2pt6_A Spermidine synthase; tr 99.2 5.8E-11 2E-15 77.2 7.0 61 47-107 115-181 (321)
239 1inl_A Spermidine synthase; be 99.2 5.5E-11 1.9E-15 76.6 6.5 60 48-107 90-155 (296)
240 3bwc_A Spermidine synthase; SA 99.2 6.1E-11 2.1E-15 76.6 6.6 63 47-109 94-162 (304)
241 2oxt_A Nucleoside-2'-O-methylt 99.2 8.8E-12 3E-16 79.1 2.6 70 37-109 63-137 (265)
242 1uir_A Polyamine aminopropyltr 99.2 5.4E-11 1.9E-15 77.1 6.3 62 47-108 76-144 (314)
243 2ih2_A Modification methylase 99.2 5.6E-11 1.9E-15 79.4 6.5 81 21-113 16-98 (421)
244 2o07_A Spermidine synthase; st 99.2 6.9E-11 2.4E-15 76.4 6.6 61 47-107 94-160 (304)
245 1vlm_A SAM-dependent methyltra 99.2 1.9E-10 6.6E-15 70.7 8.4 53 49-112 48-100 (219)
246 3axs_A Probable N(2),N(2)-dime 99.2 5.5E-11 1.9E-15 79.1 6.1 61 48-108 52-117 (392)
247 2b2c_A Spermidine synthase; be 99.2 7E-11 2.4E-15 76.7 6.3 60 48-107 108-173 (314)
248 2i7c_A Spermidine synthase; tr 99.1 1.2E-10 4E-15 74.6 6.7 62 47-108 77-144 (283)
249 3v97_A Ribosomal RNA large sub 99.1 3.8E-10 1.3E-14 80.0 9.8 80 31-110 173-297 (703)
250 1af7_A Chemotaxis receptor met 99.1 6.3E-10 2.2E-14 70.9 8.8 64 48-111 105-209 (274)
251 3giw_A Protein of unknown func 99.1 4.5E-10 1.6E-14 71.4 8.0 74 35-108 64-143 (277)
252 2cmg_A Spermidine synthase; tr 99.1 8.6E-11 3E-15 74.5 4.5 62 47-109 71-137 (262)
253 2aot_A HMT, histamine N-methyl 99.1 1.6E-10 5.6E-15 74.0 5.3 63 47-109 51-124 (292)
254 2plw_A Ribosomal RNA methyltra 99.1 6.6E-10 2.3E-14 67.3 7.7 53 47-109 21-76 (201)
255 4e2x_A TCAB9; kijanose, tetron 99.1 4.1E-10 1.4E-14 75.3 7.3 57 33-90 92-148 (416)
256 4a6d_A Hydroxyindole O-methylt 99.1 1.4E-09 4.8E-14 71.5 9.5 74 38-112 169-244 (353)
257 1ej0_A FTSJ; methyltransferase 99.1 3.5E-10 1.2E-14 66.8 5.7 60 40-109 13-75 (180)
258 1wg8_A Predicted S-adenosylmet 99.1 8.4E-10 2.9E-14 70.2 7.7 68 38-109 12-79 (285)
259 2oyr_A UPF0341 protein YHIQ; a 99.0 1.7E-10 5.8E-15 72.9 4.2 68 40-108 78-157 (258)
260 2qfm_A Spermine synthase; sper 99.0 5.3E-10 1.8E-14 73.5 6.6 61 48-108 188-257 (364)
261 3reo_A (ISO)eugenol O-methyltr 99.0 6E-10 2E-14 73.6 6.7 68 37-111 191-260 (368)
262 2zig_A TTHA0409, putative modi 99.0 1.8E-09 6E-14 69.5 8.5 59 34-94 222-280 (297)
263 4gqb_A Protein arginine N-meth 99.0 6E-10 2E-14 78.0 6.7 65 48-113 357-428 (637)
264 3p9c_A Caffeic acid O-methyltr 99.0 9.3E-10 3.2E-14 72.6 7.2 68 37-111 189-258 (364)
265 3lkd_A Type I restriction-modi 99.0 2.8E-09 9.6E-14 73.6 9.7 88 21-108 194-288 (542)
266 3sso_A Methyltransferase; macr 99.0 4.8E-10 1.6E-14 74.7 4.8 67 36-111 205-279 (419)
267 1i4w_A Mitochondrial replicati 99.0 3.4E-09 1.2E-13 69.7 8.4 60 48-109 58-118 (353)
268 3lst_A CALO1 methyltransferase 99.0 1.5E-09 5E-14 71.2 6.3 66 38-106 174-242 (348)
269 1fp1_D Isoliquiritigenin 2'-O- 99.0 2E-09 7E-14 71.1 7.0 68 38-112 198-267 (372)
270 2nyu_A Putative ribosomal RNA 98.9 3.4E-09 1.2E-13 63.9 7.2 53 46-108 20-83 (196)
271 1fp2_A Isoflavone O-methyltran 98.9 1.6E-09 5.4E-14 71.1 5.3 58 47-111 187-245 (352)
272 2ar0_A M.ecoki, type I restric 98.9 2.9E-09 9.9E-14 73.6 6.6 83 23-109 148-255 (541)
273 2p41_A Type II methyltransfera 98.9 1.6E-09 5.4E-14 70.1 4.4 66 40-109 74-145 (305)
274 2zfu_A Nucleomethylin, cerebra 98.9 2.7E-09 9.2E-14 65.3 5.1 48 47-112 66-113 (215)
275 2k4m_A TR8_protein, UPF0146 pr 98.9 9.6E-09 3.3E-13 59.4 6.9 54 30-85 19-73 (153)
276 1g60_A Adenine-specific methyl 98.8 2.8E-08 9.7E-13 62.8 7.9 60 34-95 199-258 (260)
277 2xyq_A Putative 2'-O-methyl tr 98.8 1.6E-08 5.5E-13 64.9 6.7 56 45-114 60-124 (290)
278 3s1s_A Restriction endonucleas 98.7 1.5E-07 5E-12 67.6 10.2 88 20-107 291-391 (878)
279 1zg3_A Isoflavanone 4'-O-methy 98.7 1.5E-08 5E-13 66.7 4.9 57 48-111 193-250 (358)
280 3cvo_A Methyltransferase-like 98.7 2.3E-07 7.9E-12 56.6 9.7 58 48-107 30-91 (202)
281 3ua3_A Protein arginine N-meth 98.7 4.3E-08 1.5E-12 69.2 6.6 61 49-110 410-486 (745)
282 3khk_A Type I restriction-modi 98.7 2E-08 6.9E-13 69.5 4.5 83 22-109 223-323 (544)
283 3ufb_A Type I restriction-modi 98.6 1E-07 3.5E-12 65.8 7.2 85 22-110 195-294 (530)
284 3tka_A Ribosomal RNA small sub 98.6 2.2E-07 7.4E-12 60.6 6.7 71 35-108 44-116 (347)
285 4auk_A Ribosomal RNA large sub 98.5 9.6E-07 3.3E-11 58.3 8.3 60 46-112 209-268 (375)
286 1boo_A Protein (N-4 cytosine-s 98.5 8.3E-08 2.8E-12 62.5 2.8 71 35-107 240-310 (323)
287 3o4f_A Spermidine synthase; am 98.3 5.9E-06 2E-10 53.1 8.1 62 47-108 82-150 (294)
288 4fzv_A Putative methyltransfer 98.3 2E-06 6.8E-11 56.8 6.0 65 45-109 145-217 (359)
289 1g55_A DNA cytosine methyltran 98.2 3.1E-06 1.1E-10 55.5 5.7 57 49-109 2-60 (343)
290 3gcz_A Polyprotein; flavivirus 98.2 3.2E-06 1.1E-10 53.8 5.5 53 31-83 73-126 (282)
291 1eg2_A Modification methylase 98.2 6.3E-06 2.2E-10 53.6 7.0 60 34-95 229-291 (319)
292 3p8z_A Mtase, non-structural p 98.1 5.8E-06 2E-10 51.5 5.7 78 31-109 61-141 (267)
293 3g7u_A Cytosine-specific methy 98.1 8.7E-06 3E-10 54.1 6.8 56 50-109 3-58 (376)
294 3lkz_A Non-structural protein 98.1 5E-06 1.7E-10 53.3 5.2 51 32-82 78-129 (321)
295 2ld4_A Anamorsin; methyltransf 98.1 1.1E-06 3.8E-11 52.0 2.1 48 45-110 9-56 (176)
296 3evf_A RNA-directed RNA polyme 98.1 9.5E-06 3.3E-10 51.5 5.7 51 33-83 59-110 (277)
297 3c6k_A Spermine synthase; sper 98.0 1.6E-05 5.3E-10 52.8 6.1 59 48-106 205-272 (381)
298 2qy6_A UPF0209 protein YFCK; s 98.0 1.1E-05 3.7E-10 51.0 5.1 60 48-107 60-161 (257)
299 2c7p_A Modification methylase 97.9 3.3E-05 1.1E-09 50.4 6.9 56 48-109 10-65 (327)
300 2py6_A Methyltransferase FKBM; 97.9 5.9E-05 2E-09 50.6 7.7 60 47-106 225-292 (409)
301 2wk1_A NOVP; transferase, O-me 97.9 8.9E-05 3E-09 47.5 8.1 61 47-107 105-200 (282)
302 3ubt_Y Modification methylase 97.9 5.7E-05 2E-09 49.0 6.9 56 50-110 1-56 (331)
303 2qrv_A DNA (cytosine-5)-methyl 97.8 0.00014 4.8E-09 46.8 7.8 59 47-109 14-74 (295)
304 3eld_A Methyltransferase; flav 97.7 0.0001 3.5E-09 47.3 5.5 47 36-82 69-116 (300)
305 4h0n_A DNMT2; SAH binding, tra 97.6 0.00018 6.3E-09 47.0 6.2 56 50-109 4-61 (333)
306 3qv2_A 5-cytosine DNA methyltr 97.6 0.0002 6.8E-09 46.8 6.3 57 48-109 9-68 (327)
307 2oo3_A Protein involved in cat 97.6 5.6E-05 1.9E-09 48.3 3.3 57 48-106 91-147 (283)
308 3me5_A Cytosine-specific methy 97.5 0.00027 9.3E-09 48.4 6.0 60 49-109 88-147 (482)
309 2px2_A Genome polyprotein [con 97.4 0.00042 1.4E-08 43.7 5.4 40 30-69 55-94 (269)
310 3b5i_A S-adenosyl-L-methionine 97.1 0.0034 1.2E-07 41.7 8.1 44 49-92 53-112 (374)
311 4ft4_B DNA (cytosine-5)-methyl 96.7 0.0012 4.2E-08 47.6 3.5 56 48-107 211-272 (784)
312 4fn4_A Short chain dehydrogena 96.7 0.013 4.4E-07 36.9 7.5 61 47-108 5-68 (254)
313 3swr_A DNA (cytosine-5)-methyl 96.6 0.0035 1.2E-07 46.6 5.5 54 48-105 539-593 (1002)
314 1zkd_A DUF185; NESG, RPR58, st 96.4 0.04 1.4E-06 36.8 9.1 49 45-93 77-133 (387)
315 1rjd_A PPM1P, carboxy methyl t 96.0 0.046 1.6E-06 35.8 7.6 61 48-109 97-180 (334)
316 3s2e_A Zinc-containing alcohol 96.0 0.039 1.3E-06 35.8 7.3 50 41-90 159-209 (340)
317 2dph_A Formaldehyde dismutase; 96.0 0.017 5.8E-07 38.4 5.7 48 42-89 179-228 (398)
318 3av4_A DNA (cytosine-5)-methyl 95.8 0.016 5.4E-07 44.4 5.4 45 48-92 850-895 (1330)
319 3ucx_A Short chain dehydrogena 95.8 0.12 4.2E-06 32.2 8.8 61 47-108 9-72 (264)
320 3h7a_A Short chain dehydrogena 95.8 0.067 2.3E-06 33.2 7.4 60 48-108 6-68 (252)
321 1f8f_A Benzyl alcohol dehydrog 95.7 0.027 9.3E-07 37.0 5.8 49 42-90 184-234 (371)
322 4g81_D Putative hexonate dehyd 95.6 0.037 1.3E-06 34.9 5.8 60 48-108 8-70 (255)
323 1pl8_A Human sorbitol dehydrog 95.6 0.042 1.4E-06 36.0 6.2 49 42-90 165-215 (356)
324 2uyo_A Hypothetical protein ML 95.5 0.087 3E-06 34.1 7.4 58 49-107 103-164 (310)
325 3qiv_A Short-chain dehydrogena 95.5 0.11 3.7E-06 32.1 7.7 59 48-108 8-70 (253)
326 4fs3_A Enoyl-[acyl-carrier-pro 95.5 0.11 3.7E-06 32.4 7.7 61 47-108 4-70 (256)
327 3two_A Mannitol dehydrogenase; 95.5 0.05 1.7E-06 35.4 6.3 50 41-90 169-219 (348)
328 4dkj_A Cytosine-specific methy 95.4 0.02 6.8E-07 38.5 4.3 46 48-93 9-60 (403)
329 3tjr_A Short chain dehydrogena 95.4 0.12 4.2E-06 32.9 7.9 61 47-108 29-92 (301)
330 3imf_A Short chain dehydrogena 95.4 0.12 4.1E-06 32.1 7.6 59 48-108 5-67 (257)
331 3fwz_A Inner membrane protein 95.4 0.09 3.1E-06 29.6 6.5 52 50-107 8-60 (140)
332 1uuf_A YAHK, zinc-type alcohol 95.4 0.071 2.4E-06 35.1 6.9 47 44-90 190-237 (369)
333 1kol_A Formaldehyde dehydrogen 95.4 0.072 2.4E-06 35.4 6.9 47 43-89 180-228 (398)
334 2efj_A 3,7-dimethylxanthine me 95.4 0.025 8.5E-07 37.8 4.5 20 49-68 53-72 (384)
335 3o38_A Short chain dehydrogena 95.3 0.21 7.3E-06 31.0 8.5 60 48-108 21-85 (266)
336 3v8b_A Putative dehydrogenase, 95.3 0.17 5.6E-06 32.1 8.1 60 48-108 27-89 (283)
337 4f3n_A Uncharacterized ACR, CO 95.3 0.042 1.5E-06 37.2 5.4 70 23-92 108-187 (432)
338 3sju_A Keto reductase; short-c 95.2 0.15 5.1E-06 32.2 7.7 60 48-108 23-85 (279)
339 3gaf_A 7-alpha-hydroxysteroid 95.2 0.15 5.1E-06 31.7 7.7 60 48-108 11-73 (256)
340 3rkr_A Short chain oxidoreduct 95.2 0.12 4.1E-06 32.2 7.2 60 47-108 27-90 (262)
341 3lyl_A 3-oxoacyl-(acyl-carrier 95.1 0.15 5.2E-06 31.3 7.4 59 48-108 4-66 (247)
342 3r1i_A Short-chain type dehydr 95.0 0.17 5.7E-06 31.9 7.4 61 47-108 30-93 (276)
343 3fpc_A NADP-dependent alcohol 95.0 0.099 3.4E-06 34.1 6.6 49 42-90 160-210 (352)
344 3tfo_A Putative 3-oxoacyl-(acy 95.0 0.15 5.2E-06 32.0 7.1 59 48-108 3-65 (264)
345 3iht_A S-adenosyl-L-methionine 95.0 0.19 6.4E-06 29.5 6.8 45 34-79 27-72 (174)
346 1e3j_A NADP(H)-dependent ketos 94.9 0.091 3.1E-06 34.3 6.2 48 42-89 162-210 (352)
347 4imr_A 3-oxoacyl-(acyl-carrier 94.9 0.14 4.8E-06 32.3 6.9 60 48-109 32-95 (275)
348 1m6e_X S-adenosyl-L-methionnin 94.9 0.013 4.6E-07 38.7 2.2 46 48-93 51-113 (359)
349 3t7c_A Carveol dehydrogenase; 94.9 0.27 9.1E-06 31.3 8.2 61 47-108 26-101 (299)
350 3llv_A Exopolyphosphatase-rela 94.9 0.11 3.9E-06 29.1 5.9 51 49-107 6-59 (141)
351 1cdo_A Alcohol dehydrogenase; 94.9 0.094 3.2E-06 34.5 6.2 48 42-89 186-235 (374)
352 4g65_A TRK system potassium up 94.8 0.067 2.3E-06 36.5 5.6 54 48-108 2-58 (461)
353 3uve_A Carveol dehydrogenase ( 94.8 0.31 1.1E-05 30.7 8.3 60 48-108 10-88 (286)
354 3pgx_A Carveol dehydrogenase; 94.8 0.32 1.1E-05 30.6 8.3 61 47-108 13-89 (280)
355 3awd_A GOX2181, putative polyo 94.8 0.27 9.3E-06 30.3 7.9 59 48-108 12-74 (260)
356 1e3i_A Alcohol dehydrogenase, 94.7 0.1 3.6E-06 34.3 6.2 48 42-89 189-238 (376)
357 1yb1_A 17-beta-hydroxysteroid 94.7 0.28 9.5E-06 30.7 7.9 59 48-108 30-92 (272)
358 3uog_A Alcohol dehydrogenase; 94.7 0.095 3.2E-06 34.4 5.9 49 42-90 183-232 (363)
359 2jhf_A Alcohol dehydrogenase E 94.7 0.11 3.9E-06 34.1 6.2 48 42-89 185-234 (374)
360 2jah_A Clavulanic acid dehydro 94.6 0.32 1.1E-05 30.0 7.9 59 48-108 6-68 (247)
361 1zem_A Xylitol dehydrogenase; 94.6 0.31 1.1E-05 30.3 7.9 59 48-108 6-68 (262)
362 3pxx_A Carveol dehydrogenase; 94.6 0.29 9.8E-06 30.7 7.8 60 48-108 9-83 (287)
363 3o26_A Salutaridine reductase; 94.6 0.24 8.1E-06 31.3 7.5 59 48-108 11-74 (311)
364 3m6i_A L-arabinitol 4-dehydrog 94.6 0.14 4.9E-06 33.5 6.5 49 42-90 173-223 (363)
365 3sx2_A Putative 3-ketoacyl-(ac 94.6 0.31 1.1E-05 30.5 7.9 61 47-108 11-86 (278)
366 1p0f_A NADP-dependent alcohol 94.6 0.086 2.9E-06 34.7 5.5 48 42-89 185-234 (373)
367 1ae1_A Tropinone reductase-I; 94.5 0.33 1.1E-05 30.4 7.9 59 48-108 20-82 (273)
368 2rhc_B Actinorhodin polyketide 94.5 0.33 1.1E-05 30.5 7.9 59 48-108 21-83 (277)
369 3tox_A Short chain dehydrogena 94.5 0.13 4.5E-06 32.5 6.0 60 48-108 7-69 (280)
370 3svt_A Short-chain type dehydr 94.5 0.37 1.3E-05 30.3 8.1 60 48-108 10-75 (281)
371 3gms_A Putative NADPH:quinone 94.5 0.065 2.2E-06 34.8 4.7 49 42-90 138-188 (340)
372 4da9_A Short-chain dehydrogena 94.4 0.39 1.3E-05 30.3 8.1 62 47-109 27-92 (280)
373 3uko_A Alcohol dehydrogenase c 94.4 0.064 2.2E-06 35.4 4.6 48 42-89 187-236 (378)
374 2ae2_A Protein (tropinone redu 94.4 0.34 1.2E-05 30.0 7.7 59 48-108 8-70 (260)
375 4egf_A L-xylulose reductase; s 94.4 0.28 9.7E-06 30.6 7.3 60 48-109 19-83 (266)
376 3ioy_A Short-chain dehydrogena 94.3 0.42 1.4E-05 30.8 8.2 60 48-108 7-71 (319)
377 1piw_A Hypothetical zinc-type 94.3 0.12 4E-06 33.9 5.7 48 43-90 174-222 (360)
378 3pk0_A Short-chain dehydrogena 94.3 0.31 1.1E-05 30.3 7.5 59 48-108 9-72 (262)
379 1pqw_A Polyketide synthase; ro 94.3 0.054 1.9E-06 32.2 3.8 45 44-89 34-81 (198)
380 3ftp_A 3-oxoacyl-[acyl-carrier 94.3 0.26 9E-06 30.9 7.1 59 48-108 27-89 (270)
381 2hcy_A Alcohol dehydrogenase 1 94.3 0.14 4.9E-06 33.3 6.0 48 42-89 163-212 (347)
382 3tsc_A Putative oxidoreductase 94.2 0.49 1.7E-05 29.7 8.2 60 48-108 10-85 (277)
383 1rjw_A ADH-HT, alcohol dehydro 94.2 0.27 9.1E-06 31.9 7.2 46 44-89 160-206 (339)
384 2fzw_A Alcohol dehydrogenase c 94.2 0.12 4.3E-06 33.9 5.6 49 42-90 184-234 (373)
385 1v3u_A Leukotriene B4 12- hydr 94.2 0.13 4.4E-06 33.2 5.6 48 42-89 139-188 (333)
386 3cxt_A Dehydrogenase with diff 94.1 0.39 1.3E-05 30.5 7.7 59 48-108 33-95 (291)
387 3oec_A Carveol dehydrogenase ( 94.1 0.4 1.4E-05 30.8 7.8 61 47-108 44-119 (317)
388 1iy8_A Levodione reductase; ox 94.1 0.39 1.3E-05 29.9 7.6 59 48-108 12-76 (267)
389 4ibo_A Gluconate dehydrogenase 94.1 0.16 5.3E-06 32.0 5.8 59 48-108 25-87 (271)
390 4ej6_A Putative zinc-binding d 94.1 0.18 6E-06 33.2 6.2 49 42-90 176-226 (370)
391 2qq5_A DHRS1, dehydrogenase/re 94.1 0.27 9.2E-06 30.5 6.8 59 48-108 4-66 (260)
392 3rih_A Short chain dehydrogena 94.1 0.29 1E-05 31.1 7.0 59 48-108 40-103 (293)
393 2h6e_A ADH-4, D-arabinose 1-de 94.0 0.15 5E-06 33.2 5.7 45 45-90 168-215 (344)
394 3l9w_A Glutathione-regulated p 94.0 0.1 3.5E-06 35.1 5.0 53 48-108 3-58 (413)
395 3lf2_A Short chain oxidoreduct 93.9 0.56 1.9E-05 29.2 8.1 60 48-108 7-71 (265)
396 1jvb_A NAD(H)-dependent alcoho 93.9 0.2 6.7E-06 32.6 6.1 49 42-90 164-215 (347)
397 3jv7_A ADH-A; dehydrogenase, n 93.9 0.17 6E-06 32.8 5.9 46 45-90 168-215 (345)
398 1vj0_A Alcohol dehydrogenase, 93.9 0.24 8.1E-06 32.7 6.5 48 42-89 188-238 (380)
399 3l77_A Short-chain alcohol deh 93.9 0.51 1.8E-05 28.7 7.7 58 49-108 2-64 (235)
400 3ai3_A NADPH-sorbose reductase 93.9 0.48 1.7E-05 29.4 7.7 59 48-108 6-69 (263)
401 3edm_A Short chain dehydrogena 93.8 0.48 1.6E-05 29.4 7.5 60 48-108 7-70 (259)
402 4fgs_A Probable dehydrogenase 93.7 0.57 2E-05 29.7 7.8 58 47-108 27-87 (273)
403 3s55_A Putative short-chain de 93.7 0.57 1.9E-05 29.4 7.9 61 47-108 8-83 (281)
404 4b7c_A Probable oxidoreductase 93.7 0.13 4.3E-06 33.3 4.9 47 42-88 143-191 (336)
405 3goh_A Alcohol dehydrogenase, 93.6 0.11 3.6E-06 33.4 4.4 48 42-90 136-184 (315)
406 2zat_A Dehydrogenase/reductase 93.6 0.52 1.8E-05 29.2 7.5 58 48-107 13-74 (260)
407 4iin_A 3-ketoacyl-acyl carrier 93.6 0.47 1.6E-05 29.6 7.3 60 47-108 27-91 (271)
408 3r24_A NSP16, 2'-O-methyl tran 93.6 0.23 7.7E-06 32.3 5.7 47 35-83 95-150 (344)
409 1xkq_A Short-chain reductase f 93.6 0.48 1.7E-05 29.7 7.3 59 48-108 5-70 (280)
410 1e7w_A Pteridine reductase; di 93.6 0.55 1.9E-05 29.7 7.6 60 48-109 8-73 (291)
411 1geg_A Acetoin reductase; SDR 93.6 0.64 2.2E-05 28.7 7.8 57 50-108 3-63 (256)
412 3oid_A Enoyl-[acyl-carrier-pro 93.6 0.52 1.8E-05 29.3 7.4 59 48-108 3-66 (258)
413 1fmc_A 7 alpha-hydroxysteroid 93.6 0.46 1.6E-05 29.1 7.1 59 48-108 10-72 (255)
414 2c0c_A Zinc binding alcohol de 93.6 0.3 1E-05 32.0 6.5 46 44-89 159-206 (362)
415 4dmm_A 3-oxoacyl-[acyl-carrier 93.6 0.56 1.9E-05 29.4 7.6 59 48-108 27-90 (269)
416 1wma_A Carbonyl reductase [NAD 93.5 0.53 1.8E-05 29.1 7.4 60 48-108 3-66 (276)
417 2eih_A Alcohol dehydrogenase; 93.5 0.22 7.4E-06 32.4 5.7 45 45-89 163-209 (343)
418 3ppi_A 3-hydroxyacyl-COA dehyd 93.5 0.55 1.9E-05 29.4 7.5 56 48-108 29-88 (281)
419 3ijr_A Oxidoreductase, short c 93.5 0.76 2.6E-05 29.1 8.2 59 48-108 46-109 (291)
420 1id1_A Putative potassium chan 93.4 0.45 1.5E-05 27.0 6.5 54 49-107 3-60 (153)
421 1xu9_A Corticosteroid 11-beta- 93.4 0.44 1.5E-05 30.0 6.9 59 48-108 27-90 (286)
422 1vl8_A Gluconate 5-dehydrogena 93.4 0.78 2.7E-05 28.6 8.0 60 47-108 19-83 (267)
423 3uf0_A Short-chain dehydrogena 93.4 0.71 2.4E-05 29.0 7.8 60 47-108 29-91 (273)
424 1h2b_A Alcohol dehydrogenase; 93.3 0.29 9.8E-06 32.0 6.2 46 44-89 182-229 (359)
425 3ip1_A Alcohol dehydrogenase, 93.3 0.21 7.3E-06 33.2 5.6 46 45-90 210-257 (404)
426 3a28_C L-2.3-butanediol dehydr 93.3 0.66 2.3E-05 28.7 7.5 57 50-108 3-65 (258)
427 4a2c_A Galactitol-1-phosphate 93.3 0.37 1.3E-05 31.2 6.6 51 40-90 152-204 (346)
428 2j3h_A NADP-dependent oxidored 93.3 0.17 5.9E-06 32.8 5.0 48 42-89 149-198 (345)
429 4eez_A Alcohol dehydrogenase 1 93.3 0.43 1.5E-05 30.9 6.9 51 41-91 156-208 (348)
430 3oig_A Enoyl-[acyl-carrier-pro 93.2 0.9 3.1E-05 28.2 8.5 61 48-109 6-72 (266)
431 2uvd_A 3-oxoacyl-(acyl-carrier 93.2 0.63 2.2E-05 28.6 7.3 59 48-108 3-66 (246)
432 1lss_A TRK system potassium up 93.2 0.49 1.7E-05 26.0 6.3 38 49-89 4-45 (140)
433 1xq1_A Putative tropinone redu 93.1 0.63 2.1E-05 28.8 7.3 59 48-108 13-75 (266)
434 1w6u_A 2,4-dienoyl-COA reducta 93.1 0.66 2.3E-05 29.3 7.5 59 48-108 25-88 (302)
435 3c85_A Putative glutathione-re 93.1 0.23 7.9E-06 29.1 5.0 49 49-106 39-92 (183)
436 3nyw_A Putative oxidoreductase 93.1 0.72 2.4E-05 28.5 7.5 60 48-108 6-71 (250)
437 3gvc_A Oxidoreductase, probabl 93.1 0.79 2.7E-05 28.8 7.7 57 48-108 28-87 (277)
438 4eye_A Probable oxidoreductase 93.0 0.22 7.5E-06 32.4 5.2 49 42-90 153-203 (342)
439 2b4q_A Rhamnolipids biosynthes 93.0 0.52 1.8E-05 29.6 6.8 58 48-108 28-89 (276)
440 3afn_B Carbonyl reductase; alp 93.0 0.51 1.7E-05 28.9 6.6 59 48-108 6-69 (258)
441 1xhl_A Short-chain dehydrogena 92.9 0.65 2.2E-05 29.5 7.2 59 48-108 25-90 (297)
442 4eso_A Putative oxidoreductase 92.9 0.99 3.4E-05 27.9 8.1 58 47-108 6-66 (255)
443 2qhx_A Pteridine reductase 1; 92.9 0.75 2.6E-05 29.7 7.6 60 48-109 45-110 (328)
444 3qlj_A Short chain dehydrogena 92.9 0.52 1.8E-05 30.3 6.8 59 48-108 26-98 (322)
445 2d8a_A PH0655, probable L-thre 92.8 0.27 9.3E-06 32.0 5.4 48 42-90 162-211 (348)
446 1yxm_A Pecra, peroxisomal tran 92.8 0.98 3.3E-05 28.5 7.9 59 48-108 17-84 (303)
447 3sc4_A Short chain dehydrogena 92.7 0.53 1.8E-05 29.7 6.5 60 48-108 8-77 (285)
448 4dvj_A Putative zinc-dependent 92.7 0.26 8.9E-06 32.4 5.2 42 48-89 171-215 (363)
449 2c07_A 3-oxoacyl-(acyl-carrier 92.7 0.85 2.9E-05 28.7 7.5 60 48-108 43-105 (285)
450 2bd0_A Sepiapterin reductase; 92.6 0.83 2.9E-05 27.8 7.3 58 50-108 3-70 (244)
451 3qwb_A Probable quinone oxidor 92.6 0.26 9E-06 31.8 5.2 46 45-90 145-192 (334)
452 1ja9_A 4HNR, 1,3,6,8-tetrahydr 92.6 0.82 2.8E-05 28.3 7.3 59 48-108 20-83 (274)
453 1mxh_A Pteridine reductase 2; 92.6 0.72 2.5E-05 28.8 7.0 59 48-108 10-74 (276)
454 3rwb_A TPLDH, pyridoxal 4-dehy 92.6 0.81 2.8E-05 28.2 7.1 57 48-108 5-64 (247)
455 4fc7_A Peroxisomal 2,4-dienoyl 92.5 0.75 2.6E-05 28.8 7.1 60 48-108 26-89 (277)
456 3f1l_A Uncharacterized oxidore 92.5 0.77 2.6E-05 28.3 7.0 56 48-105 11-71 (252)
457 3ctm_A Carbonyl reductase; alc 92.5 0.61 2.1E-05 29.1 6.6 59 48-108 33-95 (279)
458 1yb5_A Quinone oxidoreductase; 92.5 0.36 1.2E-05 31.5 5.7 47 43-89 165-213 (351)
459 4dry_A 3-oxoacyl-[acyl-carrier 92.5 0.44 1.5E-05 30.1 5.9 59 48-108 32-95 (281)
460 3jyn_A Quinone oxidoreductase; 92.4 0.23 7.9E-06 32.0 4.7 47 44-90 136-184 (325)
461 1iz0_A Quinone oxidoreductase; 92.4 0.23 7.9E-06 31.6 4.6 44 46-89 123-168 (302)
462 3k31_A Enoyl-(acyl-carrier-pro 92.4 0.64 2.2E-05 29.5 6.7 59 48-108 29-92 (296)
463 1wly_A CAAR, 2-haloacrylate re 92.4 0.5 1.7E-05 30.5 6.2 47 43-89 140-188 (333)
464 3ek2_A Enoyl-(acyl-carrier-pro 92.4 1.2 4.1E-05 27.5 7.9 60 47-108 12-76 (271)
465 2z1n_A Dehydrogenase; reductas 92.4 1.1 3.7E-05 27.8 7.6 59 48-108 6-70 (260)
466 2cfc_A 2-(R)-hydroxypropyl-COM 92.4 0.99 3.4E-05 27.5 7.4 57 50-108 3-64 (250)
467 1gee_A Glucose 1-dehydrogenase 92.3 0.86 2.9E-05 28.1 7.1 59 48-108 6-69 (261)
468 4hp8_A 2-deoxy-D-gluconate 3-d 92.2 1.3 4.3E-05 27.8 7.7 60 47-109 7-69 (247)
469 2pd6_A Estradiol 17-beta-dehyd 92.2 0.8 2.7E-05 28.2 6.8 59 48-108 6-75 (264)
470 3is3_A 17BETA-hydroxysteroid d 92.2 1.3 4.4E-05 27.6 7.9 60 48-108 17-80 (270)
471 3grk_A Enoyl-(acyl-carrier-pro 92.2 1.3 4.6E-05 28.0 8.0 60 47-108 29-93 (293)
472 2x9g_A PTR1, pteridine reducta 92.2 0.88 3E-05 28.7 7.1 58 48-107 22-85 (288)
473 1xg5_A ARPG836; short chain de 92.2 1.2 4.1E-05 27.8 7.7 59 48-108 31-95 (279)
474 2cf5_A Atccad5, CAD, cinnamyl 92.2 0.47 1.6E-05 31.0 5.9 46 43-88 174-221 (357)
475 3i1j_A Oxidoreductase, short c 92.1 1.1 3.8E-05 27.3 7.4 56 48-105 13-73 (247)
476 2hq1_A Glucose/ribitol dehydro 92.1 0.96 3.3E-05 27.5 7.1 59 48-108 4-67 (247)
477 4e6p_A Probable sorbitol dehyd 92.1 1.2 4.2E-05 27.5 7.6 56 48-108 7-66 (259)
478 3ged_A Short-chain dehydrogena 92.1 0.74 2.5E-05 28.8 6.5 54 50-108 3-59 (247)
479 1spx_A Short-chain reductase f 92.1 0.77 2.6E-05 28.7 6.7 59 48-108 5-70 (278)
480 3f9i_A 3-oxoacyl-[acyl-carrier 92.1 1.1 3.9E-05 27.3 7.4 56 47-107 12-71 (249)
481 4gkb_A 3-oxoacyl-[acyl-carrier 92.0 1 3.4E-05 28.3 7.1 60 47-108 5-67 (258)
482 3l4b_C TRKA K+ channel protien 92.0 0.45 1.5E-05 28.7 5.4 50 51-107 2-54 (218)
483 3zv4_A CIS-2,3-dihydrobiphenyl 91.9 1.3 4.4E-05 27.9 7.6 57 48-108 4-63 (281)
484 3r3s_A Oxidoreductase; structu 91.9 0.73 2.5E-05 29.2 6.5 59 48-108 48-112 (294)
485 2pnf_A 3-oxoacyl-[acyl-carrier 91.9 0.99 3.4E-05 27.5 6.9 59 48-108 6-69 (248)
486 1x1t_A D(-)-3-hydroxybutyrate 91.8 0.72 2.5E-05 28.6 6.3 59 48-108 3-67 (260)
487 3n74_A 3-ketoacyl-(acyl-carrie 91.8 1.4 4.8E-05 27.2 7.6 57 48-108 8-67 (261)
488 3v2h_A D-beta-hydroxybutyrate 91.7 1.3 4.4E-05 27.9 7.5 60 48-108 24-88 (281)
489 3e03_A Short chain dehydrogena 91.7 0.98 3.4E-05 28.3 6.9 60 48-108 5-74 (274)
490 3osu_A 3-oxoacyl-[acyl-carrier 91.7 1.3 4.6E-05 27.1 7.4 59 48-108 3-66 (246)
491 3fbg_A Putative arginate lyase 91.6 0.63 2.2E-05 30.2 6.1 43 48-90 150-194 (346)
492 3tzq_B Short-chain type dehydr 91.6 1.1 3.8E-05 28.0 7.0 57 48-108 10-69 (271)
493 3t4x_A Oxidoreductase, short c 91.6 1.1 3.8E-05 27.9 7.0 58 48-107 9-72 (267)
494 1oaa_A Sepiapterin reductase; 91.6 0.72 2.5E-05 28.5 6.1 60 48-108 5-72 (259)
495 1qor_A Quinone oxidoreductase; 91.6 0.3 1E-05 31.4 4.5 46 43-89 135-183 (327)
496 2j8z_A Quinone oxidoreductase; 91.6 0.37 1.3E-05 31.5 4.9 47 43-89 157-205 (354)
497 3l6e_A Oxidoreductase, short-c 91.5 1.5 5E-05 26.8 7.7 55 49-108 3-61 (235)
498 4dup_A Quinone oxidoreductase; 91.5 0.34 1.1E-05 31.6 4.7 49 42-90 161-211 (353)
499 4dqx_A Probable oxidoreductase 91.5 1.5 5E-05 27.6 7.5 57 48-108 26-85 (277)
500 3op4_A 3-oxoacyl-[acyl-carrier 91.5 1.5 5E-05 27.0 7.4 57 48-108 8-67 (248)
No 1
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.80 E-value=3e-18 Score=104.90 Aligned_cols=108 Identities=37% Similarity=0.589 Sum_probs=90.5
Q ss_pred CccchhhhhhhhcccCCCCccccccCCCchhhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCC
Q 033605 1 MKLKQLESVLGDLEQFSNPKVELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDID 80 (115)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s 80 (115)
|+++.++.+.+....|..+...+.++.++......++..+... ...++.+|||+|||+|.++..+++.+..+++|+|++
T Consensus 3 m~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~ 81 (207)
T 1wy7_A 3 TRKKELAIALSKLKGFKNPKVWLEQYRTPGNAASELLWLAYSL-GDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVD 81 (207)
T ss_dssp -CCHHHHHHHHTSCCCSSCCGGGTCCCCCHHHHHHHHHHHHHT-TSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESC
T ss_pred ccHHHHHHHHhhCcCCCCcccceeeecCchHHHHHHHHHHHHc-CCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECC
Confidence 5677788888888888887778888888888888777665543 445678999999999999999998766689999999
Q ss_pred hhHHHHHHHHhhccCCceeEEEccccCCc
Q 033605 81 SDSLELASENAADLELDIDFVQCDIRNLE 109 (115)
Q Consensus 81 ~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 109 (115)
+.+++.++++....+.+++++++|+.+++
T Consensus 82 ~~~~~~a~~~~~~~~~~~~~~~~d~~~~~ 110 (207)
T 1wy7_A 82 KEAVDVLIENLGEFKGKFKVFIGDVSEFN 110 (207)
T ss_dssp HHHHHHHHHHTGGGTTSEEEEESCGGGCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEECchHHcC
Confidence 99999999999887778999999998865
No 2
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.74 E-value=3.2e-17 Score=99.88 Aligned_cols=102 Identities=37% Similarity=0.558 Sum_probs=79.0
Q ss_pred cchhhhhhhhcccCCCCccccccCCCchhhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChh
Q 033605 3 LKQLESVLGDLEQFSNPKVELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSD 82 (115)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~ 82 (115)
++.++...+.+..|......+.++.++......++..+... ...++.+|||+|||+|.++..+++.+..+|+|+|+++.
T Consensus 7 ~~~le~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~ 85 (200)
T 1ne2_A 7 KNDLEIRLQKLQQQGNFKNYLEQYPTDASTAAYFLIEIYND-GNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPD 85 (200)
T ss_dssp HHHHHHHHHTSCCCC--------CCCCHHHHHHHHHHHHHH-TSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHH
T ss_pred HHHHHHHHHhcCCCCccccceeecCCCHHHHHHHHHHHHhc-CCCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHH
Confidence 45677788888888888888889999998888888666544 44577899999999999999999776668999999999
Q ss_pred HHHHHHHHhhccCCceeEEEccccCCc
Q 033605 83 SLELASENAADLELDIDFVQCDIRNLE 109 (115)
Q Consensus 83 ~~~~a~~~~~~~~~~v~~~~~d~~~~~ 109 (115)
+++.++++.. +++++++|+.+++
T Consensus 86 ~~~~a~~~~~----~~~~~~~d~~~~~ 108 (200)
T 1ne2_A 86 AIETAKRNCG----GVNFMVADVSEIS 108 (200)
T ss_dssp HHHHHHHHCT----TSEEEECCGGGCC
T ss_pred HHHHHHHhcC----CCEEEECcHHHCC
Confidence 9999999876 6899999998865
No 3
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.71 E-value=2.4e-16 Score=99.89 Aligned_cols=66 Identities=21% Similarity=0.340 Sum_probs=58.2
Q ss_pred CCCCeEEEEcCCCChHHHHHHhc---CCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCcccC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLL---GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRG 112 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~---~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~ 112 (115)
.++.+|||+|||+|..+..+++. +..+|+|+|+|+.|++.|++++...+. +++++++|+.++|+++
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~ 139 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIEN 139 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCS
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccc
Confidence 47789999999999999999864 245899999999999999999887765 8999999999998864
No 4
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.66 E-value=2.6e-16 Score=96.33 Aligned_cols=69 Identities=17% Similarity=0.101 Sum_probs=57.8
Q ss_pred HhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhc-------------cCCceeEEEccccCC
Q 033605 42 NSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAAD-------------LELDIDFVQCDIRNL 108 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~-------------~~~~v~~~~~d~~~~ 108 (115)
..+...++.+|||+|||+|..+..+++.+. +|+|+|+|+.|++.|+++... ...+++++++|+.++
T Consensus 16 ~~l~~~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l 94 (203)
T 1pjz_A 16 SSLNVVPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL 94 (203)
T ss_dssp HHHCCCTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS
T ss_pred HhcccCCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccC
Confidence 333455778999999999999999998765 999999999999999988653 123899999999999
Q ss_pred ccc
Q 033605 109 EWR 111 (115)
Q Consensus 109 ~~~ 111 (115)
+++
T Consensus 95 ~~~ 97 (203)
T 1pjz_A 95 TAR 97 (203)
T ss_dssp THH
T ss_pred Ccc
Confidence 875
No 5
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.66 E-value=1.6e-15 Score=95.28 Aligned_cols=82 Identities=17% Similarity=0.146 Sum_probs=67.5
Q ss_pred hHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCc
Q 033605 32 IASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLE 109 (115)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~ 109 (115)
.....+..++......++.+|||+|||+|..+..+++....+|+|+|+|+.+++.++++....+. +++++++|+++++
T Consensus 20 ~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~ 99 (256)
T 1nkv_A 20 FTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV 99 (256)
T ss_dssp CCHHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCC
Confidence 34455666666666678889999999999999999975455999999999999999999887765 7999999999987
Q ss_pred ccCC
Q 033605 110 WRGK 113 (115)
Q Consensus 110 ~~~~ 113 (115)
+.+.
T Consensus 100 ~~~~ 103 (256)
T 1nkv_A 100 ANEK 103 (256)
T ss_dssp CSSC
T ss_pred cCCC
Confidence 7433
No 6
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.65 E-value=1e-15 Score=96.65 Aligned_cols=78 Identities=17% Similarity=0.226 Sum_probs=65.2
Q ss_pred HHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccC
Q 033605 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG 112 (115)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 112 (115)
...+++.+++.....++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.++++.... .+++++++|+.++++++
T Consensus 14 d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~~-~~v~~i~~D~~~~~~~~ 91 (255)
T 3tqs_A 14 DSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQQ-KNITIYQNDALQFDFSS 91 (255)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTTC-TTEEEEESCTTTCCGGG
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhhC-CCcEEEEcchHhCCHHH
Confidence 34455555666666688899999999999999999875 59999999999999999988752 38999999999998764
No 7
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.65 E-value=7.5e-16 Score=93.12 Aligned_cols=81 Identities=21% Similarity=0.290 Sum_probs=64.1
Q ss_pred CchhhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEcccc
Q 033605 28 TGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIR 106 (115)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~ 106 (115)
+.......++..+.... ..++.+|||+|||+|.++..++..+..+|+|+|+|+.+++.++++....+. +++++++|+.
T Consensus 25 ~~~~~~~~l~~~l~~~~-~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~ 103 (189)
T 3p9n_A 25 TTDRVRESLFNIVTARR-DLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVA 103 (189)
T ss_dssp -CHHHHHHHHHHHHHHS-CCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHH
T ss_pred CcHHHHHHHHHHHHhcc-CCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHH
Confidence 33444445555544332 247789999999999999988877677999999999999999999988876 8999999988
Q ss_pred CCc
Q 033605 107 NLE 109 (115)
Q Consensus 107 ~~~ 109 (115)
+++
T Consensus 104 ~~~ 106 (189)
T 3p9n_A 104 AVV 106 (189)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 8
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.64 E-value=8.3e-16 Score=101.65 Aligned_cols=67 Identities=22% Similarity=0.295 Sum_probs=60.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCcccCCC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGKY 114 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~f 114 (115)
.++++|||||||+|.+++.+++.++.+|+|+|.|+ ++..|++++..++. +|+++++|+++++++++|
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~ 150 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELPEQV 150 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCE
T ss_pred cCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCCccc
Confidence 47889999999999999999999888999999996 88999999988887 799999999999988764
No 9
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.63 E-value=2.9e-15 Score=94.81 Aligned_cols=78 Identities=21% Similarity=0.283 Sum_probs=64.9
Q ss_pred HHHHHHHHhcC-CCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCccc
Q 033605 35 RMLYTAENSFG-DVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR 111 (115)
Q Consensus 35 ~~~~~~~~~~~-~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~ 111 (115)
.....++..+. ..++.+|||+|||+|.++..+++.+..+|+|+|+|+.+++.++++....+. +++++++|+++++++
T Consensus 32 ~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 111 (267)
T 3kkz_A 32 EVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFR 111 (267)
T ss_dssp HHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC
T ss_pred HHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCC
Confidence 33444444444 456789999999999999999987667999999999999999999988776 699999999999876
Q ss_pred C
Q 033605 112 G 112 (115)
Q Consensus 112 ~ 112 (115)
+
T Consensus 112 ~ 112 (267)
T 3kkz_A 112 N 112 (267)
T ss_dssp T
T ss_pred C
Confidence 4
No 10
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.62 E-value=2.8e-15 Score=94.13 Aligned_cols=80 Identities=14% Similarity=0.180 Sum_probs=66.7
Q ss_pred hhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcc
Q 033605 31 HIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW 110 (115)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~ 110 (115)
.....+.+.+++.+...++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.++++....+ +++++++|+.++++
T Consensus 13 l~d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~-~v~~~~~D~~~~~~ 90 (244)
T 1qam_A 13 ITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVDHD-NFQVLNKDILQFKF 90 (244)
T ss_dssp CCCHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTTCC-SEEEECCCGGGCCC
T ss_pred cCCHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhccCC-CeEEEEChHHhCCc
Confidence 3345566666666666678899999999999999999875 599999999999999999886533 89999999999987
Q ss_pred cC
Q 033605 111 RG 112 (115)
Q Consensus 111 ~~ 112 (115)
++
T Consensus 91 ~~ 92 (244)
T 1qam_A 91 PK 92 (244)
T ss_dssp CS
T ss_pred cc
Confidence 63
No 11
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.62 E-value=7e-15 Score=92.22 Aligned_cols=79 Identities=20% Similarity=0.397 Sum_probs=64.7
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccCCC
Q 033605 35 RMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGKY 114 (115)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~f 114 (115)
..+..++......++.+|||+|||+|..+..+++.+. +|+|+|+|+.+++.++++....+.+++++++|+.++++++.|
T Consensus 28 ~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~f 106 (252)
T 1wzn_A 28 DFVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEF 106 (252)
T ss_dssp HHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCE
T ss_pred HHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCc
Confidence 3444455544445678999999999999999998754 999999999999999999887777899999999988876543
No 12
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.62 E-value=1.1e-15 Score=96.33 Aligned_cols=79 Identities=13% Similarity=0.225 Sum_probs=65.5
Q ss_pred hhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcc
Q 033605 31 HIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW 110 (115)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~ 110 (115)
-....+++.+++.....++.+|||+|||+|.++..+++.+..+|+|+|+++.+++.++++ . ..+++++++|+.++++
T Consensus 14 l~d~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~--~~~v~~i~~D~~~~~~ 90 (249)
T 3ftd_A 14 LVSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-G--DERLEVINEDASKFPF 90 (249)
T ss_dssp EECHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-C--CTTEEEECSCTTTCCG
T ss_pred cCCHHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-c--CCCeEEEEcchhhCCh
Confidence 334455666666666667889999999999999999987657999999999999999887 2 2389999999999988
Q ss_pred cC
Q 033605 111 RG 112 (115)
Q Consensus 111 ~~ 112 (115)
++
T Consensus 91 ~~ 92 (249)
T 3ftd_A 91 CS 92 (249)
T ss_dssp GG
T ss_pred hH
Confidence 76
No 13
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.62 E-value=2.6e-15 Score=96.17 Aligned_cols=82 Identities=21% Similarity=0.249 Sum_probs=67.2
Q ss_pred CCCchhhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEc
Q 033605 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQC 103 (115)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~ 103 (115)
...+...++.+++.++......++.+|||+|||+|.++..++..+..+|+|+|+|+.+++.|+++....+. +++++++
T Consensus 101 ~lipr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~ 180 (284)
T 1nv8_A 101 VFVPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKG 180 (284)
T ss_dssp SCCCCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEES
T ss_pred ceecChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEEC
Confidence 34456667777777766544335679999999999999999966556999999999999999999988877 4999999
Q ss_pred cccC
Q 033605 104 DIRN 107 (115)
Q Consensus 104 d~~~ 107 (115)
|+.+
T Consensus 181 D~~~ 184 (284)
T 1nv8_A 181 EFLE 184 (284)
T ss_dssp STTG
T ss_pred cchh
Confidence 9976
No 14
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.61 E-value=5.2e-15 Score=93.35 Aligned_cols=64 Identities=17% Similarity=0.041 Sum_probs=55.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhc------------------cCCceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAAD------------------LELDIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~------------------~~~~v~~~~~d~~~~ 108 (115)
.++.+|||+|||+|..+..+++.+. +|+|+|+|+.|++.|+++... .+.+++++++|+.++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 4678999999999999999998866 999999999999999877641 123899999999998
Q ss_pred ccc
Q 033605 109 EWR 111 (115)
Q Consensus 109 ~~~ 111 (115)
+++
T Consensus 146 ~~~ 148 (252)
T 2gb4_A 146 PRA 148 (252)
T ss_dssp GGG
T ss_pred Ccc
Confidence 875
No 15
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.61 E-value=5.9e-15 Score=93.90 Aligned_cols=76 Identities=22% Similarity=0.236 Sum_probs=63.3
Q ss_pred HHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccC
Q 033605 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG 112 (115)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 112 (115)
...+++.+++.....++ +|||+|||+|.++..+++.+ .+|+|+|+++.+++.++++... .+++++++|+.++++++
T Consensus 32 d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~-~~V~avEid~~~~~~l~~~~~~--~~v~vi~~D~l~~~~~~ 107 (271)
T 3fut_A 32 SEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAG-AEVTAIEKDLRLRPVLEETLSG--LPVRLVFQDALLYPWEE 107 (271)
T ss_dssp CHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT-CCEEEEESCGGGHHHHHHHTTT--SSEEEEESCGGGSCGGG
T ss_pred CHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcCC--CCEEEEECChhhCChhh
Confidence 34455555555566677 99999999999999999875 5999999999999999998763 38999999999998864
No 16
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.61 E-value=8.2e-15 Score=92.09 Aligned_cols=78 Identities=22% Similarity=0.278 Sum_probs=64.1
Q ss_pred HHHHHHHHhc-CCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCccc
Q 033605 35 RMLYTAENSF-GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR 111 (115)
Q Consensus 35 ~~~~~~~~~~-~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~ 111 (115)
.....++..+ ...++.+|||+|||+|..+..+++....+|+|+|+|+.+++.++++....+. +++++++|+.+++++
T Consensus 32 ~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (257)
T 3f4k_A 32 EATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQ 111 (257)
T ss_dssp HHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSC
T ss_pred HHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCC
Confidence 3344444444 3346679999999999999999976555999999999999999999988776 499999999999876
Q ss_pred C
Q 033605 112 G 112 (115)
Q Consensus 112 ~ 112 (115)
+
T Consensus 112 ~ 112 (257)
T 3f4k_A 112 N 112 (257)
T ss_dssp T
T ss_pred C
Confidence 4
No 17
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.61 E-value=7.1e-15 Score=94.52 Aligned_cols=79 Identities=22% Similarity=0.245 Sum_probs=65.7
Q ss_pred hHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCccc
Q 033605 32 IASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR 111 (115)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~ 111 (115)
....+++.+++.....++.+|||+|||+|.++..+++. ..+|+|+|+++.++..++++....+ +++++++|+.+++++
T Consensus 34 ~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~a~~~~~~~~-~v~vi~gD~l~~~~~ 111 (295)
T 3gru_A 34 IDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPYANKLKELYN-NIEIIWGDALKVDLN 111 (295)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHHHHHHHHHCS-SEEEEESCTTTSCGG
T ss_pred CCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhccCC-CeEEEECchhhCCcc
Confidence 34455556666666667889999999999999999987 4599999999999999999886333 899999999998877
Q ss_pred C
Q 033605 112 G 112 (115)
Q Consensus 112 ~ 112 (115)
+
T Consensus 112 ~ 112 (295)
T 3gru_A 112 K 112 (295)
T ss_dssp G
T ss_pred c
Confidence 5
No 18
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.61 E-value=1.3e-14 Score=91.96 Aligned_cols=82 Identities=21% Similarity=0.271 Sum_probs=70.2
Q ss_pred hhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCC
Q 033605 31 HIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNL 108 (115)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~ 108 (115)
.....+.+.+++.+...++.+|||+|||+|.++..+++....+|+|+|+|+.+++.++++....+. +++++++|+.++
T Consensus 44 ~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 123 (273)
T 3bus_A 44 DATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDL 123 (273)
T ss_dssp HHHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccC
Confidence 445566777788877778889999999999999999875456999999999999999999887765 699999999998
Q ss_pred cccC
Q 033605 109 EWRG 112 (115)
Q Consensus 109 ~~~~ 112 (115)
|+++
T Consensus 124 ~~~~ 127 (273)
T 3bus_A 124 PFED 127 (273)
T ss_dssp CSCT
T ss_pred CCCC
Confidence 8765
No 19
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.61 E-value=7.4e-15 Score=92.58 Aligned_cols=76 Identities=21% Similarity=0.246 Sum_probs=63.6
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCCcccC
Q 033605 36 MLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRG 112 (115)
Q Consensus 36 ~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~ 112 (115)
.+..++..+...++.+|||+|||+|.++..+++... +|+|+|+|+.|++.++++....+. ++.++++|++++|+++
T Consensus 25 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~ 101 (260)
T 1vl5_A 25 DLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTD 101 (260)
T ss_dssp CHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCT
T ss_pred HHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCC
Confidence 344455555666888999999999999999997755 999999999999999999887765 7999999999999875
No 20
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.61 E-value=1.2e-14 Score=88.97 Aligned_cols=68 Identities=19% Similarity=0.259 Sum_probs=59.0
Q ss_pred HHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccC
Q 033605 39 TAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRN 107 (115)
Q Consensus 39 ~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~ 107 (115)
.++..+...++.+|||+|||+|.++..+++. ..+|+|+|+++.+++.|+++....+. +++++++|+.+
T Consensus 46 ~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 115 (204)
T 3njr_A 46 LTLAALAPRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPA 115 (204)
T ss_dssp HHHHHHCCCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTG
T ss_pred HHHHhcCCCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhh
Confidence 3444556667889999999999999999987 56999999999999999999988776 69999999987
No 21
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.61 E-value=8.7e-15 Score=97.00 Aligned_cols=81 Identities=17% Similarity=0.231 Sum_probs=67.4
Q ss_pred HHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCcc
Q 033605 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEW 110 (115)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~ 110 (115)
.....+.+.......++.+|||+|||+|.++..+++.+..+|+|+|+| .|++.|+++....+. +++++++|++++++
T Consensus 48 ~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 126 (376)
T 3r0q_C 48 MDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISL 126 (376)
T ss_dssp HHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCC
T ss_pred HHHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCc
Confidence 344455555555556788999999999999999998877799999999 999999999988876 59999999999887
Q ss_pred cCCC
Q 033605 111 RGKY 114 (115)
Q Consensus 111 ~~~f 114 (115)
+++|
T Consensus 127 ~~~~ 130 (376)
T 3r0q_C 127 PEKV 130 (376)
T ss_dssp SSCE
T ss_pred CCcc
Confidence 7543
No 22
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.61 E-value=3.1e-15 Score=95.59 Aligned_cols=78 Identities=12% Similarity=0.172 Sum_probs=62.8
Q ss_pred hHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCC---CeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 32 IASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGA---DQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
....+++.+++.....++.+|||+|||+|.++..+++... .+|+|+|+++.|++.++++. ..+++++++|+.++
T Consensus 26 ~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~---~~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 26 VDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF---GELLELHAGDALTF 102 (279)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH---GGGEEEEESCGGGC
T ss_pred CCHHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc---CCCcEEEECChhcC
Confidence 3344555556665666888999999999999999997543 23999999999999999984 23899999999999
Q ss_pred cccC
Q 033605 109 EWRG 112 (115)
Q Consensus 109 ~~~~ 112 (115)
++++
T Consensus 103 ~~~~ 106 (279)
T 3uzu_A 103 DFGS 106 (279)
T ss_dssp CGGG
T ss_pred ChhH
Confidence 8865
No 23
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.61 E-value=3.2e-15 Score=93.20 Aligned_cols=80 Identities=8% Similarity=0.026 Sum_probs=64.3
Q ss_pred hHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC--c
Q 033605 32 IASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL--E 109 (115)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~--~ 109 (115)
+...++..+.... ..++.+|||+|||+|.++..+++.+..+|+|+|+|+.|++.|+++....+.+++++++|++++ +
T Consensus 45 ~~~~~~~~l~~~~-~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~ 123 (236)
T 1zx0_A 45 WETPYMHALAAAA-SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPT 123 (236)
T ss_dssp GGHHHHHHHHHHH-TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGG
T ss_pred HHHHHHHHHHhhc-CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcc
Confidence 3444444444443 236789999999999999999876556999999999999999999887767899999999888 7
Q ss_pred ccC
Q 033605 110 WRG 112 (115)
Q Consensus 110 ~~~ 112 (115)
+++
T Consensus 124 ~~~ 126 (236)
T 1zx0_A 124 LPD 126 (236)
T ss_dssp SCT
T ss_pred cCC
Confidence 764
No 24
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.60 E-value=9.2e-15 Score=87.91 Aligned_cols=61 Identities=25% Similarity=0.323 Sum_probs=54.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~ 108 (115)
.++.+|||+|||+|.++..+++. ..+|+|+|+|+.|++.|+++....+. ++++++.+++.+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l 82 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENL 82 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGG
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHH
Confidence 46789999999999999999987 56999999999999999999988776 899999888774
No 25
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.59 E-value=9.8e-15 Score=93.56 Aligned_cols=78 Identities=12% Similarity=0.174 Sum_probs=65.5
Q ss_pred HHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCcc
Q 033605 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEW 110 (115)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~ 110 (115)
...+++.+++.+...++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.++++....+. +++++++|+.++++
T Consensus 13 d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~ 91 (285)
T 1zq9_A 13 NPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDL 91 (285)
T ss_dssp CHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCC
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccc
Confidence 445566666666666788999999999999999998754 999999999999999999876654 79999999998876
Q ss_pred c
Q 033605 111 R 111 (115)
Q Consensus 111 ~ 111 (115)
+
T Consensus 92 ~ 92 (285)
T 1zq9_A 92 P 92 (285)
T ss_dssp C
T ss_pred h
Confidence 5
No 26
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.59 E-value=1.4e-14 Score=86.59 Aligned_cols=76 Identities=18% Similarity=0.319 Sum_probs=63.0
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCCccc
Q 033605 34 SRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWR 111 (115)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~ 111 (115)
..+...+...+...++.+|||+|||+|.++..+++ +..+++|+|+++.+++.++++....+. +++++++|+.+ +++
T Consensus 21 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~ 97 (183)
T 2yxd_A 21 EEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLD 97 (183)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGG
T ss_pred HHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-ccc
Confidence 34444555555566788999999999999999998 567999999999999999999988776 89999999877 544
No 27
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.59 E-value=1.9e-15 Score=92.35 Aligned_cols=62 Identities=18% Similarity=0.188 Sum_probs=54.7
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC---ceeEEEccccCCc
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL---DIDFVQCDIRNLE 109 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~v~~~~~d~~~~~ 109 (115)
++.+|||+|||+|.++..++..+..+|+|+|+|+.+++.|+++....+. +++++++|+.++.
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~ 117 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFL 117 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHT
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHH
Confidence 5679999999999999987776667999999999999999999987774 7999999987653
No 28
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.59 E-value=1.8e-14 Score=94.39 Aligned_cols=74 Identities=26% Similarity=0.290 Sum_probs=62.7
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCccc
Q 033605 37 LYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR 111 (115)
Q Consensus 37 ~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~ 111 (115)
.+.+.......++.+|||+|||+|.++..+++.+..+|+|+|+|+ +++.|+++....+. +++++++|+++++++
T Consensus 53 ~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 128 (340)
T 2fyt_A 53 RDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLP 128 (340)
T ss_dssp HHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCS
T ss_pred HHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCC
Confidence 344545444567889999999999999999987667999999997 99999999887765 899999999998877
No 29
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.59 E-value=1.9e-15 Score=95.60 Aligned_cols=72 Identities=13% Similarity=0.142 Sum_probs=57.9
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccCC
Q 033605 34 SRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGK 113 (115)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~ 113 (115)
..+++.+....+ .+.+|||+|||+|..+..+++.+. +|+|+|+|+.|++.|++. .+++++++|++++++++.
T Consensus 27 ~~l~~~l~~~~~--~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a~~~-----~~v~~~~~~~e~~~~~~~ 98 (257)
T 4hg2_A 27 RALFRWLGEVAP--ARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQALRH-----PRVTYAVAPAEDTGLPPA 98 (257)
T ss_dssp HHHHHHHHHHSS--CSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTCCCC-----TTEEEEECCTTCCCCCSS
T ss_pred HHHHHHHHHhcC--CCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhhhhc-----CCceeehhhhhhhcccCC
Confidence 345555555533 456999999999999999998754 999999999999877532 279999999999998864
No 30
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.59 E-value=5.3e-15 Score=93.15 Aligned_cols=64 Identities=16% Similarity=0.187 Sum_probs=57.6
Q ss_pred CCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCCcc
Q 033605 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW 110 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~ 110 (115)
.++.+|||+|||+|..++.++.. +..+|+++|+|+.+++.++++....+. +++++++|+++++.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~ 144 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAR 144 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhc
Confidence 45779999999999999999964 567999999999999999999998887 89999999988765
No 31
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.59 E-value=1.4e-14 Score=89.24 Aligned_cols=81 Identities=25% Similarity=0.262 Sum_probs=63.5
Q ss_pred hHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcC-CCeEEEEeCChhHHHHHHHHhhccCC------ceeEEEcc
Q 033605 32 IASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL------DIDFVQCD 104 (115)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~------~v~~~~~d 104 (115)
......+.+.+.+...++.+|||+|||+|.++..+++.+ ..+++|+|+|+.+++.++++....+. +++++++|
T Consensus 13 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 92 (219)
T 3jwg_A 13 LNQQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSS 92 (219)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECC
T ss_pred chHHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCc
Confidence 444444455444444577899999999999999999754 36999999999999999999876543 69999999
Q ss_pred ccCCcccC
Q 033605 105 IRNLEWRG 112 (115)
Q Consensus 105 ~~~~~~~~ 112 (115)
+...++++
T Consensus 93 ~~~~~~~~ 100 (219)
T 3jwg_A 93 LVYRDKRF 100 (219)
T ss_dssp SSSCCGGG
T ss_pred cccccccc
Confidence 98777643
No 32
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.59 E-value=5e-15 Score=95.47 Aligned_cols=78 Identities=22% Similarity=0.289 Sum_probs=60.4
Q ss_pred HHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCCccc
Q 033605 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWR 111 (115)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~ 111 (115)
...+.+.+++.....++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.++++....+. +++++++|+.+++++
T Consensus 27 ~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~-~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~ 105 (299)
T 2h1r_A 27 NPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLA-KKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFP 105 (299)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTTS-SEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCC
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcC-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcc
Confidence 33445555555566678899999999999999999774 5999999999999999999876655 899999999988765
No 33
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.59 E-value=1.7e-14 Score=93.30 Aligned_cols=78 Identities=14% Similarity=0.257 Sum_probs=65.2
Q ss_pred HHHHHHHHhcC-CCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCccc
Q 033605 35 RMLYTAENSFG-DVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR 111 (115)
Q Consensus 35 ~~~~~~~~~~~-~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~ 111 (115)
...+.+++.+. ..++.+|||+|||+|.++..+++....+|+|+|+++.+++.++++....+. +++++++|+++++++
T Consensus 103 ~~~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 182 (312)
T 3vc1_A 103 AQAEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFD 182 (312)
T ss_dssp HHHHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC
T ss_pred HHHHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCC
Confidence 33445666665 567789999999999999999975245999999999999999999988776 699999999999876
Q ss_pred C
Q 033605 112 G 112 (115)
Q Consensus 112 ~ 112 (115)
+
T Consensus 183 ~ 183 (312)
T 3vc1_A 183 K 183 (312)
T ss_dssp T
T ss_pred C
Confidence 4
No 34
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.58 E-value=9.2e-15 Score=87.82 Aligned_cols=76 Identities=21% Similarity=0.252 Sum_probs=61.3
Q ss_pred HHHHHHHHHHhcC-CCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCC
Q 033605 33 ASRMLYTAENSFG-DVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNL 108 (115)
Q Consensus 33 ~~~~~~~~~~~~~-~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~ 108 (115)
...+.+.+...+. ..++.+|||+|||+|.++..+++.+..+|+|+|+++.+++.++++....+. +++++++|+.+.
T Consensus 28 ~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 106 (187)
T 2fhp_A 28 TDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRA 106 (187)
T ss_dssp CHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHH
Confidence 3444445554443 246789999999999999998877667999999999999999999987775 799999998763
No 35
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.58 E-value=1.8e-14 Score=88.51 Aligned_cols=77 Identities=14% Similarity=0.173 Sum_probs=62.6
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccCC
Q 033605 35 RMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGK 113 (115)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~ 113 (115)
.....+.......++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++....+ +++++++|+.+++..+.
T Consensus 38 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~~~~~ 114 (216)
T 3ofk_A 38 RHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRAIGRACQRTKRWS-HISWAATDILQFSTAEL 114 (216)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHHHHHHHHHTTTCS-SEEEEECCTTTCCCSCC
T ss_pred HHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcccCC-CeEEEEcchhhCCCCCC
Confidence 3444444454555778999999999999999998754 99999999999999999987755 89999999999884443
No 36
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.58 E-value=2.9e-14 Score=91.50 Aligned_cols=68 Identities=15% Similarity=0.099 Sum_probs=57.5
Q ss_pred HhcCCCCCCeEEEEcCCCChHH-HHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCCc
Q 033605 42 NSFGDVSNKVVADFGCGCGTLG-AAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLE 109 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~G~G~~~-~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~ 109 (115)
......++.+|||+|||+|.++ ..+++...++|+|+|++++|++.|++++...+. +++++++|+.+++
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~ 185 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID 185 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC
Confidence 3456678999999999999766 445565567999999999999999999887776 8999999998876
No 37
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.58 E-value=1.9e-14 Score=91.67 Aligned_cols=81 Identities=22% Similarity=0.242 Sum_probs=68.1
Q ss_pred CCchhhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHh-cCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEcc
Q 033605 27 PTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATL-LGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCD 104 (115)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d 104 (115)
..+...++.+++.++..+. .++.+|||+|||+|..+..++. .+..+|+|+|+|+.+++.++++....+. +++++++|
T Consensus 89 ~ipr~~te~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d 167 (276)
T 2b3t_A 89 LIPRPDTECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSD 167 (276)
T ss_dssp CCCCTTHHHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCS
T ss_pred cccCchHHHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcc
Confidence 3455667788888887765 4677999999999999999995 4567999999999999999999988776 79999999
Q ss_pred ccCC
Q 033605 105 IRNL 108 (115)
Q Consensus 105 ~~~~ 108 (115)
+.+.
T Consensus 168 ~~~~ 171 (276)
T 2b3t_A 168 WFSA 171 (276)
T ss_dssp TTGG
T ss_pred hhhh
Confidence 8763
No 38
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.58 E-value=2.7e-14 Score=93.72 Aligned_cols=80 Identities=20% Similarity=0.297 Sum_probs=65.5
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCccc
Q 033605 34 SRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR 111 (115)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~ 111 (115)
....+.+...+...++.+|||+|||+|.++..+++.+..+|+|+|+|+ ++..++++....+. +++++++|+++++++
T Consensus 36 ~~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~ 114 (348)
T 2y1w_A 36 GTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP 114 (348)
T ss_dssp HHHHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS
T ss_pred HHHHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCC
Confidence 334455555555567889999999999999999987777999999996 88999999887765 799999999998876
Q ss_pred CCC
Q 033605 112 GKY 114 (115)
Q Consensus 112 ~~f 114 (115)
++|
T Consensus 115 ~~~ 117 (348)
T 2y1w_A 115 EQV 117 (348)
T ss_dssp SCE
T ss_pred Cce
Confidence 543
No 39
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.58 E-value=2.4e-14 Score=92.15 Aligned_cols=77 Identities=12% Similarity=0.116 Sum_probs=65.9
Q ss_pred hhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccC
Q 033605 31 HIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRN 107 (115)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~ 107 (115)
......+..++..+...++.+|||+|||+|.++..+++. + .+|+|+|+|+.+++.++++....+. +++++++|+.+
T Consensus 55 ~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 133 (302)
T 3hem_A 55 EAQYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEE 133 (302)
T ss_dssp HHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGG
T ss_pred HHHHHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHH
Confidence 344556677777777778889999999999999999975 5 6999999999999999999988776 69999999987
Q ss_pred C
Q 033605 108 L 108 (115)
Q Consensus 108 ~ 108 (115)
+
T Consensus 134 ~ 134 (302)
T 3hem_A 134 F 134 (302)
T ss_dssp C
T ss_pred c
Confidence 6
No 40
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.58 E-value=1.5e-14 Score=88.64 Aligned_cols=79 Identities=28% Similarity=0.334 Sum_probs=65.2
Q ss_pred HHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCcc
Q 033605 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEW 110 (115)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~ 110 (115)
...+.+.+.......++ +|||+|||+|.++..+++.+..+++|+|+|+.+++.++++....+. +++++++|+.++++
T Consensus 29 ~~~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 107 (219)
T 3dlc_A 29 YPIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPI 107 (219)
T ss_dssp HHHHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSS
T ss_pred cHHHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCC
Confidence 34455556666554444 9999999999999999976556999999999999999999888775 79999999999887
Q ss_pred cC
Q 033605 111 RG 112 (115)
Q Consensus 111 ~~ 112 (115)
++
T Consensus 108 ~~ 109 (219)
T 3dlc_A 108 ED 109 (219)
T ss_dssp CT
T ss_pred Cc
Confidence 65
No 41
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.58 E-value=2.6e-14 Score=87.94 Aligned_cols=80 Identities=23% Similarity=0.361 Sum_probs=63.2
Q ss_pred hHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcC-CCeEEEEeCChhHHHHHHHHhhccCC------ceeEEEcc
Q 033605 32 IASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL------DIDFVQCD 104 (115)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~------~v~~~~~d 104 (115)
......+.+.+.+...++.+|||+|||+|.++..+++.+ ..+++|+|+|+.+++.++++....+. +++++++|
T Consensus 13 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 92 (217)
T 3jwh_A 13 LNQQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGA 92 (217)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECC
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCC
Confidence 344444444444444577899999999999999999754 46999999999999999999876554 69999999
Q ss_pred ccCCccc
Q 033605 105 IRNLEWR 111 (115)
Q Consensus 105 ~~~~~~~ 111 (115)
+...+.+
T Consensus 93 ~~~~~~~ 99 (217)
T 3jwh_A 93 LTYQDKR 99 (217)
T ss_dssp TTSCCGG
T ss_pred ccccccc
Confidence 9877755
No 42
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.57 E-value=7.7e-15 Score=94.31 Aligned_cols=77 Identities=18% Similarity=0.286 Sum_probs=62.8
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHh--cCCCeEEEEeCChhHHHHHHHHhhcc---CCceeEEEccccCCc
Q 033605 35 RMLYTAENSFGDVSNKVVADFGCGCGTLGAAATL--LGADQVIAIDIDSDSLELASENAADL---ELDIDFVQCDIRNLE 109 (115)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~--~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~v~~~~~d~~~~~ 109 (115)
.+.+.+.... ..++.+|||+|||+|..+..+++ .+..+|+|+|+|+.+++.++++.... ..+++++++|+++++
T Consensus 24 ~~~~~l~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~ 102 (299)
T 3g5t_A 24 DFYKMIDEYH-DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFK 102 (299)
T ss_dssp HHHHHHHHHC-CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCG
T ss_pred HHHHHHHHHh-cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCC
Confidence 3444444442 34788999999999999999995 35679999999999999999998776 338999999999988
Q ss_pred ccC
Q 033605 110 WRG 112 (115)
Q Consensus 110 ~~~ 112 (115)
+++
T Consensus 103 ~~~ 105 (299)
T 3g5t_A 103 FLG 105 (299)
T ss_dssp GGC
T ss_pred ccc
Confidence 764
No 43
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.57 E-value=1.7e-14 Score=92.70 Aligned_cols=78 Identities=18% Similarity=0.207 Sum_probs=63.2
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccC----CceeEEEccccCCcc
Q 033605 35 RMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLE----LDIDFVQCDIRNLEW 110 (115)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~v~~~~~d~~~~~~ 110 (115)
.....++..+.. ++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.++++....+ .+++++++|+.++++
T Consensus 70 ~~~~~~~~~~~~-~~~~vLDlGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 147 (299)
T 3g2m_A 70 SEAREFATRTGP-VSGPVLELAAGMGRLTFPFLDLG-WEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL 147 (299)
T ss_dssp HHHHHHHHHHCC-CCSCEEEETCTTTTTHHHHHTTT-CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC
T ss_pred HHHHHHHHhhCC-CCCcEEEEeccCCHHHHHHHHcC-CeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc
Confidence 334444444443 44599999999999999999875 489999999999999999988766 479999999999988
Q ss_pred cCCC
Q 033605 111 RGKY 114 (115)
Q Consensus 111 ~~~f 114 (115)
++.|
T Consensus 148 ~~~f 151 (299)
T 3g2m_A 148 DKRF 151 (299)
T ss_dssp SCCE
T ss_pred CCCc
Confidence 6554
No 44
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.57 E-value=2.5e-14 Score=91.69 Aligned_cols=82 Identities=11% Similarity=-0.006 Sum_probs=67.8
Q ss_pred hhHHHHHHHHHHhc----CCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEcc
Q 033605 31 HIASRMLYTAENSF----GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCD 104 (115)
Q Consensus 31 ~~~~~~~~~~~~~~----~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d 104 (115)
....+..+.++..+ ...++.+|||+|||+|..+..+++....+|+|+|+|+.+++.++++....+. +++++++|
T Consensus 61 ~~~~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d 140 (297)
T 2o57_A 61 EASLRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGS 140 (297)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECC
T ss_pred HHHHHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcC
Confidence 34455666677766 5567889999999999999999975234999999999999999999877665 79999999
Q ss_pred ccCCcccC
Q 033605 105 IRNLEWRG 112 (115)
Q Consensus 105 ~~~~~~~~ 112 (115)
+.++|+++
T Consensus 141 ~~~~~~~~ 148 (297)
T 2o57_A 141 FLEIPCED 148 (297)
T ss_dssp TTSCSSCT
T ss_pred cccCCCCC
Confidence 99998765
No 45
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.57 E-value=3.2e-14 Score=88.80 Aligned_cols=73 Identities=21% Similarity=0.264 Sum_probs=62.6
Q ss_pred HHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCCcccC
Q 033605 39 TAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRG 112 (115)
Q Consensus 39 ~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~ 112 (115)
.++......++.+|||+|||+|.++..+++... +++|+|+|+.+++.++++....+. +++++++|++++++++
T Consensus 12 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 85 (239)
T 1xxl_A 12 LMIKTAECRAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPD 85 (239)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCT
T ss_pred hHHHHhCcCCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCC
Confidence 334444666888999999999999999997754 999999999999999999887765 7999999999998764
No 46
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.57 E-value=1.7e-14 Score=88.66 Aligned_cols=75 Identities=20% Similarity=0.297 Sum_probs=63.4
Q ss_pred HHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcC--CCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCCcccC
Q 033605 38 YTAENSFGDVSNKVVADFGCGCGTLGAAATLLG--ADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRG 112 (115)
Q Consensus 38 ~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~ 112 (115)
..++..+...++.+|||+|||+|.++..+++.. ..+++|+|+|+.+++.++++....+. +++++++|+.++++++
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~ 104 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPD 104 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCS
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCC
Confidence 344455556678899999999999999999653 46999999999999999999888776 7999999999988765
No 47
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.57 E-value=1.3e-14 Score=86.74 Aligned_cols=72 Identities=14% Similarity=0.184 Sum_probs=59.7
Q ss_pred HHHHHHHhcC-CCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccC
Q 033605 36 MLYTAENSFG-DVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRN 107 (115)
Q Consensus 36 ~~~~~~~~~~-~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~ 107 (115)
+.+.+...+. ..++.+|||+|||+|.++..+++.+..+|+|+|+++.+++.++++....+. +++++++|+.+
T Consensus 18 ~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 92 (177)
T 2esr_A 18 VRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER 92 (177)
T ss_dssp CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH
T ss_pred HHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHH
Confidence 3444444443 446789999999999999999977667999999999999999999988776 69999999876
No 48
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.57 E-value=5.6e-15 Score=90.30 Aligned_cols=60 Identities=22% Similarity=0.204 Sum_probs=54.4
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccC
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRN 107 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~ 107 (115)
++.+|||+|||+|.++..++..+..+|+|+|+|+.|++.|+++....+. +++++++|+.+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~ 114 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMS 114 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHH
Confidence 5679999999999999998776666999999999999999999988876 89999999876
No 49
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.57 E-value=2.1e-14 Score=97.71 Aligned_cols=80 Identities=20% Similarity=0.297 Sum_probs=66.2
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCccc
Q 033605 34 SRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR 111 (115)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~ 111 (115)
....+.++..+...++.+|||+|||+|.+++.+++.+..+|+|+|+|+ +++.|++++...+. +++++++|+++++++
T Consensus 144 ~~~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~ 222 (480)
T 3b3j_A 144 GTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP 222 (480)
T ss_dssp HHHHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS
T ss_pred HHHHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC
Confidence 344555666555557789999999999999999887677999999999 99999999888775 799999999998776
Q ss_pred CCC
Q 033605 112 GKY 114 (115)
Q Consensus 112 ~~f 114 (115)
++|
T Consensus 223 ~~f 225 (480)
T 3b3j_A 223 EQV 225 (480)
T ss_dssp SCE
T ss_pred CCe
Confidence 543
No 50
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.56 E-value=2.4e-14 Score=89.35 Aligned_cols=65 Identities=37% Similarity=0.397 Sum_probs=57.7
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCcccCC
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGK 113 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~ 113 (115)
++.+|||+|||+|..+..+++.+ .+|+|+|+|+.+++.+++++...+. +++++++|+.+++....
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 144 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLK 144 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCC
T ss_pred CCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCC
Confidence 67899999999999999999875 6999999999999999999988886 89999999988764333
No 51
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.56 E-value=3.6e-14 Score=85.91 Aligned_cols=70 Identities=21% Similarity=0.227 Sum_probs=59.6
Q ss_pred hcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCCcccCC
Q 033605 43 SFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRGK 113 (115)
Q Consensus 43 ~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~~ 113 (115)
.+...++.+|||+|||+|..+..+++.+. +++|+|+|+.+++.++++....+. +++++++|+.++++++.
T Consensus 27 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~ 97 (199)
T 2xvm_A 27 AVKVVKPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQ 97 (199)
T ss_dssp HTTTSCSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCC
T ss_pred HhhccCCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCC
Confidence 33445678999999999999999998744 999999999999999999887776 89999999998876433
No 52
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.56 E-value=5.2e-14 Score=87.38 Aligned_cols=75 Identities=19% Similarity=0.280 Sum_probs=62.2
Q ss_pred HHHHHhcC-CCCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccCC
Q 033605 38 YTAENSFG-DVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGK 113 (115)
Q Consensus 38 ~~~~~~~~-~~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~ 113 (115)
+.+...+. ..++.+|||+|||+|.++..+++. +..+++|+|+|+.+++.++++....+ +++++++|+.++++++.
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~~~~~ 109 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL-KVKYIEADYSKYDFEEK 109 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT-TEEEEESCTTTCCCCSC
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC-CEEEEeCchhccCCCCC
Confidence 44444443 346789999999999999999975 35699999999999999999987766 89999999999887644
No 53
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.56 E-value=1.6e-14 Score=89.01 Aligned_cols=62 Identities=18% Similarity=0.254 Sum_probs=55.5
Q ss_pred CCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCCc
Q 033605 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLE 109 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~ 109 (115)
++.+|||+|||+|.++..+++. +..+++|+|+|+.++..|+++....+. ++.++++|+.+++
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~ 101 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLT 101 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHH
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHH
Confidence 5679999999999999999964 457999999999999999999988777 8999999998765
No 54
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.56 E-value=3.1e-14 Score=90.96 Aligned_cols=80 Identities=26% Similarity=0.346 Sum_probs=64.9
Q ss_pred HHHHHHHHhc-CCCCCCeEEEEcCCCChHHHHHHhc-C-CCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCccc
Q 033605 35 RMLYTAENSF-GDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR 111 (115)
Q Consensus 35 ~~~~~~~~~~-~~~~~~~vLDlG~G~G~~~~~~~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~ 111 (115)
..+..+...+ ...++.+|||+|||+|.++..+++. + ..+|+|+|+|+.+++.++++....+.+++++++|+.+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~ 87 (284)
T 3gu3_A 8 DYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELN 87 (284)
T ss_dssp HHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCS
T ss_pred HHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcC
Confidence 3344444443 3457789999999999999999964 3 36999999999999999999887777899999999998886
Q ss_pred CCC
Q 033605 112 GKY 114 (115)
Q Consensus 112 ~~f 114 (115)
+.|
T Consensus 88 ~~f 90 (284)
T 3gu3_A 88 DKY 90 (284)
T ss_dssp SCE
T ss_pred CCe
Confidence 543
No 55
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.56 E-value=4.7e-14 Score=90.04 Aligned_cols=77 Identities=14% Similarity=0.203 Sum_probs=64.9
Q ss_pred hHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHH-hcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCC
Q 033605 32 IASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAAT-LLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNL 108 (115)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~-~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~ 108 (115)
.....++.+++.+...++.+|||+|||+|.++..++ ..+. +|+|+|+|+.+++.++++....+. +++++++|+.++
T Consensus 48 a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 126 (287)
T 1kpg_A 48 AQIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF 126 (287)
T ss_dssp HHHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC
T ss_pred HHHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC
Confidence 344566677777676778899999999999999999 4544 999999999999999999887665 799999999877
Q ss_pred c
Q 033605 109 E 109 (115)
Q Consensus 109 ~ 109 (115)
|
T Consensus 127 ~ 127 (287)
T 1kpg_A 127 D 127 (287)
T ss_dssp C
T ss_pred C
Confidence 6
No 56
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.56 E-value=6.3e-14 Score=94.37 Aligned_cols=79 Identities=18% Similarity=0.241 Sum_probs=69.1
Q ss_pred CchhhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEcccc
Q 033605 28 TGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIR 106 (115)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~ 106 (115)
.+...++.+++.+++.+...++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|+++...++. +++++++|+.
T Consensus 266 ~n~~~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~ 344 (433)
T 1uwv_A 266 VNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLE 344 (433)
T ss_dssp SBHHHHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTT
T ss_pred cCHHHHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHH
Confidence 345567788888887776667789999999999999999977 55999999999999999999988877 8999999998
Q ss_pred C
Q 033605 107 N 107 (115)
Q Consensus 107 ~ 107 (115)
+
T Consensus 345 ~ 345 (433)
T 1uwv_A 345 E 345 (433)
T ss_dssp S
T ss_pred H
Confidence 7
No 57
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.56 E-value=7.9e-14 Score=85.05 Aligned_cols=71 Identities=14% Similarity=0.202 Sum_probs=60.0
Q ss_pred HHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcC-CCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCC
Q 033605 38 YTAENSFGDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNL 108 (115)
Q Consensus 38 ~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~ 108 (115)
..++......++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.++++....+. +++++++|+.+.
T Consensus 30 ~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 102 (204)
T 3e05_A 30 AVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEG 102 (204)
T ss_dssp HHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTT
T ss_pred HHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhh
Confidence 344455566678899999999999999999764 47999999999999999999988776 899999998654
No 58
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.55 E-value=6.7e-14 Score=87.83 Aligned_cols=74 Identities=24% Similarity=0.326 Sum_probs=62.3
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccC
Q 033605 37 LYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG 112 (115)
Q Consensus 37 ~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 112 (115)
...+...++..++.+|||+|||+|.++..+++.+..+|+|+|+|+.+++.++++.. ..+++++++|+.++++++
T Consensus 33 ~~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~~~~~ 106 (253)
T 3g5l_A 33 WHELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT--SPVVCYEQKAIEDIAIEP 106 (253)
T ss_dssp HHHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC--CTTEEEEECCGGGCCCCT
T ss_pred HHHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc--cCCeEEEEcchhhCCCCC
Confidence 34455555656788999999999999999998766699999999999999999876 338999999999988764
No 59
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.55 E-value=6.2e-15 Score=92.19 Aligned_cols=63 Identities=14% Similarity=0.237 Sum_probs=56.4
Q ss_pred CCCeEEEEcCCCChHHHHHHh-cCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCCcc
Q 033605 48 SNKVVADFGCGCGTLGAAATL-LGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW 110 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~ 110 (115)
++.+|||+|||+|..+..++. .+..+|+|+|+|+.|++.++++....+. +++++++|++++++
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 134 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQ 134 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTT
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcc
Confidence 677999999999999999985 4456999999999999999999988877 89999999988775
No 60
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.55 E-value=1.7e-14 Score=90.09 Aligned_cols=62 Identities=10% Similarity=0.054 Sum_probs=55.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
.++.+|||||||+|..+..+++....+++|||+|+.+++.|+++....+.++.++.+|++++
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~ 120 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV 120 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHH
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhh
Confidence 47889999999999999999987666999999999999999999988887899999987654
No 61
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.55 E-value=6.5e-14 Score=86.14 Aligned_cols=62 Identities=24% Similarity=0.314 Sum_probs=55.0
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccCC
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGK 113 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~ 113 (115)
++.+|||+|||+|.++..+++.+ .+++|+|+|+.+++.++++.. .+++++++|+.++++++.
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~d~~~~~~~~~ 106 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAG-RTVYGIEPSREMRMIAKEKLP---KEFSITEGDFLSFEVPTS 106 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTT-CEEEEECSCHHHHHHHHHHSC---TTCCEESCCSSSCCCCSC
T ss_pred CCCeEEEeCCCCCHHHHHHHhCC-CeEEEEeCCHHHHHHHHHhCC---CceEEEeCChhhcCCCCC
Confidence 77899999999999999999874 499999999999999999876 378999999999887643
No 62
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.55 E-value=2.5e-14 Score=94.00 Aligned_cols=65 Identities=28% Similarity=0.357 Sum_probs=58.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCcccC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRG 112 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~ 112 (115)
.++.+|||+|||+|.++..+++.+..+|+|+|+|+ +++.|+++....+. +++++++|++++++++
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 131 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPV 131 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSS
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCC
Confidence 47789999999999999999988777999999995 99999999988776 4999999999998873
No 63
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.55 E-value=2.7e-14 Score=89.91 Aligned_cols=79 Identities=22% Similarity=0.127 Sum_probs=65.9
Q ss_pred HHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccC
Q 033605 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG 112 (115)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 112 (115)
.....+.++..+...++.+|||+|||+|.++..+++....+|+|+|+|+.+++.++++.... .+++++++|+.++++++
T Consensus 40 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~ 118 (266)
T 3ujc_A 40 GLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN-NKIIFEANDILTKEFPE 118 (266)
T ss_dssp HHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC-TTEEEEECCTTTCCCCT
T ss_pred hHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC-CCeEEEECccccCCCCC
Confidence 34456666777666778899999999999999999742459999999999999999987665 48999999999988764
No 64
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.55 E-value=2.6e-14 Score=91.25 Aligned_cols=66 Identities=27% Similarity=0.395 Sum_probs=59.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccCC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGK 113 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~ 113 (115)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++....+.+++++++|+.++++.+.
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~ 184 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQEN 184 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSC
T ss_pred cCCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCC
Confidence 3778999999999999999998755 99999999999999999998887799999999998876444
No 65
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.55 E-value=3.9e-14 Score=92.32 Aligned_cols=64 Identities=28% Similarity=0.497 Sum_probs=57.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCccc
Q 033605 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR 111 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~ 111 (115)
.++.+|||+|||+|.++..+++.+..+|+|+|++ .+++.|+++....+. +++++++|+++++++
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 102 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLP 102 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCS
T ss_pred cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCC
Confidence 4778999999999999999998776799999999 599999999887776 699999999998877
No 66
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.55 E-value=4.6e-14 Score=86.77 Aligned_cols=62 Identities=21% Similarity=0.323 Sum_probs=55.8
Q ss_pred CCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCCc
Q 033605 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLE 109 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~ 109 (115)
++.+|||+|||+|.++..+++. +..+++|+|+|+.++..|+++....+. +++++++|+.+++
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~ 104 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLT 104 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGG
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHH
Confidence 5679999999999999999964 456999999999999999999988776 8999999998876
No 67
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.54 E-value=3.7e-14 Score=88.13 Aligned_cols=66 Identities=14% Similarity=0.089 Sum_probs=56.0
Q ss_pred HHhcCCCCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccC
Q 033605 41 ENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRN 107 (115)
Q Consensus 41 ~~~~~~~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~ 107 (115)
++.+...++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.++++.... .++.++.+|+.+
T Consensus 67 l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~ 133 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-ENIIPILGDANK 133 (230)
T ss_dssp CCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-TTEEEEECCTTC
T ss_pred ccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-CCeEEEECCCCC
Confidence 44444557789999999999999999975 5469999999999999999987665 489999999987
No 68
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.54 E-value=9e-14 Score=85.07 Aligned_cols=77 Identities=16% Similarity=0.083 Sum_probs=64.3
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCCccc
Q 033605 34 SRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWR 111 (115)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~ 111 (115)
......+...+...++.+|||+|||+|.++..+++. ..+|+++|+++.+++.++++....+. +++++++|+.+...+
T Consensus 63 ~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~ 140 (210)
T 3lbf_A 63 PYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQA 140 (210)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCcc
Confidence 344555556666678889999999999999999987 55999999999999999999988776 899999999875543
No 69
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.54 E-value=3.7e-14 Score=88.14 Aligned_cols=64 Identities=19% Similarity=0.131 Sum_probs=57.1
Q ss_pred CCCeEEEEcCCCChHHHHHHhcC-CCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCccc
Q 033605 48 SNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR 111 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~ 111 (115)
++.+|+|+|||+|.+++.+++.+ ..+|+++|+++.+++.|++++..++. +++++++|..+...+
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~ 87 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE 87 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc
Confidence 66899999999999999999865 46899999999999999999999887 699999998876544
No 70
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.54 E-value=1.8e-14 Score=88.68 Aligned_cols=66 Identities=23% Similarity=0.234 Sum_probs=53.6
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHH----hhccCC-ceeEEEccccCCccc
Q 033605 46 DVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASEN----AADLEL-DIDFVQCDIRNLEWR 111 (115)
Q Consensus 46 ~~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~----~~~~~~-~v~~~~~d~~~~~~~ 111 (115)
..++.+|||+|||+|.++..+++. +..+|+|+|+|+.|++.+.+. ....+. +++++++|++++|++
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~ 96 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPL 96 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSC
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCC
Confidence 347789999999999999999975 356999999999988864333 223444 899999999999876
No 71
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.54 E-value=7.1e-14 Score=87.61 Aligned_cols=77 Identities=13% Similarity=0.019 Sum_probs=63.3
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccC
Q 033605 35 RMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG 112 (115)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 112 (115)
.....++..+...++.+|||+|||+|.++..+++.+..+|+|+|+|+.+++.++++.... .+++++++|+.++++++
T Consensus 80 ~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~ 156 (254)
T 1xtp_A 80 EGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM-PVGKFILASMETATLPP 156 (254)
T ss_dssp HHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS-SEEEEEESCGGGCCCCS
T ss_pred HHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC-CceEEEEccHHHCCCCC
Confidence 334555566555678899999999999999998765668999999999999999988655 37999999999988764
No 72
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.54 E-value=3.5e-14 Score=88.89 Aligned_cols=64 Identities=20% Similarity=0.151 Sum_probs=56.8
Q ss_pred CCCeEEEEcCCCChHHHHHHhcC-CCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCccc
Q 033605 48 SNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR 111 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~ 111 (115)
++.+|||+|||+|.+++.+++.+ ..+|+++|+++.+++.|++++..++. +++++++|..+...+
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~ 87 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK 87 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCc
Confidence 66799999999999999999765 45899999999999999999999887 599999998775544
No 73
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.54 E-value=1.2e-14 Score=91.87 Aligned_cols=72 Identities=19% Similarity=0.195 Sum_probs=59.7
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccC
Q 033605 35 RMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG 112 (115)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 112 (115)
.+.+.+...+...++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.++++. +++++++|++++++++
T Consensus 21 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~d~~~~~~~~ 92 (261)
T 3ege_A 21 RIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQ-GLFVYAVEPSIVMRQQAVVHP-----QVEWFTGYAENLALPD 92 (261)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTT-TCEEEEECSCHHHHHSSCCCT-----TEEEECCCTTSCCSCT
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhC-CCEEEEEeCCHHHHHHHHhcc-----CCEEEECchhhCCCCC
Confidence 45555556656668889999999999999999985 459999999999998876554 7899999999998874
No 74
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.53 E-value=5e-14 Score=87.36 Aligned_cols=62 Identities=18% Similarity=0.167 Sum_probs=55.1
Q ss_pred CCCeEEEEcCCCChHHHHHHhcC-CCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEcccc-CCc
Q 033605 48 SNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIR-NLE 109 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~-~~~ 109 (115)
++.+|||+|||+|.+++.+++.+ ..+|+++|+++.+++.|++++..++. +++++++|.. .++
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~ 80 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFE 80 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcc
Confidence 66799999999999999999765 46899999999999999999999887 6999999984 444
No 75
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.53 E-value=4.1e-14 Score=86.35 Aligned_cols=65 Identities=17% Similarity=0.274 Sum_probs=56.8
Q ss_pred CCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCCcccC
Q 033605 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRG 112 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~ 112 (115)
++.+|||+|||+|..+..++.. +..+++|+|+|+.+++.++++....+. +++++++|+.+++..+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 131 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEP 131 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCS
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccC
Confidence 4779999999999999999964 567999999999999999999988777 7999999998876433
No 76
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.53 E-value=1.4e-13 Score=84.93 Aligned_cols=77 Identities=23% Similarity=0.363 Sum_probs=62.8
Q ss_pred HHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccC
Q 033605 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG 112 (115)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 112 (115)
...+.+.+....+ ++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++....+.+++++++|+.++++++
T Consensus 25 ~~~~~~~l~~~~~--~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~ 101 (227)
T 1ve3_A 25 IETLEPLLMKYMK--KRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFED 101 (227)
T ss_dssp HHHHHHHHHHSCC--SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCT
T ss_pred HHHHHHHHHHhcC--CCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCC
Confidence 3444555554433 477999999999999999987755 9999999999999999998776668999999999888654
No 77
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.53 E-value=5.7e-14 Score=87.49 Aligned_cols=65 Identities=23% Similarity=0.240 Sum_probs=57.7
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccCC
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGK 113 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~ 113 (115)
++.+|||+|||+|.++..+++.+ .+++|+|+|+.+++.++++....+.++.++++|+.++++++.
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~ 101 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKF-KNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRK 101 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGS-SEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCC
T ss_pred CCCeEEEeCCCCCHHHHHHHHCC-CcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCccCC
Confidence 67899999999999999999875 489999999999999999988776689999999998887644
No 78
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=99.53 E-value=1.4e-14 Score=91.33 Aligned_cols=74 Identities=11% Similarity=0.121 Sum_probs=58.3
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCe--EEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccC
Q 033605 35 RMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQ--VIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG 112 (115)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~--v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 112 (115)
.+++.+++.+...++.+|||+|||+|.++. +.. . .+ |+|+|+++.|++.++++....+ +++++++|+.++++++
T Consensus 8 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~~~~~~a~~~~~~~~-~v~~i~~D~~~~~~~~ 83 (252)
T 1qyr_A 8 FVIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDRDLAARLQTHPFLGP-KLTIYQQDAMTFNFGE 83 (252)
T ss_dssp HHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCHHHHHHHHTCTTTGG-GEEEECSCGGGCCHHH
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCHHHHHHHHHHhccCC-ceEEEECchhhCCHHH
Confidence 344445555555677899999999999999 654 3 36 9999999999999998875433 8999999999987653
No 79
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.53 E-value=2.2e-13 Score=83.09 Aligned_cols=63 Identities=40% Similarity=0.469 Sum_probs=56.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCCc
Q 033605 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLE 109 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~ 109 (115)
.++.+|||+|||+|.++..+++.+..+++|+|+++.+++.++++....+. +++++++|+.+.+
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 122 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV 122 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC
T ss_pred cCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC
Confidence 36789999999999999999887667999999999999999999988777 5999999997753
No 80
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.53 E-value=7.2e-14 Score=93.07 Aligned_cols=83 Identities=11% Similarity=0.148 Sum_probs=66.7
Q ss_pred chhhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHh-cCCCeEEEEeCChhHHHHHHHHhh-------ccC---Cc
Q 033605 29 GPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATL-LGADQVIAIDIDSDSLELASENAA-------DLE---LD 97 (115)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~~~~-------~~~---~~ 97 (115)
..+.....+..++..+...++.+|||||||+|.+++.++. .+..+++|||+++.+++.|+++.. ..+ .+
T Consensus 154 YGEt~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~r 233 (438)
T 3uwp_A 154 YGETSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAE 233 (438)
T ss_dssp GGGTHHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCE
T ss_pred cCCCCHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 3455666777777777778899999999999999999985 455569999999999999987642 222 37
Q ss_pred eeEEEccccCCccc
Q 033605 98 IDFVQCDIRNLEWR 111 (115)
Q Consensus 98 v~~~~~d~~~~~~~ 111 (115)
++++++|+.+++++
T Consensus 234 Vefi~GD~~~lp~~ 247 (438)
T 3uwp_A 234 YTLERGDFLSEEWR 247 (438)
T ss_dssp EEEEECCTTSHHHH
T ss_pred eEEEECcccCCccc
Confidence 99999999988864
No 81
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.53 E-value=4.9e-15 Score=90.57 Aligned_cols=81 Identities=22% Similarity=0.244 Sum_probs=50.4
Q ss_pred CCchhhHHHHHHHHHHhcCC-CCCCeEEEEcCCCChHHHHHHhcC-CCeEEEEeCChhHHHHHHHHhhccCCceeEEEcc
Q 033605 27 PTGPHIASRMLYTAENSFGD-VSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLELDIDFVQCD 104 (115)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~-~~~~~vLDlG~G~G~~~~~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d 104 (115)
..+...+..+++.+++.+.. .++.+|||+|||+|.++..+++.. ..+++|+|+++.+++.++++....+.+++++++|
T Consensus 8 ~~p~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d 87 (215)
T 4dzr_A 8 LIPRPDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAAD 87 (215)
T ss_dssp GSCCHHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHH
T ss_pred cCCCccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcc
Confidence 34556677788888877655 577899999999999999999753 4599999999999999999988776678888888
Q ss_pred ccC
Q 033605 105 IRN 107 (115)
Q Consensus 105 ~~~ 107 (115)
+.+
T Consensus 88 ~~~ 90 (215)
T 4dzr_A 88 GIE 90 (215)
T ss_dssp HHH
T ss_pred hHh
Confidence 866
No 82
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.52 E-value=5.6e-14 Score=88.74 Aligned_cols=68 Identities=13% Similarity=0.241 Sum_probs=59.2
Q ss_pred HhcCCC-CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCc
Q 033605 42 NSFGDV-SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLE 109 (115)
Q Consensus 42 ~~~~~~-~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~ 109 (115)
...... ++.+|||+|||+|.++..+++.+..+|+|+|+++.+++.|++++...+. +++++++|+.+++
T Consensus 42 ~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~ 112 (259)
T 3lpm_A 42 KFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKIT 112 (259)
T ss_dssp HHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGG
T ss_pred HHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhh
Confidence 333445 6789999999999999999976556999999999999999999998876 6999999998876
No 83
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.52 E-value=2.2e-13 Score=81.89 Aligned_cols=72 Identities=24% Similarity=0.299 Sum_probs=60.2
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC-c--eeEEEccccCC
Q 033605 36 MLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-D--IDFVQCDIRNL 108 (115)
Q Consensus 36 ~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~--v~~~~~d~~~~ 108 (115)
..+.+++.+...++.+|||+|||+|.++..+++. ..+++|+|+++.+++.++++....+. + ++++++|+.+.
T Consensus 40 ~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~ 114 (194)
T 1dus_A 40 GTKILVENVVVDKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN 114 (194)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT
T ss_pred HHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc
Confidence 3444455555557789999999999999999977 56999999999999999999987776 5 99999998774
No 84
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.52 E-value=1.4e-13 Score=89.12 Aligned_cols=77 Identities=13% Similarity=0.131 Sum_probs=64.7
Q ss_pred HHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCc
Q 033605 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLE 109 (115)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~ 109 (115)
....++.+++.+...++.+|||+|||+|.++..+++....+|+|+|+|+.+++.++++....+. +++++++|+.+++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 153 (318)
T 2fk8_A 75 QYAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA 153 (318)
T ss_dssp HHHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC
T ss_pred HHHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC
Confidence 4556667777777678889999999999999999965234999999999999999999887765 6999999998775
No 85
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.52 E-value=2.1e-14 Score=91.43 Aligned_cols=70 Identities=21% Similarity=0.328 Sum_probs=57.9
Q ss_pred HHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccCCC
Q 033605 40 AENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGKY 114 (115)
Q Consensus 40 ~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~f 114 (115)
+++.+...++.+|||+|||+|.++..+++. ..+|+|+|+|+.|++.++++. .++.++++|++++++++.|
T Consensus 49 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~f 118 (279)
T 3ccf_A 49 LLQLLNPQPGEFILDLGCGTGQLTEKIAQS-GAEVLGTDNAATMIEKARQNY----PHLHFDVADARNFRVDKPL 118 (279)
T ss_dssp HHHHHCCCTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHC----TTSCEEECCTTTCCCSSCE
T ss_pred HHHHhCCCCCCEEEEecCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHhhC----CCCEEEECChhhCCcCCCc
Confidence 344445557789999999999999999984 559999999999999999876 2688999999998876543
No 86
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.52 E-value=1.1e-13 Score=84.25 Aligned_cols=63 Identities=22% Similarity=0.239 Sum_probs=56.1
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccC
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG 112 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 112 (115)
++ +|||+|||+|.++..+++.+. +++|+|+|+.+++.++++....+.++.++++|+.++++++
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~ 92 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVA 92 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCT
T ss_pred CC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCc
Confidence 44 999999999999999987754 9999999999999999998877668999999999988764
No 87
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.52 E-value=3.4e-14 Score=90.70 Aligned_cols=65 Identities=23% Similarity=0.331 Sum_probs=57.7
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCcccC
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRG 112 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~ 112 (115)
++.+|||+|||+|.++..+++.+..+|+|+|+|+.+++.|++++..++. +++++++|+.+++...
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~ 191 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGEN 191 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCS
T ss_pred CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccC
Confidence 5789999999999999999987655899999999999999999988777 4999999999887643
No 88
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.52 E-value=7.2e-14 Score=84.73 Aligned_cols=63 Identities=22% Similarity=0.392 Sum_probs=55.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHhc--CCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCc
Q 033605 47 VSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLE 109 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~ 109 (115)
.++.+|||+|||+|..+..+++. +..+|+|+|+++.+++.++++....+. +++++++|+++++
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 87 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMD 87 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGG
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHh
Confidence 46789999999999999999965 346999999999999999999988776 8999999988775
No 89
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.52 E-value=1.9e-13 Score=84.75 Aligned_cols=72 Identities=17% Similarity=0.186 Sum_probs=61.6
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccC
Q 033605 34 SRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRN 107 (115)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~ 107 (115)
......+...+...++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.++++....+ +++++++|+.+
T Consensus 56 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~-~v~~~~~d~~~ 127 (231)
T 1vbf_A 56 LNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYN-NIKLILGDGTL 127 (231)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCS-SEEEEESCGGG
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcC-CeEEEECCccc
Confidence 3455566666666678899999999999999999875 699999999999999999988777 89999999987
No 90
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.52 E-value=1.4e-13 Score=85.62 Aligned_cols=76 Identities=28% Similarity=0.385 Sum_probs=61.9
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccCCC
Q 033605 35 RMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGKY 114 (115)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~f 114 (115)
...+.+...++ ++.+|||+|||+|.++..+++. .+++|+|+|+.+++.++++....+.+++++++|+.++++++.|
T Consensus 22 ~~~~~~~~~~~--~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~f 97 (243)
T 3d2l_A 22 EWVAWVLEQVE--PGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPV 97 (243)
T ss_dssp HHHHHHHHHSC--TTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCE
T ss_pred HHHHHHHHHcC--CCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCc
Confidence 34444555433 4579999999999999999876 5999999999999999999877666899999999988776543
No 91
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.52 E-value=8.7e-14 Score=92.12 Aligned_cols=79 Identities=23% Similarity=0.212 Sum_probs=64.8
Q ss_pred HHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCC-CeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCc
Q 033605 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGA-DQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLE 109 (115)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~ 109 (115)
...+...++... ..++.+|||+|||+|.++..++..+. .+|+|+|+++.+++.|++++...+. +++++++|+.+++
T Consensus 203 ~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~ 281 (373)
T 3tm4_A 203 KASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLS 281 (373)
T ss_dssp CHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGG
T ss_pred cHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCC
Confidence 344444444443 44778999999999999999997643 4899999999999999999998887 8999999999988
Q ss_pred ccC
Q 033605 110 WRG 112 (115)
Q Consensus 110 ~~~ 112 (115)
+++
T Consensus 282 ~~~ 284 (373)
T 3tm4_A 282 QYV 284 (373)
T ss_dssp GTC
T ss_pred ccc
Confidence 763
No 92
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.52 E-value=3.1e-14 Score=88.03 Aligned_cols=61 Identities=16% Similarity=0.223 Sum_probs=54.6
Q ss_pred CCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~ 108 (115)
++.+|||+|||+|.++..+++. +...|+|+|+|+.++..|+++....+. |+.++++|+.++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~ 96 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEV 96 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHH
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHH
Confidence 5679999999999999999964 456899999999999999999988877 899999998774
No 93
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.52 E-value=1.5e-13 Score=86.35 Aligned_cols=73 Identities=23% Similarity=0.250 Sum_probs=60.2
Q ss_pred HHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCc
Q 033605 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE 109 (115)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 109 (115)
..+....++..+...++.+|||+|||+|.++..+++. +..+++|+|+|+.+++.++++. .+++++++|+++++
T Consensus 18 ~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~----~~~~~~~~d~~~~~ 91 (259)
T 2p35_A 18 RTRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL----PNTNFGKADLATWK 91 (259)
T ss_dssp GGHHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS----TTSEEEECCTTTCC
T ss_pred HHHHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC----CCcEEEECChhhcC
Confidence 3444556666666667889999999999999999864 4569999999999999999873 27899999999887
No 94
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.51 E-value=2.5e-13 Score=85.40 Aligned_cols=81 Identities=21% Similarity=0.336 Sum_probs=62.6
Q ss_pred hhHHHHHHHHHH-hcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCc
Q 033605 31 HIASRMLYTAEN-SFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE 109 (115)
Q Consensus 31 ~~~~~~~~~~~~-~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 109 (115)
.....+.+.+.. .....++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.++++......++.++++|+++++
T Consensus 21 ~~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~ 99 (263)
T 2yqz_A 21 EVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARG-YRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIP 99 (263)
T ss_dssp HHHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTT-CEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCC
T ss_pred HHHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCC
Confidence 334445555433 2133467899999999999999999774 59999999999999999988322338999999999988
Q ss_pred ccC
Q 033605 110 WRG 112 (115)
Q Consensus 110 ~~~ 112 (115)
+++
T Consensus 100 ~~~ 102 (263)
T 2yqz_A 100 LPD 102 (263)
T ss_dssp SCT
T ss_pred CCC
Confidence 765
No 95
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.51 E-value=2.3e-13 Score=86.77 Aligned_cols=71 Identities=23% Similarity=0.368 Sum_probs=58.9
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCc
Q 033605 37 LYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLE 109 (115)
Q Consensus 37 ~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~ 109 (115)
+..++..+.. ++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++....+. +++++++|+.+++
T Consensus 58 l~~~l~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 130 (285)
T 4htf_A 58 LDRVLAEMGP-QKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVA 130 (285)
T ss_dssp HHHHHHHTCS-SCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTG
T ss_pred HHHHHHhcCC-CCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhh
Confidence 3344444443 467999999999999999998744 999999999999999999988775 7999999999887
No 96
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.51 E-value=8.6e-14 Score=88.80 Aligned_cols=66 Identities=23% Similarity=0.315 Sum_probs=60.0
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCcccCC
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGK 113 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~ 113 (115)
++.+|||+|||+|.+++.+++.+.++|+++|++|.+++.+++|+..++. +++++++|+.+++....
T Consensus 125 ~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~ 192 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENI 192 (278)
T ss_dssp TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSC
T ss_pred CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccC
Confidence 7889999999999999999988777999999999999999999999887 69999999988775544
No 97
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.51 E-value=1.2e-13 Score=88.34 Aligned_cols=64 Identities=22% Similarity=0.222 Sum_probs=57.2
Q ss_pred CCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCcc
Q 033605 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEW 110 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~ 110 (115)
.++.+|||+|||+|..+..+++.+..+++|+|+|+.+++.++++....+. +++++++|+.+.++
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 128 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM 128 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCcccccc
Confidence 47789999999999999998877666999999999999999999887665 79999999998876
No 98
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.51 E-value=2e-13 Score=86.18 Aligned_cols=75 Identities=16% Similarity=0.232 Sum_probs=59.9
Q ss_pred HHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccC
Q 033605 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG 112 (115)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 112 (115)
...+.+.+.... .++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++.. +++++++|+.++++++
T Consensus 37 ~~~~~~~l~~~~--~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~----~~~~~~~d~~~~~~~~ 109 (263)
T 3pfg_A 37 AADLAALVRRHS--PKAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIARRRNP----DAVLHHGDMRDFSLGR 109 (263)
T ss_dssp HHHHHHHHHHHC--TTCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHHHHHCT----TSEEEECCTTTCCCSC
T ss_pred HHHHHHHHHhhC--CCCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCC----CCEEEECChHHCCccC
Confidence 344444444442 2567999999999999999998754 99999999999999999865 6899999999988754
Q ss_pred CC
Q 033605 113 KY 114 (115)
Q Consensus 113 ~f 114 (115)
.|
T Consensus 110 ~f 111 (263)
T 3pfg_A 110 RF 111 (263)
T ss_dssp CE
T ss_pred Cc
Confidence 43
No 99
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.51 E-value=1.9e-13 Score=89.89 Aligned_cols=81 Identities=26% Similarity=0.184 Sum_probs=67.0
Q ss_pred hHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc--CCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCC
Q 033605 32 IASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNL 108 (115)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~ 108 (115)
..+.+...++......++.+|||+|||+|.++..++.. +..+++|+|+++.+++.|++++...+. +++++++|+.++
T Consensus 187 l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~ 266 (354)
T 3tma_A 187 LTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHL 266 (354)
T ss_dssp CCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGG
T ss_pred cCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhC
Confidence 34445555555555567789999999999999999964 346999999999999999999998887 799999999998
Q ss_pred cccC
Q 033605 109 EWRG 112 (115)
Q Consensus 109 ~~~~ 112 (115)
+.+.
T Consensus 267 ~~~~ 270 (354)
T 3tma_A 267 PRFF 270 (354)
T ss_dssp GGTC
T ss_pred cccc
Confidence 7654
No 100
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.50 E-value=5.2e-14 Score=87.43 Aligned_cols=63 Identities=19% Similarity=0.238 Sum_probs=52.7
Q ss_pred CCCeEEEEcCCCChHHHHHHh-cCCCeEEEEeCC-hhHHHHH---HHHhhccCC-ceeEEEccccCCcc
Q 033605 48 SNKVVADFGCGCGTLGAAATL-LGADQVIAIDID-SDSLELA---SENAADLEL-DIDFVQCDIRNLEW 110 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~-~~~~~v~~vD~s-~~~~~~a---~~~~~~~~~-~v~~~~~d~~~~~~ 110 (115)
++.+|||+|||+|.++..+++ .+..+|+|+|+| +.|++.| +++....+. ++.++++|++++|.
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~ 92 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPF 92 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCG
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhh
Confidence 678999999999999999985 445689999999 6666666 777777676 89999999998863
No 101
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.50 E-value=2.7e-13 Score=93.97 Aligned_cols=60 Identities=20% Similarity=0.346 Sum_probs=55.4
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~ 108 (115)
++.+|||||||.|.++..+++.++ +|+|||+++.+++.|+..+.+.+. ++++.+++++++
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~ 126 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEV 126 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHH
T ss_pred CCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHH
Confidence 677999999999999999999866 999999999999999999888774 999999999887
No 102
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.50 E-value=3.1e-13 Score=80.49 Aligned_cols=69 Identities=19% Similarity=0.212 Sum_probs=56.5
Q ss_pred HHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccC
Q 033605 38 YTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRN 107 (115)
Q Consensus 38 ~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~ 107 (115)
..++..+...++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.++++....+. ++ ++++|+.+
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~ 86 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPR 86 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTG
T ss_pred HHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHh
Confidence 34444545567789999999999999999865 457999999999999999999888766 67 88888743
No 103
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.49 E-value=2e-13 Score=86.62 Aligned_cols=77 Identities=23% Similarity=0.333 Sum_probs=63.7
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCCcccC
Q 033605 36 MLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRG 112 (115)
Q Consensus 36 ~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~ 112 (115)
+...+.......++.+|||+|||+|.++..+++. +..+++|+|+|+.+++.++++....+. +++++++|+.++++++
T Consensus 25 l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~ 103 (276)
T 3mgg_A 25 LEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFED 103 (276)
T ss_dssp HHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCT
T ss_pred HHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCC
Confidence 3344444444457889999999999999999965 356999999999999999999988776 8999999999988764
No 104
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.49 E-value=2.2e-13 Score=85.64 Aligned_cols=76 Identities=13% Similarity=0.083 Sum_probs=59.8
Q ss_pred hHHHHHHHHHHhcCC--CCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEcccc
Q 033605 32 IASRMLYTAENSFGD--VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIR 106 (115)
Q Consensus 32 ~~~~~~~~~~~~~~~--~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~ 106 (115)
....++..++..... .++.+|||+|||+|.++..++.. +..+|+|+|+|+.|++.|+++....+. +++++++|+.
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 126 (254)
T 2h00_A 47 NYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQK 126 (254)
T ss_dssp HHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred HHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchh
Confidence 344555555544332 25679999999999999988853 346999999999999999999988776 4999999976
Q ss_pred C
Q 033605 107 N 107 (115)
Q Consensus 107 ~ 107 (115)
+
T Consensus 127 ~ 127 (254)
T 2h00_A 127 T 127 (254)
T ss_dssp C
T ss_pred h
Confidence 5
No 105
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.49 E-value=1.9e-13 Score=80.95 Aligned_cols=59 Identities=20% Similarity=0.259 Sum_probs=53.0
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccC
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRN 107 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~ 107 (115)
++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++....+.+++++++|+.+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~ 99 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEV 99 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHH
Confidence 667999999999999999998755 59999999999999999988776688999999876
No 106
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.49 E-value=1.1e-13 Score=86.43 Aligned_cols=63 Identities=17% Similarity=0.311 Sum_probs=52.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhc------cCC-ceeEEEccccC-Cc
Q 033605 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAAD------LEL-DIDFVQCDIRN-LE 109 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~------~~~-~v~~~~~d~~~-~~ 109 (115)
.++.+|||||||+|.++..+++. +...++|+|+|+.|++.|++++.. .+. |+.++++|+.+ ++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~ 116 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLP 116 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHH
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhh
Confidence 35678999999999999999964 457999999999999999987653 333 89999999986 55
No 107
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.49 E-value=2.3e-13 Score=96.95 Aligned_cols=82 Identities=20% Similarity=0.287 Sum_probs=64.3
Q ss_pred hhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCC--CeEEEEeCChhHHHHHHHHhhc------cCC-ceeEE
Q 033605 31 HIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGA--DQVIAIDIDSDSLELASENAAD------LEL-DIDFV 101 (115)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~--~~v~~vD~s~~~~~~a~~~~~~------~~~-~v~~~ 101 (115)
......++.+.+.+...++.+|||+|||+|.++..+++.+. .+|+|+|+|+.|++.|++++.. .+. +++++
T Consensus 704 PL~eqRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefi 783 (950)
T 3htx_A 704 PLSKQRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLY 783 (950)
T ss_dssp CHHHHHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEE
T ss_pred hHHHHHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEE
Confidence 34444555555554445788999999999999999997652 6999999999999999986542 233 79999
Q ss_pred EccccCCcccC
Q 033605 102 QCDIRNLEWRG 112 (115)
Q Consensus 102 ~~d~~~~~~~~ 112 (115)
++|+.++++++
T Consensus 784 qGDa~dLp~~d 794 (950)
T 3htx_A 784 DGSILEFDSRL 794 (950)
T ss_dssp ESCTTSCCTTS
T ss_pred ECchHhCCccc
Confidence 99999998764
No 108
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.49 E-value=1.3e-13 Score=88.89 Aligned_cols=73 Identities=19% Similarity=0.281 Sum_probs=60.9
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCc
Q 033605 37 LYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE 109 (115)
Q Consensus 37 ~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 109 (115)
++.+++.+...++.+|||+|||+|.++..+++. +..+|+|+|+|+.|++.|+++....+.+++++++|+.+++
T Consensus 15 l~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~ 88 (301)
T 1m6y_A 15 VREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREAD 88 (301)
T ss_dssp HHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHH
T ss_pred HHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHH
Confidence 344444545557789999999999999999975 3569999999999999999998877668999999998765
No 109
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.49 E-value=2e-13 Score=84.62 Aligned_cols=72 Identities=21% Similarity=0.167 Sum_probs=56.8
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccc-cCCccc
Q 033605 34 SRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDI-RNLEWR 111 (115)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~-~~~~~~ 111 (115)
..++..+..... .++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.++++.. +++++++|+ +.+|++
T Consensus 35 ~~l~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~----~~~~~~~d~~~~~~~~ 107 (226)
T 3m33_A 35 ELTFDLWLSRLL-TPQTRVLEAGCGHGPDAARFGPQA-ARWAAYDFSPELLKLARANAP----HADVYEWNGKGELPAG 107 (226)
T ss_dssp THHHHHHHHHHC-CTTCEEEEESCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHHCT----TSEEEECCSCSSCCTT
T ss_pred HHHHHHHHHhcC-CCCCeEEEeCCCCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHhCC----CceEEEcchhhccCCc
Confidence 344444443322 467899999999999999999874 499999999999999998822 789999999 567765
No 110
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.49 E-value=1.2e-13 Score=86.20 Aligned_cols=65 Identities=18% Similarity=0.215 Sum_probs=57.0
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCCcccC
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRG 112 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~ 112 (115)
++.+|||+|||+|.++..+++....+|+|+|+|+.+++.++++....+. +++++++|+.++++++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~ 144 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEP 144 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCS
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCC
Confidence 5789999999999999999876566999999999999999999877633 7899999999888765
No 111
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.49 E-value=1.2e-13 Score=85.80 Aligned_cols=65 Identities=22% Similarity=0.165 Sum_probs=55.5
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCcccCC
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGK 113 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~ 113 (115)
++.+|||+|||+|..+..+++. ..+|+|+|+|+.+++.++++....+. +++++++|+.+++....
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 132 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP-ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTEL 132 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT-TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSC
T ss_pred CCCCEEEeCCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCC
Confidence 4569999999999999999875 44899999999999999999876443 79999999998875543
No 112
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.48 E-value=1.5e-13 Score=85.56 Aligned_cols=61 Identities=8% Similarity=0.176 Sum_probs=53.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCccc
Q 033605 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR 111 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~ 111 (115)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++... +++++++|+++++.+
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~---~v~~~~~d~~~~~~~ 101 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD---GITYIHSRFEDAQLP 101 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS---CEEEEESCGGGCCCS
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC---CeEEEEccHHHcCcC
Confidence 4677999999999999999998755 899999999999999998765 689999999887433
No 113
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.48 E-value=3.4e-13 Score=85.49 Aligned_cols=80 Identities=19% Similarity=0.174 Sum_probs=63.7
Q ss_pred HHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc-CC-CeEEEEeCChh------HHHHHHHHhhccCC--ceeEEE
Q 033605 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GA-DQVIAIDIDSD------SLELASENAADLEL--DIDFVQ 102 (115)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~-~~-~~v~~vD~s~~------~~~~a~~~~~~~~~--~v~~~~ 102 (115)
.......+++.+...++.+|||+|||+|.++..+++. +. .+|+|+|+|+. +++.++++....+. ++++++
T Consensus 28 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~ 107 (275)
T 3bkx_A 28 QTAHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHF 107 (275)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEEC
T ss_pred HHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEE
Confidence 3445556666666778889999999999999999965 33 69999999997 99999999887765 799999
Q ss_pred cc---ccCCcccC
Q 033605 103 CD---IRNLEWRG 112 (115)
Q Consensus 103 ~d---~~~~~~~~ 112 (115)
+| ...+++++
T Consensus 108 ~d~~~~~~~~~~~ 120 (275)
T 3bkx_A 108 NTNLSDDLGPIAD 120 (275)
T ss_dssp SCCTTTCCGGGTT
T ss_pred CChhhhccCCCCC
Confidence 98 45555543
No 114
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.48 E-value=2.5e-13 Score=85.97 Aligned_cols=58 Identities=22% Similarity=0.038 Sum_probs=49.1
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhcc
Q 033605 36 MLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADL 94 (115)
Q Consensus 36 ~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 94 (115)
..+.++......++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.++++....
T Consensus 33 ~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~ 90 (261)
T 3iv6_A 33 DRENDIFLENIVPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADR 90 (261)
T ss_dssp HHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSS
T ss_pred HHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhc
Confidence 445555666667888999999999999999998755 9999999999999999998754
No 115
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.48 E-value=3.2e-13 Score=89.30 Aligned_cols=80 Identities=20% Similarity=0.259 Sum_probs=66.2
Q ss_pred CCchhhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccc
Q 033605 27 PTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDI 105 (115)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~ 105 (115)
+.+......+...+.+.... .+.+|||+|||+|.+++.+++. ..+|+|+|+++.+++.|++++..++. +++++++|+
T Consensus 193 Q~n~~~~~~l~~~~~~~~~~-~~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~ 270 (369)
T 3bt7_A 193 QPNAAMNIQMLEWALDVTKG-SKGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAA 270 (369)
T ss_dssp CSBHHHHHHHHHHHHHHTTT-CCSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCS
T ss_pred cCCHHHHHHHHHHHHHHhhc-CCCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCH
Confidence 34455567777777776543 3578999999999999999874 55999999999999999999988887 899999998
Q ss_pred cCC
Q 033605 106 RNL 108 (115)
Q Consensus 106 ~~~ 108 (115)
+++
T Consensus 271 ~~~ 273 (369)
T 3bt7_A 271 EEF 273 (369)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 116
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.48 E-value=9.9e-14 Score=89.43 Aligned_cols=68 Identities=28% Similarity=0.247 Sum_probs=59.1
Q ss_pred CCCCCeEEEEcCCCChHHHHHH--hcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCcccCC
Q 033605 46 DVSNKVVADFGCGCGTLGAAAT--LLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGK 113 (115)
Q Consensus 46 ~~~~~~vLDlG~G~G~~~~~~~--~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~ 113 (115)
..++.+|||+|||+|..+..++ ..+..+|+|+|+|+.+++.++++....+. +++++++|+.++++++.
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 187 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREG 187 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCC
Confidence 3477899999999999999985 34567999999999999999999988776 59999999999887644
No 117
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.48 E-value=2.8e-13 Score=85.48 Aligned_cols=76 Identities=28% Similarity=0.368 Sum_probs=60.0
Q ss_pred hhhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccC
Q 033605 30 PHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRN 107 (115)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~ 107 (115)
.+.+.+.....+... ..++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.++++...++.+++++++|+.+
T Consensus 103 ~~~tt~~~~~~l~~~-~~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~ 178 (254)
T 2nxc_A 103 HHETTRLALKALARH-LRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA 178 (254)
T ss_dssp CSHHHHHHHHHHHHH-CCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH
T ss_pred CCHHHHHHHHHHHHh-cCCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhh
Confidence 334444444444433 34678999999999999999988766 99999999999999999988776668888888765
No 118
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.47 E-value=5.1e-13 Score=88.66 Aligned_cols=78 Identities=21% Similarity=0.307 Sum_probs=63.9
Q ss_pred HHHHHHHHHHhcC--CCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcc
Q 033605 33 ASRMLYTAENSFG--DVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW 110 (115)
Q Consensus 33 ~~~~~~~~~~~~~--~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~ 110 (115)
+..+++.+..... ..++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++....+.+++++++|+.+.+.
T Consensus 216 t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~ 294 (381)
T 3dmg_A 216 SLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALT 294 (381)
T ss_dssp HHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSC
T ss_pred HHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccc
Confidence 3445555544432 33677999999999999999998754 99999999999999999999888789999999988776
Q ss_pred c
Q 033605 111 R 111 (115)
Q Consensus 111 ~ 111 (115)
+
T Consensus 295 ~ 295 (381)
T 3dmg_A 295 E 295 (381)
T ss_dssp T
T ss_pred c
Confidence 5
No 119
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.47 E-value=3.6e-13 Score=87.39 Aligned_cols=76 Identities=18% Similarity=0.138 Sum_probs=63.1
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcC--CCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCCcc
Q 033605 35 RMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLG--ADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW 110 (115)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~ 110 (115)
.....+...+...++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.++++....+. +++++++|+.+.+.
T Consensus 62 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~ 140 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVP 140 (317)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG
T ss_pred HHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccc
Confidence 455566666666688899999999999999998653 24799999999999999999988776 79999999987543
No 120
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.47 E-value=2.5e-13 Score=82.83 Aligned_cols=66 Identities=20% Similarity=0.266 Sum_probs=54.6
Q ss_pred CCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG 112 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 112 (115)
.++.+|||+|||+|..+..++.....+++|+|+|+.+++.++++....+.+++++++|+.++++++
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~ 87 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKD 87 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCC
Confidence 357899999999999855544333459999999999999999998766668999999999988764
No 121
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.47 E-value=4.5e-13 Score=85.29 Aligned_cols=64 Identities=23% Similarity=0.257 Sum_probs=57.2
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCCc
Q 033605 46 DVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLE 109 (115)
Q Consensus 46 ~~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~ 109 (115)
..++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.|++++..++. ++.++++|+.+++
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~ 182 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVE 182 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCC
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcC
Confidence 346789999999999999999975 456999999999999999999998887 8999999998873
No 122
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.47 E-value=2.4e-13 Score=83.58 Aligned_cols=63 Identities=14% Similarity=0.105 Sum_probs=49.7
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 45 GDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 45 ~~~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
...++.+|||+|||+|..+..+++. +..+|+|+|+|+.|++.+.+...... ++.++.+|+...
T Consensus 54 ~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~-~v~~~~~d~~~~ 117 (210)
T 1nt2_A 54 KLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERN-NIIPLLFDASKP 117 (210)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCS-SEEEECSCTTCG
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCC-CeEEEEcCCCCc
Confidence 3457789999999999999999864 34599999999998876666554433 788899998763
No 123
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.47 E-value=4.5e-13 Score=81.49 Aligned_cols=60 Identities=23% Similarity=0.357 Sum_probs=53.1
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccC
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG 112 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 112 (115)
.+.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++.. +++++++|+.++++++
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~----~~~~~~~d~~~~~~~~ 100 (203)
T 3h2b_A 41 VDGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTHP----SVTFHHGTITDLSDSP 100 (203)
T ss_dssp CCSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHCT----TSEEECCCGGGGGGSC
T ss_pred CCCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhCC----CCeEEeCcccccccCC
Confidence 378999999999999999998755 99999999999999998743 6899999999988764
No 124
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.46 E-value=2.6e-13 Score=85.09 Aligned_cols=60 Identities=18% Similarity=0.360 Sum_probs=52.5
Q ss_pred CCCeEEEEcCCCChHHHHHHhcC-CCeEEEEeCChhHHHHHHHHhhcc--------CC-ceeEEEccccC
Q 033605 48 SNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADL--------EL-DIDFVQCDIRN 107 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~--------~~-~v~~~~~d~~~ 107 (115)
++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.+++++... +. ++.++++|+.+
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~ 118 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMK 118 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTS
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHH
Confidence 56799999999999999999754 458999999999999999987754 55 89999999886
No 125
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.46 E-value=6.2e-13 Score=81.24 Aligned_cols=65 Identities=20% Similarity=0.314 Sum_probs=56.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG 112 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 112 (115)
.++.+|||+|||+|.++..+++.+..+++|+|+|+.+++.++++.... .+++++++|+.++++++
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~-~~i~~~~~d~~~~~~~~ 105 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHV-PQLRWETMDVRKLDFPS 105 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTC-TTCEEEECCTTSCCSCS
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccC-CCcEEEEcchhcCCCCC
Confidence 467899999999999999999876559999999999999999988652 27999999999888764
No 126
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.46 E-value=3.4e-13 Score=81.42 Aligned_cols=65 Identities=20% Similarity=0.218 Sum_probs=51.3
Q ss_pred CCCCeEEEEcCCCChHHHHHHh-cCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCccc
Q 033605 47 VSNKVVADFGCGCGTLGAAATL-LGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR 111 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~ 111 (115)
.++.+|||+|||+|.++..++. .+..+|+++|+|+.|++.+++++...+....+...|....+.+
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~~~~ 113 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESDVYK 113 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHHHTT
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEecccccCCC
Confidence 3678999999999999999985 4456999999999999999999998877323333665544443
No 127
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.46 E-value=8.9e-13 Score=80.61 Aligned_cols=67 Identities=15% Similarity=0.166 Sum_probs=54.2
Q ss_pred HHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccC
Q 033605 38 YTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG 112 (115)
Q Consensus 38 ~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 112 (115)
..++..+.. ++.+|||+|||+|.++..+ +..+++|+|+|+.+++.++++. .++.++++|+.++++++
T Consensus 27 ~~~l~~~~~-~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~~~ 93 (211)
T 2gs9_A 27 ERALKGLLP-PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA----PEATWVRAWGEALPFPG 93 (211)
T ss_dssp HHHHHTTCC-CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC----TTSEEECCCTTSCCSCS
T ss_pred HHHHHHhcC-CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcccccCCCCC
Confidence 334444333 7789999999999998877 3349999999999999999887 26899999999988765
No 128
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.46 E-value=4.9e-13 Score=82.70 Aligned_cols=64 Identities=27% Similarity=0.483 Sum_probs=57.1
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC------ceeEEEccccCCcccC
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL------DIDFVQCDIRNLEWRG 112 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~v~~~~~d~~~~~~~~ 112 (115)
++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++....+. ++.++++|+..+++++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 99 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHD 99 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCT
T ss_pred CCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCC
Confidence 678999999999999999998744 999999999999999999887665 6899999999988765
No 129
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.46 E-value=4.7e-15 Score=93.09 Aligned_cols=74 Identities=22% Similarity=0.339 Sum_probs=60.5
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCccc
Q 033605 36 MLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR 111 (115)
Q Consensus 36 ~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~ 111 (115)
..+.+++.+...++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.++++... ..+++++++|+.+++++
T Consensus 17 ~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~~-~~~v~~~~~D~~~~~~~ 90 (245)
T 1yub_A 17 VLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLKL-NTRVTLIHQDILQFQFP 90 (245)
T ss_dssp THHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTTT-CSEEEECCSCCTTTTCC
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhcc-CCceEEEECChhhcCcc
Confidence 34444555555678899999999999999999875 6999999999999998887652 22899999999998876
No 130
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.46 E-value=2.7e-13 Score=84.38 Aligned_cols=61 Identities=13% Similarity=0.220 Sum_probs=54.7
Q ss_pred CCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~ 108 (115)
++.+|||+|||+|..+..+++. +..+|+++|+++.+++.|++++...+. +++++++|+.+.
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 134 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQ 134 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH
Confidence 6789999999999999999973 357999999999999999999988776 799999999764
No 131
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.46 E-value=6.3e-13 Score=82.70 Aligned_cols=71 Identities=24% Similarity=0.388 Sum_probs=58.8
Q ss_pred HHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccC
Q 033605 40 AENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG 112 (115)
Q Consensus 40 ~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 112 (115)
+...+...++.+|||+|||+|..+..+++.+..+++|+|+|+.+++.++++.... +++++++|+.++++++
T Consensus 35 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~d~~~~~~~~ 105 (243)
T 3bkw_A 35 LRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDT--GITYERADLDKLHLPQ 105 (243)
T ss_dssp HHHHSCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCSS--SEEEEECCGGGCCCCT
T ss_pred HHHhccccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcccC--CceEEEcChhhccCCC
Confidence 3444455577899999999999999999775559999999999999999887542 6899999999888754
No 132
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.46 E-value=1.4e-13 Score=86.51 Aligned_cols=63 Identities=35% Similarity=0.393 Sum_probs=50.4
Q ss_pred hHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc---CCCeEEEEeCChhHHHHHHHHhhcc
Q 033605 32 IASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL---GADQVIAIDIDSDSLELASENAADL 94 (115)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~---~~~~v~~vD~s~~~~~~a~~~~~~~ 94 (115)
....++..++......++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|+++....
T Consensus 35 la~~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~ 100 (250)
T 1o9g_A 35 LATEIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALL 100 (250)
T ss_dssp HHHHHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHh
Confidence 34466777666655446779999999999999999864 3469999999999999999887655
No 133
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.46 E-value=7.1e-13 Score=82.08 Aligned_cols=62 Identities=18% Similarity=0.208 Sum_probs=54.6
Q ss_pred CCCCCeEEEEcCC-CChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccC
Q 033605 46 DVSNKVVADFGCG-CGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRN 107 (115)
Q Consensus 46 ~~~~~~vLDlG~G-~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~ 107 (115)
..++.+|||+||| +|.++..+++....+|+|+|+++.+++.|+++....+.+++++++|+..
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~ 115 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGI 115 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCS
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchh
Confidence 3477899999999 9999999997635599999999999999999998887789999999643
No 134
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.45 E-value=9.6e-13 Score=88.45 Aligned_cols=78 Identities=21% Similarity=0.229 Sum_probs=64.4
Q ss_pred CchhhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccC
Q 033605 28 TGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRN 107 (115)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~ 107 (115)
.+......+.+.+.+ ..++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|+++...++.+++++++|+.+
T Consensus 273 ~n~~~~e~l~~~~~~---~~~~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~ 348 (425)
T 2jjq_A 273 TNSYQAVNLVRKVSE---LVEGEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDRE 348 (425)
T ss_dssp SBHHHHHHHHHHHHH---HCCSSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTT
T ss_pred cCHHHHHHHHHHhhc---cCCCCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHH
Confidence 345556666666665 246789999999999999999986 4599999999999999999998776669999999988
Q ss_pred Cc
Q 033605 108 LE 109 (115)
Q Consensus 108 ~~ 109 (115)
+.
T Consensus 349 ~~ 350 (425)
T 2jjq_A 349 VS 350 (425)
T ss_dssp CC
T ss_pred cC
Confidence 64
No 135
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.45 E-value=6.8e-13 Score=82.62 Aligned_cols=72 Identities=15% Similarity=0.138 Sum_probs=59.6
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccc
Q 033605 34 SRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDI 105 (115)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~ 105 (115)
..+...+.+.+...++.+|||+|||+|.++..+++....+|+++|+++.+++.++++....+. +++++.+|+
T Consensus 77 ~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~ 149 (235)
T 1jg1_A 77 PHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG 149 (235)
T ss_dssp HHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG
T ss_pred HHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc
Confidence 334455555556667889999999999999999975326999999999999999999988776 899999997
No 136
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.45 E-value=7.2e-13 Score=79.54 Aligned_cols=71 Identities=20% Similarity=0.240 Sum_probs=59.3
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccC
Q 033605 36 MLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRN 107 (115)
Q Consensus 36 ~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~ 107 (115)
+...+.......++.+|||+|||+|..+..+++.. .+++++|+++.+++.++++....+. +++++++|+.+
T Consensus 21 ~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 93 (192)
T 1l3i_A 21 VRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE 93 (192)
T ss_dssp HHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH
T ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH
Confidence 33444444456678899999999999999999766 6999999999999999999887765 79999999866
No 137
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.45 E-value=8.8e-13 Score=80.90 Aligned_cols=74 Identities=18% Similarity=0.157 Sum_probs=60.2
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcC--CCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccC
Q 033605 34 SRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLG--ADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRN 107 (115)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~ 107 (115)
......+...+...++.+|||+|||+|.++..+++.. ..+|+++|+++.+++.++++....+. +++++++|+..
T Consensus 63 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~ 139 (215)
T 2yxe_A 63 IHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTL 139 (215)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGG
T ss_pred HHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCccc
Confidence 3444455555566678899999999999999999653 26999999999999999999887765 79999999854
No 138
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.45 E-value=6.2e-13 Score=79.20 Aligned_cols=71 Identities=18% Similarity=0.261 Sum_probs=54.3
Q ss_pred CchhhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccC
Q 033605 28 TGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRN 107 (115)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~ 107 (115)
.+...+..+++.+... . .++.+|||+|||+|.++..+++.+ +|+|+|+|+.|++. ..+++++++|+.+
T Consensus 5 ~P~~~~~~l~~~l~~~-~-~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~--------~~~~~~~~~d~~~ 72 (170)
T 3q87_B 5 EPGEDTYTLMDALERE-G-LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES--------HRGGNLVRADLLC 72 (170)
T ss_dssp CCCHHHHHHHHHHHHH-T-CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT--------CSSSCEEECSTTT
T ss_pred CcCccHHHHHHHHHhh-c-CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc--------ccCCeEEECChhh
Confidence 4455566666664331 1 366799999999999999999875 99999999999988 2278999999987
Q ss_pred Cccc
Q 033605 108 LEWR 111 (115)
Q Consensus 108 ~~~~ 111 (115)
+++
T Consensus 73 -~~~ 75 (170)
T 3q87_B 73 -SIN 75 (170)
T ss_dssp -TBC
T ss_pred -hcc
Confidence 443
No 139
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.45 E-value=5e-13 Score=82.79 Aligned_cols=82 Identities=12% Similarity=0.120 Sum_probs=64.2
Q ss_pred CCchhhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc-C-CCeEEEEeCChhHHHHHHHHhhccCC---ceeEE
Q 033605 27 PTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL---DIDFV 101 (115)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~---~v~~~ 101 (115)
+........++..+....+..++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.|++++...+. +++++
T Consensus 35 p~i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~ 114 (221)
T 3dr5_A 35 PAPDEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFL 114 (221)
T ss_dssp CCCCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred CCCCHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEE
Confidence 3344555666666666544334459999999999999999963 3 56999999999999999999987665 59999
Q ss_pred EccccCC
Q 033605 102 QCDIRNL 108 (115)
Q Consensus 102 ~~d~~~~ 108 (115)
++|+.++
T Consensus 115 ~gda~~~ 121 (221)
T 3dr5_A 115 LSRPLDV 121 (221)
T ss_dssp CSCHHHH
T ss_pred EcCHHHH
Confidence 9998664
No 140
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.44 E-value=7.4e-13 Score=82.42 Aligned_cols=73 Identities=21% Similarity=0.345 Sum_probs=59.3
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccC
Q 033605 35 RMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG 112 (115)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 112 (115)
.+...+....+ ++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++.. ..+++++++|+.++++++
T Consensus 42 ~~~~~l~~~~~--~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~~~~~ 114 (242)
T 3l8d_A 42 TIIPFFEQYVK--KEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERGE--GPDLSFIKGDLSSLPFEN 114 (242)
T ss_dssp THHHHHHHHSC--TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTTC--BTTEEEEECBTTBCSSCT
T ss_pred HHHHHHHHHcC--CCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhcc--cCCceEEEcchhcCCCCC
Confidence 44555554433 677999999999999999998754 99999999999999998752 237999999999998764
No 141
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.44 E-value=7e-13 Score=85.71 Aligned_cols=62 Identities=19% Similarity=0.279 Sum_probs=53.4
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhcc-------CC-ceeEEEccccCCc
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADL-------EL-DIDFVQCDIRNLE 109 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~-~v~~~~~d~~~~~ 109 (115)
++.+|||+|||+|..+..+++.+..+++|+|+|+.+++.++++.... .. +++++++|+++++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 103 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKEL 103 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccc
Confidence 67799999999999999998765679999999999999999987653 22 7999999999886
No 142
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.44 E-value=1.3e-12 Score=82.04 Aligned_cols=73 Identities=22% Similarity=0.206 Sum_probs=61.5
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc-C-CCeEEEEeCChhHHHHHHHHhhccCC-c-eeEEEccccCC
Q 033605 36 MLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL-D-IDFVQCDIRNL 108 (115)
Q Consensus 36 ~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~-v~~~~~d~~~~ 108 (115)
....+.......++.+|||+|||+|.++..+++. + ..+++++|+++.+++.|+++....+. + ++++++|+.+.
T Consensus 81 ~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 157 (255)
T 3mb5_A 81 DAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG 157 (255)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC
T ss_pred HHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc
Confidence 3445556666678889999999999999999965 3 56999999999999999999988776 4 99999999864
No 143
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.44 E-value=1.8e-12 Score=81.40 Aligned_cols=76 Identities=16% Similarity=0.175 Sum_probs=63.0
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc-C-CCeEEEEeCChhHHHHHHHHhhcc-CC-ceeEEEccccCCcccC
Q 033605 37 LYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADL-EL-DIDFVQCDIRNLEWRG 112 (115)
Q Consensus 37 ~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~-~~-~v~~~~~d~~~~~~~~ 112 (115)
...++......++.+|||+|||+|.++..+++. + ..+++++|+++.+++.++++.... +. +++++++|+.+.++++
T Consensus 85 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~ 164 (258)
T 2pwy_A 85 ASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEE 164 (258)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCT
T ss_pred HHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCC
Confidence 345555556668889999999999999999975 3 469999999999999999998766 54 8999999998876654
No 144
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.43 E-value=9.7e-13 Score=87.66 Aligned_cols=86 Identities=27% Similarity=0.343 Sum_probs=67.7
Q ss_pred chhhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCC-------------------------------------
Q 033605 29 GPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGA------------------------------------- 71 (115)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~------------------------------------- 71 (115)
.....+.+...++......++.+|||++||+|.++++++....
T Consensus 182 ~Apl~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~ 261 (393)
T 3k0b_A 182 SAPIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYD 261 (393)
T ss_dssp SCSCCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTT
T ss_pred CCCCcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhccc
Confidence 3344555555566665555778999999999999998885321
Q ss_pred --CeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCcccCCC
Q 033605 72 --DQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGKY 114 (115)
Q Consensus 72 --~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~f 114 (115)
.+|+|+|+++.|++.|+.++...+. +++++++|+.+++.++.|
T Consensus 262 ~~~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~f 308 (393)
T 3k0b_A 262 QPLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEY 308 (393)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCS
T ss_pred CCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCC
Confidence 3699999999999999999998887 599999999998876543
No 145
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.43 E-value=2.4e-12 Score=85.23 Aligned_cols=63 Identities=24% Similarity=0.345 Sum_probs=55.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHhcCC-CeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccC-Ccc
Q 033605 47 VSNKVVADFGCGCGTLGAAATLLGA-DQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRN-LEW 110 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~-~~~ 110 (115)
.++.+|||+| |+|.++..++..+. .+|+++|+++.+++.|+++....+. +++++++|+.+ +|.
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~ 236 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPD 236 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCT
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchh
Confidence 3678999999 99999999987654 7999999999999999999988777 89999999988 653
No 146
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.43 E-value=6.7e-13 Score=85.21 Aligned_cols=47 Identities=28% Similarity=0.502 Sum_probs=40.2
Q ss_pred CCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhcc
Q 033605 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADL 94 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~ 94 (115)
++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.|+++....
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~ 93 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHY 93 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC---
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh
Confidence 6789999999999999999964 5679999999999999999986543
No 147
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.43 E-value=1.3e-12 Score=81.08 Aligned_cols=72 Identities=19% Similarity=0.226 Sum_probs=57.5
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccCC
Q 033605 35 RMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGK 113 (115)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~ 113 (115)
.+...+.... .++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++.. ++.++++|+.++++++.
T Consensus 29 ~~~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~~----~~~~~~~d~~~~~~~~~ 100 (239)
T 3bxo_A 29 DIADLVRSRT--PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRLP----DATLHQGDMRDFRLGRK 100 (239)
T ss_dssp HHHHHHHHHC--TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHCT----TCEEEECCTTTCCCSSC
T ss_pred HHHHHHHHhc--CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhCC----CCEEEECCHHHcccCCC
Confidence 3444444432 4678999999999999999997655 99999999999999998753 68999999998877444
No 148
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.43 E-value=9e-13 Score=83.39 Aligned_cols=67 Identities=19% Similarity=0.251 Sum_probs=57.5
Q ss_pred HhcCCCCCCeEEEEcCCCChHHHHHHhcC-CCeEEEEeCChhHHHHHHHHhhc---cCC--ceeEEEccccCC
Q 033605 42 NSFGDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAAD---LEL--DIDFVQCDIRNL 108 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~G~G~~~~~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~---~~~--~v~~~~~d~~~~ 108 (115)
......++.+|||+|||+|.+++.+++.. ..+|+|+|+++.+++.|++++.. .+. +++++++|+.++
T Consensus 30 ~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~ 102 (260)
T 2ozv_A 30 SLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLR 102 (260)
T ss_dssp HTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCC
T ss_pred HHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHH
Confidence 34444567899999999999999999653 56999999999999999999988 766 599999999887
No 149
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.42 E-value=4.4e-13 Score=82.76 Aligned_cols=60 Identities=15% Similarity=0.310 Sum_probs=53.5
Q ss_pred CCCeEEEEcCCCChHHHHHHhc--CCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccC
Q 033605 48 SNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRN 107 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~ 107 (115)
++.+|||+|||+|..+..+++. ...+|+++|+++.+++.|++++...+. +++++++|+.+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 121 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQD 121 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHH
Confidence 6789999999999999999973 256999999999999999999988776 69999999854
No 150
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.42 E-value=9.2e-13 Score=87.56 Aligned_cols=83 Identities=24% Similarity=0.323 Sum_probs=66.6
Q ss_pred hHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCC---------------------------------------C
Q 033605 32 IASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGA---------------------------------------D 72 (115)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~---------------------------------------~ 72 (115)
..+.+...++......++.+|||+|||+|.++++++.... .
T Consensus 179 l~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 258 (385)
T 3ldu_A 179 IRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKF 258 (385)
T ss_dssp CCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCC
T ss_pred CcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCc
Confidence 3445555566665556778999999999999999875321 4
Q ss_pred eEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCcccCCC
Q 033605 73 QVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGKY 114 (115)
Q Consensus 73 ~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~f 114 (115)
+|+|+|+++.+++.|+.++...+. ++++.++|+.+++.++.|
T Consensus 259 ~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~ 302 (385)
T 3ldu_A 259 KIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEF 302 (385)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBS
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCC
Confidence 799999999999999999998887 699999999998766543
No 151
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.42 E-value=6.4e-13 Score=84.97 Aligned_cols=70 Identities=16% Similarity=0.133 Sum_probs=55.4
Q ss_pred HHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC-----ceeEEEccccCCc
Q 033605 39 TAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-----DIDFVQCDIRNLE 109 (115)
Q Consensus 39 ~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~v~~~~~d~~~~~ 109 (115)
.+...+...++.+|||+|||+|..+..++..+. +|+|+|+|+.|++.++++...... ++.+..+|+.+++
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~ 122 (293)
T 3thr_A 48 WLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLD 122 (293)
T ss_dssp HHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHH
T ss_pred HHHHHhcccCCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCc
Confidence 333333334678999999999999999998755 999999999999999987643221 6888999988876
No 152
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.42 E-value=1.1e-12 Score=81.79 Aligned_cols=66 Identities=11% Similarity=0.064 Sum_probs=55.3
Q ss_pred HhcCCCCCCeEEEEcCCCChHHHHHHhc--CCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 42 NSFGDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~G~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+.+...++.+|||+|||+|.++..+++. +..+|+|+|+++.|++.+++++...+ |+..+.+|....
T Consensus 71 ~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~-ni~~V~~d~~~p 138 (233)
T 4df3_A 71 IELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRR-NIFPILGDARFP 138 (233)
T ss_dssp SCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCT-TEEEEESCTTCG
T ss_pred hhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhc-CeeEEEEeccCc
Confidence 3446678999999999999999999964 34699999999999999999887655 888888887653
No 153
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.42 E-value=1.4e-12 Score=86.42 Aligned_cols=69 Identities=14% Similarity=0.199 Sum_probs=58.4
Q ss_pred HHHHhcCCCCCCeEEEEcCCCChHHHHHHhcC-CCeEEEEeCChhHHHHHHHHhhccCC----ceeEEEccccC
Q 033605 39 TAENSFGDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL----DIDFVQCDIRN 107 (115)
Q Consensus 39 ~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~----~v~~~~~d~~~ 107 (115)
.+++.+...++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.++++...++. +++++.+|+.+
T Consensus 213 ~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~ 286 (375)
T 4dcm_A 213 FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS 286 (375)
T ss_dssp HHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT
T ss_pred HHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc
Confidence 34555565566899999999999999999753 57999999999999999999988764 58889999887
No 154
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.41 E-value=1.6e-12 Score=79.56 Aligned_cols=58 Identities=21% Similarity=0.236 Sum_probs=50.3
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccC-CceeEEEccccCC
Q 033605 46 DVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLE-LDIDFVQCDIRNL 108 (115)
Q Consensus 46 ~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~v~~~~~d~~~~ 108 (115)
..++.+|||+|||+|.++..+++.+ .+++|+|+|+.+++.+++ .+ .+++++++|+.++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~~~~ 102 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLA-DRVTALDGSAEMIAEAGR----HGLDNVEFRQQDLFDW 102 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHGG----GCCTTEEEEECCTTSC
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHh----cCCCCeEEEecccccC
Confidence 3466799999999999999999774 499999999999999988 33 2899999999887
No 155
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.41 E-value=2.3e-12 Score=81.93 Aligned_cols=77 Identities=21% Similarity=0.161 Sum_probs=63.1
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc--CCCeEEEEeCChhHHHHHHHHhhcc-C--C-ceeEEEccccCCc
Q 033605 36 MLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADL-E--L-DIDFVQCDIRNLE 109 (115)
Q Consensus 36 ~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~-~--~-~v~~~~~d~~~~~ 109 (115)
....++......++.+|||+|||+|.++..+++. +..+++++|+++.+++.++++.... + . +++++++|+.+.+
T Consensus 87 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~ 166 (280)
T 1i9g_A 87 DAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE 166 (280)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC
T ss_pred HHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC
Confidence 3445555556667889999999999999999964 3569999999999999999998776 4 2 8999999998887
Q ss_pred ccC
Q 033605 110 WRG 112 (115)
Q Consensus 110 ~~~ 112 (115)
+++
T Consensus 167 ~~~ 169 (280)
T 1i9g_A 167 LPD 169 (280)
T ss_dssp CCT
T ss_pred CCC
Confidence 643
No 156
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.41 E-value=1.5e-12 Score=82.89 Aligned_cols=69 Identities=17% Similarity=0.331 Sum_probs=56.4
Q ss_pred HHHHhcCCCCCCeEEEEcCCCChHHHHHHhc--CCCeEEEEeCChhHHHHHHHHhhcc-CC-ceeEEEccccC
Q 033605 39 TAENSFGDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADL-EL-DIDFVQCDIRN 107 (115)
Q Consensus 39 ~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~-~~-~v~~~~~d~~~ 107 (115)
.+...+...++.+|||+|||+|..+..+++. +..+|+++|+++.+++.++++.... +. +++++++|+.+
T Consensus 101 ~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~ 173 (275)
T 1yb2_A 101 YIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD 173 (275)
T ss_dssp -----CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT
T ss_pred HHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc
Confidence 4455555667889999999999999999965 3569999999999999999998877 65 89999999987
No 157
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.41 E-value=9.1e-13 Score=82.30 Aligned_cols=62 Identities=24% Similarity=0.333 Sum_probs=53.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCccc
Q 033605 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR 111 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~ 111 (115)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++... .+++++++|+.+++++
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~~--~~~~~~~~d~~~~~~~ 116 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENTA--ANISYRLLDGLVPEQA 116 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSCC--TTEEEEECCTTCHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCcc--cCceEEECcccccccc
Confidence 4677999999999999999998756 999999999999999998732 2799999999886643
No 158
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.41 E-value=2.6e-12 Score=86.34 Aligned_cols=73 Identities=18% Similarity=0.226 Sum_probs=59.1
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHh-cCCCeEEEEeCChhHHHHH-------HHHhhccC--C-ceeEEE
Q 033605 34 SRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATL-LGADQVIAIDIDSDSLELA-------SENAADLE--L-DIDFVQ 102 (115)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~-~~~~~v~~vD~s~~~~~~a-------~~~~~~~~--~-~v~~~~ 102 (115)
...+..+++.+...++.+|||+|||+|.++..+++ .+..+|+|+|+++.+++.| ++++...+ . ++++++
T Consensus 228 p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~ 307 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSL 307 (433)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEE
Confidence 44555566666666888999999999999999997 4556899999999999988 88887766 3 899998
Q ss_pred cccc
Q 033605 103 CDIR 106 (115)
Q Consensus 103 ~d~~ 106 (115)
+|..
T Consensus 308 gD~~ 311 (433)
T 1u2z_A 308 KKSF 311 (433)
T ss_dssp SSCS
T ss_pred cCcc
Confidence 7643
No 159
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.41 E-value=1.5e-12 Score=86.56 Aligned_cols=61 Identities=20% Similarity=0.215 Sum_probs=55.0
Q ss_pred CCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC---ceeEEEccccC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL---DIDFVQCDIRN 107 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~v~~~~~d~~~ 107 (115)
.++.+|||+|||+|.+++.++..+..+|+|+|+|+.+++.|++++..++. +++++++|+.+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~ 274 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFD 274 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHH
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHH
Confidence 36789999999999999999987667999999999999999999988875 69999999865
No 160
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.41 E-value=1.9e-12 Score=80.05 Aligned_cols=63 Identities=16% Similarity=0.151 Sum_probs=53.9
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhc-C-CCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 45 GDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 45 ~~~~~~~vLDlG~G~G~~~~~~~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
...++.+|||+|||+|.++..+++. + ..+|+|+|+|+.+++.++++.... .+++++++|+.+.
T Consensus 70 ~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-~~v~~~~~d~~~~ 134 (227)
T 1g8a_A 70 PIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-RNIVPILGDATKP 134 (227)
T ss_dssp CCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-TTEEEEECCTTCG
T ss_pred CCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-CCCEEEEccCCCc
Confidence 3457789999999999999999964 3 369999999999999999988765 4899999999873
No 161
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.40 E-value=1.3e-12 Score=79.91 Aligned_cols=71 Identities=18% Similarity=0.147 Sum_probs=55.9
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccCC
Q 033605 35 RMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGK 113 (115)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~ 113 (115)
..+..++..+ .++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++. ++.++++|+.+++..+.
T Consensus 32 ~~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-----~~~~~~~d~~~~~~~~~ 102 (211)
T 3e23_A 32 ATLTKFLGEL--PAGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRL-----GRPVRTMLFHQLDAIDA 102 (211)
T ss_dssp HHHHHHHTTS--CTTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH-----TSCCEECCGGGCCCCSC
T ss_pred HHHHHHHHhc--CCCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhc-----CCceEEeeeccCCCCCc
Confidence 3444444432 3677999999999999999998744 9999999999999999987 46788899888874333
No 162
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.40 E-value=2e-12 Score=80.65 Aligned_cols=66 Identities=20% Similarity=0.211 Sum_probs=59.3
Q ss_pred CCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccCCC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGKY 114 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~f 114 (115)
..+.+|||+|||+|-++..+. +...++|+|+++.+++.++++....+.+..+..+|....+++..|
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~ 169 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAG 169 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBC
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCc
Confidence 467899999999999999887 667999999999999999999888888899999999988887654
No 163
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.40 E-value=2.3e-12 Score=85.63 Aligned_cols=83 Identities=22% Similarity=0.293 Sum_probs=65.8
Q ss_pred hHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCC---------------------------------------C
Q 033605 32 IASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGA---------------------------------------D 72 (115)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~---------------------------------------~ 72 (115)
..+.+...++......++..+||++||+|.++++++.... .
T Consensus 178 l~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 257 (384)
T 3ldg_A 178 IKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQL 257 (384)
T ss_dssp CCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCC
T ss_pred CcHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCc
Confidence 3445555555555555778999999999999998885311 3
Q ss_pred eEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCcccCCC
Q 033605 73 QVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGKY 114 (115)
Q Consensus 73 ~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~f 114 (115)
+++|+|+++.|++.|++|+...+. +++++++|+.+++.++.|
T Consensus 258 ~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~f 301 (384)
T 3ldg_A 258 DISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKIN 301 (384)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCS
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCc
Confidence 699999999999999999998887 599999999998876543
No 164
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.38 E-value=1.3e-12 Score=85.33 Aligned_cols=60 Identities=22% Similarity=0.199 Sum_probs=53.8
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC---ceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL---DIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~v~~~~~d~~~~ 108 (115)
++.+|||+|||+|.+++.++..+. +|+++|+|+.+++.+++++..++. +++++++|+.++
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~ 215 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKF 215 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHH
T ss_pred CCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHH
Confidence 567999999999999999998766 999999999999999999987776 399999998764
No 165
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.38 E-value=2.7e-12 Score=85.55 Aligned_cols=62 Identities=29% Similarity=0.415 Sum_probs=56.0
Q ss_pred CCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC---ceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL---DIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~v~~~~~d~~~~ 108 (115)
.++.+|||+|||+|.+++.++..+..+|+|+|+|+.+++.|++++..++. +++++++|+.++
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~ 283 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKL 283 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHH
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHH
Confidence 36789999999999999999987667999999999999999999988876 799999998764
No 166
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.38 E-value=5.6e-12 Score=82.00 Aligned_cols=76 Identities=16% Similarity=0.204 Sum_probs=62.4
Q ss_pred HHHHHHhcCC--CCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCccc
Q 033605 37 LYTAENSFGD--VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR 111 (115)
Q Consensus 37 ~~~~~~~~~~--~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~ 111 (115)
...++..++. .++.+|||+|||+|..+..+++. +..+++++|++ .+++.++++....+. +++++.+|+.+.+++
T Consensus 152 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 230 (335)
T 2r3s_A 152 AQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYG 230 (335)
T ss_dssp HHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCC
T ss_pred HHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCC
Confidence 3455555555 57789999999999999999864 45699999999 999999999887665 699999999887776
Q ss_pred CC
Q 033605 112 GK 113 (115)
Q Consensus 112 ~~ 113 (115)
+.
T Consensus 231 ~~ 232 (335)
T 2r3s_A 231 ND 232 (335)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 167
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.38 E-value=8e-12 Score=78.04 Aligned_cols=70 Identities=23% Similarity=0.347 Sum_probs=59.4
Q ss_pred HHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCc
Q 033605 39 TAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLE 109 (115)
Q Consensus 39 ~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~ 109 (115)
.+.......++.+|||+|||+|.++..+++. ..+++++|+++.+++.++++....+. +++++.+|+.+..
T Consensus 82 ~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 153 (248)
T 2yvl_A 82 YIALKLNLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE 153 (248)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC
T ss_pred HHHHhcCCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc
Confidence 4445555567889999999999999999977 66999999999999999999877664 7999999988754
No 168
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.37 E-value=1.3e-12 Score=82.09 Aligned_cols=60 Identities=13% Similarity=0.119 Sum_probs=53.8
Q ss_pred CCCeEEEEcCCCChHHHHHHhc-C-CCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccC
Q 033605 48 SNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRN 107 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~ 107 (115)
++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.|++++...+. +++++++|+.+
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 126 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQ 126 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 6789999999999999999964 3 56999999999999999999988776 69999999865
No 169
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.37 E-value=1.7e-12 Score=86.20 Aligned_cols=66 Identities=27% Similarity=0.377 Sum_probs=55.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHhc--CCCeEEEEeCChhHHHHHHHHhhcc-----C----CceeEEEccccCC------c
Q 033605 47 VSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADL-----E----LDIDFVQCDIRNL------E 109 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~-----~----~~v~~~~~d~~~~------~ 109 (115)
.++.+|||+|||+|..+..+++. +..+|+|+|+|+.+++.++++.... + .+++++++|++++ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 46789999999999999999864 3569999999999999999987643 2 3899999999987 6
Q ss_pred ccC
Q 033605 110 WRG 112 (115)
Q Consensus 110 ~~~ 112 (115)
+++
T Consensus 162 ~~~ 164 (383)
T 4fsd_A 162 VPD 164 (383)
T ss_dssp CCT
T ss_pred CCC
Confidence 664
No 170
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.37 E-value=3.6e-12 Score=79.46 Aligned_cols=63 Identities=13% Similarity=-0.007 Sum_probs=49.7
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhc--CCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 45 GDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 45 ~~~~~~~vLDlG~G~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
...++.+|||+|||+|..+..+++. +..+|+|+|+++.|+..+.+..... .|+.++++|+...
T Consensus 73 ~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r-~nv~~i~~Da~~~ 137 (232)
T 3id6_C 73 PIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR-PNIFPLLADARFP 137 (232)
T ss_dssp SCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-TTEEEEECCTTCG
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-CCeEEEEcccccc
Confidence 3667899999999999999999864 3469999999999876554444332 3899999998764
No 171
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.37 E-value=3.8e-12 Score=81.32 Aligned_cols=74 Identities=27% Similarity=0.280 Sum_probs=54.6
Q ss_pred HHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeC-ChhHHHHHHHHh-----hccCC------ceeE
Q 033605 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDI-DSDSLELASENA-----ADLEL------DIDF 100 (115)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~-s~~~~~~a~~~~-----~~~~~------~v~~ 100 (115)
+..+.+.+.......++.+|||+|||+|.+++.+++.+..+|+|+|+ ++.+++.++++. ...+. ++++
T Consensus 64 ~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~ 143 (281)
T 3bzb_A 64 ARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKV 143 (281)
T ss_dssp HHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEE
T ss_pred HHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEE
Confidence 44556666555444577899999999999999998876669999999 899999999998 43332 4777
Q ss_pred EEcccc
Q 033605 101 VQCDIR 106 (115)
Q Consensus 101 ~~~d~~ 106 (115)
+..|..
T Consensus 144 ~~~~~~ 149 (281)
T 3bzb_A 144 VPYRWG 149 (281)
T ss_dssp EECCTT
T ss_pred EEecCC
Confidence 765543
No 172
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.37 E-value=1.7e-12 Score=80.08 Aligned_cols=73 Identities=10% Similarity=0.095 Sum_probs=58.8
Q ss_pred hHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc-C-CCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccC
Q 033605 32 IASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRN 107 (115)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~ 107 (115)
....++..+... .++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.+++++...+. +++++++|+.+
T Consensus 45 ~~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 121 (223)
T 3duw_A 45 TQGKFLQLLVQI---QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALD 121 (223)
T ss_dssp HHHHHHHHHHHH---HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred HHHHHHHHHHHh---hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 334444444333 36789999999999999999964 3 46999999999999999999988776 59999999865
No 173
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.37 E-value=7e-12 Score=77.37 Aligned_cols=61 Identities=26% Similarity=0.254 Sum_probs=53.6
Q ss_pred CCCeEEEEcCCCChHHHHHHhc-C-CCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~ 108 (115)
++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.+++++...+. +++++++|+.+.
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 128 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDT 128 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHH
Confidence 6779999999999999999964 3 56999999999999999999988776 599999998543
No 174
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.37 E-value=7.8e-12 Score=77.29 Aligned_cols=64 Identities=17% Similarity=0.256 Sum_probs=54.4
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhcC------CCeEEEEeCChhHHHHHHHHhhccC-----C-ceeEEEccccCCc
Q 033605 46 DVSNKVVADFGCGCGTLGAAATLLG------ADQVIAIDIDSDSLELASENAADLE-----L-DIDFVQCDIRNLE 109 (115)
Q Consensus 46 ~~~~~~vLDlG~G~G~~~~~~~~~~------~~~v~~vD~s~~~~~~a~~~~~~~~-----~-~v~~~~~d~~~~~ 109 (115)
..++.+|||+|||+|.++..+++.. ..+|+++|+++.+++.++++....+ . +++++++|+.+..
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 153 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVN 153 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcc
Confidence 3467899999999999999998753 2599999999999999999988765 3 8999999987743
No 175
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.37 E-value=2.6e-12 Score=78.65 Aligned_cols=78 Identities=22% Similarity=0.205 Sum_probs=60.7
Q ss_pred CchhhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc-C-CCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEc
Q 033605 28 TGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQC 103 (115)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~ 103 (115)
........++..+... .++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.+++++...+. +++++++
T Consensus 39 ~~~~~~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 115 (210)
T 3c3p_A 39 IVDRQTGRLLYLLARI---KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVG 115 (210)
T ss_dssp CCCHHHHHHHHHHHHH---HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEES
T ss_pred CcCHHHHHHHHHHHHh---hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEe
Confidence 3344445555554433 25679999999999999999964 3 46999999999999999999887665 6999999
Q ss_pred cccCC
Q 033605 104 DIRNL 108 (115)
Q Consensus 104 d~~~~ 108 (115)
|+.+.
T Consensus 116 d~~~~ 120 (210)
T 3c3p_A 116 DPLGI 120 (210)
T ss_dssp CHHHH
T ss_pred cHHHH
Confidence 98653
No 176
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.37 E-value=1.7e-12 Score=82.66 Aligned_cols=66 Identities=12% Similarity=0.221 Sum_probs=57.4
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhc--CCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCCcc
Q 033605 45 GDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW 110 (115)
Q Consensus 45 ~~~~~~~vLDlG~G~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~ 110 (115)
...++.+|||+|||+|..+..+++. +..+|+|+|+++.+++.++++....+. +++++++|+.+++.
T Consensus 80 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~ 148 (274)
T 3ajd_A 80 NPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKD 148 (274)
T ss_dssp CCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHH
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcch
Confidence 4457789999999999999999863 336999999999999999999998887 89999999877653
No 177
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.37 E-value=5e-12 Score=82.54 Aligned_cols=71 Identities=21% Similarity=0.330 Sum_probs=58.1
Q ss_pred HHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc-CC-CeEEEEeCChhHHHHHHHHhhccC------------CceeEEEc
Q 033605 38 YTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GA-DQVIAIDIDSDSLELASENAADLE------------LDIDFVQC 103 (115)
Q Consensus 38 ~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~-~~-~~v~~vD~s~~~~~~a~~~~~~~~------------~~v~~~~~ 103 (115)
..++..+...++.+|||+|||+|.++..+++. +. .+|+++|+++.+++.|+++....+ .+++++++
T Consensus 95 ~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~ 174 (336)
T 2b25_A 95 NMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK 174 (336)
T ss_dssp HHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES
T ss_pred HHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEEC
Confidence 33444445668889999999999999999975 43 699999999999999999987532 37999999
Q ss_pred cccCC
Q 033605 104 DIRNL 108 (115)
Q Consensus 104 d~~~~ 108 (115)
|+.+.
T Consensus 175 d~~~~ 179 (336)
T 2b25_A 175 DISGA 179 (336)
T ss_dssp CTTCC
T ss_pred ChHHc
Confidence 99876
No 178
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.36 E-value=5.8e-12 Score=82.38 Aligned_cols=60 Identities=32% Similarity=0.443 Sum_probs=54.6
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCc
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLE 109 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~ 109 (115)
++.+|||+|||+|.+++. ++ +..+|+|+|+|+.+++.+++++..++. +++++++|+.++.
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~ 256 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD 256 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC
T ss_pred CCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc
Confidence 678999999999999999 87 577999999999999999999998876 7999999998764
No 179
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.36 E-value=1.1e-11 Score=81.58 Aligned_cols=76 Identities=18% Similarity=0.193 Sum_probs=62.9
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCcccC
Q 033605 36 MLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRG 112 (115)
Q Consensus 36 ~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~ 112 (115)
....+++.+...++.+|||+|||+|.++..+++. +..+++++|+ +.+++.++++....+. +++++.+|+.+.++++
T Consensus 178 ~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 256 (359)
T 1x19_A 178 AIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPE 256 (359)
T ss_dssp HHHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCC
T ss_pred hHHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCC
Confidence 3455666666667789999999999999999964 4569999999 9999999999887665 5999999998877653
No 180
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.36 E-value=2.5e-12 Score=84.25 Aligned_cols=87 Identities=16% Similarity=0.089 Sum_probs=64.5
Q ss_pred ccccCCCchhhHHHHHHHHHHhc-CCCCCCeEEEEcCCCChHHHHHHhcC-C-----CeEEEEeCChhHHHHHHHHhhcc
Q 033605 22 ELEQYPTGPHIASRMLYTAENSF-GDVSNKVVADFGCGCGTLGAAATLLG-A-----DQVIAIDIDSDSLELASENAADL 94 (115)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~vLDlG~G~G~~~~~~~~~~-~-----~~v~~vD~s~~~~~~a~~~~~~~ 94 (115)
....+.++......+... +..+ ...++.+|||+|||+|.++..+++.. . .+++|+|+++.++..|+.+....
T Consensus 104 ~~g~~~TP~~i~~~~~~l-l~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~ 182 (344)
T 2f8l_A 104 QVNHQMTPDSIGFIVAYL-LEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQ 182 (344)
T ss_dssp CGGGCCCCHHHHHHHHHH-HHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHH
T ss_pred ccCcCCChHHHHHHHHHH-HHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhC
Confidence 345566777555443333 3322 33356799999999999999988542 1 58999999999999999998877
Q ss_pred CCceeEEEccccCCc
Q 033605 95 ELDIDFVQCDIRNLE 109 (115)
Q Consensus 95 ~~~v~~~~~d~~~~~ 109 (115)
+.++.++++|+....
T Consensus 183 g~~~~i~~~D~l~~~ 197 (344)
T 2f8l_A 183 RQKMTLLHQDGLANL 197 (344)
T ss_dssp TCCCEEEESCTTSCC
T ss_pred CCCceEEECCCCCcc
Confidence 768899999987643
No 181
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.36 E-value=3e-12 Score=79.59 Aligned_cols=65 Identities=18% Similarity=0.046 Sum_probs=52.7
Q ss_pred hcCCCCCCeEEEEcCCCChHHHHHHhc--CCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 43 SFGDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 43 ~~~~~~~~~vLDlG~G~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
.+...++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.+.++.... .+++++++|+.+.
T Consensus 72 ~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~ 138 (233)
T 2ipx_A 72 QIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHP 138 (233)
T ss_dssp CCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCG
T ss_pred eecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCCh
Confidence 334556789999999999999999965 3469999999999887777766654 3799999999873
No 182
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.36 E-value=1.1e-11 Score=78.25 Aligned_cols=59 Identities=24% Similarity=0.362 Sum_probs=51.2
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccC
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG 112 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 112 (115)
++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++... .++++|+.++++++
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~-----~~~~~d~~~~~~~~ 112 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGVK-----NVVEAKAEDLPFPS 112 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTCS-----CEEECCTTSCCSCT
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcCC-----CEEECcHHHCCCCC
Confidence 678999999999999999997744 999999999999999988652 28889999888764
No 183
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.35 E-value=2.3e-12 Score=83.21 Aligned_cols=58 Identities=21% Similarity=0.237 Sum_probs=46.8
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC-------ceeEEEccc
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-------DIDFVQCDI 105 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-------~v~~~~~d~ 105 (115)
++.+|||+|||+|..+..++..+..+|+|+|+|+.|++.|+++....+. ++++.+.|+
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~ 112 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETI 112 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCT
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhc
Confidence 4679999999999877666655556999999999999999998766543 256777777
No 184
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.35 E-value=8.5e-12 Score=77.06 Aligned_cols=65 Identities=23% Similarity=0.206 Sum_probs=54.1
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhc-CC-CeEEEEeCChhHHHHHHHHhhccC-----C-ceeEEEccccCCcc
Q 033605 46 DVSNKVVADFGCGCGTLGAAATLL-GA-DQVIAIDIDSDSLELASENAADLE-----L-DIDFVQCDIRNLEW 110 (115)
Q Consensus 46 ~~~~~~vLDlG~G~G~~~~~~~~~-~~-~~v~~vD~s~~~~~~a~~~~~~~~-----~-~v~~~~~d~~~~~~ 110 (115)
..++.+|||+|||+|..+..+++. +. .+|+++|+++.+++.++++....+ . +++++++|+...+.
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 147 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA 147 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcc
Confidence 446789999999999999999864 33 599999999999999999887654 2 79999999876543
No 185
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.35 E-value=2.7e-12 Score=84.09 Aligned_cols=73 Identities=15% Similarity=0.190 Sum_probs=59.2
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcC-CCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCc
Q 033605 37 LYTAENSFGDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE 109 (115)
Q Consensus 37 ~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 109 (115)
.+.+++.+....+.+|||+|||+|.++..+++.+ ..+|+++|+|+.+++.++++....+.++.++.+|+.+.+
T Consensus 185 ~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~ 258 (343)
T 2pjd_A 185 SQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV 258 (343)
T ss_dssp HHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC
T ss_pred HHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc
Confidence 3444555544456799999999999999999764 359999999999999999999887777788899987654
No 186
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.35 E-value=9.3e-12 Score=74.81 Aligned_cols=61 Identities=21% Similarity=0.380 Sum_probs=53.2
Q ss_pred CCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG 112 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 112 (115)
.++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.++++.. +++++++|+.++++++
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~----~~~~~~~d~~~~~~~~ 105 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQG-HDVLGTDLDPILIDYAKQDFP----EARWVVGDLSVDQISE 105 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTT-CEEEEEESCHHHHHHHHHHCT----TSEEEECCTTTSCCCC
T ss_pred cCCCeEEEECCCCCHHHHHHHHCC-CcEEEEcCCHHHHHHHHHhCC----CCcEEEcccccCCCCC
Confidence 377899999999999999999774 499999999999999998864 5889999999887653
No 187
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.35 E-value=4.7e-12 Score=82.17 Aligned_cols=68 Identities=16% Similarity=0.230 Sum_probs=58.8
Q ss_pred hcCCCCCCeEEEEcCCCChHHHHHHhc--CCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCCcc
Q 033605 43 SFGDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW 110 (115)
Q Consensus 43 ~~~~~~~~~vLDlG~G~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~ 110 (115)
.+...++.+|||+|||+|..+..+++. +..+|+|+|+++.+++.++++....+. +++++++|+.+++.
T Consensus 113 ~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~ 183 (315)
T 1ixk_A 113 ALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE 183 (315)
T ss_dssp HHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG
T ss_pred HhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc
Confidence 334557789999999999999999964 346999999999999999999988887 89999999988764
No 188
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.34 E-value=1.3e-11 Score=78.61 Aligned_cols=71 Identities=20% Similarity=0.213 Sum_probs=59.8
Q ss_pred HHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc-C-CCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCC
Q 033605 38 YTAENSFGDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNL 108 (115)
Q Consensus 38 ~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~ 108 (115)
..++......++.+|||+|||+|.++..+++. + ..+|+++|+++.+++.++++....+. +++++++|+.+.
T Consensus 102 ~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 176 (277)
T 1o54_A 102 SFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG 176 (277)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC
T ss_pred HHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc
Confidence 34455556667889999999999999999965 3 56999999999999999999887775 799999998775
No 189
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.34 E-value=1.8e-11 Score=75.95 Aligned_cols=61 Identities=18% Similarity=0.252 Sum_probs=54.0
Q ss_pred CCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~ 108 (115)
++.+|||+|||+|..+..+++. +..+|+++|+++.+++.|++++...+. +++++++|+.+.
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 117 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQL 117 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGS
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH
Confidence 6779999999999999999964 356999999999999999999887776 699999998764
No 190
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.33 E-value=8.8e-12 Score=78.35 Aligned_cols=74 Identities=19% Similarity=0.217 Sum_probs=59.4
Q ss_pred hHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc-C-CCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccC
Q 033605 32 IASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRN 107 (115)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~ 107 (115)
....++..+... .++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.|++++...+. +++++++|+.+
T Consensus 66 ~~~~ll~~l~~~---~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~ 142 (247)
T 1sui_A 66 DEGQFLSMLLKL---INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALP 142 (247)
T ss_dssp HHHHHHHHHHHH---TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred HHHHHHHHHHHh---hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHH
Confidence 344445444443 36679999999999999999964 3 46999999999999999999988776 79999999865
Q ss_pred C
Q 033605 108 L 108 (115)
Q Consensus 108 ~ 108 (115)
.
T Consensus 143 ~ 143 (247)
T 1sui_A 143 V 143 (247)
T ss_dssp H
T ss_pred H
Confidence 3
No 191
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.33 E-value=2.1e-11 Score=77.05 Aligned_cols=62 Identities=18% Similarity=0.287 Sum_probs=53.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG 112 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 112 (115)
.++.+|||+|||+|.++..+++. +..+++|+|+|+.+++.++++.. ++.++.+|++++++++
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~d~~~~~~~~ 146 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYP----QVTFCVASSHRLPFSD 146 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCT----TSEEEECCTTSCSBCT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCC----CcEEEEcchhhCCCCC
Confidence 46789999999999999999875 35699999999999999988753 6789999999888764
No 192
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.32 E-value=3e-12 Score=80.23 Aligned_cols=73 Identities=18% Similarity=0.114 Sum_probs=58.6
Q ss_pred HHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc-C-CCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCC
Q 033605 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNL 108 (115)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~ 108 (115)
...++..+... .++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.|++++...+. +++++++|+.+.
T Consensus 48 ~~~~l~~l~~~---~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~ 124 (242)
T 3r3h_A 48 QAQFMQMLIRL---TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDT 124 (242)
T ss_dssp HHHHHHHHHHH---HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHH
T ss_pred HHHHHHHHHhh---cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH
Confidence 33444444432 36779999999999999999963 2 56999999999999999999988776 799999998653
No 193
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.32 E-value=3.7e-12 Score=80.62 Aligned_cols=49 Identities=14% Similarity=0.142 Sum_probs=41.1
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhc
Q 033605 45 GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAAD 93 (115)
Q Consensus 45 ~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 93 (115)
...++.+|||+|||+|.++..++..+..+|+|+|+|+.|++.|++++..
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~ 100 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKK 100 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHT
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhc
Confidence 3446789999999999988877766666899999999999999987644
No 194
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.32 E-value=2.1e-11 Score=76.04 Aligned_cols=60 Identities=12% Similarity=0.087 Sum_probs=52.9
Q ss_pred CCCeEEEEcCCCChHHHHHHhc-C-CCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccC
Q 033605 48 SNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRN 107 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~ 107 (115)
++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.+++++...+. +++++++|+.+
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 123 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALE 123 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHH
Confidence 6789999999999999999965 3 46999999999999999999887776 49999999765
No 195
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.32 E-value=5.2e-12 Score=84.34 Aligned_cols=60 Identities=23% Similarity=0.212 Sum_probs=54.1
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhcc--CC-ceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADL--EL-DIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~-~v~~~~~d~~~~ 108 (115)
++.+|||+|||+|..+..+++.+ .+|+++|+|+.+++.+++++... +. +++++++|+.++
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g-~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~ 155 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKA-SQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEY 155 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGS
T ss_pred CCCEEEEeCCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHh
Confidence 47899999999999999998774 49999999999999999999877 66 899999999874
No 196
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.31 E-value=7.9e-12 Score=83.28 Aligned_cols=61 Identities=28% Similarity=0.294 Sum_probs=55.7
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~ 108 (115)
++.+|||+|||+|.++..++..+..+|+|+|+|+.+++.|++++..++. +++++++|+.++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~ 279 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEE 279 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHH
Confidence 6789999999999999999987667999999999999999999998887 799999998764
No 197
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.31 E-value=1.9e-11 Score=80.60 Aligned_cols=65 Identities=17% Similarity=0.197 Sum_probs=56.0
Q ss_pred CCCCeEEEEcCCCChHHHHHHh-cCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCC--cccC
Q 033605 47 VSNKVVADFGCGCGTLGAAATL-LGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNL--EWRG 112 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~--~~~~ 112 (115)
..+.+|||+|||+|..+..+++ .+..+++++|+ +.+++.++++....+. +++++.+|+.+. |+++
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~ 247 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPT 247 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCC
Confidence 3667999999999999999986 45669999999 9999999999887775 799999999886 4554
No 198
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.31 E-value=5.6e-12 Score=78.06 Aligned_cols=62 Identities=19% Similarity=0.234 Sum_probs=52.3
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhc-CC------CeEEEEeCChhHHHHHHHHhhccC-----C-ceeEEEccccC
Q 033605 46 DVSNKVVADFGCGCGTLGAAATLL-GA------DQVIAIDIDSDSLELASENAADLE-----L-DIDFVQCDIRN 107 (115)
Q Consensus 46 ~~~~~~vLDlG~G~G~~~~~~~~~-~~------~~v~~vD~s~~~~~~a~~~~~~~~-----~-~v~~~~~d~~~ 107 (115)
..++.+|||+|||+|..+..+++. +. .+|+++|+++.+++.++++....+ . +++++++|+.+
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 156 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK 156 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc
Confidence 346789999999999999999863 32 499999999999999999887654 2 79999999876
No 199
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.31 E-value=4.7e-11 Score=78.87 Aligned_cols=74 Identities=16% Similarity=0.070 Sum_probs=60.9
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCCChHHHHHHh-cCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCcccC
Q 033605 37 LYTAENSFGDVSNKVVADFGCGCGTLGAAATL-LGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRG 112 (115)
Q Consensus 37 ~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~ 112 (115)
...+...++..+..+|||+|||+|.++..+++ .+..+++++|+ +.+++.++++....+. +++++.+|+. .+++.
T Consensus 191 ~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~ 267 (369)
T 3gwz_A 191 AGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD 267 (369)
T ss_dssp HHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS
T ss_pred HHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC
Confidence 44556666666778999999999999999996 45569999999 9999999999887765 7999999997 45553
No 200
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.31 E-value=1.4e-12 Score=82.55 Aligned_cols=61 Identities=20% Similarity=0.164 Sum_probs=52.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCCh-------hHHHHHHHHhhccCC--ceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDS-------DSLELASENAADLEL--DIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~-------~~~~~a~~~~~~~~~--~v~~~~~d~~~~ 108 (115)
.++.+|||+|||+|..++.++..+ .+|+|+|+++ .+++.++++...++. +++++++|++++
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g-~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~ 151 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLG-LTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQ 151 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTT-CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHH
T ss_pred CCcCeEEEeeCccCHHHHHHHHhC-CEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHH
Confidence 356799999999999999999875 4999999999 999999988776655 499999998764
No 201
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.31 E-value=1e-11 Score=82.80 Aligned_cols=60 Identities=23% Similarity=0.256 Sum_probs=52.5
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
++.+|||+|||+|.+++.++..+. .|+++|+|+.+++.+++++..++....+.++|+.++
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga-~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~ 273 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGA-YALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPT 273 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHH
T ss_pred CCCeEEEcccchhHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHH
Confidence 478999999999999999998766 599999999999999999988877556778887654
No 202
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.30 E-value=7.2e-12 Score=77.01 Aligned_cols=56 Identities=23% Similarity=0.248 Sum_probs=48.2
Q ss_pred CCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
.++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++ .++.+.++|+.++
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~ 106 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAA-----GAGEVHLASYAQL 106 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHT-----CSSCEEECCHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHh-----cccccchhhHHhh
Confidence 4678999999999999999998744 999999999999999987 2567888887766
No 203
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.30 E-value=2.3e-11 Score=80.20 Aligned_cols=72 Identities=19% Similarity=0.191 Sum_probs=58.5
Q ss_pred HHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCccc
Q 033605 38 YTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR 111 (115)
Q Consensus 38 ~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~ 111 (115)
..++..+...++.+|||+|||+|.++..+++. +..+++++|+ +.+++.++++....+. +++++++|+.+ +++
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~ 246 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLP 246 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCS
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCC
Confidence 34445555557789999999999999999964 4569999999 9999999999887665 79999999875 444
No 204
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.30 E-value=9.8e-12 Score=79.49 Aligned_cols=46 Identities=13% Similarity=0.086 Sum_probs=37.3
Q ss_pred CCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhh
Q 033605 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAA 92 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~ 92 (115)
.++.+|||+|||+|.....++.....+|+|+|+|+.|++.|+++..
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~ 115 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQ 115 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHT
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHh
Confidence 3678999999999996554544445699999999999999988654
No 205
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.30 E-value=9.1e-12 Score=77.03 Aligned_cols=62 Identities=21% Similarity=0.197 Sum_probs=53.6
Q ss_pred CCCCeEEEEcCCCChHHHHHHhc-C-CCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~ 108 (115)
.++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.+++++...+. +++++++|+.+.
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~ 133 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALET 133 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHH
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHH
Confidence 36789999999999999999964 3 56999999999999999999887765 799999998543
No 206
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.30 E-value=2.7e-11 Score=75.61 Aligned_cols=73 Identities=19% Similarity=0.223 Sum_probs=58.9
Q ss_pred HHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc-C-CCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCC
Q 033605 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNL 108 (115)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~ 108 (115)
...++..+... .++.+|||+|||+|..+..+++. + ..+++++|+++.+++.|++++...+. +++++++|+.+.
T Consensus 58 ~~~~l~~l~~~---~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~ 134 (237)
T 3c3y_A 58 AGQLMSFVLKL---VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLA 134 (237)
T ss_dssp HHHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH
T ss_pred HHHHHHHHHHh---hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH
Confidence 34444444433 36779999999999999999964 3 46999999999999999999988776 699999998653
No 207
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.30 E-value=5e-12 Score=78.80 Aligned_cols=58 Identities=22% Similarity=0.406 Sum_probs=47.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC--cccC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL--EWRG 112 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~--~~~~ 112 (115)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++ +.++++|+.++ ++++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~-------~~~~~~d~~~~~~~~~~ 99 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEGK-------FNVVKSDAIEYLKSLPD 99 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHTT-------SEEECSCHHHHHHTSCT
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHhh-------cceeeccHHHHhhhcCC
Confidence 3568999999999999999987755 899999999999999876 56777887665 5443
No 208
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.29 E-value=2e-11 Score=79.95 Aligned_cols=73 Identities=16% Similarity=0.195 Sum_probs=60.0
Q ss_pred HHHHhcCCCC-CCeEEEEcCCCChHHHHHHh-cCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCc--ccC
Q 033605 39 TAENSFGDVS-NKVVADFGCGCGTLGAAATL-LGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLE--WRG 112 (115)
Q Consensus 39 ~~~~~~~~~~-~~~vLDlG~G~G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~--~~~ 112 (115)
.++..+...+ +.+|||+|||+|.++..+++ .+..+++++|+ +.+++.++++....+. +++++.+|+.+.+ +++
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 247 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGG 247 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTC
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCC
Confidence 4445555455 78999999999999999996 45579999999 8899999999887776 6999999998876 554
No 209
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.29 E-value=2.3e-12 Score=80.50 Aligned_cols=57 Identities=25% Similarity=0.176 Sum_probs=48.0
Q ss_pred CCCeEEEEcCCCChHHHHHHhc-----CCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAATLL-----GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~-----~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
++.+|||+|||+|..+..+++. +..+|+|+|+++.+++.|+. ...+++++++|+.+.
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~----~~~~v~~~~gD~~~~ 142 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS----DMENITLHQGDCSDL 142 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG----GCTTEEEEECCSSCS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc----cCCceEEEECcchhH
Confidence 5679999999999999999865 35699999999999988872 123799999999884
No 210
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.29 E-value=4.2e-12 Score=75.20 Aligned_cols=55 Identities=20% Similarity=0.254 Sum_probs=47.5
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEcc
Q 033605 45 GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCD 104 (115)
Q Consensus 45 ~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d 104 (115)
...++.+|||+|||+|.++..+++... +++|+|+++.+++.++++. .+++++++|
T Consensus 14 ~~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~----~~v~~~~~d 68 (170)
T 3i9f_A 14 FEGKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEKF----DSVITLSDP 68 (170)
T ss_dssp HSSCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHHC----TTSEEESSG
T ss_pred CcCCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHhC----CCcEEEeCC
Confidence 344778999999999999999997655 9999999999999999882 278888888
No 211
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.29 E-value=5e-12 Score=79.66 Aligned_cols=68 Identities=21% Similarity=0.211 Sum_probs=59.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccCCC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGKY 114 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~f 114 (115)
..+.+|||||||+|-++..++.. +...|+++|+++.+++.++.++..++.+..+...|...-+++..|
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~ 199 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPA 199 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCC
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCc
Confidence 35789999999999999998864 678999999999999999999999888889999998877776654
No 212
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.29 E-value=6.5e-12 Score=83.40 Aligned_cols=60 Identities=22% Similarity=0.238 Sum_probs=54.7
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~ 108 (115)
++.+|||+|||+|.++..++.. ..+|+|+|+|+.+++.|++++..++. +++++++|+.++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~ 269 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDL 269 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHH
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHH
Confidence 6779999999999999999977 66999999999999999999998887 799999998765
No 213
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.28 E-value=5.1e-12 Score=78.79 Aligned_cols=55 Identities=22% Similarity=0.290 Sum_probs=43.9
Q ss_pred HHHHHhcCC-CCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhh
Q 033605 38 YTAENSFGD-VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAA 92 (115)
Q Consensus 38 ~~~~~~~~~-~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~ 92 (115)
..++..+.. .++.+|||+|||+|.++..+++.+..+|+|+|+|+.|++.++++..
T Consensus 26 ~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~ 81 (232)
T 3opn_A 26 EKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDE 81 (232)
T ss_dssp HHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCT
T ss_pred HHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCc
Confidence 334444443 3567999999999999999998866799999999999999877544
No 214
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.28 E-value=9e-12 Score=78.37 Aligned_cols=66 Identities=17% Similarity=0.209 Sum_probs=54.1
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC----------------------------
Q 033605 45 GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL---------------------------- 96 (115)
Q Consensus 45 ~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---------------------------- 96 (115)
+..++.+|||+|||+|.++..++..+..+|+|+|+|+.+++.++++....+.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 3456789999999999999998876556999999999999999998765431
Q ss_pred --ce-eEEEccccCCcc
Q 033605 97 --DI-DFVQCDIRNLEW 110 (115)
Q Consensus 97 --~v-~~~~~d~~~~~~ 110 (115)
++ .++++|+.+.+.
T Consensus 133 ~~~v~~~~~~d~~~~~~ 149 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQP 149 (265)
T ss_dssp HHHEEEEEECCTTSSST
T ss_pred hhhheeEEEeeeccCCC
Confidence 27 899999988653
No 215
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.28 E-value=4.5e-11 Score=78.52 Aligned_cols=68 Identities=19% Similarity=0.255 Sum_probs=56.7
Q ss_pred HHHHhcCCCCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccC
Q 033605 39 TAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRN 107 (115)
Q Consensus 39 ~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~ 107 (115)
.+++.+...++.+|||+|||+|.++..+++. +..+++++|+ +.+++.++++....+. +++++.+|+.+
T Consensus 174 ~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 244 (360)
T 1tw3_A 174 APAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE 244 (360)
T ss_dssp HHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred HHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC
Confidence 3445555567789999999999999999864 4569999999 9999999999887665 79999999875
No 216
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.28 E-value=4.9e-11 Score=76.01 Aligned_cols=72 Identities=18% Similarity=0.191 Sum_probs=53.8
Q ss_pred HHHHHHHhcC-CCCCCeEEEEcCCC---ChHHHHHHh-cCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 36 MLYTAENSFG-DVSNKVVADFGCGC---GTLGAAATL-LGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 36 ~~~~~~~~~~-~~~~~~vLDlG~G~---G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
.+..++..+. .....+|||||||+ |.++..+.+ .+..+|+++|+|+.|++.++++....+ +++++++|+.+.
T Consensus 64 ~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~-~v~~~~~D~~~~ 140 (274)
T 2qe6_A 64 VLVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDP-NTAVFTADVRDP 140 (274)
T ss_dssp HHHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCT-TEEEEECCTTCH
T ss_pred HHHHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCC-CeEEEEeeCCCc
Confidence 3344444333 22447999999999 988766665 345699999999999999999885432 799999999763
No 217
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.27 E-value=2.5e-11 Score=86.03 Aligned_cols=60 Identities=23% Similarity=0.183 Sum_probs=54.7
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC---ceeEEEccccC
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL---DIDFVQCDIRN 107 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~v~~~~~d~~~ 107 (115)
++.+|||+|||+|.+++.++..+..+|+++|+|+.+++.+++++..++. +++++++|+.+
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~ 601 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLA 601 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHH
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHH
Confidence 6789999999999999999987777899999999999999999988775 59999999876
No 218
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.27 E-value=1.3e-11 Score=79.43 Aligned_cols=62 Identities=18% Similarity=0.207 Sum_probs=52.3
Q ss_pred CCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhcc------CCceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADL------ELDIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~------~~~v~~~~~d~~~~ 108 (115)
.++.+|||+|||+|..+..+++. +..+|+++|+++.+++.|++++... ..+++++.+|+.++
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~ 150 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNF 150 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC-
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHH
Confidence 36789999999999999999976 4579999999999999999987643 22899999998664
No 219
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.27 E-value=1.7e-11 Score=79.48 Aligned_cols=61 Identities=15% Similarity=0.138 Sum_probs=52.2
Q ss_pred CCCeEEEEcCCCChHHHHHHh-cCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAATL-LGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~ 108 (115)
++.+|||||||+|.++..+++ ++..+++++|+++.+++.|++++..... +++++.+|+.++
T Consensus 89 ~~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~ 151 (317)
T 3gjy_A 89 SKLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMV 151 (317)
T ss_dssp GGCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHH
T ss_pred CCCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHH
Confidence 345999999999999999997 5566999999999999999999865433 899999998654
No 220
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.27 E-value=4e-11 Score=77.63 Aligned_cols=66 Identities=15% Similarity=0.133 Sum_probs=58.0
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhc--CCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCCcc
Q 033605 45 GDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW 110 (115)
Q Consensus 45 ~~~~~~~vLDlG~G~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~ 110 (115)
...++.+|||+|||+|..+..++.. +..+|+++|+++.+++.+++++...+. +++++++|+.+++.
T Consensus 99 ~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~ 167 (309)
T 2b9e_A 99 DPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSP 167 (309)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCT
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCc
Confidence 4457889999999999999999963 446999999999999999999998887 89999999987653
No 221
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.26 E-value=2.8e-11 Score=78.79 Aligned_cols=74 Identities=20% Similarity=0.233 Sum_probs=58.3
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCcccCC
Q 033605 37 LYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGK 113 (115)
Q Consensus 37 ~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~ 113 (115)
...+...++... .+|||+|||+|..+..+++. +..+++++|+ +.+++.++++....+. +++++.+|+.+ +++..
T Consensus 157 ~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~ 233 (334)
T 2ip2_A 157 FHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVPSN 233 (334)
T ss_dssp HHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCCSS
T ss_pred HHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCCCC
Confidence 344555554445 89999999999999999864 4569999999 9999999998765543 79999999977 55543
No 222
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.25 E-value=2e-11 Score=75.99 Aligned_cols=72 Identities=19% Similarity=0.138 Sum_probs=57.1
Q ss_pred HHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc-C-CCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccC
Q 033605 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRN 107 (115)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~ 107 (115)
....+..+... .++.+|||+|||+|..+..+++. + ..+++++|+++.+++.|++++...+. +++++++|+.+
T Consensus 60 ~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~ 135 (232)
T 3cbg_A 60 QAQFLGLLISL---TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALA 135 (232)
T ss_dssp HHHHHHHHHHH---HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred HHHHHHHHHHh---cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 34444444432 25679999999999999999964 3 46999999999999999999887766 69999999754
No 223
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.24 E-value=2.8e-11 Score=82.47 Aligned_cols=62 Identities=11% Similarity=0.209 Sum_probs=55.9
Q ss_pred CCCeEEEEcCCCChHHHHHHhc--CCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCCc
Q 033605 48 SNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLE 109 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~ 109 (115)
++.+|||+|||+|..+..+++. +...|+++|+++.+++.+++++...+. +++++++|+.+++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~ 181 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFG 181 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhh
Confidence 7789999999999999999964 246999999999999999999998887 8999999998765
No 224
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.24 E-value=1.4e-11 Score=83.40 Aligned_cols=65 Identities=14% Similarity=0.114 Sum_probs=56.9
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhc--CCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCCc
Q 033605 45 GDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLE 109 (115)
Q Consensus 45 ~~~~~~~vLDlG~G~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~ 109 (115)
...++.+|||+|||+|..+..+++. +...|+++|+++.+++.+++++...+. ++.++++|+.+++
T Consensus 102 ~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~ 169 (456)
T 3m4x_A 102 AAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELV 169 (456)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHH
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhh
Confidence 4457889999999999999999863 346999999999999999999999888 8999999987664
No 225
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.24 E-value=4e-11 Score=78.06 Aligned_cols=65 Identities=18% Similarity=0.057 Sum_probs=54.3
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHh-cCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCccc
Q 033605 45 GDVSNKVVADFGCGCGTLGAAATL-LGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR 111 (115)
Q Consensus 45 ~~~~~~~vLDlG~G~G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~ 111 (115)
+..+..+|||+|||+|.++..+++ .+..+++++|+ +.+++.++++....+. +++++.+|+. .+++
T Consensus 166 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p 233 (332)
T 3i53_A 166 DWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLP 233 (332)
T ss_dssp CCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCC
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCC
Confidence 334567999999999999999986 45669999999 9999999999887765 7999999996 3444
No 226
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.24 E-value=5.7e-11 Score=80.42 Aligned_cols=67 Identities=13% Similarity=0.167 Sum_probs=58.3
Q ss_pred hcCCCCCCeEEEEcCCCChHHHHHHhc-CC-CeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCCc
Q 033605 43 SFGDVSNKVVADFGCGCGTLGAAATLL-GA-DQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLE 109 (115)
Q Consensus 43 ~~~~~~~~~vLDlG~G~G~~~~~~~~~-~~-~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~ 109 (115)
.+...++.+|||+|||+|..+..++.. +. .+|+++|+++.+++.++++....+. +++++++|+.+++
T Consensus 254 ~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~ 323 (450)
T 2yxl_A 254 VLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAP 323 (450)
T ss_dssp HHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCS
T ss_pred hcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcc
Confidence 334557789999999999999999964 33 6999999999999999999998887 8999999998876
No 227
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.24 E-value=1.5e-11 Score=83.31 Aligned_cols=65 Identities=17% Similarity=0.168 Sum_probs=56.3
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhc--CCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCc
Q 033605 45 GDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE 109 (115)
Q Consensus 45 ~~~~~~~vLDlG~G~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 109 (115)
...++.+|||+|||+|..+..+++. +...|+++|+++.+++.+++++...+..+.++++|+.+++
T Consensus 98 ~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~ 164 (464)
T 3m6w_A 98 DPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALA 164 (464)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHH
T ss_pred CcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhh
Confidence 4457889999999999999999964 3369999999999999999999988777889999987665
No 228
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.23 E-value=2.6e-11 Score=77.55 Aligned_cols=60 Identities=20% Similarity=0.191 Sum_probs=51.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhcc------------CCceeEEEccccC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADL------------ELDIDFVQCDIRN 107 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------------~~~v~~~~~d~~~ 107 (115)
.++.+|||+|||+|.++..+++.+..+|+++|+++.+++.|++++ .. ..+++++.+|+.+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~ 145 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFE 145 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHH
Confidence 367899999999999999999776679999999999999999987 32 2379999999754
No 229
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.23 E-value=2.9e-11 Score=81.73 Aligned_cols=86 Identities=21% Similarity=0.098 Sum_probs=65.8
Q ss_pred cccCCCchhhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc--------------CCCeEEEEeCChhHHHHHH
Q 033605 23 LEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL--------------GADQVIAIDIDSDSLELAS 88 (115)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~--------------~~~~v~~vD~s~~~~~~a~ 88 (115)
..++.+|..+...+++.+ ...++.+|||+|||+|.++..+++. ...+++|+|+++.++..|+
T Consensus 150 ~G~fyTP~~v~~~mv~~l----~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~ 225 (445)
T 2okc_A 150 AGQYFTPRPLIQAMVDCI----NPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLAS 225 (445)
T ss_dssp CGGGCCCHHHHHHHHHHH----CCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHH
T ss_pred CCcccCcHHHHHHHHHHh----CCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHH
Confidence 345677777665555543 3446779999999999999888753 2358999999999999999
Q ss_pred HHhhccCC---ceeEEEccccCCcccC
Q 033605 89 ENAADLEL---DIDFVQCDIRNLEWRG 112 (115)
Q Consensus 89 ~~~~~~~~---~v~~~~~d~~~~~~~~ 112 (115)
.+....+. ++.++++|....+...
T Consensus 226 ~nl~l~g~~~~~~~i~~gD~l~~~~~~ 252 (445)
T 2okc_A 226 MNLYLHGIGTDRSPIVCEDSLEKEPST 252 (445)
T ss_dssp HHHHHTTCCSSCCSEEECCTTTSCCSS
T ss_pred HHHHHhCCCcCCCCEeeCCCCCCcccC
Confidence 98876665 6789999988766543
No 230
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.22 E-value=3.7e-11 Score=76.61 Aligned_cols=61 Identities=18% Similarity=0.133 Sum_probs=51.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhc----c-CCceeEEEccccC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAAD----L-ELDIDFVQCDIRN 107 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~----~-~~~v~~~~~d~~~ 107 (115)
.++.+|||+|||+|.++..+++. +..+|+++|+++.+++.|++++.. . ..+++++.+|+.+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~ 140 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFM 140 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHH
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHH
Confidence 36789999999999999999976 567999999999999999998743 2 2279999999765
No 231
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.22 E-value=5.6e-11 Score=78.87 Aligned_cols=61 Identities=28% Similarity=0.218 Sum_probs=54.2
Q ss_pred CCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhcc---------------CC-ceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADL---------------EL-DIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~---------------~~-~v~~~~~d~~~~ 108 (115)
++.+|||+|||+|..++.++.. +..+|+++|+++.+++.+++|+..+ +. +++++++|+.++
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~ 124 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRL 124 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHH
Confidence 6789999999999999999975 5668999999999999999999887 66 599999998654
No 232
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.21 E-value=1.2e-10 Score=70.55 Aligned_cols=62 Identities=21% Similarity=0.307 Sum_probs=47.2
Q ss_pred HHHHHHhcCC-CCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCc
Q 033605 37 LYTAENSFGD-VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE 109 (115)
Q Consensus 37 ~~~~~~~~~~-~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 109 (115)
+..+.+.+.. .++.+|||+|||+|.++..+++. ..+|+|+|+++... ..+++++++|+.+.+
T Consensus 13 L~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~~----------~~~v~~~~~D~~~~~ 75 (191)
T 3dou_A 13 LEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEMEE----------IAGVRFIRCDIFKET 75 (191)
T ss_dssp HHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCCC----------CTTCEEEECCTTSSS
T ss_pred HHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEecccccc----------CCCeEEEEccccCHH
Confidence 3344444443 46789999999999999999977 56999999998520 117899999988765
No 233
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.20 E-value=9.3e-11 Score=78.92 Aligned_cols=68 Identities=21% Similarity=0.206 Sum_probs=58.6
Q ss_pred HhcCCCCCCeEEEEcCCCChHHHHHHhcC-CCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCc
Q 033605 42 NSFGDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE 109 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~G~G~~~~~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 109 (115)
..+...++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.++++....+.+++++++|+.+++
T Consensus 240 ~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~ 308 (429)
T 1sqg_A 240 TWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPS 308 (429)
T ss_dssp HHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTH
T ss_pred HHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhch
Confidence 33345578899999999999999999753 369999999999999999999988888899999998765
No 234
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.19 E-value=4.4e-11 Score=78.19 Aligned_cols=62 Identities=18% Similarity=0.186 Sum_probs=52.6
Q ss_pred CCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhcc-----CCceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADL-----ELDIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~v~~~~~d~~~~ 108 (115)
.++.+|||+|||+|.++..+++. +..+|+++|+++.+++.|++++... ..+++++++|+.++
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~ 186 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAF 186 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHH
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHH
Confidence 46789999999999999999976 3569999999999999999987642 23799999998654
No 235
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.19 E-value=6.1e-12 Score=80.30 Aligned_cols=70 Identities=19% Similarity=0.214 Sum_probs=49.2
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhh---ccCCceeEE--EccccCCc
Q 033605 37 LYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAA---DLELDIDFV--QCDIRNLE 109 (115)
Q Consensus 37 ~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~~~v~~~--~~d~~~~~ 109 (115)
+..+.+.....++.+|||+|||+|.++..+++. .+|+|+|+++ |+..+++... ..+.++.++ ++|+.+++
T Consensus 71 L~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~ 145 (276)
T 2wa2_A 71 LAWIDERGGVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME 145 (276)
T ss_dssp HHHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC
T ss_pred HHHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC
Confidence 344444433446789999999999999999977 5999999999 5433322111 111268899 99998876
No 236
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.19 E-value=3.6e-11 Score=77.13 Aligned_cols=53 Identities=25% Similarity=0.312 Sum_probs=42.6
Q ss_pred HHHHHHhcCC-CCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHH
Q 033605 37 LYTAENSFGD-VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASE 89 (115)
Q Consensus 37 ~~~~~~~~~~-~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~ 89 (115)
+..++..+.. .++.+|||+|||+|.++..+++.+..+|+|+|+|+.|++.+.+
T Consensus 73 l~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r 126 (291)
T 3hp7_A 73 LEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLR 126 (291)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHH
T ss_pred HHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHH
Confidence 3344455444 3567999999999999999998877799999999999988544
No 237
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.19 E-value=1e-10 Score=71.96 Aligned_cols=65 Identities=29% Similarity=0.383 Sum_probs=51.4
Q ss_pred HHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccC--Cccc
Q 033605 39 TAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRN--LEWR 111 (115)
Q Consensus 39 ~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~--~~~~ 111 (115)
.+.+.+. .++.+|||+|||+|..+..+++.+ .+++|+|+++.+++.++++.. .++++|+.+ .+++
T Consensus 24 ~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~ 90 (230)
T 3cc8_A 24 NLLKHIK-KEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKLD------HVVLGDIETMDMPYE 90 (230)
T ss_dssp HHHTTCC-TTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTSS------EEEESCTTTCCCCSC
T ss_pred HHHHHhc-cCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhCC------cEEEcchhhcCCCCC
Confidence 3344433 477899999999999999999775 699999999999999987653 678888876 4444
No 238
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.19 E-value=5.8e-11 Score=77.24 Aligned_cols=61 Identities=15% Similarity=0.168 Sum_probs=52.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhcc-----CCceeEEEccccC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADL-----ELDIDFVQCDIRN 107 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~v~~~~~d~~~ 107 (115)
.++.+|||+|||+|..+..+++. +..+|+++|+++.+++.|++++... ..+++++++|+.+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~ 181 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASK 181 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHH
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHH
Confidence 35689999999999999999976 4579999999999999999997652 2379999999765
No 239
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.18 E-value=5.5e-11 Score=76.56 Aligned_cols=60 Identities=17% Similarity=0.151 Sum_probs=51.4
Q ss_pred CCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhc----c-CCceeEEEccccC
Q 033605 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAAD----L-ELDIDFVQCDIRN 107 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~----~-~~~v~~~~~d~~~ 107 (115)
++.+|||+|||+|..+..+++. +..+|+++|+++.+++.|++++.. . ..+++++++|+.+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~ 155 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAE 155 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHH
Confidence 5689999999999999999976 557999999999999999998743 2 2379999999765
No 240
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.18 E-value=6.1e-11 Score=76.60 Aligned_cols=63 Identities=16% Similarity=0.113 Sum_probs=52.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhc----c-CCceeEEEccccCCc
Q 033605 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAAD----L-ELDIDFVQCDIRNLE 109 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~----~-~~~v~~~~~d~~~~~ 109 (115)
.++.+|||+|||+|..+..+++. +..+|+++|+++.+++.|++++.. . ..+++++.+|+.+++
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~ 162 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFV 162 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHH
Confidence 46789999999999999999976 456999999999999999998732 1 227999999987764
No 241
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.17 E-value=8.8e-12 Score=79.14 Aligned_cols=70 Identities=21% Similarity=0.123 Sum_probs=48.8
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHh---hccCCceeEE--EccccCCc
Q 033605 37 LYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENA---ADLELDIDFV--QCDIRNLE 109 (115)
Q Consensus 37 ~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~---~~~~~~v~~~--~~d~~~~~ 109 (115)
+..+.+.....++.+|||+|||+|.++..+++. .+|+|+|+++ |+..+++.. ...+.++.++ ++|+.+++
T Consensus 63 L~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~ 137 (265)
T 2oxt_A 63 LAWMEERGYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP 137 (265)
T ss_dssp HHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC
T ss_pred HHHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC
Confidence 344444433446789999999999999999877 5899999999 533222111 1112268899 99998876
No 242
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.17 E-value=5.4e-11 Score=77.15 Aligned_cols=62 Identities=21% Similarity=0.243 Sum_probs=52.3
Q ss_pred CCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhc-----c-CCceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAAD-----L-ELDIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~-----~-~~~v~~~~~d~~~~ 108 (115)
.++.+|||+|||+|..+..+++. +..+|+++|+++.+++.|++++.. . ..+++++.+|+.++
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~ 144 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAY 144 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHH
Confidence 36689999999999999999976 456999999999999999998754 2 23899999998663
No 243
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.17 E-value=5.6e-11 Score=79.44 Aligned_cols=81 Identities=20% Similarity=0.169 Sum_probs=59.2
Q ss_pred cccccCCCchhhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc--CCCeEEEEeCChhHHHHHHHHhhccCCce
Q 033605 21 VELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLELDI 98 (115)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~v 98 (115)
....++.++......+++.+ ...++.+|||+|||+|.++..+++. ...+++|+|+++.+++.| .++
T Consensus 16 ~~~g~~~TP~~l~~~~~~~~----~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a--------~~~ 83 (421)
T 2ih2_A 16 RSLGRVETPPEVVDFMVSLA----EAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP--------PWA 83 (421)
T ss_dssp -----CCCCHHHHHHHHHHC----CCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC--------TTE
T ss_pred ccCceEeCCHHHHHHHHHhh----ccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC--------CCC
Confidence 34556788877766666543 3335679999999999999999864 456999999999999877 268
Q ss_pred eEEEccccCCcccCC
Q 033605 99 DFVQCDIRNLEWRGK 113 (115)
Q Consensus 99 ~~~~~d~~~~~~~~~ 113 (115)
+++++|+.+++..++
T Consensus 84 ~~~~~D~~~~~~~~~ 98 (421)
T 2ih2_A 84 EGILADFLLWEPGEA 98 (421)
T ss_dssp EEEESCGGGCCCSSC
T ss_pred cEEeCChhhcCccCC
Confidence 899999987764433
No 244
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.17 E-value=6.9e-11 Score=76.38 Aligned_cols=61 Identities=15% Similarity=0.163 Sum_probs=52.0
Q ss_pred CCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhc----c-CCceeEEEccccC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAAD----L-ELDIDFVQCDIRN 107 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~----~-~~~v~~~~~d~~~ 107 (115)
.++.+|||+|||+|..+..+++. +..+|+++|+++.+++.|++++.. . ..+++++.+|+.+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~ 160 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFE 160 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHH
Confidence 46789999999999999999976 357999999999999999998754 1 2379999999865
No 245
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.17 E-value=1.9e-10 Score=70.71 Aligned_cols=53 Identities=15% Similarity=0.282 Sum_probs=46.8
Q ss_pred CCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccC
Q 033605 49 NKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG 112 (115)
Q Consensus 49 ~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 112 (115)
+.+|||+|||+|.++..++.. +|+|+|+.+++.++++ +++++++|+.++++++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~------~~~~~~~d~~~~~~~~ 100 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR------GVFVLKGTAENLPLKD 100 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT------TCEEEECBTTBCCSCT
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc------CCEEEEcccccCCCCC
Confidence 789999999999999988654 9999999999999887 5789999999888764
No 246
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.16 E-value=5.5e-11 Score=79.13 Aligned_cols=61 Identities=20% Similarity=0.145 Sum_probs=54.0
Q ss_pred CCCeEEEEcCCCChHHHHHHhc--CCCeEEEEeCChhHHHHHHHHhhccCC-c--eeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLEL-D--IDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~-~--v~~~~~d~~~~ 108 (115)
++.+|||++||+|.+++.++.. ++.+|+++|+++.+++.+++|+..++. + ++++++|+.++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~ 117 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFF 117 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHH
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHH
Confidence 5789999999999999999974 446999999999999999999999887 4 99999998553
No 247
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.16 E-value=7e-11 Score=76.65 Aligned_cols=60 Identities=18% Similarity=0.175 Sum_probs=51.8
Q ss_pred CCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhcc-----CCceeEEEccccC
Q 033605 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADL-----ELDIDFVQCDIRN 107 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~v~~~~~d~~~ 107 (115)
++.+|||+|||+|..+..+++. +..+|+++|+++.+++.|++++... ..+++++.+|+.+
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~ 173 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFE 173 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHH
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHH
Confidence 5679999999999999999976 4579999999999999999998653 2379999999865
No 248
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.14 E-value=1.2e-10 Score=74.56 Aligned_cols=62 Identities=15% Similarity=0.168 Sum_probs=52.7
Q ss_pred CCCCeEEEEcCCCChHHHHHHhcC-CCeEEEEeCChhHHHHHHHHhhcc-----CCceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADL-----ELDIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-----~~~v~~~~~d~~~~ 108 (115)
.++.+|||+|||+|..+..+++.. ..+++++|+++.+++.|++++... ..+++++.+|+.++
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~ 144 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKF 144 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHH
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHH
Confidence 467899999999999999999763 579999999999999999987653 23799999998653
No 249
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.14 E-value=3.8e-10 Score=80.01 Aligned_cols=80 Identities=24% Similarity=0.219 Sum_probs=63.6
Q ss_pred hhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcC----------------------------------------
Q 033605 31 HIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLG---------------------------------------- 70 (115)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~---------------------------------------- 70 (115)
...+.+...++......++.+|||++||+|.++++++...
T Consensus 173 pl~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~ 252 (703)
T 3v97_A 173 PIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGL 252 (703)
T ss_dssp SSCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcc
Confidence 3445555555555555567899999999999998887431
Q ss_pred ---CCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCcc
Q 033605 71 ---ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEW 110 (115)
Q Consensus 71 ---~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~ 110 (115)
..+++|+|+++.+++.|+.|+...+. .+++.++|+.++..
T Consensus 253 ~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~ 297 (703)
T 3v97_A 253 AEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN 297 (703)
T ss_dssp HHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCC
T ss_pred ccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCcc
Confidence 14799999999999999999999888 49999999988743
No 250
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.10 E-value=6.3e-10 Score=70.94 Aligned_cols=64 Identities=19% Similarity=0.206 Sum_probs=48.1
Q ss_pred CCCeEEEEcCCCCh----HHHHHHhc-C----CCeEEEEeCChhHHHHHHHHhhc-----------------------cC
Q 033605 48 SNKVVADFGCGCGT----LGAAATLL-G----ADQVIAIDIDSDSLELASENAAD-----------------------LE 95 (115)
Q Consensus 48 ~~~~vLDlG~G~G~----~~~~~~~~-~----~~~v~~vD~s~~~~~~a~~~~~~-----------------------~~ 95 (115)
++.+|||+|||+|. +++.+++. + ..+|+|+|+|+.|++.|++..-. .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 45555543 3 24899999999999999987410 01
Q ss_pred ---------CceeEEEccccCCccc
Q 033605 96 ---------LDIDFVQCDIRNLEWR 111 (115)
Q Consensus 96 ---------~~v~~~~~d~~~~~~~ 111 (115)
.+|.|.++|+.+.|++
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~ 209 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYN 209 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCC
T ss_pred ceeechhhcccCeEEecccCCCCCC
Confidence 1589999999886554
No 251
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.10 E-value=4.5e-10 Score=71.44 Aligned_cols=74 Identities=16% Similarity=0.156 Sum_probs=53.6
Q ss_pred HHHHHHHHhcCC-CCCCeEEEEcCCC--ChHHHHHHh--cCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCC
Q 033605 35 RMLYTAENSFGD-VSNKVVADFGCGC--GTLGAAATL--LGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNL 108 (115)
Q Consensus 35 ~~~~~~~~~~~~-~~~~~vLDlG~G~--G~~~~~~~~--~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~ 108 (115)
..+..++..+.. .....|||||||+ +.++..+++ .+..+|+++|.|+.|+..|++++...+. +++++++|+.+.
T Consensus 64 ~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~ 143 (277)
T 3giw_A 64 DWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDP 143 (277)
T ss_dssp HHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCH
T ss_pred HHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccCh
Confidence 344444444332 2336899999997 444555553 3567999999999999999999876543 799999999875
No 252
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.09 E-value=8.6e-11 Score=74.47 Aligned_cols=62 Identities=8% Similarity=-0.150 Sum_probs=51.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhcc-----CCceeEEEccccCCc
Q 033605 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADL-----ELDIDFVQCDIRNLE 109 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~v~~~~~d~~~~~ 109 (115)
..+.+|||+|||+|..+..+++.+ .+|+++|+++.+++.|++++... ..+++++.+|+.++.
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~ 137 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI 137 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH
Confidence 356899999999999999999776 89999999999999999876431 227899999987653
No 253
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.08 E-value=1.6e-10 Score=73.96 Aligned_cols=63 Identities=11% Similarity=0.153 Sum_probs=44.2
Q ss_pred CCCCeEEEEcCCCChHHHHHH----h-cCCCeE--EEEeCChhHHHHHHHHhhcc-CC-c--eeEEEccccCCc
Q 033605 47 VSNKVVADFGCGCGTLGAAAT----L-LGADQV--IAIDIDSDSLELASENAADL-EL-D--IDFVQCDIRNLE 109 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~----~-~~~~~v--~~vD~s~~~~~~a~~~~~~~-~~-~--v~~~~~d~~~~~ 109 (115)
.++.+|||+|||+|.++..++ . .+...+ +|+|+|+.|++.++++.... +. + +.+.++++++++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~ 124 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQ 124 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhh
Confidence 356799999999998765433 2 234444 99999999999999987653 22 4 445566666543
No 254
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.07 E-value=6.6e-10 Score=67.32 Aligned_cols=53 Identities=23% Similarity=0.309 Sum_probs=42.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHhc-C--CCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCc
Q 033605 47 VSNKVVADFGCGCGTLGAAATLL-G--ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE 109 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~-~--~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 109 (115)
.++.+|||+|||+|.++..+++. + ..+|+|+|+|+.+ . ..+++++++|+.+.+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---------~-~~~v~~~~~d~~~~~ 76 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---------P-IPNVYFIQGEIGKDN 76 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---------C-CTTCEEEECCTTTTS
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---------C-CCCceEEEccccchh
Confidence 46679999999999999999964 4 4699999999942 0 116899999998776
No 255
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.07 E-value=4.1e-10 Score=75.34 Aligned_cols=57 Identities=12% Similarity=0.125 Sum_probs=47.8
Q ss_pred HHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHH
Q 033605 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASEN 90 (115)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~ 90 (115)
.....+.++..+...++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++
T Consensus 92 ~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~ 148 (416)
T 4e2x_A 92 FAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREK 148 (416)
T ss_dssp HHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHc
Confidence 345566666666666788999999999999999998755 999999999999999876
No 256
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.06 E-value=1.4e-09 Score=71.50 Aligned_cols=74 Identities=19% Similarity=0.206 Sum_probs=57.8
Q ss_pred HHHHHhcCCCCCCeEEEEcCCCChHHHHHHh-cCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCCcccC
Q 033605 38 YTAENSFGDVSNKVVADFGCGCGTLGAAATL-LGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRG 112 (115)
Q Consensus 38 ~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~ 112 (115)
..++..+......+|+|+|||+|.++..+++ ++..+++..|. |.+++.++++....+. +|+++.+|+.+.|+++
T Consensus 169 ~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~~ 244 (353)
T 4a6d_A 169 RSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPE 244 (353)
T ss_dssp HHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCCC
T ss_pred HHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCCC
Confidence 3445555555677999999999999999995 56678899997 7899999998776554 8999999998766553
No 257
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.05 E-value=3.5e-10 Score=66.80 Aligned_cols=60 Identities=23% Similarity=0.276 Sum_probs=46.6
Q ss_pred HHHhcC-CCCCCeEEEEcCCCChHHHHHHhc-C-CCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCc
Q 033605 40 AENSFG-DVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE 109 (115)
Q Consensus 40 ~~~~~~-~~~~~~vLDlG~G~G~~~~~~~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 109 (115)
+...+. ..++.+|||+|||+|.++..+++. + ..+++|+|+++ ++.. .+++++++|+.+.+
T Consensus 13 ~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~---------~~~~~~~~d~~~~~ 75 (180)
T 1ej0_A 13 IQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI---------VGVDFLQGDFRDEL 75 (180)
T ss_dssp HHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC---------TTEEEEESCTTSHH
T ss_pred HHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc---------CcEEEEEcccccch
Confidence 333433 456779999999999999999865 3 36999999999 6532 26889999998765
No 258
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=99.05 E-value=8.4e-10 Score=70.22 Aligned_cols=68 Identities=19% Similarity=0.157 Sum_probs=56.1
Q ss_pred HHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCc
Q 033605 38 YTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE 109 (115)
Q Consensus 38 ~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 109 (115)
+.+++.+...++.++||.+||.|..+..+++. ..+|+|+|.++.+++.+++ ... .+++++++++.+++
T Consensus 12 ~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~--~rv~lv~~~f~~l~ 79 (285)
T 1wg8_A 12 QEALDLLAVRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL--PGLTVVQGNFRHLK 79 (285)
T ss_dssp HHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC--TTEEEEESCGGGHH
T ss_pred HHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc--CCEEEEECCcchHH
Confidence 34444445557889999999999999999977 4599999999999999998 654 38999999998764
No 259
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.04 E-value=1.7e-10 Score=72.95 Aligned_cols=68 Identities=15% Similarity=0.152 Sum_probs=50.8
Q ss_pred HHHhcCCCCC--CeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhh-------ccC-C--ceeEEEccccC
Q 033605 40 AENSFGDVSN--KVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAA-------DLE-L--DIDFVQCDIRN 107 (115)
Q Consensus 40 ~~~~~~~~~~--~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~-------~~~-~--~v~~~~~d~~~ 107 (115)
+.+.....++ .+|||+|||+|..++.++..+. +|+++|+++.++..++.+.. ..+ . +++++++|+.+
T Consensus 78 l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~ 156 (258)
T 2oyr_A 78 VAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLT 156 (258)
T ss_dssp HHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHH
T ss_pred HHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHH
Confidence 3344444455 7999999999999999998755 89999999987666655533 222 2 68999999876
Q ss_pred C
Q 033605 108 L 108 (115)
Q Consensus 108 ~ 108 (115)
+
T Consensus 157 ~ 157 (258)
T 2oyr_A 157 A 157 (258)
T ss_dssp H
T ss_pred H
Confidence 3
No 260
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.04 E-value=5.3e-10 Score=73.53 Aligned_cols=61 Identities=16% Similarity=0.090 Sum_probs=51.4
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccC---------CceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLE---------LDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---------~~v~~~~~d~~~~ 108 (115)
++.+||++|||+|..+.++++++..+|+++|+++.+++.|++++...+ .+++++.+|+.++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~ 257 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPV 257 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHH
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHH
Confidence 678999999999999999998766899999999999999999976421 1589999987653
No 261
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.03 E-value=6e-10 Score=73.63 Aligned_cols=68 Identities=12% Similarity=0.164 Sum_probs=52.1
Q ss_pred HHHHHHhcC-CCCCCeEEEEcCCCChHHHHHHh-cCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCccc
Q 033605 37 LYTAENSFG-DVSNKVVADFGCGCGTLGAAATL-LGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR 111 (115)
Q Consensus 37 ~~~~~~~~~-~~~~~~vLDlG~G~G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~ 111 (115)
...++..++ .....+|||+|||+|.++..+++ .+..+++++|+ +.+++.+++. .+++++.+|+.+ +++
T Consensus 191 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-~~p 260 (368)
T 3reo_A 191 MKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-----SGVEHLGGDMFD-GVP 260 (368)
T ss_dssp HHHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTT-CCC
T ss_pred HHHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-----CCCEEEecCCCC-CCC
Confidence 344555554 44568999999999999999986 55679999999 8888776532 279999999876 555
No 262
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=99.02 E-value=1.8e-09 Score=69.54 Aligned_cols=59 Identities=24% Similarity=0.205 Sum_probs=48.8
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhcc
Q 033605 34 SRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADL 94 (115)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 94 (115)
..+++.++.... .++.+|||++||+|..+..+++.+. +++|+|+++.+++.|++++...
T Consensus 222 ~~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 222 LELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp HHHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHHh
Confidence 345555555544 4788999999999999999988765 9999999999999999998764
No 263
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=99.02 E-value=6e-10 Score=77.95 Aligned_cols=65 Identities=22% Similarity=0.234 Sum_probs=51.7
Q ss_pred CCCeEEEEcCCCChHHHHHH---hcCCC--eEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCcccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT---LLGAD--QVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGK 113 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~---~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~ 113 (115)
++.+|||+|||+|-++...+ +.+.. +|++||.|+ +...+++....++. +|+++++|++++.+|++
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEK 428 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAPEK 428 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSC
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCCcc
Confidence 44689999999999855544 33332 789999998 66677887777776 89999999999999875
No 264
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.02 E-value=9.3e-10 Score=72.63 Aligned_cols=68 Identities=16% Similarity=0.106 Sum_probs=52.8
Q ss_pred HHHHHHhcC-CCCCCeEEEEcCCCChHHHHHHh-cCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCccc
Q 033605 37 LYTAENSFG-DVSNKVVADFGCGCGTLGAAATL-LGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR 111 (115)
Q Consensus 37 ~~~~~~~~~-~~~~~~vLDlG~G~G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~ 111 (115)
...++..++ ..+..+|||+|||+|..+..+++ ++..+++++|+ +.+++.+++. .+++++.+|+.+ |++
T Consensus 189 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~D~~~-~~p 258 (364)
T 3p9c_A 189 TKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-----PGVTHVGGDMFK-EVP 258 (364)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTT-CCC
T ss_pred HHHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-----CCeEEEeCCcCC-CCC
Confidence 344555555 45668999999999999999985 55679999999 8888766532 279999999987 655
No 265
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.02 E-value=2.8e-09 Score=73.65 Aligned_cols=88 Identities=16% Similarity=0.063 Sum_probs=69.5
Q ss_pred cccccCCCchhhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc----CCCeEEEEeCChhHHHHHHHHhhccCC
Q 033605 21 VELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL----GADQVIAIDIDSDSLELASENAADLEL 96 (115)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~----~~~~v~~vD~s~~~~~~a~~~~~~~~~ 96 (115)
....+|.+|..+...+++.+.......++.+|+|++||+|.+...+++. +...++|+|+++.++..|+.+....+.
T Consensus 194 k~~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi 273 (542)
T 3lkd_A 194 KKAGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGV 273 (542)
T ss_dssp -CCSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred ccCCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCC
Confidence 3456688999988888887764322346779999999999998888754 246899999999999999998876665
Q ss_pred ---ceeEEEccccCC
Q 033605 97 ---DIDFVQCDIRNL 108 (115)
Q Consensus 97 ---~v~~~~~d~~~~ 108 (115)
++.+.++|....
T Consensus 274 ~~~~~~I~~gDtL~~ 288 (542)
T 3lkd_A 274 PIENQFLHNADTLDE 288 (542)
T ss_dssp CGGGEEEEESCTTTS
T ss_pred CcCccceEecceecc
Confidence 578999998765
No 266
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.99 E-value=4.8e-10 Score=74.66 Aligned_cols=67 Identities=21% Similarity=0.164 Sum_probs=49.1
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCC------CChHHHHHHh-c-CCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccC
Q 033605 36 MLYTAENSFGDVSNKVVADFGCG------CGTLGAAATL-L-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRN 107 (115)
Q Consensus 36 ~~~~~~~~~~~~~~~~vLDlG~G------~G~~~~~~~~-~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~ 107 (115)
..+.++..+. .++.+||||||| +|..++.+++ . +..+|+|+|+|+.|. ....+++++++|+.+
T Consensus 205 ~Ye~lL~~l~-~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~~~~rI~fv~GDa~d 275 (419)
T 3sso_A 205 HYDRHFRDYR-NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------VDELRIRTIQGDQND 275 (419)
T ss_dssp HHHHHHGGGT-TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------GCBTTEEEEECCTTC
T ss_pred HHHHHHHhhc-CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------hcCCCcEEEEecccc
Confidence 3444444433 367899999999 7777777764 3 567999999999983 122389999999999
Q ss_pred Cccc
Q 033605 108 LEWR 111 (115)
Q Consensus 108 ~~~~ 111 (115)
+++.
T Consensus 276 lpf~ 279 (419)
T 3sso_A 276 AEFL 279 (419)
T ss_dssp HHHH
T ss_pred cchh
Confidence 8765
No 267
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=98.97 E-value=3.4e-09 Score=69.69 Aligned_cols=60 Identities=13% Similarity=0.046 Sum_probs=51.1
Q ss_pred CCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCc
Q 033605 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE 109 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 109 (115)
++..|||+|+|.|.+|..+++. .+.+|+++|+++..+...++.. .. .+++++++|+.+++
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~~-~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-EG-SPLQILKRDPYDWS 118 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-TT-SSCEEECSCTTCHH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-cC-CCEEEEECCccchh
Confidence 3589999999999999999964 4569999999999999998876 32 38999999997764
No 268
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.96 E-value=1.5e-09 Score=71.20 Aligned_cols=66 Identities=15% Similarity=0.083 Sum_probs=48.4
Q ss_pred HHHHHhcCCCCCCeEEEEcCCCChHHHHHHh-cCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEcccc
Q 033605 38 YTAENSFGDVSNKVVADFGCGCGTLGAAATL-LGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIR 106 (115)
Q Consensus 38 ~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~ 106 (115)
..++..+...++.+|||+|||+|..+..+++ .+..+++++|++ .++. +++....+. +++++.+|+.
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~d~~ 242 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEGDFL 242 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCCCGGGTTSEEEEECCTT
T ss_pred HHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--cccccccCCCCCeEEEecCCC
Confidence 3455666666778999999999999999986 455689999994 4544 333332222 7999999995
No 269
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.95 E-value=2e-09 Score=71.10 Aligned_cols=68 Identities=16% Similarity=0.051 Sum_probs=52.5
Q ss_pred HHHHHhcC-CCCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccC
Q 033605 38 YTAENSFG-DVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG 112 (115)
Q Consensus 38 ~~~~~~~~-~~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 112 (115)
..++..++ ..++.+|||+|||+|..+..+++. +..+++++|+ +.+++.+++. .+++++.+|+.+ +++.
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-~~~~ 267 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL-----SGIEHVGGDMFA-SVPQ 267 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTT-CCCC
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc-----CCCEEEeCCccc-CCCC
Confidence 45555554 456789999999999999999964 4568999999 8888776542 269999999977 6553
No 270
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.95 E-value=3.4e-09 Score=63.87 Aligned_cols=53 Identities=21% Similarity=0.181 Sum_probs=40.6
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhc-CC---------CeEEEEeCChhHHHHHHHHhhccCCceeEE-EccccCC
Q 033605 46 DVSNKVVADFGCGCGTLGAAATLL-GA---------DQVIAIDIDSDSLELASENAADLELDIDFV-QCDIRNL 108 (115)
Q Consensus 46 ~~~~~~vLDlG~G~G~~~~~~~~~-~~---------~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~-~~d~~~~ 108 (115)
..++.+|||+|||+|.++..+++. +. .+|+|+|+|+.+. . .+++++ ++|+.+.
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~---------~-~~~~~~~~~d~~~~ 83 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP---------L-EGATFLCPADVTDP 83 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC---------C-TTCEEECSCCTTSH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhccc---------C-CCCeEEEeccCCCH
Confidence 346789999999999999999965 43 6999999999520 0 157778 7777654
No 271
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.92 E-value=1.6e-09 Score=71.11 Aligned_cols=58 Identities=19% Similarity=0.223 Sum_probs=47.2
Q ss_pred CCCCeEEEEcCCCChHHHHHHh-cCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCccc
Q 033605 47 VSNKVVADFGCGCGTLGAAATL-LGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR 111 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~ 111 (115)
.++.+|||+|||+|..+..+++ .+..+++++|+ +.+++.+++. . +++++.+|+.+ +++
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~-~v~~~~~d~~~-~~p 245 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS----N-NLTYVGGDMFT-SIP 245 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB----T-TEEEEECCTTT-CCC
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC----C-CcEEEeccccC-CCC
Confidence 3567999999999999999996 45569999999 9998877642 2 59999999966 554
No 272
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.91 E-value=2.9e-09 Score=73.61 Aligned_cols=83 Identities=14% Similarity=0.081 Sum_probs=61.8
Q ss_pred cccCCCchhhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc----C---------------CCeEEEEeCChhH
Q 033605 23 LEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL----G---------------ADQVIAIDIDSDS 83 (115)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~----~---------------~~~v~~vD~s~~~ 83 (115)
..++.+|..+...+++.+ ...++.+|+|+|||+|.+...+++. . ...++|+|+++.+
T Consensus 148 ~G~fyTP~~iv~~mv~~l----~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~ 223 (541)
T 2ar0_A 148 AGQYFTPRPLIKTIIHLL----KPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGT 223 (541)
T ss_dssp --CCCCCHHHHHHHHHHH----CCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHH
T ss_pred CCeeeCCHHHHHHHHHHh----ccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHH
Confidence 445777777666555443 3446779999999999998887742 1 1379999999999
Q ss_pred HHHHHHHhhccCC-c-----eeEEEccccCCc
Q 033605 84 LELASENAADLEL-D-----IDFVQCDIRNLE 109 (115)
Q Consensus 84 ~~~a~~~~~~~~~-~-----v~~~~~d~~~~~ 109 (115)
+..|+.++...+. + +.++++|....+
T Consensus 224 ~~lA~~nl~l~gi~~~~~~~~~I~~gDtL~~~ 255 (541)
T 2ar0_A 224 RRLALMNCLLHDIEGNLDHGGAIRLGNTLGSD 255 (541)
T ss_dssp HHHHHHHHHTTTCCCBGGGTBSEEESCTTSHH
T ss_pred HHHHHHHHHHhCCCccccccCCeEeCCCcccc
Confidence 9999998876665 3 789999976543
No 273
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.88 E-value=1.6e-09 Score=70.06 Aligned_cols=66 Identities=15% Similarity=0.089 Sum_probs=45.3
Q ss_pred HHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeC----ChhHHHHHHHHhhccCC-ceeEEEc-cccCCc
Q 033605 40 AENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDI----DSDSLELASENAADLEL-DIDFVQC-DIRNLE 109 (115)
Q Consensus 40 ~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~----s~~~~~~a~~~~~~~~~-~v~~~~~-d~~~~~ 109 (115)
+.+.....++.+|||+|||+|.++..+++. .+|+|+|+ ++.+++... ....+. +++++++ |+..++
T Consensus 74 i~~~~~~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~D~~~l~ 145 (305)
T 2p41_A 74 FVERNLVTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MSTYGWNLVRLQSGVDVFFIP 145 (305)
T ss_dssp HHHTTSSCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCSTTGGGEEEECSCCTTTSC
T ss_pred HHHcCCCCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhhcCCCCeEEEeccccccCC
Confidence 344322345689999999999999999977 48999999 554432111 111112 6899999 888765
No 274
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.88 E-value=2.7e-09 Score=65.28 Aligned_cols=48 Identities=31% Similarity=0.517 Sum_probs=40.0
Q ss_pred CCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG 112 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 112 (115)
.++.+|||+|||+|.++..++ .+++|+|+|+. ++.++++|+.++++++
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~--------------~~~~~~~d~~~~~~~~ 113 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR----NPVHCFDLASL--------------DPRVTVCDMAQVPLED 113 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS--------------STTEEESCTTSCSCCT
T ss_pred CCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC--------------CceEEEeccccCCCCC
Confidence 466899999999999988773 58999999998 4578889998887754
No 275
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.88 E-value=9.6e-09 Score=59.35 Aligned_cols=54 Identities=13% Similarity=0.097 Sum_probs=41.0
Q ss_pred hhhHHHHHHHHHHhcCCCCCCeEEEEcCCCC-hHHHHHHhcCCCeEEEEeCChhHHH
Q 033605 30 PHIASRMLYTAENSFGDVSNKVVADFGCGCG-TLGAAATLLGADQVIAIDIDSDSLE 85 (115)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G-~~~~~~~~~~~~~v~~vD~s~~~~~ 85 (115)
....+.+.+.+.+.+. .+.+|||+|||.| ..+..+++.....|+++|+++.++.
T Consensus 19 ~~m~e~LaeYI~~~~~--~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~ 73 (153)
T 2k4m_A 19 SHMWNDLAVYIIRCSG--PGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG 73 (153)
T ss_dssp CHHHHHHHHHHHHHSC--SSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT
T ss_pred hhHHHHHHHHHHhcCC--CCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc
Confidence 3445566666665543 5679999999999 6999999733448999999998776
No 276
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=98.80 E-value=2.8e-08 Score=62.79 Aligned_cols=60 Identities=23% Similarity=0.266 Sum_probs=48.0
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccC
Q 033605 34 SRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLE 95 (115)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 95 (115)
..+++.++.... .++..|||++||+|..+..+.+.+. +++|+|+++.+++.+++++...+
T Consensus 199 ~~l~~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~~gr-~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 199 RDLIERIIRASS-NPNDLVLDCFMGSGTTAIVAKKLGR-NFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp HHHHHHHHHHHC-CTTCEEEESSCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcc
Confidence 345555555443 4788999999999999999988765 99999999999999999987654
No 277
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.79 E-value=1.6e-08 Score=64.92 Aligned_cols=56 Identities=25% Similarity=0.284 Sum_probs=40.6
Q ss_pred CCCCCCeEEEEcCCC------ChHHHHHHh-cC-CCeEEEEeCChhHHHHHHHHhhccCCceeE-EEccccCCcccCCC
Q 033605 45 GDVSNKVVADFGCGC------GTLGAAATL-LG-ADQVIAIDIDSDSLELASENAADLELDIDF-VQCDIRNLEWRGKY 114 (115)
Q Consensus 45 ~~~~~~~vLDlG~G~------G~~~~~~~~-~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~-~~~d~~~~~~~~~f 114 (115)
...++.+|||+|||+ |. ..+++ .+ ..+|+|+|+|+. . .++++ +++|+.++++++.|
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v----~~v~~~i~gD~~~~~~~~~f 124 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V----SDADSTLIGDCATVHTANKW 124 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B----CSSSEEEESCGGGCCCSSCE
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C----CCCEEEEECccccCCccCcc
Confidence 445778999999955 55 33443 34 369999999998 1 16788 99999988765443
No 278
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.72 E-value=1.5e-07 Score=67.55 Aligned_cols=88 Identities=18% Similarity=0.107 Sum_probs=61.4
Q ss_pred ccccccCCCchhhHHHHHHHHHHhc--CCCCCCeEEEEcCCCChHHHHHHhcC----CCeEEEEeCChhHHHHH--HHHh
Q 033605 20 KVELEQYPTGPHIASRMLYTAENSF--GDVSNKVVADFGCGCGTLGAAATLLG----ADQVIAIDIDSDSLELA--SENA 91 (115)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~vLDlG~G~G~~~~~~~~~~----~~~v~~vD~s~~~~~~a--~~~~ 91 (115)
......+.++..+...++..+.... ...++.+|||+|||+|.+...+++.. ..+++|+|+++.++..| +.+.
T Consensus 291 Rkk~GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL 370 (878)
T 3s1s_A 291 RGHEGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGL 370 (878)
T ss_dssp CCCCBSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHT
T ss_pred CCcCceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHH
Confidence 3345668899998888877632222 22357799999999999999988642 35899999999999999 5554
Q ss_pred hc----cCC-ceeEEEccccC
Q 033605 92 AD----LEL-DIDFVQCDIRN 107 (115)
Q Consensus 92 ~~----~~~-~v~~~~~d~~~ 107 (115)
.. .+. ...+...|+..
T Consensus 371 ~lN~LlhGi~~~~I~~dD~L~ 391 (878)
T 3s1s_A 371 LFPQLVSSNNAPTITGEDVCS 391 (878)
T ss_dssp TSTTTCBTTBCCEEECCCGGG
T ss_pred HHhhhhcCCCcceEEecchhc
Confidence 43 222 23555566654
No 279
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.72 E-value=1.5e-08 Score=66.66 Aligned_cols=57 Identities=14% Similarity=0.153 Sum_probs=46.0
Q ss_pred CCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCccc
Q 033605 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR 111 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~ 111 (115)
...+|||+|||+|.++..+++. +..+++++|+ +.+++.+++ . .+++++.+|+.+ +++
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~-~~v~~~~~d~~~-~~~ 250 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG----N-ENLNFVGGDMFK-SIP 250 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC----C-SSEEEEECCTTT-CCC
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc----C-CCcEEEeCccCC-CCC
Confidence 5679999999999999999964 4568999999 788876653 1 169999999987 655
No 280
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.71 E-value=2.3e-07 Score=56.61 Aligned_cols=58 Identities=19% Similarity=0.265 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC----ceeEEEccccC
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL----DIDFVQCDIRN 107 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~----~v~~~~~d~~~ 107 (115)
+.++|||+|| |+.++.+++....+|+++|.+++..+.+++++...+. +++++.+|+.+
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~ 91 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGP 91 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSS
T ss_pred CCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchh
Confidence 5679999998 5788888875356999999999999999999998773 79999999754
No 281
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.68 E-value=4.3e-08 Score=69.24 Aligned_cols=61 Identities=13% Similarity=0.231 Sum_probs=46.5
Q ss_pred CCeEEEEcCCCChHHHHHH---h-cC----------CCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCCcc
Q 033605 49 NKVVADFGCGCGTLGAAAT---L-LG----------ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEW 110 (115)
Q Consensus 49 ~~~vLDlG~G~G~~~~~~~---~-~~----------~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~ 110 (115)
+.+|||+|||+|-++...+ + .+ ..+|++||.++.++..++.... ++. .|+++++|++++.+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~l 486 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPG 486 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccc
Confidence 4689999999999975432 2 12 3499999999987766665544 343 79999999999987
No 282
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.66 E-value=2e-08 Score=69.48 Aligned_cols=83 Identities=17% Similarity=0.083 Sum_probs=61.9
Q ss_pred ccccCCCchhhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc--------C--------CCeEEEEeCChhHHH
Q 033605 22 ELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL--------G--------ADQVIAIDIDSDSLE 85 (115)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~--------~--------~~~v~~vD~s~~~~~ 85 (115)
...+|.+|..+...+++.+. . .+.+|+|++||+|.+...+++. . ...++|+|+++.++.
T Consensus 223 ~~G~fyTP~~Vv~lmv~ll~----p-~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~ 297 (544)
T 3khk_A 223 QGGQYYTPKSIVTLIVEMLE----P-YKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWK 297 (544)
T ss_dssp CSTTTCCCHHHHHHHHHHHC----C-CSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHH
T ss_pred cCCeEeCCHHHHHHHHHHHh----c-CCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHH
Confidence 44568888888877777652 2 3349999999999998876532 0 348999999999999
Q ss_pred HHHHHhhccCC--ceeEEEccccCCc
Q 033605 86 LASENAADLEL--DIDFVQCDIRNLE 109 (115)
Q Consensus 86 ~a~~~~~~~~~--~v~~~~~d~~~~~ 109 (115)
.|+.++...+. ++.+.++|....+
T Consensus 298 lA~~Nl~l~gi~~~i~i~~gDtL~~~ 323 (544)
T 3khk_A 298 LAAMNMVIRGIDFNFGKKNADSFLDD 323 (544)
T ss_dssp HHHHHHHHTTCCCBCCSSSCCTTTSC
T ss_pred HHHHHHHHhCCCcccceeccchhcCc
Confidence 99999877666 4444788866544
No 283
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.63 E-value=1e-07 Score=65.79 Aligned_cols=85 Identities=14% Similarity=0.033 Sum_probs=64.8
Q ss_pred ccccCCCchhhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc----C----------CCeEEEEeCChhHHHHH
Q 033605 22 ELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL----G----------ADQVIAIDIDSDSLELA 87 (115)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~----~----------~~~v~~vD~s~~~~~~a 87 (115)
...+|.+|.++..-+++.+ ...++.+|+|.+||+|.+...+.++ . ...++|+|+++.+...|
T Consensus 195 ~~GqfyTP~~Vv~lmv~l~----~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la 270 (530)
T 3ufb_A 195 DSGEFYTPRPVVRFMVEVM----DPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLV 270 (530)
T ss_dssp SCCCCCCCHHHHHHHHHHH----CCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHH
T ss_pred cCceECCcHHHHHHHHHhh----ccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHH
Confidence 4567899998887777654 3346779999999999998776532 1 23699999999999999
Q ss_pred HHHhhccCC-ceeEEEccccCCcc
Q 033605 88 SENAADLEL-DIDFVQCDIRNLEW 110 (115)
Q Consensus 88 ~~~~~~~~~-~v~~~~~d~~~~~~ 110 (115)
+-+..-.+. ...+.++|....|.
T Consensus 271 ~mNl~lhg~~~~~I~~~dtL~~~~ 294 (530)
T 3ufb_A 271 QMNLLLHGLEYPRIDPENSLRFPL 294 (530)
T ss_dssp HHHHHHHTCSCCEEECSCTTCSCG
T ss_pred HHHHHhcCCccccccccccccCch
Confidence 988776665 56777888766553
No 284
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.56 E-value=2.2e-07 Score=60.61 Aligned_cols=71 Identities=17% Similarity=0.176 Sum_probs=57.1
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc--CCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 35 RMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
-+++.+++.+...++.+++|..||.|..+..+++. +..+|+|+|.++.+++.++ ++ ...+++++++++.++
T Consensus 44 VLl~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL--~~~Rv~lv~~nF~~l 116 (347)
T 3tka_A 44 VLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI--DDPRFSIIHGPFSAL 116 (347)
T ss_dssp TTTHHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC--CCTTEEEEESCGGGH
T ss_pred ccHHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh--cCCcEEEEeCCHHHH
Confidence 35566666666678899999999999999999964 3469999999999999984 43 233899999988765
No 285
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.48 E-value=9.6e-07 Score=58.32 Aligned_cols=60 Identities=12% Similarity=0.016 Sum_probs=45.7
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcccC
Q 033605 46 DVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG 112 (115)
Q Consensus 46 ~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 112 (115)
..++.++||+||++|.++..+++.+. .|+|||+.+- -... ...+ +|+++++|+..+.++.
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~l-~~~l----~~~~-~V~~~~~d~~~~~~~~ 268 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGPM-AQSL----MDTG-QVTWLREDGFKFRPTR 268 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSCC-CHHH----HTTT-CEEEECSCTTTCCCCS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhhc-Chhh----ccCC-CeEEEeCccccccCCC
Confidence 34788999999999999999998865 9999998763 2221 1112 7899999988777654
No 286
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=98.46 E-value=8.3e-08 Score=62.48 Aligned_cols=71 Identities=11% Similarity=0.074 Sum_probs=54.2
Q ss_pred HHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccC
Q 033605 35 RMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRN 107 (115)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~ 107 (115)
.+++.++.... .+++.|||..||+|..+....+.+. +.+|+|+++.++..+++++...+.....++.|+.+
T Consensus 240 ~l~~~~i~~~~-~~~~~VlDpF~GsGtt~~aa~~~gr-~~ig~e~~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 310 (323)
T 1boo_A 240 KLPEFFIRMLT-EPDDLVVDIFGGSNTTGLVAERESR-KWISFEMKPEYVAASAFRFLDNNISEEKITDIYNR 310 (323)
T ss_dssp HHHHHHHHHHC-CTTCEEEETTCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHGGGSCSCSCHHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC-CEEEEeCCHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence 44444444432 4788999999999999999888765 99999999999999999988766555555555443
No 287
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.28 E-value=5.9e-06 Score=53.11 Aligned_cols=62 Identities=18% Similarity=0.217 Sum_probs=51.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhc-----cC-CceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAAD-----LE-LDIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~-----~~-~~v~~~~~d~~~~ 108 (115)
.++++||-+|.|.|....+++++ +..+|+.+||++..++.+++.+.. .. .+++++.+|+..+
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~ 150 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNF 150 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTT
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHH
Confidence 46789999999999999999986 457999999999999999997643 12 2799999997654
No 288
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.27 E-value=2e-06 Score=56.79 Aligned_cols=65 Identities=15% Similarity=0.129 Sum_probs=53.6
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhcC-CCeEEEEeCChhHHHHHHHHhhccCC-------ceeEEEccccCCc
Q 033605 45 GDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL-------DIDFVQCDIRNLE 109 (115)
Q Consensus 45 ~~~~~~~vLDlG~G~G~~~~~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-------~v~~~~~d~~~~~ 109 (115)
...++.+|||+++|.|.-+..+++.. ...|+++|+++..+..+++++...+. ++.+...|...++
T Consensus 145 ~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~ 217 (359)
T 4fzv_A 145 GLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWG 217 (359)
T ss_dssp CCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHH
T ss_pred CCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcc
Confidence 45678899999999999999988653 35899999999999999998876542 6888888887654
No 289
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=98.19 E-value=3.1e-06 Score=55.52 Aligned_cols=57 Identities=21% Similarity=0.199 Sum_probs=47.3
Q ss_pred CCeEEEEcCCCChHHHHHHhcC--CCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCc
Q 033605 49 NKVVADFGCGCGTLGAAATLLG--ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE 109 (115)
Q Consensus 49 ~~~vLDlG~G~G~~~~~~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 109 (115)
+.+++|+.||.|.+++.+.+.+ ...+.++|+++.+++..+.|... ..++++|+.++.
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~----~~~~~~Di~~~~ 60 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH----TQLLAKTIEGIT 60 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT----SCEECSCGGGCC
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc----cccccCCHHHcc
Confidence 4589999999999999998876 45799999999999999998763 346778877654
No 290
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.19 E-value=3.2e-06 Score=53.79 Aligned_cols=53 Identities=23% Similarity=0.233 Sum_probs=40.0
Q ss_pred hhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHh-cCCCeEEEEeCChhH
Q 033605 31 HIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATL-LGADQVIAIDIDSDS 83 (115)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~-~~~~~v~~vD~s~~~ 83 (115)
..+...+..+.+.+...++.+|||||||+|.++..+++ .+...|+|+|++..+
T Consensus 73 SRAAfKL~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~ 126 (282)
T 3gcz_A 73 SRGSAKLRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQG 126 (282)
T ss_dssp STHHHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTT
T ss_pred cHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCc
Confidence 33444455555666666778999999999999999885 556789999998653
No 291
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=98.19 E-value=6.3e-06 Score=53.60 Aligned_cols=60 Identities=17% Similarity=0.153 Sum_probs=46.0
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCCh---hHHHHHHHHhhccC
Q 033605 34 SRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDS---DSLELASENAADLE 95 (115)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~---~~~~~a~~~~~~~~ 95 (115)
..+++.++.... .+++.|||..||+|..+....+.+. +.+|+|+++ ..++.+++++...+
T Consensus 229 ~~l~~~~i~~~~-~~~~~vlDpF~GsGtt~~aa~~~~r-~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 229 AAVIERLVRALS-HPGSTVLDFFAGSGVTARVAIQEGR-NSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp HHHHHHHHHHHS-CTTCEEEETTCTTCHHHHHHHHHTC-EEEEEESSTHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHhC-CCCCEEEecCCCCCHHHHHHHHcCC-cEEEEECCccHHHHHHHHHHHHHHcc
Confidence 344555554433 4788999999999999999888765 999999999 99999999987655
No 292
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.14 E-value=5.8e-06 Score=51.47 Aligned_cols=78 Identities=15% Similarity=0.069 Sum_probs=52.9
Q ss_pred hhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHh-cCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEc-cccC
Q 033605 31 HIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATL-LGADQVIAIDIDSDSLELASENAADLEL-DIDFVQC-DIRN 107 (115)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~-d~~~ 107 (115)
......+..+.+.....++.+||||||++|.++..++. .+..+|+|+|+-+.-.+.- .....++. .++|.++ |+..
T Consensus 61 SRa~~KL~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P-~~~~s~gwn~v~fk~gvDv~~ 139 (267)
T 3p8z_A 61 SRGSAKLQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEP-VPMSTYGWNIVKLMSGKDVFY 139 (267)
T ss_dssp STHHHHHHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCC-CCCCCTTTTSEEEECSCCGGG
T ss_pred chHHHHHHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCc-chhhhcCcCceEEEeccceee
Confidence 33445556666666666788999999999999998885 5667999999887543110 01123344 5888888 8654
Q ss_pred Cc
Q 033605 108 LE 109 (115)
Q Consensus 108 ~~ 109 (115)
++
T Consensus 140 ~~ 141 (267)
T 3p8z_A 140 LP 141 (267)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 293
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=98.13 E-value=8.7e-06 Score=54.07 Aligned_cols=56 Identities=29% Similarity=0.302 Sum_probs=47.6
Q ss_pred CeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCc
Q 033605 50 KVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE 109 (115)
Q Consensus 50 ~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 109 (115)
.+++|+.||.|.++..+.+.+...+.++|+++.+++..+.|.. +..++++|+.++.
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~----~~~~~~~DI~~~~ 58 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFP----RSLHVQEDVSLLN 58 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCT----TSEEECCCGGGCC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCC----CCceEecChhhcC
Confidence 5899999999999999988877678899999999999988865 4567788887764
No 294
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.11 E-value=5e-06 Score=53.27 Aligned_cols=51 Identities=16% Similarity=0.015 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHh-cCCCeEEEEeCChh
Q 033605 32 IASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATL-LGADQVIAIDIDSD 82 (115)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~-~~~~~v~~vD~s~~ 82 (115)
.....+..+.+.....++.+||||||++|.++..++. .+..+|+|+|+...
T Consensus 78 R~~~KL~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~ 129 (321)
T 3lkz_A 78 RGTAKLRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGP 129 (321)
T ss_dssp THHHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCST
T ss_pred hHHHHHHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCC
Confidence 3444555666666666788999999999999998885 56678999998876
No 295
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.11 E-value=1.1e-06 Score=52.03 Aligned_cols=48 Identities=10% Similarity=-0.000 Sum_probs=40.3
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcc
Q 033605 45 GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW 110 (115)
Q Consensus 45 ~~~~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~ 110 (115)
...++.+|||+|||. +++|+|+.|++.|+++... +++++++|++++++
T Consensus 9 g~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~~---~~~~~~~d~~~~~~ 56 (176)
T 2ld4_A 9 GISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTGN---EGRVSVENIKQLLQ 56 (176)
T ss_dssp TCCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTTT---TSEEEEEEGGGGGG
T ss_pred CCCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhccc---CcEEEEechhcCcc
Confidence 445788999999996 2399999999999998654 48999999999887
No 296
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.06 E-value=9.5e-06 Score=51.52 Aligned_cols=51 Identities=20% Similarity=0.128 Sum_probs=37.3
Q ss_pred HHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhH
Q 033605 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDS 83 (115)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~ 83 (115)
+...+..+.+.....++.+|||||||+|.++..++.. +...++|+|++..+
T Consensus 59 aA~KL~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl 110 (277)
T 3evf_A 59 GTAKLRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDG 110 (277)
T ss_dssp HHHHHHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTT
T ss_pred HHHHHHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccC
Confidence 3444444555545556779999999999999998864 55688899988543
No 297
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.00 E-value=1.6e-05 Score=52.81 Aligned_cols=59 Identities=17% Similarity=0.120 Sum_probs=48.3
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhcc-----C----CceeEEEcccc
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADL-----E----LDIDFVQCDIR 106 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----~----~~v~~~~~d~~ 106 (115)
++++||-+|.|.|....++++++..+|+.+||++..++.|++.+... . .+++++.+|+.
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~ 272 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCI 272 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHH
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHH
Confidence 56799999999999999999877789999999999999999876431 1 14777777763
No 298
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.99 E-value=1.1e-05 Score=50.99 Aligned_cols=60 Identities=23% Similarity=0.155 Sum_probs=41.8
Q ss_pred CCCeEEEEcCCCChHHHHHHhc-------CC------CeEEEEeCCh---hHH-----------HHHHHHhhc-------
Q 033605 48 SNKVVADFGCGCGTLGAAATLL-------GA------DQVIAIDIDS---DSL-----------ELASENAAD------- 93 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~-------~~------~~v~~vD~s~---~~~-----------~~a~~~~~~------- 93 (115)
++.+|||+|+|+|..++.+++. .. .+++++|..| +.+ ..+++....
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 5579999999999988876532 22 4899999887 333 355555443
Q ss_pred -----c--C-CceeEEEccccC
Q 033605 94 -----L--E-LDIDFVQCDIRN 107 (115)
Q Consensus 94 -----~--~-~~v~~~~~d~~~ 107 (115)
. + .+++++.+|+.+
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~ 161 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINE 161 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHH
T ss_pred hhheeccCCceEEEEEECcHHH
Confidence 1 2 278899999865
No 299
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.95 E-value=3.3e-05 Score=50.40 Aligned_cols=56 Identities=21% Similarity=0.209 Sum_probs=45.5
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCc
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE 109 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 109 (115)
.+.+++|+.||.|.++..+.+.+...+.++|+++.+++..+.+..... ++|+.++.
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~~------~~Di~~~~ 65 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKP------EGDITQVN 65 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCCC------BSCGGGSC
T ss_pred CCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCCC------cCCHHHcC
Confidence 357899999999999999988887788999999999999999875421 46655543
No 300
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.91 E-value=5.9e-05 Score=50.60 Aligned_cols=60 Identities=18% Similarity=0.164 Sum_probs=47.8
Q ss_pred CCCCeEEEEcCCCChHHHHHH-hc-C-CCeEEEEeCChhHHHHHHHHhhc--c--C-CceeEEEcccc
Q 033605 47 VSNKVVADFGCGCGTLGAAAT-LL-G-ADQVIAIDIDSDSLELASENAAD--L--E-LDIDFVQCDIR 106 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~-~~-~-~~~v~~vD~s~~~~~~a~~~~~~--~--~-~~v~~~~~d~~ 106 (115)
.++.+++|+|++.|.++..++ +. + ..+|+++|++|...+.++++... + . .++++++.-+.
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~ 292 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAG 292 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEEC
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEE
Confidence 477899999999999999887 43 3 26999999999999999999876 1 1 26777765443
No 301
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.90 E-value=8.9e-05 Score=47.46 Aligned_cols=61 Identities=15% Similarity=0.051 Sum_probs=47.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHhc------CCCeEEEEeCCh--------------------------hHHHHHHHHhhcc
Q 033605 47 VSNKVVADFGCGCGTLGAAATLL------GADQVIAIDIDS--------------------------DSLELASENAADL 94 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~------~~~~v~~vD~s~--------------------------~~~~~a~~~~~~~ 94 (115)
..+..|||+|+..|..++.++.. ...+|+++|..+ ..++.+++++...
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 35779999999999999888742 256899999642 1467788888877
Q ss_pred CC---ceeEEEccccC
Q 033605 95 EL---DIDFVQCDIRN 107 (115)
Q Consensus 95 ~~---~v~~~~~d~~~ 107 (115)
+. +++++.||+.+
T Consensus 185 gl~~~~I~li~Gda~e 200 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKD 200 (282)
T ss_dssp TCCSTTEEEEESCHHH
T ss_pred CCCcCceEEEEeCHHH
Confidence 64 79999999854
No 302
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=97.86 E-value=5.7e-05 Score=49.04 Aligned_cols=56 Identities=16% Similarity=0.176 Sum_probs=46.9
Q ss_pred CeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCcc
Q 033605 50 KVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW 110 (115)
Q Consensus 50 ~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~ 110 (115)
.+||||.||.|.++.-+.+.+..-+.++|+++.+++..+.|.. -.++.+|+.++..
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~-----~~~~~~DI~~i~~ 56 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHS-----AKLIKGDISKISS 56 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCC-----SEEEESCGGGCCG
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCC-----CCcccCChhhCCH
Confidence 3799999999999998887777677899999999999988874 3677888877653
No 303
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=97.80 E-value=0.00014 Score=46.81 Aligned_cols=59 Identities=19% Similarity=0.074 Sum_probs=46.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHhcCCCe--EEEEeCChhHHHHHHHHhhccCCceeEEEccccCCc
Q 033605 47 VSNKVVADFGCGCGTLGAAATLLGADQ--VIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE 109 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~~~~~~~--v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 109 (115)
..+.+++|+.||.|.++..+.+.+... +.++|+++.+++..+.+.. +..+..+|+.++.
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~----~~~~~~~DI~~i~ 74 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ----GKIMYVGDVRSVT 74 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT----TCEEEECCGGGCC
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC----CCceeCCChHHcc
Confidence 356689999999999999888776544 6999999999988887764 2356778887664
No 304
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.66 E-value=0.0001 Score=47.26 Aligned_cols=47 Identities=17% Similarity=0.075 Sum_probs=35.1
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChh
Q 033605 36 MLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSD 82 (115)
Q Consensus 36 ~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~ 82 (115)
.+..+.+.....++.+||||||++|.++..+++. +...|+|+|+...
T Consensus 69 KL~ei~ek~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~ 116 (300)
T 3eld_A 69 KIRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIE 116 (300)
T ss_dssp HHHHHHHHTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCT
T ss_pred HHHHHHHhCCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccc
Confidence 3334444433346789999999999999999964 5668999999754
No 305
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=97.60 E-value=0.00018 Score=47.02 Aligned_cols=56 Identities=20% Similarity=0.307 Sum_probs=45.0
Q ss_pred CeEEEEcCCCChHHHHHHhcCC--CeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCc
Q 033605 50 KVVADFGCGCGTLGAAATLLGA--DQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE 109 (115)
Q Consensus 50 ~~vLDlG~G~G~~~~~~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 109 (115)
.+++|+.||.|.++..+.+.+. .-+.++|+++.+++..+.|... ..++++|+.++.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~----~~~~~~DI~~~~ 61 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE----TNLLNRNIQQLT 61 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT----SCEECCCGGGCC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC----CceeccccccCC
Confidence 4899999999999998887654 5688999999999999988763 345667776654
No 306
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.59 E-value=0.0002 Score=46.78 Aligned_cols=57 Identities=18% Similarity=0.207 Sum_probs=45.1
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCC--CeE-EEEeCChhHHHHHHHHhhccCCceeEEEccccCCc
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGA--DQV-IAIDIDSDSLELASENAADLELDIDFVQCDIRNLE 109 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~--~~v-~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 109 (115)
++.+++|+.||.|.++..+.+.+. ..+ .++|+++.+++..+.|.... ++++|+.++.
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-----~~~~DI~~~~ 68 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-----VQVKNLDSIS 68 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-----CBCCCTTTCC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-----cccCChhhcC
Confidence 456899999999999999887763 456 79999999999999987542 4566766654
No 307
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.57 E-value=5.6e-05 Score=48.28 Aligned_cols=57 Identities=5% Similarity=-0.053 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEcccc
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIR 106 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~ 106 (115)
.+..+||+.+|+|.+++++++. ..+++.+|.++..++..++++... .++++++.|+.
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~-~d~~vfvE~~~~a~~~L~~Nl~~~-~~~~V~~~D~~ 147 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRS-QDRLYLCELHPTEYNFLLKLPHFN-KKVYVNHTDGV 147 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCT-TSEEEEECCSHHHHHHHTTSCCTT-SCEEEECSCHH
T ss_pred cCCCceeEeCCcHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHhCcC-CcEEEEeCcHH
Confidence 5678999999999999999884 579999999999999999998752 37999999963
No 308
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=97.48 E-value=0.00027 Score=48.41 Aligned_cols=60 Identities=15% Similarity=0.155 Sum_probs=46.7
Q ss_pred CCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCc
Q 033605 49 NKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE 109 (115)
Q Consensus 49 ~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 109 (115)
..+++|+.||.|.++.-+.+.+..-|.++|+++.+++..+.+....+ +..++++|+.++.
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~p-~~~~~~~DI~~i~ 147 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCDP-ATHHFNEDIRDIT 147 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCCT-TTCEEESCTHHHH
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccCC-Ccceeccchhhhh
Confidence 45899999999999999887776668999999999999888863222 3456667776553
No 309
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.37 E-value=0.00042 Score=43.71 Aligned_cols=40 Identities=20% Similarity=0.101 Sum_probs=30.1
Q ss_pred hhhHHHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHhc
Q 033605 30 PHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL 69 (115)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~~ 69 (115)
...+...+.++.++.-..++.+||||||+.|.++..+++.
T Consensus 55 RSRAayKL~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~ 94 (269)
T 2px2_A 55 VSRGTAKLRWLVERRFVQPIGKVVDLGCGRGGWSYYAATM 94 (269)
T ss_dssp SSTHHHHHHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTS
T ss_pred ccHHHHHHHHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhh
Confidence 3344555666666654556889999999999999999865
No 310
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.13 E-value=0.0034 Score=41.72 Aligned_cols=44 Identities=14% Similarity=0.141 Sum_probs=28.4
Q ss_pred CCeEEEEcCCCChHHHHHHhc----------------CCCeEEEEeCChhHHHHHHHHhh
Q 033605 49 NKVVADFGCGCGTLGAAATLL----------------GADQVIAIDIDSDSLELASENAA 92 (115)
Q Consensus 49 ~~~vLDlG~G~G~~~~~~~~~----------------~~~~v~~vD~s~~~~~~a~~~~~ 92 (115)
+.+|+|+|||+|.+++.+... +.-.|+..|+.....+..-+.+.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~ 112 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLP 112 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSC
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhh
Confidence 578999999999999887422 12355556655555544444433
No 311
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=96.70 E-value=0.0012 Score=47.60 Aligned_cols=56 Identities=16% Similarity=0.217 Sum_probs=42.7
Q ss_pred CCCeEEEEcCCCChHHHHHHhcC------CCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccC
Q 033605 48 SNKVVADFGCGCGTLGAAATLLG------ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRN 107 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~ 107 (115)
+..+||||.||.|.++.-+.+.+ ..-+.++|+++.+++..+.|... ..+.+.|+.+
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp~----~~~~~~di~~ 272 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHPQ----TEVRNEKADE 272 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCTT----SEEEESCHHH
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCCC----CceecCcHHH
Confidence 45689999999999987776543 34678999999999999888763 4566666543
No 312
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=96.66 E-value=0.013 Score=36.92 Aligned_cols=61 Identities=23% Similarity=0.327 Sum_probs=47.0
Q ss_pred CCCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
.+++++|=-|++.|. .+..+++.+. +|+.+|.+++.++...+.....+.++.++++|+.+.
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~ 68 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKK 68 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCH
Confidence 478888888877665 3344445544 999999999999888888777777889999998764
No 313
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=96.64 E-value=0.0035 Score=46.55 Aligned_cols=54 Identities=20% Similarity=0.208 Sum_probs=42.4
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCC-CeEEEEeCChhHHHHHHHHhhccCCceeEEEccc
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGA-DQVIAIDIDSDSLELASENAADLELDIDFVQCDI 105 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~ 105 (115)
...+++||.||.|.++.-+.+.+. .-+.++|+++.+++..+.|... ..++.+|+
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p~----~~~~~~DI 593 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPG----STVFTEDC 593 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCTT----SEEECSCH
T ss_pred CCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCCC----CccccccH
Confidence 456899999999999998887775 4678999999999988887652 34444443
No 314
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=96.44 E-value=0.04 Score=36.85 Aligned_cols=49 Identities=18% Similarity=0.123 Sum_probs=35.1
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhc--------CCCeEEEEeCChhHHHHHHHHhhc
Q 033605 45 GDVSNKVVADFGCGCGTLGAAATLL--------GADQVIAIDIDSDSLELASENAAD 93 (115)
Q Consensus 45 ~~~~~~~vLDlG~G~G~~~~~~~~~--------~~~~v~~vD~s~~~~~~a~~~~~~ 93 (115)
..+.+-.|+|+|+|+|.+...+++. ...+++.||+|+...+.=++.+..
T Consensus 77 g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 133 (387)
T 1zkd_A 77 DEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAG 133 (387)
T ss_dssp TCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTT
T ss_pred CCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcC
Confidence 3344557999999999998776531 234899999999877655555443
No 315
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=96.02 E-value=0.046 Score=35.79 Aligned_cols=61 Identities=18% Similarity=0.324 Sum_probs=44.8
Q ss_pred CCCeEEEEcCCCChHHHHHHhc-CCCeEEEEeCChhHHHHHHHHhhcc----------------------CCceeEEEcc
Q 033605 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADL----------------------ELDIDFVQCD 104 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~----------------------~~~v~~~~~d 104 (115)
....|+.||||.......+... +...++-+|. |+.++.-++.+... ..+..++.+|
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 4568999999999999988753 4456777777 77776666655443 1378899999
Q ss_pred ccCCc
Q 033605 105 IRNLE 109 (115)
Q Consensus 105 ~~~~~ 109 (115)
+.+.+
T Consensus 176 L~d~~ 180 (334)
T 1rjd_A 176 LNDIT 180 (334)
T ss_dssp TTCHH
T ss_pred CCCcH
Confidence 88754
No 316
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.01 E-value=0.039 Score=35.82 Aligned_cols=50 Identities=24% Similarity=0.188 Sum_probs=38.6
Q ss_pred HHhcCCCCCCeEEEEcCCC-ChHHHHHHhcCCCeEEEEeCChhHHHHHHHH
Q 033605 41 ENSFGDVSNKVVADFGCGC-GTLGAAATLLGADQVIAIDIDSDSLELASEN 90 (115)
Q Consensus 41 ~~~~~~~~~~~vLDlG~G~-G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~ 90 (115)
+......++++||-.|+|. |..+..+++....+|+++|.+++.++.+++.
T Consensus 159 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l 209 (340)
T 3s2e_A 159 LKVTDTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRL 209 (340)
T ss_dssp HHTTTCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT
T ss_pred HHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc
Confidence 3444566888999999874 7777778864445999999999999888763
No 317
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.99 E-value=0.017 Score=38.42 Aligned_cols=48 Identities=35% Similarity=0.331 Sum_probs=37.2
Q ss_pred HhcCCCCCCeEEEEcCCC-ChHHHHHHh-cCCCeEEEEeCChhHHHHHHH
Q 033605 42 NSFGDVSNKVVADFGCGC-GTLGAAATL-LGADQVIAIDIDSDSLELASE 89 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~G~-G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~ 89 (115)
......++++||-+|+|. |.++..+++ .+..+|+++|.+++.++.+++
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD 228 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 344566788999999874 777777775 454599999999999888764
No 318
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=95.84 E-value=0.016 Score=44.39 Aligned_cols=45 Identities=20% Similarity=0.241 Sum_probs=38.4
Q ss_pred CCCeEEEEcCCCChHHHHHHhcCC-CeEEEEeCChhHHHHHHHHhh
Q 033605 48 SNKVVADFGCGCGTLGAAATLLGA-DQVIAIDIDSDSLELASENAA 92 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~~-~~v~~vD~s~~~~~~a~~~~~ 92 (115)
+..+++||.||.|.++.-+.+.+. .-+.++|+++.+++..+.|..
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p 895 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNP 895 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCT
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC
Confidence 456899999999999998887765 468899999999999888764
No 319
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=95.83 E-value=0.12 Score=32.23 Aligned_cols=61 Identities=23% Similarity=0.212 Sum_probs=44.6
Q ss_pred CCCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
.+++++|=.|++.|. ++..+++.+. +|+.++.+++.++...+.....+.++.++.+|+.+.
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 72 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDD 72 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH
Confidence 367788888876654 3344445544 899999999888877777666666888999998764
No 320
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=95.76 E-value=0.067 Score=33.24 Aligned_cols=60 Identities=22% Similarity=0.096 Sum_probs=43.2
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++.|. ++..+++.+. +|+.++.+++.++.+.......+.++.++.+|+.+.
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 68 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNE 68 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCH
Confidence 56788888876553 2333444544 999999999888877777766666889999998764
No 321
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.74 E-value=0.027 Score=37.04 Aligned_cols=49 Identities=31% Similarity=0.410 Sum_probs=37.4
Q ss_pred HhcCCCCCCeEEEEcCCC-ChHHHHHHh-cCCCeEEEEeCChhHHHHHHHH
Q 033605 42 NSFGDVSNKVVADFGCGC-GTLGAAATL-LGADQVIAIDIDSDSLELASEN 90 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~G~-G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~~ 90 (115)
+.....++++||-+|+|. |..+..+++ .+...|+++|.+++.++.+++.
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l 234 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL 234 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc
Confidence 444556788999999874 667777775 4555799999999999888764
No 322
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=95.62 E-value=0.037 Score=34.86 Aligned_cols=60 Identities=22% Similarity=0.211 Sum_probs=44.7
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=-|++.|. .+..+++.+. +|+.+|.+++.++...+.....+.++.++++|+.+.
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~ 70 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDE 70 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCH
Confidence 67788888876654 2344445554 999999999998887777776666888888888653
No 323
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.59 E-value=0.042 Score=35.95 Aligned_cols=49 Identities=27% Similarity=0.262 Sum_probs=36.7
Q ss_pred HhcCCCCCCeEEEEcCCC-ChHHHHHHhc-CCCeEEEEeCChhHHHHHHHH
Q 033605 42 NSFGDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASEN 90 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~G~-G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~ 90 (115)
......++++||-+|+|. |..+..+++. +..+|+++|.+++.++.+++.
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 215 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI 215 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 344566788999999873 6666777754 444999999999988887653
No 324
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=95.52 E-value=0.087 Score=34.12 Aligned_cols=58 Identities=19% Similarity=0.153 Sum_probs=43.1
Q ss_pred CCeEEEEcCCCChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccC----CceeEEEccccC
Q 033605 49 NKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLE----LDIDFVQCDIRN 107 (115)
Q Consensus 49 ~~~vLDlG~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~v~~~~~d~~~ 107 (115)
..-|++||||.=.....+.......++=+| .|..+...++.+...+ .+..++.+|+.+
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d 164 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ 164 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS
T ss_pred CCeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh
Confidence 346999999988886665432235888899 5888888888876432 278899999876
No 325
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=95.52 E-value=0.11 Score=32.09 Aligned_cols=59 Identities=25% Similarity=0.258 Sum_probs=42.5
Q ss_pred CCCeEEEEcCCCChHHHH----HHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~----~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++. .++.. +++.+. +|+.++.+++..+...+.....+.++.++.+|+.+.
T Consensus 8 ~~k~vlITGas~-giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 70 (253)
T 3qiv_A 8 ENKVGIVTGSGG-GIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDP 70 (253)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSH
T ss_pred CCCEEEEECCCC-hHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCH
Confidence 567888888654 44444 344444 899999999988877777666555788889988764
No 326
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=95.51 E-value=0.11 Score=32.42 Aligned_cols=61 Identities=16% Similarity=0.163 Sum_probs=45.0
Q ss_pred CCCCeEEEEcCC----CCh-HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCC
Q 033605 47 VSNKVVADFGCG----CGT-LGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G----~G~-~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~ 108 (115)
.+++++|=-|++ .|. .+..+++.+. +|+.++.+++..+.+.+...+.+. ++.++++|+.+.
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 70 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSD 70 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCH
Confidence 378899999853 343 3444556655 999999999988888877776554 788889988653
No 327
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.49 E-value=0.05 Score=35.44 Aligned_cols=50 Identities=12% Similarity=0.014 Sum_probs=37.5
Q ss_pred HHhcCCCCCCeEEEEcCCC-ChHHHHHHhcCCCeEEEEeCChhHHHHHHHH
Q 033605 41 ENSFGDVSNKVVADFGCGC-GTLGAAATLLGADQVIAIDIDSDSLELASEN 90 (115)
Q Consensus 41 ~~~~~~~~~~~vLDlG~G~-G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~ 90 (115)
+......++++||-.|+|. |..+..+++....+|+++|.+++..+.+++.
T Consensus 169 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l 219 (348)
T 3two_A 169 LKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSM 219 (348)
T ss_dssp HHHTTCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHT
T ss_pred HHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhc
Confidence 3344666888999999863 6666777764445999999999999988763
No 328
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=95.44 E-value=0.02 Score=38.47 Aligned_cols=46 Identities=11% Similarity=-0.072 Sum_probs=37.3
Q ss_pred CCCeEEEEcCCCChHHHHHHhcC--CCe----EEEEeCChhHHHHHHHHhhc
Q 033605 48 SNKVVADFGCGCGTLGAAATLLG--ADQ----VIAIDIDSDSLELASENAAD 93 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~~--~~~----v~~vD~s~~~~~~a~~~~~~ 93 (115)
+..+|+|+.||.|.....+.+.+ ..- |.++|+++.++...+.+...
T Consensus 9 ~~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 9 KVIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred ccceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 34689999999999988887654 223 78899999999998888764
No 329
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=95.43 E-value=0.12 Score=32.93 Aligned_cols=61 Identities=23% Similarity=0.348 Sum_probs=43.9
Q ss_pred CCCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
.+++++|=.|++.|. ++..+++.+ .+|+.++.++..++.+.+.....+.++.++.+|+.+.
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~ 92 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRG-ARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHL 92 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCH
Confidence 366788888876543 233344454 4899999999988887777666666889999998764
No 330
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=95.42 E-value=0.12 Score=32.14 Aligned_cols=59 Identities=27% Similarity=0.271 Sum_probs=42.3
Q ss_pred CCCeEEEEcCCCChHHHHH----HhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~----~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++. .++..+ ++.+ .+|+.++.+++.++.+.......+.++.++.+|+.+.
T Consensus 5 ~~k~vlVTGas~-gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 67 (257)
T 3imf_A 5 KEKVVIITGGSS-GMGKGMATRFAKEG-ARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNT 67 (257)
T ss_dssp TTCEEEETTTTS-HHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCH
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH
Confidence 566788777654 444443 3444 4899999999988887777766555788999998764
No 331
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.41 E-value=0.09 Score=29.62 Aligned_cols=52 Identities=17% Similarity=0.195 Sum_probs=33.6
Q ss_pred CeEEEEcCCC-ChHHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccC
Q 033605 50 KVVADFGCGC-GTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRN 107 (115)
Q Consensus 50 ~~vLDlG~G~-G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~ 107 (115)
.+|+=+|||. |......+.....+|+++|.+++.++.++.. .+.++.+|..+
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~------g~~~i~gd~~~ 60 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRER------GVRAVLGNAAN 60 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT------TCEEEESCTTS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc------CCCEEECCCCC
Confidence 5788888763 3333322222234999999999998877642 35677777654
No 332
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.41 E-value=0.071 Score=35.13 Aligned_cols=47 Identities=21% Similarity=0.220 Sum_probs=35.9
Q ss_pred cCCCCCCeEEEEcCCC-ChHHHHHHhcCCCeEEEEeCChhHHHHHHHH
Q 033605 44 FGDVSNKVVADFGCGC-GTLGAAATLLGADQVIAIDIDSDSLELASEN 90 (115)
Q Consensus 44 ~~~~~~~~vLDlG~G~-G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~ 90 (115)
....++++||-+|+|. |..+..+++....+|+++|.+++.++.+++.
T Consensus 190 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~l 237 (369)
T 1uuf_A 190 WQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKAL 237 (369)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc
Confidence 3556788999999873 6666677764445899999999999888763
No 333
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.39 E-value=0.072 Score=35.37 Aligned_cols=47 Identities=32% Similarity=0.316 Sum_probs=36.1
Q ss_pred hcCCCCCCeEEEEcCCC-ChHHHHHHhc-CCCeEEEEeCChhHHHHHHH
Q 033605 43 SFGDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASE 89 (115)
Q Consensus 43 ~~~~~~~~~vLDlG~G~-G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~ 89 (115)
.....++++||-+|+|. |.++..+++. +...|+++|.+++.++.+++
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 180 TAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA 228 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred HcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH
Confidence 34556788999999863 6677777764 44589999999999988865
No 334
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=95.35 E-value=0.025 Score=37.78 Aligned_cols=20 Identities=25% Similarity=0.373 Sum_probs=17.2
Q ss_pred CCeEEEEcCCCChHHHHHHh
Q 033605 49 NKVVADFGCGCGTLGAAATL 68 (115)
Q Consensus 49 ~~~vLDlG~G~G~~~~~~~~ 68 (115)
..+|+|+||++|..++.+..
T Consensus 53 ~~~IaDlGCssG~NT~~~v~ 72 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVR 72 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHH
T ss_pred ceEEEecCCCCCchHHHHHH
Confidence 57899999999999887763
No 335
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=95.30 E-value=0.21 Score=31.03 Aligned_cols=60 Identities=32% Similarity=0.427 Sum_probs=42.9
Q ss_pred CCCeEEEEcC-CCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCC
Q 033605 48 SNKVVADFGC-GCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~-G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~ 108 (115)
+++++|=.|+ |.|. ++..+++.+. +|+.++.++...+...+.....+. ++.++.+|+.+.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~ 85 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTST 85 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCH
Confidence 6678888887 4443 3344455554 899999999888777776655443 789999998764
No 336
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=95.29 E-value=0.17 Score=32.07 Aligned_cols=60 Identities=17% Similarity=0.143 Sum_probs=42.3
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++.|. ++..+++.+. +|+.++.+++.++.........+.++.++.+|+.+.
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~ 89 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDE 89 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH
Confidence 56788888866543 2333444544 999999999888877777665555788899988764
No 337
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=95.25 E-value=0.042 Score=37.24 Aligned_cols=70 Identities=20% Similarity=0.368 Sum_probs=44.2
Q ss_pred cccCCCchhhHHH----HHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHh----cC--CCeEEEEeCChhHHHHHHHHhh
Q 033605 23 LEQYPTGPHIASR----MLYTAENSFGDVSNKVVADFGCGCGTLGAAATL----LG--ADQVIAIDIDSDSLELASENAA 92 (115)
Q Consensus 23 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~----~~--~~~v~~vD~s~~~~~~a~~~~~ 92 (115)
-.+|.+.++.+.- +..++.+......+.+|+|+|+|+|.+...+++ .+ ..+++.||+|+...+.=++.+.
T Consensus 108 ~GDFiTAPeiS~~FGe~la~~~~~~~~~~g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 187 (432)
T 4f3n_A 108 GSDFVTAPELSPLFAQTLARPVAQALDASGTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLG 187 (432)
T ss_dssp --CCSSCGGGHHHHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHH
T ss_pred CCCccCchhhhHHHHHHHHHHHHHHHHhcCCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHh
Confidence 3467777766432 222222222211256999999999998777653 12 3489999999988866666554
No 338
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=95.25 E-value=0.15 Score=32.17 Aligned_cols=60 Identities=17% Similarity=0.214 Sum_probs=41.5
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++.|. ++..+++.+ .+|+.++.+++.++...+.....+.++.++.+|+.+.
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~ 85 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARG-IAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTST 85 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCH
Confidence 56688888865543 233344454 4899999999888777776666666888999998764
No 339
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=95.24 E-value=0.15 Score=31.70 Aligned_cols=60 Identities=17% Similarity=0.267 Sum_probs=42.5
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++.|. ++..+++.+. +|+.++.+++..+...+.....+.++.++.+|+.+.
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~ 73 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDE 73 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCH
Confidence 56788877766543 2333445555 899999999888777776666566888899998764
No 340
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=95.22 E-value=0.12 Score=32.20 Aligned_cols=60 Identities=22% Similarity=0.318 Sum_probs=43.1
Q ss_pred CCCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
.+++++|=.|++ |.++..++ +.+ .+|+.++-++..++...+.....+.++.++.+|+.+.
T Consensus 27 l~~k~vlITGas-~gIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 90 (262)
T 3rkr_A 27 LSGQVAVVTGAS-RGIGAAIARKLGSLG-ARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHS 90 (262)
T ss_dssp TTTCEEEESSTT-SHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCH
T ss_pred cCCCEEEEECCC-ChHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCH
Confidence 366788877765 44544444 444 4899999999888877777666666788899988654
No 341
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=95.12 E-value=0.15 Score=31.31 Aligned_cols=59 Identities=15% Similarity=0.173 Sum_probs=42.0
Q ss_pred CCCeEEEEcCCCChHHHHH----HhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~----~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++ |.++..+ ++.+ .+|+.++.++...+.........+.++.++.+|+.+.
T Consensus 4 ~~k~vlITGas-~gIG~~~a~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 66 (247)
T 3lyl_A 4 NEKVALVTGAS-RGIGFEVAHALASKG-ATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDI 66 (247)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCH
Confidence 45678877755 4444444 3444 4999999999888877777666666888999988764
No 342
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=95.00 E-value=0.17 Score=31.94 Aligned_cols=61 Identities=25% Similarity=0.293 Sum_probs=43.0
Q ss_pred CCCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
.+++++|=.|++.|. ++..+++.+. +|+.++.+++.++...+.....+.++.++.+|+.+.
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 93 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQP 93 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH
Confidence 367788888866443 2333444544 999999999888777776666555788889988764
No 343
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.00 E-value=0.099 Score=34.09 Aligned_cols=49 Identities=20% Similarity=0.231 Sum_probs=37.3
Q ss_pred HhcCCCCCCeEEEEcCCC-ChHHHHHHhc-CCCeEEEEeCChhHHHHHHHH
Q 033605 42 NSFGDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASEN 90 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~G~-G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~ 90 (115)
+.....++++||-+|+|. |.++..+++. +..+|+++|.+++.++.+++.
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l 210 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY 210 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh
Confidence 455667888999999863 6666777764 444899999999988888764
No 344
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=94.97 E-value=0.15 Score=31.99 Aligned_cols=59 Identities=15% Similarity=0.157 Sum_probs=41.0
Q ss_pred CCCeEEEEcCCCChHHHH----HHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~----~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
.++++|=.|++.| ++.. +++.+ .+|+.++.+++.++...+.....+.++.++.+|+.+.
T Consensus 3 ~~k~~lVTGas~G-IG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~ 65 (264)
T 3tfo_A 3 MDKVILITGASGG-IGEGIARELGVAG-AKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDR 65 (264)
T ss_dssp TTCEEEESSTTSH-HHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCH
T ss_pred CCCEEEEeCCccH-HHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCH
Confidence 4567777776544 4333 33444 4899999999888877776666555788888888653
No 345
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=94.97 E-value=0.19 Score=29.47 Aligned_cols=45 Identities=13% Similarity=0.091 Sum_probs=34.0
Q ss_pred HHHHHHHHHhcCCCCCCeEEEEcCCCChHHHHHHh-cCCCeEEEEeC
Q 033605 34 SRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATL-LGADQVIAIDI 79 (115)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~~~~-~~~~~v~~vD~ 79 (115)
...++++...... -+.-|||+|-|+|+.--++.+ .+...|+++|-
T Consensus 27 R~~L~~a~~~v~~-~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR 72 (174)
T 3iht_A 27 RACLEHAIAQTAG-LSGPVYELGLGNGRTYHHLRQHVQGREIYVFER 72 (174)
T ss_dssp HHHHHHHHHHTTT-CCSCEEEECCTTCHHHHHHHHHCCSSCEEEEES
T ss_pred HHHHHHHHHHhcC-CCCceEEecCCCChhHHHHHHhCCCCcEEEEEe
Confidence 4455666655443 456899999999999999985 56779999993
No 346
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.92 E-value=0.091 Score=34.27 Aligned_cols=48 Identities=21% Similarity=0.182 Sum_probs=35.6
Q ss_pred HhcCCCCCCeEEEEcCCC-ChHHHHHHhcCCCeEEEEeCChhHHHHHHH
Q 033605 42 NSFGDVSNKVVADFGCGC-GTLGAAATLLGADQVIAIDIDSDSLELASE 89 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~G~-G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~ 89 (115)
......++++||-.|+|. |..+..+++....+|+++|.+++.++.+++
T Consensus 162 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 210 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN 210 (352)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH
Confidence 344566788999999863 556666665434479999999999888875
No 347
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=94.91 E-value=0.14 Score=32.25 Aligned_cols=60 Identities=17% Similarity=0.123 Sum_probs=42.7
Q ss_pred CCCeEEEEcCCCChHHHH----HHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCc
Q 033605 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE 109 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~----~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 109 (115)
+++++|=.|++. .++.. +++.+. +|+.++.++...+...+.....+.++.++.+|+.+..
T Consensus 32 ~gk~~lVTGas~-GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 95 (275)
T 4imr_A 32 RGRTALVTGSSR-GIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAG 95 (275)
T ss_dssp TTCEEEETTCSS-HHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTT
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHH
Confidence 677888777654 44444 334544 9999999988877777766655558889999987653
No 348
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=94.90 E-value=0.013 Score=38.72 Aligned_cols=46 Identities=17% Similarity=0.238 Sum_probs=34.9
Q ss_pred CCCeEEEEcCCCChHHHHHHhc-----------------CCCeEEEEeCChhHHHHHHHHhhc
Q 033605 48 SNKVVADFGCGCGTLGAAATLL-----------------GADQVIAIDIDSDSLELASENAAD 93 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~~-----------------~~~~v~~vD~s~~~~~~a~~~~~~ 93 (115)
+..+|+|+||++|..++.+... +.-.|+..|+.....+.+-+.+..
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~ 113 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPI 113 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTT
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcch
Confidence 4568999999999987665432 124788999999998888777653
No 349
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=94.89 E-value=0.27 Score=31.32 Aligned_cols=61 Identities=28% Similarity=0.312 Sum_probs=40.2
Q ss_pred CCCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCC------------hhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDID------------SDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s------------~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
.+++++|=.|++.|. ++..+++.+ .+|+++|.+ ++.+..........+.++.++.+|+.+.
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 101 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREG-ADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDF 101 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCH
Confidence 366788888876553 233344454 499999987 5555555555555555788889988764
No 350
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.87 E-value=0.11 Score=29.06 Aligned_cols=51 Identities=20% Similarity=0.287 Sum_probs=33.8
Q ss_pred CCeEEEEcCCCChHHHHHHh---cCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccC
Q 033605 49 NKVVADFGCGCGTLGAAATL---LGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRN 107 (115)
Q Consensus 49 ~~~vLDlG~G~G~~~~~~~~---~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~ 107 (115)
..+++=+|+| .++..+++ ....+|+++|.+++.++.++.. .+.++.+|..+
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~------~~~~~~gd~~~ 59 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE------GFDAVIADPTD 59 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT------TCEEEECCTTC
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC------CCcEEECCCCC
Confidence 4578888885 45544442 2234999999999988776642 24667777654
No 351
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.86 E-value=0.094 Score=34.50 Aligned_cols=48 Identities=29% Similarity=0.410 Sum_probs=35.6
Q ss_pred HhcCCCCCCeEEEEcCC-CChHHHHHHhc-CCCeEEEEeCChhHHHHHHH
Q 033605 42 NSFGDVSNKVVADFGCG-CGTLGAAATLL-GADQVIAIDIDSDSLELASE 89 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~G-~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~ 89 (115)
......++++||-+|+| .|..+..+++. +..+|+++|.+++.++.+++
T Consensus 186 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 235 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV 235 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 33455678899999976 35566666654 44489999999999988875
No 352
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.84 E-value=0.067 Score=36.51 Aligned_cols=54 Identities=17% Similarity=0.261 Sum_probs=37.0
Q ss_pred CCCeEEEEcCCCChHHHHHHh---cCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAATL---LGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~---~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
..++|+=+||| ..+..+++ ...-.|+.+|.+++.++.+.... .+..++||+.+.
T Consensus 2 ~~M~iiI~G~G--~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-----~~~~i~Gd~~~~ 58 (461)
T 4g65_A 2 NAMKIIILGAG--QVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-----DLRVVNGHASHP 58 (461)
T ss_dssp CCEEEEEECCS--HHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-----SCEEEESCTTCH
T ss_pred CcCEEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-----CcEEEEEcCCCH
Confidence 34677766665 55555553 22348999999999998877655 467888887654
No 353
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=94.80 E-value=0.31 Score=30.67 Aligned_cols=60 Identities=22% Similarity=0.269 Sum_probs=39.7
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCC----------------hhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDID----------------SDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s----------------~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++.|. ++..+++.+ .+|+.+|.+ ++.++.........+.++.++.+|+.+.
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 88 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEG-ADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY 88 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC-CeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence 66788888876553 233344454 499999987 5555555555555555788888888754
No 354
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=94.79 E-value=0.32 Score=30.55 Aligned_cols=61 Identities=21% Similarity=0.217 Sum_probs=41.1
Q ss_pred CCCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeC-------------ChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDI-------------DSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~-------------s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
.+++++|=.|++.|. ++..+++.+. +|+++|. +++.++...+.....+.++.++.+|+.+.
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 89 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDD 89 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCH
Confidence 367788888876543 2333444544 9999998 56666666666655555788888888653
No 355
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=94.76 E-value=0.27 Score=30.29 Aligned_cols=59 Identities=27% Similarity=0.288 Sum_probs=39.6
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++ |.++..++ +.+ .+|++++.++...+...+.....+.++.++.+|+.+.
T Consensus 12 ~~k~vlItGas-ggiG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~ 74 (260)
T 3awd_A 12 DNRVAIVTGGA-QNIGLACVTALAEAG-ARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNT 74 (260)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCH
Confidence 56678877754 55555544 344 4999999998776655555544444788888888653
No 356
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=94.74 E-value=0.1 Score=34.30 Aligned_cols=48 Identities=29% Similarity=0.428 Sum_probs=35.7
Q ss_pred HhcCCCCCCeEEEEcCC-CChHHHHHHhc-CCCeEEEEeCChhHHHHHHH
Q 033605 42 NSFGDVSNKVVADFGCG-CGTLGAAATLL-GADQVIAIDIDSDSLELASE 89 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~G-~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~ 89 (115)
......++++||-+|+| .|..+..+++. +..+|+++|.+++.++.+++
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 238 (376)
T 1e3i_A 189 NTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA 238 (376)
T ss_dssp TTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 34455678899999976 35566666654 44489999999999988865
No 357
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=94.71 E-value=0.28 Score=30.69 Aligned_cols=59 Identities=20% Similarity=0.306 Sum_probs=40.7
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
.++++|=.|++ |.++..++ +.+ .+|++++.++...+...+.....+.++.++.+|+.+.
T Consensus 30 ~~k~vlITGas-ggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~ 92 (272)
T 1yb1_A 30 TGEIVLITGAG-HGIGRLTAYEFAKLK-SKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNR 92 (272)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCC-CEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCH
Confidence 56678877754 55555554 344 4899999998877766655554455788888988754
No 358
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.70 E-value=0.095 Score=34.39 Aligned_cols=49 Identities=16% Similarity=0.075 Sum_probs=36.8
Q ss_pred HhcCCCCCCeEEEEcCCC-ChHHHHHHhcCCCeEEEEeCChhHHHHHHHH
Q 033605 42 NSFGDVSNKVVADFGCGC-GTLGAAATLLGADQVIAIDIDSDSLELASEN 90 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~G~-G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~ 90 (115)
+.....++++||-+|+|. |..+..+++....+|+++|.+++.++.+++.
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l 232 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFAL 232 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHc
Confidence 344556788999999773 6666667764445999999999998887764
No 359
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=94.65 E-value=0.11 Score=34.11 Aligned_cols=48 Identities=27% Similarity=0.336 Sum_probs=35.4
Q ss_pred HhcCCCCCCeEEEEcCCC-ChHHHHHHhc-CCCeEEEEeCChhHHHHHHH
Q 033605 42 NSFGDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASE 89 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~G~-G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~ 89 (115)
......++++||-+|+|. |..+..+++. +..+|+++|.+++.++.+++
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 234 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE 234 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 334556788999999763 5566666654 44489999999999988865
No 360
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=94.64 E-value=0.32 Score=30.01 Aligned_cols=59 Identities=15% Similarity=0.211 Sum_probs=39.8
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
.++++|=.|++ |.++..++ +.+ .+|+.++.+++.++...+.....+.++.++.+|+.+.
T Consensus 6 ~~k~~lVTGas-~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~ 68 (247)
T 2jah_A 6 QGKVALITGAS-SGIGEATARALAAEG-AAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADR 68 (247)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCH
Confidence 45678878765 44444443 444 4899999998877766655544444788888888653
No 361
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=94.64 E-value=0.31 Score=30.30 Aligned_cols=59 Identities=22% Similarity=0.379 Sum_probs=39.8
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++. .++..++ +.+ .+|+.++.+++.++...+.....+.++.++.+|+.+.
T Consensus 6 ~~k~vlVTGas~-gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 68 (262)
T 1zem_A 6 NGKVCLVTGAGG-NIGLATALRLAEEG-TAIALLDMNREALEKAEASVREKGVEARSYVCDVTSE 68 (262)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH
Confidence 566788777654 4444443 444 4899999998877766655554454788888888653
No 362
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=94.61 E-value=0.29 Score=30.74 Aligned_cols=60 Identities=25% Similarity=0.228 Sum_probs=39.5
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCC------------hhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDID------------SDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s------------~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++.|. ++..+++.+ .+|+.+|.+ ...++.+.......+.++.++.+|+.+.
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 83 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEG-ADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDR 83 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC-CeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCH
Confidence 56788888876543 233344454 489999987 5555555555555555788889888764
No 363
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=94.61 E-value=0.24 Score=31.31 Aligned_cols=59 Identities=17% Similarity=0.110 Sum_probs=41.2
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~ 108 (115)
+++++|=.|++ |.++..++ +.+ .+|++++-++...+.+.+.....+. ++.++.+|+.+.
T Consensus 11 ~~k~vlITGas-~GIG~~~a~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~ 74 (311)
T 3o26_A 11 KRRCAVVTGGN-KGIGFEICKQLSSNG-IMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDP 74 (311)
T ss_dssp -CCEEEESSCS-SHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSC
T ss_pred CCcEEEEecCC-chHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCc
Confidence 56678877765 44444443 444 4999999999887777666655443 789999998775
No 364
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.60 E-value=0.14 Score=33.46 Aligned_cols=49 Identities=27% Similarity=0.281 Sum_probs=37.4
Q ss_pred HhcCCCCCCeEEEEcCCC-ChHHHHHHhc-CCCeEEEEeCChhHHHHHHHH
Q 033605 42 NSFGDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASEN 90 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~G~-G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~ 90 (115)
......++++||=.|+|. |.++..+++. +...|+++|.+++.++.+++.
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 445667888999999863 6666677754 454599999999999998876
No 365
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=94.58 E-value=0.31 Score=30.49 Aligned_cols=61 Identities=23% Similarity=0.282 Sum_probs=39.5
Q ss_pred CCCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCC------------hhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDID------------SDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s------------~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
.+++++|=.|++.|. ++..+++.+ .+|+.+|.+ ++.++...+.....+.++.++.+|+.+.
T Consensus 11 l~gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 86 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGRAHAVRLAADG-ADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDR 86 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence 366788888865443 233344454 489999987 5555555555544455788999998754
No 366
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.58 E-value=0.086 Score=34.66 Aligned_cols=48 Identities=25% Similarity=0.328 Sum_probs=35.9
Q ss_pred HhcCCCCCCeEEEEcCC-CChHHHHHHh-cCCCeEEEEeCChhHHHHHHH
Q 033605 42 NSFGDVSNKVVADFGCG-CGTLGAAATL-LGADQVIAIDIDSDSLELASE 89 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~G-~G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~ 89 (115)
......++++||-+|+| .|..+..+++ .+..+|+++|.+++.++.+++
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 234 (373)
T 1p0f_A 185 NTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE 234 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence 34455678899999976 3556666665 455589999999999988875
No 367
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=94.54 E-value=0.33 Score=30.41 Aligned_cols=59 Identities=19% Similarity=0.201 Sum_probs=39.7
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++ |.++..++ +.+ .+|+.++.+++.++...+.....+.++.++.+|+.+.
T Consensus 20 ~~k~vlVTGas-~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 82 (273)
T 1ae1_A 20 KGTTALVTGGS-KGIGYAIVEELAGLG-ARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSR 82 (273)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred CCCEEEEECCc-chHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCH
Confidence 56788888765 44444443 444 4899999998877666555544455788888887653
No 368
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=94.50 E-value=0.33 Score=30.49 Aligned_cols=59 Identities=17% Similarity=0.267 Sum_probs=39.4
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++ |.++..++ +.+ .+|++++.++...+...+.....+.++.++.+|+.+.
T Consensus 21 ~~k~vlVTGas-~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~ 83 (277)
T 2rhc_B 21 DSEVALVTGAT-SGIGLEIARRLGKEG-LRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 83 (277)
T ss_dssp TSCEEEEETCS-SHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCH
Confidence 55678877765 44444443 444 4899999998877665555544444788888887653
No 369
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=94.50 E-value=0.13 Score=32.52 Aligned_cols=60 Identities=15% Similarity=0.152 Sum_probs=41.5
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++.|. ++..+++.+. +|+.++.++..++.........+.++.++.+|+.+.
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 69 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDE 69 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCH
Confidence 56788877766443 2333444544 899999999888777776655555788888887654
No 370
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=94.49 E-value=0.37 Score=30.27 Aligned_cols=60 Identities=25% Similarity=0.327 Sum_probs=41.4
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC---ceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLEL---DIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~v~~~~~d~~~~ 108 (115)
+++++|=.|++.|. ++..+++.+. +|+.+|.+++..+...+.....+. ++.++.+|+.+.
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~ 75 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNE 75 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCH
Confidence 56788888865443 2333444544 899999999888777766655443 688888988764
No 371
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.48 E-value=0.065 Score=34.78 Aligned_cols=49 Identities=20% Similarity=0.178 Sum_probs=37.5
Q ss_pred HhcCCCCCCeEEEEcCC--CChHHHHHHhcCCCeEEEEeCChhHHHHHHHH
Q 033605 42 NSFGDVSNKVVADFGCG--CGTLGAAATLLGADQVIAIDIDSDSLELASEN 90 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~G--~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~ 90 (115)
+.....++++||-.|+| .|..+..+++...++|+++|.+++.++.+++.
T Consensus 138 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l 188 (340)
T 3gms_A 138 ETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRL 188 (340)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH
T ss_pred HhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhC
Confidence 44556678999999987 56677777753344999999999998888764
No 372
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=94.44 E-value=0.39 Score=30.26 Aligned_cols=62 Identities=18% Similarity=0.261 Sum_probs=40.8
Q ss_pred CCCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeC-ChhHHHHHHHHhhccCCceeEEEccccCCc
Q 033605 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDI-DSDSLELASENAADLELDIDFVQCDIRNLE 109 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~-s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 109 (115)
..++++|=.|++.|. ++..+++.+. +|+.++. +++..+.........+.++.++.+|+.+..
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~ 92 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLS 92 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGG
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHH
Confidence 356778888765543 2333444444 8999996 666666665555555558899999987654
No 373
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.42 E-value=0.064 Score=35.36 Aligned_cols=48 Identities=38% Similarity=0.434 Sum_probs=36.5
Q ss_pred HhcCCCCCCeEEEEcCC-CChHHHHHHh-cCCCeEEEEeCChhHHHHHHH
Q 033605 42 NSFGDVSNKVVADFGCG-CGTLGAAATL-LGADQVIAIDIDSDSLELASE 89 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~G-~G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~ 89 (115)
......++++||-+|+| .|.++..+++ .+..+|+++|.+++.++.+++
T Consensus 187 ~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~ 236 (378)
T 3uko_A 187 NTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK 236 (378)
T ss_dssp TTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 44455678899999986 4666666775 455589999999999988765
No 374
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=94.39 E-value=0.34 Score=30.04 Aligned_cols=59 Identities=14% Similarity=0.157 Sum_probs=39.3
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++ |.++..++ +.+ .+|++++.+++..+...+.....+.++.++.+|+.+.
T Consensus 8 ~~k~vlVTGas-~giG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 70 (260)
T 2ae2_A 8 EGCTALVTGGS-RGIGYGIVEELASLG-ASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSR 70 (260)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH
Confidence 56678877754 44444443 444 4899999998877665555544444788888888653
No 375
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=94.36 E-value=0.28 Score=30.60 Aligned_cols=60 Identities=22% Similarity=0.294 Sum_probs=41.3
Q ss_pred CCCeEEEEcCCCChHHHH----HHhcCCCeEEEEeCChhHHHHHHHHhhc-cCCceeEEEccccCCc
Q 033605 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSDSLELASENAAD-LELDIDFVQCDIRNLE 109 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~----~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~v~~~~~d~~~~~ 109 (115)
+++++|=.|++.| ++.. +++.+. +|+.++.++..++.+.+.... .+.++.++.+|+.+..
T Consensus 19 ~~k~vlVTGas~g-IG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~ 83 (266)
T 4egf_A 19 DGKRALITGATKG-IGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPD 83 (266)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTT
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHH
Confidence 5677887776544 4433 334444 899999998888776665544 3447899999987654
No 376
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=94.35 E-value=0.42 Score=30.78 Aligned_cols=60 Identities=22% Similarity=0.168 Sum_probs=41.9
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC--ceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~ 108 (115)
.++++|=.|++.|. ++..+++.+. +|++++.++..++.+.+.....+. ++.++.+|+.+.
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~ 71 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASR 71 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCH
Confidence 56788888876554 2333444544 899999999888777766655444 688888888653
No 377
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.35 E-value=0.12 Score=33.89 Aligned_cols=48 Identities=23% Similarity=0.169 Sum_probs=35.7
Q ss_pred hcCCCCCCeEEEEcCC-CChHHHHHHhcCCCeEEEEeCChhHHHHHHHH
Q 033605 43 SFGDVSNKVVADFGCG-CGTLGAAATLLGADQVIAIDIDSDSLELASEN 90 (115)
Q Consensus 43 ~~~~~~~~~vLDlG~G-~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~ 90 (115)
.....++++||-+|+| .|..+..+++....+|+++|.+++.++.+++.
T Consensus 174 ~~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~l 222 (360)
T 1piw_A 174 RNGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKM 222 (360)
T ss_dssp HTTCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc
Confidence 3456678899999985 35566666653334899999999999888763
No 378
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=94.34 E-value=0.31 Score=30.33 Aligned_cols=59 Identities=17% Similarity=0.178 Sum_probs=41.5
Q ss_pred CCCeEEEEcCCCChHHHHH----HhcCCCeEEEEeCChhHHHHHHHHhhccC-CceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADLE-LDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~----~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~v~~~~~d~~~~ 108 (115)
+++++|=.|++ |.++..+ ++.+. +|+.++.+++.++.+.......+ .++.++.+|+.+.
T Consensus 9 ~~k~vlVTGas-~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~ 72 (262)
T 3pk0_A 9 QGRSVVVTGGT-KGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDR 72 (262)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCH
Confidence 56778877755 4444444 34444 99999999988877777666555 3788999998764
No 379
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.34 E-value=0.054 Score=32.23 Aligned_cols=45 Identities=13% Similarity=0.102 Sum_probs=32.2
Q ss_pred cCCCCCCeEEEEcC--CCChHHHHHHh-cCCCeEEEEeCChhHHHHHHH
Q 033605 44 FGDVSNKVVADFGC--GCGTLGAAATL-LGADQVIAIDIDSDSLELASE 89 (115)
Q Consensus 44 ~~~~~~~~vLDlG~--G~G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~ 89 (115)
....++++||..|+ |.|.....++. .+ .+|+++|.+++..+.+++
T Consensus 34 ~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~~~~~~~~~ 81 (198)
T 1pqw_A 34 GRLSPGERVLIHSATGGVGMAAVSIAKMIG-ARIYTTAGSDAKREMLSR 81 (198)
T ss_dssp SCCCTTCEEEETTTTSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHT
T ss_pred hCCCCCCEEEEeeCCChHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHH
Confidence 34567889999994 45666666554 44 499999999988776643
No 380
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=94.32 E-value=0.26 Score=30.91 Aligned_cols=59 Identities=17% Similarity=0.112 Sum_probs=40.7
Q ss_pred CCCeEEEEcCCCChHHHH----HHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~----~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++. .++.. +++.+. +|++++.++...+.........+.++.++.+|+.+.
T Consensus 27 ~~k~~lVTGas~-GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~ 89 (270)
T 3ftp_A 27 DKQVAIVTGASR-GIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDA 89 (270)
T ss_dssp TTCEEEETTCSS-HHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCH
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCH
Confidence 566788777554 44444 344544 999999999888777666665555778888887653
No 381
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=94.31 E-value=0.14 Score=33.27 Aligned_cols=48 Identities=25% Similarity=0.188 Sum_probs=35.1
Q ss_pred HhcCCCCCCeEEEEcC--CCChHHHHHHhcCCCeEEEEeCChhHHHHHHH
Q 033605 42 NSFGDVSNKVVADFGC--GCGTLGAAATLLGADQVIAIDIDSDSLELASE 89 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~--G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~ 89 (115)
......++++||-.|+ |.|.....+++....+|+++|.+++..+.+++
T Consensus 163 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~ 212 (347)
T 2hcy_A 163 KSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS 212 (347)
T ss_dssp HTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH
Confidence 3335567889999998 36666666665334599999999988877765
No 382
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=94.23 E-value=0.49 Score=29.65 Aligned_cols=60 Identities=23% Similarity=0.266 Sum_probs=39.4
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeC-------------ChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDI-------------DSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~-------------s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++.|. ++..+++.+. +|+.+|. ++..++...+.....+.++.++.+|+.+.
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 85 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDF 85 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence 66788888866543 2333445544 9999998 56666555555555555788888888764
No 383
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=94.22 E-value=0.27 Score=31.90 Aligned_cols=46 Identities=33% Similarity=0.426 Sum_probs=35.1
Q ss_pred cCCCCCCeEEEEcCC-CChHHHHHHhcCCCeEEEEeCChhHHHHHHH
Q 033605 44 FGDVSNKVVADFGCG-CGTLGAAATLLGADQVIAIDIDSDSLELASE 89 (115)
Q Consensus 44 ~~~~~~~~vLDlG~G-~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~ 89 (115)
....++++||-+|+| .|.....+++....+|+++|.++..++.+++
T Consensus 160 ~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 206 (339)
T 1rjw_A 160 TGAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE 206 (339)
T ss_dssp HTCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 355678899999986 4666666665434599999999999888765
No 384
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=94.21 E-value=0.12 Score=33.87 Aligned_cols=49 Identities=31% Similarity=0.374 Sum_probs=35.9
Q ss_pred HhcCCCCCCeEEEEcCC-CChHHHHHHh-cCCCeEEEEeCChhHHHHHHHH
Q 033605 42 NSFGDVSNKVVADFGCG-CGTLGAAATL-LGADQVIAIDIDSDSLELASEN 90 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~G-~G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~~ 90 (115)
......++++||-+|+| .|.++..+++ .+..+|+++|.+++.++.+++.
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l 234 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF 234 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc
Confidence 33455678899999976 3556666665 4545899999999999888754
No 385
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.20 E-value=0.13 Score=33.24 Aligned_cols=48 Identities=10% Similarity=0.113 Sum_probs=34.8
Q ss_pred HhcCCCCCCeEEEEcC--CCChHHHHHHhcCCCeEEEEeCChhHHHHHHH
Q 033605 42 NSFGDVSNKVVADFGC--GCGTLGAAATLLGADQVIAIDIDSDSLELASE 89 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~--G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~ 89 (115)
+.....++++||-.|+ |.|.....++.....+|+++|.+++.++.+++
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~ 188 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ 188 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 3445567889999997 46666666665334499999999988887743
No 386
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=94.14 E-value=0.39 Score=30.49 Aligned_cols=59 Identities=15% Similarity=0.226 Sum_probs=39.5
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++ |.++..++ +.+ .+|++++.++...+...+.....+.++.++.+|+.+.
T Consensus 33 ~~k~vlVTGas-~gIG~aia~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~ 95 (291)
T 3cxt_A 33 KGKIALVTGAS-YGIGFAIASAYAKAG-ATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDE 95 (291)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecCCCH
Confidence 56788877765 44444444 444 4899999998877665555544444678888888653
No 387
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=94.13 E-value=0.4 Score=30.82 Aligned_cols=61 Identities=25% Similarity=0.274 Sum_probs=38.9
Q ss_pred CCCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCC------------hhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDID------------SDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s------------~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
.+++++|=.|++.|. ++..+++.+. +|+++|.+ ++.++.........+.++.++.+|+.+.
T Consensus 44 l~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~ 119 (317)
T 3oec_A 44 LQGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDL 119 (317)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence 366788877766543 2333444544 99999886 5555555555545555788888888653
No 388
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=94.13 E-value=0.39 Score=29.90 Aligned_cols=59 Identities=22% Similarity=0.364 Sum_probs=39.0
Q ss_pred CCCeEEEEcCCCChHHHHH----HhcCCCeEEEEeCChhHHHHHHHHhhcc--CCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADL--ELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~----~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++ |.++..+ ++.+ .+|+.++.+++..+...+..... +.++.++.+|+.+.
T Consensus 12 ~~k~vlVTGas-~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 76 (267)
T 1iy8_A 12 TDRVVLITGGG-SGLGRATAVRLAAEG-AKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDE 76 (267)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCH
Confidence 56788878765 4444444 3444 49999999988776655544333 33788888888654
No 389
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=94.12 E-value=0.16 Score=31.97 Aligned_cols=59 Identities=17% Similarity=0.253 Sum_probs=41.6
Q ss_pred CCCeEEEEcCCCChHHHH----HHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~----~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++. .++.. +++.+. +|+.++.++...+...+.....+.++.++.+|+.+.
T Consensus 25 ~gk~~lVTGas~-gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~ 87 (271)
T 4ibo_A 25 GGRTALVTGSSR-GLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSE 87 (271)
T ss_dssp TTCEEEETTCSS-HHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCH
Confidence 677888777554 44444 344444 999999999888777776665555788888888654
No 390
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.12 E-value=0.18 Score=33.24 Aligned_cols=49 Identities=31% Similarity=0.300 Sum_probs=37.1
Q ss_pred HhcCCCCCCeEEEEcCCC-ChHHHHHHhc-CCCeEEEEeCChhHHHHHHHH
Q 033605 42 NSFGDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASEN 90 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~G~-G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~ 90 (115)
......++++||-.|+|. |.++..+++. +..+|+++|.+++..+.+++.
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 226 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV 226 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc
Confidence 444666888999999863 5566666654 445999999999999888764
No 391
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=94.11 E-value=0.27 Score=30.51 Aligned_cols=59 Identities=20% Similarity=0.232 Sum_probs=38.7
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++ |.++..++ +.+ .+|+.++.++...+...+.....+.++.++.+|+.+.
T Consensus 4 ~~k~vlVTGas-~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 66 (260)
T 2qq5_A 4 NGQVCVVTGAS-RGIGRGIALQLCKAG-ATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQE 66 (260)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCH
Confidence 45677777754 44554444 444 4899999998877666555544444678888888653
No 392
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=94.08 E-value=0.29 Score=31.15 Aligned_cols=59 Identities=19% Similarity=0.153 Sum_probs=41.6
Q ss_pred CCCeEEEEcCCCChHHHH----HHhcCCCeEEEEeCChhHHHHHHHHhhccC-CceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSDSLELASENAADLE-LDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~----~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~v~~~~~d~~~~ 108 (115)
+++++|=.|++. .++.. +++.+. +|+.++.++..++...+.....+ .++.++.+|+.+.
T Consensus 40 ~~k~vlVTGas~-GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~ 103 (293)
T 3rih_A 40 SARSVLVTGGTK-GIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDP 103 (293)
T ss_dssp TTCEEEETTTTS-HHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCH
Confidence 566788777654 44444 344544 99999999988877777666655 3788899998764
No 393
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.04 E-value=0.15 Score=33.18 Aligned_cols=45 Identities=16% Similarity=0.032 Sum_probs=34.2
Q ss_pred CCCCCCeEEEEcCC-CChHHHHHHhcC--CCeEEEEeCChhHHHHHHHH
Q 033605 45 GDVSNKVVADFGCG-CGTLGAAATLLG--ADQVIAIDIDSDSLELASEN 90 (115)
Q Consensus 45 ~~~~~~~vLDlG~G-~G~~~~~~~~~~--~~~v~~vD~s~~~~~~a~~~ 90 (115)
.. ++++||-+|+| .|..+..+++.. ..+|+++|.+++.++.+++.
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l 215 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL 215 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh
Confidence 55 78899999986 355666666533 45899999999998888763
No 394
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.01 E-value=0.1 Score=35.11 Aligned_cols=53 Identities=19% Similarity=0.265 Sum_probs=34.9
Q ss_pred CCCeEEEEcCCCChHHHHHH---hcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT---LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~---~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
...+|+=+|+| .++..++ ......|+++|.+++.++.++.. .+.++.||+.+.
T Consensus 3 ~~~~viIiG~G--r~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~------g~~vi~GDat~~ 58 (413)
T 3l9w_A 3 HGMRVIIAGFG--RFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF------GMKVFYGDATRM 58 (413)
T ss_dssp -CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT------TCCCEESCTTCH
T ss_pred CCCeEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC------CCeEEEcCCCCH
Confidence 34578877775 4444443 22345999999999999887642 245677887653
No 395
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=93.95 E-value=0.56 Score=29.20 Aligned_cols=60 Identities=20% Similarity=0.147 Sum_probs=41.1
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhc-cCC-ceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAAD-LEL-DIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~-~v~~~~~d~~~~ 108 (115)
+++++|=.|++.|. ++..+++.+. +|+.++.+++.++.+.+.... .+. ++.++.+|+.+.
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~ 71 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDA 71 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCH
Confidence 56788888876553 2333444544 899999999888777666554 333 588888988764
No 396
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=93.93 E-value=0.2 Score=32.62 Aligned_cols=49 Identities=18% Similarity=0.276 Sum_probs=35.3
Q ss_pred HhcCCCCCCeEEEEcCC--CChHHHHHHhcC-CCeEEEEeCChhHHHHHHHH
Q 033605 42 NSFGDVSNKVVADFGCG--CGTLGAAATLLG-ADQVIAIDIDSDSLELASEN 90 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~G--~G~~~~~~~~~~-~~~v~~vD~s~~~~~~a~~~ 90 (115)
......++++||-.|+| .|.....+++.. ..+|+++|.+++.++.+++.
T Consensus 164 ~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~ 215 (347)
T 1jvb_A 164 RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA 215 (347)
T ss_dssp HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh
Confidence 33455678899999987 444555666432 44899999999988887653
No 397
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=93.93 E-value=0.17 Score=32.81 Aligned_cols=46 Identities=33% Similarity=0.404 Sum_probs=35.9
Q ss_pred CCCCCCeEEEEcCCC-ChHHHHHHh-cCCCeEEEEeCChhHHHHHHHH
Q 033605 45 GDVSNKVVADFGCGC-GTLGAAATL-LGADQVIAIDIDSDSLELASEN 90 (115)
Q Consensus 45 ~~~~~~~vLDlG~G~-G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~~ 90 (115)
...++++||-.|+|. |..+..+++ .+..+|+++|.+++.++.+++.
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l 215 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV 215 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc
Confidence 455788999999863 666677775 4467999999999999888764
No 398
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=93.92 E-value=0.24 Score=32.74 Aligned_cols=48 Identities=27% Similarity=0.380 Sum_probs=35.8
Q ss_pred HhcC-CCCCCeEEEEcCC-CChHHHHHHhcCC-CeEEEEeCChhHHHHHHH
Q 033605 42 NSFG-DVSNKVVADFGCG-CGTLGAAATLLGA-DQVIAIDIDSDSLELASE 89 (115)
Q Consensus 42 ~~~~-~~~~~~vLDlG~G-~G~~~~~~~~~~~-~~v~~vD~s~~~~~~a~~ 89 (115)
.... ..++++||-.|+| .|..+..+++... .+|++++.+++.++.+++
T Consensus 188 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~ 238 (380)
T 1vj0_A 188 DEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE 238 (380)
T ss_dssp HTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH
T ss_pred HhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH
Confidence 3445 5678899999966 4556666775434 599999999999888875
No 399
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=93.89 E-value=0.51 Score=28.65 Aligned_cols=58 Identities=17% Similarity=0.164 Sum_probs=38.5
Q ss_pred CCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhh-ccCCceeEEEccccCC
Q 033605 49 NKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAA-DLELDIDFVQCDIRNL 108 (115)
Q Consensus 49 ~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~v~~~~~d~~~~ 108 (115)
++++|=.|++ |.++..++ +.+ .+|+.++-+++.++...+... ..+.++.++.+|+.+.
T Consensus 2 ~k~vlITGas-~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 64 (235)
T 3l77_A 2 MKVAVITGAS-RGIGEAIARALARDG-YALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKA 64 (235)
T ss_dssp CCEEEEESCS-SHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCH
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCH
Confidence 3567767754 44444444 444 489999999887776665544 3445788899988764
No 400
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=93.87 E-value=0.48 Score=29.36 Aligned_cols=59 Identities=20% Similarity=0.242 Sum_probs=38.1
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhcc-CCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADL-ELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++ |.++..++ +.+ .+|++++.++...+...+..... +.++.++.+|+.+.
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~ 69 (263)
T 3ai3_A 6 SGKVAVITGSS-SGIGLAIAEGFAKEG-AHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATP 69 (263)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCH
Confidence 45678877755 44444443 444 49999999987766555444332 44688888888653
No 401
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=93.78 E-value=0.48 Score=29.42 Aligned_cols=60 Identities=17% Similarity=0.187 Sum_probs=39.5
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhcCCCeEEEE-eCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAI-DIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~v-D~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++.|. ++..+++.+. +|+.+ +.++...+.........+.++.++.+|+.+.
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 70 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNA 70 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCH
Confidence 66788888876553 2333444544 88887 6777766666665555555788888888654
No 402
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=93.75 E-value=0.57 Score=29.74 Aligned_cols=58 Identities=22% Similarity=0.176 Sum_probs=40.7
Q ss_pred CCCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
.+++++|=-|++.|. .+..+++.+. +|+.+|.+++.++.+.+.. +.++..+++|+.+.
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~ 87 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEI---GGGAVGIQADSANL 87 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---CTTCEEEECCTTCH
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHc---CCCeEEEEecCCCH
Confidence 478888988877664 3344445555 9999999998877665443 33677888887654
No 403
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=93.74 E-value=0.57 Score=29.38 Aligned_cols=61 Identities=16% Similarity=0.090 Sum_probs=38.7
Q ss_pred CCCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCC------------hhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDID------------SDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s------------~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
.+++++|=.|++.|. ++..+++.+. +|+.+|.+ ...+..........+.++.++.+|+.+.
T Consensus 8 l~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 83 (281)
T 3s55_A 8 FEGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDR 83 (281)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence 366788888866543 2333444544 89999986 4445554444444555788888888664
No 404
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.72 E-value=0.13 Score=33.33 Aligned_cols=47 Identities=13% Similarity=0.133 Sum_probs=35.7
Q ss_pred HhcCCCCCCeEEEEcC--CCChHHHHHHhcCCCeEEEEeCChhHHHHHH
Q 033605 42 NSFGDVSNKVVADFGC--GCGTLGAAATLLGADQVIAIDIDSDSLELAS 88 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~--G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~ 88 (115)
+.....++++||-.|+ |.|..+..+++....+|++++.+++.++.+.
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~ 191 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLV 191 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 4445668889999998 4666777777544459999999998888773
No 405
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=93.62 E-value=0.11 Score=33.38 Aligned_cols=48 Identities=19% Similarity=0.058 Sum_probs=36.6
Q ss_pred HhcCCCCCCeEEEEcCC-CChHHHHHHhcCCCeEEEEeCChhHHHHHHHH
Q 033605 42 NSFGDVSNKVVADFGCG-CGTLGAAATLLGADQVIAIDIDSDSLELASEN 90 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~G-~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~ 90 (115)
......++++||=.|+| .|..+..+++....+|++++ +++..+.+++.
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~l 184 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKR 184 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHc
Confidence 45566688999999995 46667777754334999999 99999988764
No 406
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=93.62 E-value=0.52 Score=29.17 Aligned_cols=58 Identities=16% Similarity=0.206 Sum_probs=38.0
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRN 107 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~ 107 (115)
+++++|=.|++ |.++..++ +.+ .+|++++.+++.++...+.....+.++.++.+|+.+
T Consensus 13 ~~k~vlVTGas-~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~ 74 (260)
T 2zat_A 13 ENKVALVTAST-DGIGLAIARRLAQDG-AHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGK 74 (260)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC
Confidence 56677777654 55554444 444 499999999877766555544444467788888765
No 407
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=93.61 E-value=0.47 Score=29.62 Aligned_cols=60 Identities=15% Similarity=0.179 Sum_probs=39.2
Q ss_pred CCCCeEEEEcCCCChHHHHH----HhcCCCeEEEEeC-ChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGTLGAAA----TLLGADQVIAIDI-DSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~----~~~~~~~v~~vD~-s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
.+++++|=.|++.| ++..+ ++.+. +|+.++- ++...+...+.....+.++.++.+|+.+.
T Consensus 27 l~~k~vlITGas~g-IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 91 (271)
T 4iin_A 27 FTGKNVLITGASKG-IGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASE 91 (271)
T ss_dssp CSCCEEEETTCSSH-HHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred cCCCEEEEECCCcH-HHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCH
Confidence 35678887776544 44443 34444 8999988 55555655555555555788899988654
No 408
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=93.61 E-value=0.23 Score=32.35 Aligned_cols=47 Identities=15% Similarity=0.128 Sum_probs=28.9
Q ss_pred HHHHHHHH-hcCCCCCCeEEEEcC------CCChHHHHHHhcCC--CeEEEEeCChhH
Q 033605 35 RMLYTAEN-SFGDVSNKVVADFGC------GCGTLGAAATLLGA--DQVIAIDIDSDS 83 (115)
Q Consensus 35 ~~~~~~~~-~~~~~~~~~vLDlG~------G~G~~~~~~~~~~~--~~v~~vD~s~~~ 83 (115)
++.+.+-. ....+.+++|||+|+ -.|.. .+.+... +.|+++|+.+-.
T Consensus 95 qlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~ 150 (344)
T 3r24_A 95 QLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFV 150 (344)
T ss_dssp HHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCB
T ss_pred HHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcccc
Confidence 44554422 223456889999996 55653 2333322 499999999853
No 409
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=93.59 E-value=0.48 Score=29.72 Aligned_cols=59 Identities=22% Similarity=0.241 Sum_probs=39.0
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhccCC---ceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLEL---DIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~v~~~~~d~~~~ 108 (115)
+++++|=.|++ |.++..++ +.+ .+|++++.+++.++...+.....+. ++.++.+|+.+.
T Consensus 5 ~~k~vlVTGas-~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 70 (280)
T 1xkq_A 5 SNKTVIITGSS-NGIGRTTAILFAQEG-ANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTE 70 (280)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCH
Confidence 55677777754 44444444 444 4999999998877766555544443 678888888753
No 410
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=93.58 E-value=0.55 Score=29.74 Aligned_cols=60 Identities=18% Similarity=0.078 Sum_probs=40.5
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEe-CChhHHHHHHHHhh-ccCCceeEEEccccCCc
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAID-IDSDSLELASENAA-DLELDIDFVQCDIRNLE 109 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD-~s~~~~~~a~~~~~-~~~~~v~~~~~d~~~~~ 109 (115)
+++++|=.|++ |.++..++ +.+ .+|+.++ .+++.++.+.+... ..+.++.++.+|+.+..
T Consensus 8 ~~k~~lVTGas-~GIG~aia~~la~~G-~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 8 TVPVALVTGAA-KRLGRSIAEGLHAEG-YAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVA 73 (291)
T ss_dssp CCCEEEETTCS-SHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSC
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCC-CeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcc
Confidence 55677777655 44554444 444 4999999 88877766655554 33447889999987754
No 411
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=93.57 E-value=0.64 Score=28.70 Aligned_cols=57 Identities=19% Similarity=0.173 Sum_probs=36.7
Q ss_pred CeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 50 KVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 50 ~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++|=.|++ |.++..++ +.+ .+|++++.++...+...+.....+.++.++.+|+.+.
T Consensus 3 k~vlVTGas-~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 63 (256)
T 1geg_A 3 KVALVTGAG-QGIGKAIALRLVKDG-FAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 63 (256)
T ss_dssp CEEEEETTT-SHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSH
T ss_pred CEEEEECCC-ChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH
Confidence 466666654 44444444 444 4899999998777665555544444678888887653
No 412
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=93.57 E-value=0.52 Score=29.28 Aligned_cols=59 Identities=17% Similarity=0.187 Sum_probs=39.1
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEE-eCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAI-DIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~v-D~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++ |.++..++ +.+. +|+.+ +.++...+...+.....+.++.++.+|+.+.
T Consensus 3 ~~k~vlVTGas-~gIG~aia~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 66 (258)
T 3oid_A 3 QNKCALVTGSS-RGVGKAAAIRLAENGY-NIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQP 66 (258)
T ss_dssp CCCEEEESSCS-SHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred CCCEEEEecCC-chHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH
Confidence 45677766655 44444443 4444 78776 7888777776666665555788899988764
No 413
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=93.57 E-value=0.46 Score=29.09 Aligned_cols=59 Identities=20% Similarity=0.281 Sum_probs=39.3
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.| |+|.++..++ +.+ .+|++++.++...+...+.....+.++.++.+|+.+.
T Consensus 10 ~~~~vlVtG-asggiG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 72 (255)
T 1fmc_A 10 DGKCAIITG-AGAGIGKEIAITFATAG-ASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSE 72 (255)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHTTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCH
Confidence 556777666 4566665555 334 4899999998777665555544444778888887653
No 414
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=93.56 E-value=0.3 Score=32.00 Aligned_cols=46 Identities=15% Similarity=0.058 Sum_probs=35.7
Q ss_pred cCCCCCCeEEEEc--CCCChHHHHHHhcCCCeEEEEeCChhHHHHHHH
Q 033605 44 FGDVSNKVVADFG--CGCGTLGAAATLLGADQVIAIDIDSDSLELASE 89 (115)
Q Consensus 44 ~~~~~~~~vLDlG--~G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~ 89 (115)
....++++||-.| .|.|.....+++....+|++++.+++.++.+++
T Consensus 159 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~ 206 (362)
T 2c0c_A 159 GGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS 206 (362)
T ss_dssp TCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence 3456788999999 457777887776434499999999988888765
No 415
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=93.55 E-value=0.56 Score=29.35 Aligned_cols=59 Identities=15% Similarity=0.138 Sum_probs=39.1
Q ss_pred CCCeEEEEcCCCChHHHHH----HhcCCCeEEEEeC-ChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAIDI-DSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~----~~~~~~~v~~vD~-s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++. .++..+ ++.+. +|+.++. ++...+...+.....+.++.++.+|+.+.
T Consensus 27 ~~k~vlVTGas~-gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~ 90 (269)
T 4dmm_A 27 TDRIALVTGASR-GIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQE 90 (269)
T ss_dssp TTCEEEETTCSS-HHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSH
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCH
Confidence 567788777654 444443 34444 8988887 66666666665555555788889988764
No 416
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=93.50 E-value=0.53 Score=29.06 Aligned_cols=60 Identities=25% Similarity=0.200 Sum_probs=39.7
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.| |+|.++..++ +....+|++++-++...+...+.+...+.++.++.+|+.+.
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~ 66 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL 66 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCH
Confidence 456777666 5566665554 31244999999988777666655554444788888888753
No 417
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=93.49 E-value=0.22 Score=32.37 Aligned_cols=45 Identities=22% Similarity=0.151 Sum_probs=35.3
Q ss_pred CCCCCCeEEEEcC--CCChHHHHHHhcCCCeEEEEeCChhHHHHHHH
Q 033605 45 GDVSNKVVADFGC--GCGTLGAAATLLGADQVIAIDIDSDSLELASE 89 (115)
Q Consensus 45 ~~~~~~~vLDlG~--G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~ 89 (115)
...++++||-.|+ |.|.....+++....+|++++.+++.++.+++
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~ 209 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA 209 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 4557889999998 56777777775434599999999998888765
No 418
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=93.49 E-value=0.55 Score=29.41 Aligned_cols=56 Identities=18% Similarity=0.229 Sum_probs=38.4
Q ss_pred CCCeEEEEcCCCChHHHH----HHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~----~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++.| ++.. +++.+. +|+.++.++..++...+.. +.++.++.+|+.+.
T Consensus 29 ~~k~vlVTGas~G-IG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~ 88 (281)
T 3ppi_A 29 EGASAIVSGGAGG-LGEATVRRLHADGL-GVVIADLAAEKGKALADEL---GNRAEFVSTNVTSE 88 (281)
T ss_dssp TTEEEEEETTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHh---CCceEEEEcCCCCH
Confidence 5678888886654 4433 444544 8999999988776665544 33688888888654
No 419
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=93.48 E-value=0.76 Score=29.09 Aligned_cols=59 Identities=15% Similarity=0.177 Sum_probs=38.3
Q ss_pred CCCeEEEEcCCCChHHHH----HHhcCCCeEEEEeCChhH-HHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSDS-LELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~----~~~~~~~~v~~vD~s~~~-~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++.| ++.. +++.+ .+|+.++.++.. .+...+.....+.++.++.+|+.+.
T Consensus 46 ~gk~vlVTGas~G-IG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~ 109 (291)
T 3ijr_A 46 KGKNVLITGGDSG-IGRAVSIAFAKEG-ANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDE 109 (291)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCC-CEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCH
Confidence 5678888886554 4433 34444 489999988753 4444444444555788899988764
No 420
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.44 E-value=0.45 Score=27.01 Aligned_cols=54 Identities=17% Similarity=0.206 Sum_probs=32.0
Q ss_pred CCeEEEEcCCCChHHHHHHh---cCCCeEEEEeCCh-hHHHHHHHHhhccCCceeEEEccccC
Q 033605 49 NKVVADFGCGCGTLGAAATL---LGADQVIAIDIDS-DSLELASENAADLELDIDFVQCDIRN 107 (115)
Q Consensus 49 ~~~vLDlG~G~G~~~~~~~~---~~~~~v~~vD~s~-~~~~~a~~~~~~~~~~v~~~~~d~~~ 107 (115)
..+++=+|+ |..+..+++ ....+|+++|.++ +.++........ .+.++.+|..+
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~---~~~~i~gd~~~ 60 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGD---NADVIPGDSND 60 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCT---TCEEEESCTTS
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcC---CCeEEEcCCCC
Confidence 346776765 666555542 2234899999974 545444433221 46778888754
No 421
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=93.39 E-value=0.44 Score=29.99 Aligned_cols=59 Identities=14% Similarity=0.295 Sum_probs=39.4
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~ 108 (115)
+++++|=.|++ |.++..++ +.+ .+|++++-++..++.........+. ++.++.+|+.+.
T Consensus 27 ~~k~vlITGas-ggIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 90 (286)
T 1xu9_A 27 QGKKVIVTGAS-KGIGREMAYHLAKMG-AHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDM 90 (286)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCH
Confidence 46688877754 55554444 444 4899999998877766555444443 678888888753
No 422
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=93.39 E-value=0.78 Score=28.62 Aligned_cols=60 Identities=17% Similarity=0.245 Sum_probs=38.4
Q ss_pred CCCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHh-hccCCceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENA-ADLELDIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~v~~~~~d~~~~ 108 (115)
.+++++|=.|++ |.++..++ +.+ .+|++++.++..++...+.. ...+.++.++.+|+.+.
T Consensus 19 l~~k~~lVTGas-~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~ 83 (267)
T 1vl8_A 19 LRGRVALVTGGS-RGLGFGIAQGLAEAG-CSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNY 83 (267)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCH
T ss_pred CCCCEEEEECCC-CHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCH
Confidence 356778877765 44444443 444 48999999987766554444 22344678888887653
No 423
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=93.37 E-value=0.71 Score=28.97 Aligned_cols=60 Identities=20% Similarity=0.289 Sum_probs=37.0
Q ss_pred CCCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
.+++++|=.|++.|. ++..+++.+. +|+.++-++ ..+...+.....+.++.++.+|+.+.
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~ 91 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTD-GVKEVADEIADGGGSAEAVVADLADL 91 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESST-HHHHHHHHHHTTTCEEEEEECCTTCH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHH-HHHHHHHHHHhcCCcEEEEEecCCCH
Confidence 367788888876543 2333444544 899999554 44444444444444788888888764
No 424
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=93.35 E-value=0.29 Score=32.05 Aligned_cols=46 Identities=26% Similarity=0.313 Sum_probs=33.8
Q ss_pred cCCCCCCeEEEEcCC-CChHHHHHHhcC-CCeEEEEeCChhHHHHHHH
Q 033605 44 FGDVSNKVVADFGCG-CGTLGAAATLLG-ADQVIAIDIDSDSLELASE 89 (115)
Q Consensus 44 ~~~~~~~~vLDlG~G-~G~~~~~~~~~~-~~~v~~vD~s~~~~~~a~~ 89 (115)
....++++||=.|+| .|..+..+++.. ..+|+++|.+++.++.+++
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~ 229 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER 229 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 456678899999985 344555566532 4489999999998888875
No 425
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=93.32 E-value=0.21 Score=33.22 Aligned_cols=46 Identities=28% Similarity=0.231 Sum_probs=34.8
Q ss_pred CCCCCCeEEEEcCC-CChHHHHHHhc-CCCeEEEEeCChhHHHHHHHH
Q 033605 45 GDVSNKVVADFGCG-CGTLGAAATLL-GADQVIAIDIDSDSLELASEN 90 (115)
Q Consensus 45 ~~~~~~~vLDlG~G-~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~ 90 (115)
...++++||=+|+| .|..+..+++. +..+|+++|.++..++.+++.
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l 257 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL 257 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc
Confidence 35578899999986 35566666654 445999999999999888765
No 426
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=93.32 E-value=0.66 Score=28.69 Aligned_cols=57 Identities=16% Similarity=0.159 Sum_probs=35.8
Q ss_pred CeEEEEcCCCChHHHHH----HhcCCCeEEEEeCChhH--HHHHHHHhhccCCceeEEEccccCC
Q 033605 50 KVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDS--LELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 50 ~~vLDlG~G~G~~~~~~----~~~~~~~v~~vD~s~~~--~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++|=.|++ |.++..+ ++.+. +|+.++.++.. ++...+.....+.++.++.+|+.+.
T Consensus 3 k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 65 (258)
T 3a28_C 3 KVAMVTGGA-QGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDK 65 (258)
T ss_dssp CEEEEETTT-SHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred CEEEEeCCC-cHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCH
Confidence 467767755 4444443 34444 89999988776 5554444444344788888888653
No 427
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=93.29 E-value=0.37 Score=31.18 Aligned_cols=51 Identities=39% Similarity=0.451 Sum_probs=36.9
Q ss_pred HHHhcCCCCCCeEEEEcCCC-ChHHHHHHh-cCCCeEEEEeCChhHHHHHHHH
Q 033605 40 AENSFGDVSNKVVADFGCGC-GTLGAAATL-LGADQVIAIDIDSDSLELASEN 90 (115)
Q Consensus 40 ~~~~~~~~~~~~vLDlG~G~-G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~~ 90 (115)
........++++||=.|+|. |.++..+++ .+...++++|.+++.++.+++.
T Consensus 152 ~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l 204 (346)
T 4a2c_A 152 AFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF 204 (346)
T ss_dssp HHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT
T ss_pred HHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc
Confidence 33444666888999999873 445555665 4566789999999998888764
No 428
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.29 E-value=0.17 Score=32.76 Aligned_cols=48 Identities=10% Similarity=0.050 Sum_probs=35.5
Q ss_pred HhcCCCCCCeEEEEcC--CCChHHHHHHhcCCCeEEEEeCChhHHHHHHH
Q 033605 42 NSFGDVSNKVVADFGC--GCGTLGAAATLLGADQVIAIDIDSDSLELASE 89 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~--G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~ 89 (115)
......++++||-.|+ |.|.....+++....+|++++.+++.++.+++
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~ 198 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKT 198 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 3345567889999997 46666777765434599999999988887763
No 429
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=93.28 E-value=0.43 Score=30.90 Aligned_cols=51 Identities=27% Similarity=0.264 Sum_probs=36.7
Q ss_pred HHhcCCCCCCeEEEEcCCCCh-HHHHHHh-cCCCeEEEEeCChhHHHHHHHHh
Q 033605 41 ENSFGDVSNKVVADFGCGCGT-LGAAATL-LGADQVIAIDIDSDSLELASENA 91 (115)
Q Consensus 41 ~~~~~~~~~~~vLDlG~G~G~-~~~~~~~-~~~~~v~~vD~s~~~~~~a~~~~ 91 (115)
+......++++||=+|+|.+. +...+++ .+..+|+++|.+++.++.+++.-
T Consensus 156 l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~G 208 (348)
T 4eez_A 156 IKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIG 208 (348)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTT
T ss_pred ecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcC
Confidence 344456678899999998543 4444444 55679999999999888776643
No 430
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=93.20 E-value=0.9 Score=28.15 Aligned_cols=61 Identities=18% Similarity=0.212 Sum_probs=42.2
Q ss_pred CCCeEEEEcCC--CCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCCc
Q 033605 48 SNKVVADFGCG--CGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLE 109 (115)
Q Consensus 48 ~~~~vLDlG~G--~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~ 109 (115)
+++++|=.|++ .|. ++..+++.+. +|+.++-++...+.+.+.....+. ++.++.+|+.+..
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 72 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDA 72 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHH
Confidence 56788888876 233 3344445554 899999888777766666655554 7889999987643
No 431
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=93.19 E-value=0.63 Score=28.56 Aligned_cols=59 Identities=20% Similarity=0.210 Sum_probs=37.1
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeC-ChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDI-DSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~-s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|+ +|.++..++ +.+ .+|+.++. ++...+...+.....+.++.++.+|+.+.
T Consensus 3 ~~k~vlVTGa-s~giG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 66 (246)
T 2uvd_A 3 KGKVALVTGA-SRGIGRAIAIDLAKQG-ANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANA 66 (246)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH
Confidence 4557776664 455554444 344 48999988 77666655554444444678888887653
No 432
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=93.18 E-value=0.49 Score=26.03 Aligned_cols=38 Identities=29% Similarity=0.377 Sum_probs=25.3
Q ss_pred CCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHH
Q 033605 49 NKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASE 89 (115)
Q Consensus 49 ~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~ 89 (115)
+.+|+=+|+ |..+..++ +.+ .+|+++|.+++.++.++.
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g-~~v~~~d~~~~~~~~~~~ 45 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKG-HDIVLIDIDKDICKKASA 45 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCC-CeEEEEECCHHHHHHHHH
Confidence 457887876 55554444 333 489999999987766554
No 433
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=93.14 E-value=0.63 Score=28.81 Aligned_cols=59 Identities=15% Similarity=0.091 Sum_probs=38.9
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|+ +|.++..++ +.+ .+|++++-++...+.........+.++.++.+|+.+.
T Consensus 13 ~~k~vlITGa-sggiG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 75 (266)
T 1xq1_A 13 KAKTVLVTGG-TKGIGHAIVEEFAGFG-AVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLR 75 (266)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCH
Confidence 4567776665 555555544 344 4899999988777665555544444788888887653
No 434
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=93.13 E-value=0.66 Score=29.27 Aligned_cols=59 Identities=29% Similarity=0.400 Sum_probs=38.7
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhcc-CCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADL-ELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++ |.++..++ +.+ .+|++++-++...+...+..... +.++.++.+|+.+.
T Consensus 25 ~~k~vlITGas-ggiG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~ 88 (302)
T 1w6u_A 25 QGKVAFITGGG-TGLGKGMTTLLSSLG-AQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDP 88 (302)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCH
Confidence 45678877754 55554444 444 48999999987776555544332 44788888888753
No 435
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.13 E-value=0.23 Score=29.11 Aligned_cols=49 Identities=18% Similarity=0.304 Sum_probs=31.3
Q ss_pred CCeEEEEcCCCChHHHHHH----hc-CCCeEEEEeCChhHHHHHHHHhhccCCceeEEEcccc
Q 033605 49 NKVVADFGCGCGTLGAAAT----LL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIR 106 (115)
Q Consensus 49 ~~~vLDlG~G~G~~~~~~~----~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~ 106 (115)
+.+|+=+|+| .++..++ +. +. +|+++|.+++.++.++.. .+.++.+|..
T Consensus 39 ~~~v~IiG~G--~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~------g~~~~~gd~~ 92 (183)
T 3c85_A 39 HAQVLILGMG--RIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSE------GRNVISGDAT 92 (183)
T ss_dssp TCSEEEECCS--HHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHT------TCCEEECCTT
T ss_pred CCcEEEECCC--HHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHC------CCCEEEcCCC
Confidence 5588888875 4443333 33 44 899999999888776532 2345556654
No 436
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=93.11 E-value=0.72 Score=28.50 Aligned_cols=60 Identities=17% Similarity=0.174 Sum_probs=40.8
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhcc--C-CceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADL--E-LDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~-~~v~~~~~d~~~~ 108 (115)
+++++|=.|++.|. ++..+++.+. +|+.++.+++.++...+..... + .++.++.+|+.+.
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 71 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDC 71 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCH
Confidence 56688888876543 2334445555 9999999998887776655443 2 3678888888764
No 437
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=93.08 E-value=0.79 Score=28.84 Aligned_cols=57 Identities=23% Similarity=0.332 Sum_probs=38.7
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++.|. ++..+++.+. +|+.+|.+++..+...+.. +.++.++.+|+.+.
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~ 87 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKI---GCGAAACRVDVSDE 87 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCH
Confidence 66788888876553 2344445544 9999999988776655544 33678888887654
No 438
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=93.03 E-value=0.22 Score=32.37 Aligned_cols=49 Identities=18% Similarity=0.105 Sum_probs=37.2
Q ss_pred HhcCCCCCCeEEEEcC--CCChHHHHHHhcCCCeEEEEeCChhHHHHHHHH
Q 033605 42 NSFGDVSNKVVADFGC--GCGTLGAAATLLGADQVIAIDIDSDSLELASEN 90 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~--G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~ 90 (115)
......++++||-.|+ |.|..+..+++....+|++++.+++..+.+++.
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ 203 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSV 203 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc
Confidence 4445567889999997 367777777764445999999999988888764
No 439
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=93.03 E-value=0.52 Score=29.64 Aligned_cols=58 Identities=12% Similarity=0.184 Sum_probs=37.7
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++ |.++..++ +.+ .+|++++.+++..+...+.....+ ++.++.+|+.+.
T Consensus 28 ~~k~vlVTGas-~gIG~aia~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~ 89 (276)
T 2b4q_A 28 AGRIALVTGGS-RGIGQMIAQGLLEAG-ARVFICARDAEACADTATRLSAYG-DCQAIPADLSSE 89 (276)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCH
Confidence 56678877765 44444443 444 489999999877766555554434 677777777653
No 440
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=92.96 E-value=0.51 Score=28.94 Aligned_cols=59 Identities=17% Similarity=0.123 Sum_probs=37.9
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCC-hhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDID-SDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s-~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|+ +|.++..++ +.+ .+|++++-+ +..++...+.....+.++.++.+|+.+.
T Consensus 6 ~~k~vlVTGa-sggiG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 69 (258)
T 3afn_B 6 KGKRVLITGS-SQGIGLATARLFARAG-AKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATS 69 (258)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTT-CEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSH
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCC-CEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCH
Confidence 4567776654 566555554 344 489999988 6666555554444444788888888654
No 441
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=92.94 E-value=0.65 Score=29.54 Aligned_cols=59 Identities=25% Similarity=0.290 Sum_probs=39.0
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhccCC---ceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLEL---DIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~v~~~~~d~~~~ 108 (115)
+++++|=.|++ |.++..++ +.+ .+|+.++.+++.++...+.....+. ++.++.+|+.+.
T Consensus 25 ~~k~vlVTGas-~gIG~aia~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~ 90 (297)
T 1xhl_A 25 SGKSVIITGSS-NGIGRSAAVIFAKEG-AQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEA 90 (297)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCH
Confidence 56678777754 45554444 444 4899999998877666555544443 678888887654
No 442
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=92.93 E-value=0.99 Score=27.94 Aligned_cols=58 Identities=17% Similarity=0.153 Sum_probs=38.7
Q ss_pred CCCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
.+++++|=.|++.|. ++..+++.+. +|+.++.+++.++...+.. +.++.++.+|+.+.
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~ 66 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEF---GPRVHALRSDIADL 66 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCH
Confidence 366788888866543 2333444544 9999999988776665544 22678888887654
No 443
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=92.93 E-value=0.75 Score=29.73 Aligned_cols=60 Identities=18% Similarity=0.078 Sum_probs=40.2
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEe-CChhHHHHHHHHhh-ccCCceeEEEccccCCc
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAID-IDSDSLELASENAA-DLELDIDFVQCDIRNLE 109 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD-~s~~~~~~a~~~~~-~~~~~v~~~~~d~~~~~ 109 (115)
+++++|=.|++ |.++..++ +.+ .+|+.++ .++..++.+.+.+. ..+.++.++.+|+.+..
T Consensus 45 ~~k~~lVTGas-~GIG~aia~~La~~G-~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~ 110 (328)
T 2qhx_A 45 TVPVALVTGAA-KRLGRSIAEGLHAEG-YAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVA 110 (328)
T ss_dssp CCCEEEETTCS-SHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSC
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCch
Confidence 55677766654 55554444 444 4999999 88877766655543 33447889999988754
No 444
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=92.89 E-value=0.52 Score=30.30 Aligned_cols=59 Identities=17% Similarity=0.207 Sum_probs=38.6
Q ss_pred CCCeEEEEcCCCChHHHH----HHhcCCCeEEEEeCC----------hhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDID----------SDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~----~~~~~~~~v~~vD~s----------~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++. .++.. +++.+ .+|+.+|.+ ....+.........+.++.++.+|+.+.
T Consensus 26 ~gk~vlVTGas~-GIG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~ 98 (322)
T 3qlj_A 26 DGRVVIVTGAGG-GIGRAHALAFAAEG-ARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADW 98 (322)
T ss_dssp TTCEEEETTTTS-HHHHHHHHHHHHTT-CEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSH
T ss_pred CCCEEEEECCCc-HHHHHHHHHHHHCC-CEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCH
Confidence 567888777654 44443 44454 499999987 5566655555555555788888887654
No 445
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=92.80 E-value=0.27 Score=31.97 Aligned_cols=48 Identities=33% Similarity=0.214 Sum_probs=35.2
Q ss_pred HhcCCCCCCeEEEEcCC-CChHHHHHHhc-CCCeEEEEeCChhHHHHHHHH
Q 033605 42 NSFGDVSNKVVADFGCG-CGTLGAAATLL-GADQVIAIDIDSDSLELASEN 90 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~G-~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~ 90 (115)
..... ++++||-+|+| .|.....+++. +..+|+++|.+++.++.+++.
T Consensus 162 ~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~ 211 (348)
T 2d8a_A 162 LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV 211 (348)
T ss_dssp TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH
T ss_pred HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 44455 78899999985 35566666654 434899999999988888753
No 446
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=92.80 E-value=0.98 Score=28.53 Aligned_cols=59 Identities=24% Similarity=0.326 Sum_probs=39.5
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhc-----cCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAAD-----LELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~-----~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|+ +|.++..++ +.+ .+|++++-++...+...+.... .+.++.++.+|+.+.
T Consensus 17 ~~k~vlVTGa-sggIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~ 84 (303)
T 1yxm_A 17 QGQVAIVTGG-ATGIGKAIVKELLELG-SNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNE 84 (303)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCH
Confidence 5668887775 455555554 344 4899999998777665554433 233788888988653
No 447
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=92.71 E-value=0.53 Score=29.72 Aligned_cols=60 Identities=17% Similarity=0.132 Sum_probs=37.9
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChh-------HHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSD-------SLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~-------~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++.|. ++..+++.+. +|+.++.++. .++...+.....+.++.++.+|+.+.
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 77 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDG 77 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCH
Confidence 56788888876553 2333444444 9999998876 34444444444455788888888764
No 448
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=92.71 E-value=0.26 Score=32.36 Aligned_cols=42 Identities=17% Similarity=0.218 Sum_probs=33.9
Q ss_pred CCCeEEEEc-CC-CChHHHHHHhc-CCCeEEEEeCChhHHHHHHH
Q 033605 48 SNKVVADFG-CG-CGTLGAAATLL-GADQVIAIDIDSDSLELASE 89 (115)
Q Consensus 48 ~~~~vLDlG-~G-~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~ 89 (115)
++++||=.| +| .|..+..+++. +..+|++++.+++.++.+++
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~ 215 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS 215 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH
Confidence 577899888 44 67778888874 66799999999998888865
No 449
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=92.71 E-value=0.85 Score=28.68 Aligned_cols=60 Identities=18% Similarity=0.207 Sum_probs=38.9
Q ss_pred CCCeEEEEcCCCChHHHHHHh---cCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAATL---LGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~~---~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++ |.++..+++ ....+|++++-++...+...+.....+.++.++.+|+.+.
T Consensus 43 ~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~ 105 (285)
T 2c07_A 43 ENKVALVTGAG-RGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKK 105 (285)
T ss_dssp SSCEEEEESTT-SHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCH
Confidence 35677777654 565555552 1235899998887776665555544445788888888653
No 450
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=92.64 E-value=0.83 Score=27.80 Aligned_cols=58 Identities=16% Similarity=0.138 Sum_probs=37.5
Q ss_pred CeEEEEcCCCChHHHHHH----hcCCC------eEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 50 KVVADFGCGCGTLGAAAT----LLGAD------QVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 50 ~~vLDlG~G~G~~~~~~~----~~~~~------~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++|=.|+ +|.++..++ +.+.. +|++++.++..++.........+.++.++.+|+.+.
T Consensus 3 k~vlITGa-sggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 70 (244)
T 2bd0_A 3 HILLITGA-GKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDM 70 (244)
T ss_dssp EEEEEETT-TSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSH
T ss_pred CEEEEECC-CChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCH
Confidence 45666664 555555544 33332 799999988777666655544444788888888653
No 451
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=92.64 E-value=0.26 Score=31.81 Aligned_cols=46 Identities=20% Similarity=0.232 Sum_probs=34.8
Q ss_pred CCCCCCeEEEEcC--CCChHHHHHHhcCCCeEEEEeCChhHHHHHHHH
Q 033605 45 GDVSNKVVADFGC--GCGTLGAAATLLGADQVIAIDIDSDSLELASEN 90 (115)
Q Consensus 45 ~~~~~~~vLDlG~--G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~ 90 (115)
...++++||-.|+ |.|..+..+++....+|++++.+++.++.+++.
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ 192 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEY 192 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc
Confidence 4567889999994 366667777764445999999999988877663
No 452
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=92.59 E-value=0.82 Score=28.30 Aligned_cols=59 Identities=20% Similarity=0.142 Sum_probs=38.4
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeC-ChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDI-DSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~-s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|+ +|.++..++ +.+ .+|++++- ++...+.........+.++.++.+|+.+.
T Consensus 20 ~~k~vlItGa-sggiG~~la~~l~~~G-~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~ 83 (274)
T 1ja9_A 20 AGKVALTTGA-GRGIGRGIAIELGRRG-ASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKP 83 (274)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCC-CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCH
Confidence 4567886664 566655554 344 48999988 77666555554444445788888888653
No 453
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=92.59 E-value=0.72 Score=28.76 Aligned_cols=59 Identities=8% Similarity=-0.014 Sum_probs=38.1
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeC-ChhHHHHHHHHhhcc-CCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDI-DSDSLELASENAADL-ELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~-s~~~~~~a~~~~~~~-~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++ |.++..++ +.+ .+|+.++. ++...+...+..... +.++.++.+|+.+.
T Consensus 10 ~~k~~lVTGas-~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~ 74 (276)
T 1mxh_A 10 ECPAAVITGGA-RRIGHSIAVRLHQQG-FRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLS 74 (276)
T ss_dssp -CCEEEETTCS-SHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSS
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCC-CEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCc
Confidence 45677766654 55555544 344 49999998 877766655544333 44788889998765
No 454
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=92.55 E-value=0.81 Score=28.18 Aligned_cols=57 Identities=23% Similarity=0.278 Sum_probs=37.5
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++.|. ++..+++.+. +|+.++.+++..+...... +.++.++.+|+.+.
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~ 64 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASI---GKKARAIAADISDP 64 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHH---CTTEEECCCCTTCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh---CCceEEEEcCCCCH
Confidence 66788888866543 2333444544 8999999988776655444 33677888887653
No 455
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=92.55 E-value=0.75 Score=28.84 Aligned_cols=60 Identities=17% Similarity=0.112 Sum_probs=39.2
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhc-cCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAAD-LELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++.|. ++..+++.+. +|+.++.++............ .+.++.++.+|+.+.
T Consensus 26 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 89 (277)
T 4fc7_A 26 RDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAP 89 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCH
Confidence 66788888866443 2333334444 999999998776655544432 344788888888654
No 456
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=92.53 E-value=0.77 Score=28.32 Aligned_cols=56 Identities=16% Similarity=0.294 Sum_probs=37.6
Q ss_pred CCCeEEEEcCCCChHHHH----HHhcCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccc
Q 033605 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDI 105 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~----~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~ 105 (115)
+++++|=.|++.| ++.. +++.+. +|+.++.+++.++...+.....+. ++.++..|+
T Consensus 11 ~~k~vlVTGas~g-IG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~ 71 (252)
T 3f1l_A 11 NDRIILVTGASDG-IGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDL 71 (252)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCT
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 5678888886544 4433 344544 899999998887766665544333 677888887
No 457
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=92.48 E-value=0.61 Score=29.10 Aligned_cols=59 Identities=20% Similarity=0.163 Sum_probs=37.5
Q ss_pred CCCeEEEEcCCCChHHHH----HHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~----~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++. .++.. +++.+. +|++++-++...+...+.....+.++.++.+|+.+.
T Consensus 33 ~~k~vlITGasg-gIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~ 95 (279)
T 3ctm_A 33 KGKVASVTGSSG-GIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDP 95 (279)
T ss_dssp TTCEEEETTTTS-SHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCH
T ss_pred CCCEEEEECCCc-HHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCH
Confidence 567888777654 44433 444544 899999887665555444443344688888887653
No 458
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=92.47 E-value=0.36 Score=31.52 Aligned_cols=47 Identities=11% Similarity=0.070 Sum_probs=34.3
Q ss_pred hcCCCCCCeEEEEcC--CCChHHHHHHhcCCCeEEEEeCChhHHHHHHH
Q 033605 43 SFGDVSNKVVADFGC--GCGTLGAAATLLGADQVIAIDIDSDSLELASE 89 (115)
Q Consensus 43 ~~~~~~~~~vLDlG~--G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~ 89 (115)
.....++++||-.|+ |.|.....+++....+|++++.+++.++.+++
T Consensus 165 ~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 213 (351)
T 1yb5_A 165 SACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ 213 (351)
T ss_dssp TSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred hhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH
Confidence 345567889999996 45666666665434599999999988887654
No 459
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=92.47 E-value=0.44 Score=30.08 Aligned_cols=59 Identities=19% Similarity=0.244 Sum_probs=37.7
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~ 108 (115)
+++++|=.|++ |.++..++ +.+ .+|+.++.+++.++...+.....+. .+.++.+|+.+.
T Consensus 32 ~gk~~lVTGas-~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~ 95 (281)
T 4dry_A 32 EGRIALVTGGG-TGVGRGIAQALSAEG-YSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDP 95 (281)
T ss_dssp --CEEEETTTT-SHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCH
Confidence 56778877765 44444443 444 4999999999887766655543332 358888888654
No 460
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=92.42 E-value=0.23 Score=31.97 Aligned_cols=47 Identities=11% Similarity=0.105 Sum_probs=34.9
Q ss_pred cCCCCCCeEEEEc-C-CCChHHHHHHhcCCCeEEEEeCChhHHHHHHHH
Q 033605 44 FGDVSNKVVADFG-C-GCGTLGAAATLLGADQVIAIDIDSDSLELASEN 90 (115)
Q Consensus 44 ~~~~~~~~vLDlG-~-G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~ 90 (115)
....++++||-.| + |.|..+..+++....+|++++.+++.++.+++.
T Consensus 136 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ 184 (325)
T 3jyn_A 136 YQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKAL 184 (325)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc
Confidence 3456788999988 3 366677777754344999999999998888764
No 461
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=92.42 E-value=0.23 Score=31.61 Aligned_cols=44 Identities=16% Similarity=0.075 Sum_probs=33.9
Q ss_pred CCCCCeEEEEcC--CCChHHHHHHhcCCCeEEEEeCChhHHHHHHH
Q 033605 46 DVSNKVVADFGC--GCGTLGAAATLLGADQVIAIDIDSDSLELASE 89 (115)
Q Consensus 46 ~~~~~~vLDlG~--G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~ 89 (115)
..++++||-.|+ |.|.....+++....+|++++.+++.++.+++
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 168 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA 168 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 457889999997 35667777775434599999999998888765
No 462
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=92.41 E-value=0.64 Score=29.53 Aligned_cols=59 Identities=19% Similarity=0.127 Sum_probs=38.4
Q ss_pred CCCeEEEEcCCC----Ch-HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGC----GT-LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~----G~-~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++. |. ++..+++.+. +|+.++.++...+.+.+.....+ .+.++.+|+.+.
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~ 92 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLG-VKLTVPCDVSDA 92 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHT-CCEEEECCTTCH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcC-CeEEEEcCCCCH
Confidence 567899888753 32 3344445544 89999999876665555544433 467888887654
No 463
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=92.40 E-value=0.5 Score=30.49 Aligned_cols=47 Identities=15% Similarity=0.043 Sum_probs=35.0
Q ss_pred hcCCCCCCeEEEEcC--CCChHHHHHHhcCCCeEEEEeCChhHHHHHHH
Q 033605 43 SFGDVSNKVVADFGC--GCGTLGAAATLLGADQVIAIDIDSDSLELASE 89 (115)
Q Consensus 43 ~~~~~~~~~vLDlG~--G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~ 89 (115)
.....++++||-.|+ |.|.....+++....+|++++.+++.++.+++
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~ 188 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK 188 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 334567889999995 56777777765434599999999988887765
No 464
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=92.40 E-value=1.2 Score=27.54 Aligned_cols=60 Identities=13% Similarity=0.101 Sum_probs=39.2
Q ss_pred CCCCeEEEEcCC-CChHHHHH----HhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 47 VSNKVVADFGCG-CGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G-~G~~~~~~----~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
.+++++|=.|++ +|.++..+ ++.+ .+|+.++.++...+.+++.....+ ++.++.+|+.+.
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~ 76 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREG-AELAFTYVGDRFKDRITEFAAEFG-SELVFPCDVADD 76 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHHHHHTT-CCCEEECCTTCH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcC-CCEEEEecchhhHHHHHHHHHHcC-CcEEEECCCCCH
Confidence 467889989864 24444444 3444 499999988766665555544444 577888887654
No 465
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=92.38 E-value=1.1 Score=27.76 Aligned_cols=59 Identities=25% Similarity=0.333 Sum_probs=37.5
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhcc--CCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADL--ELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++ |.++..++ +.+ .+|++++.++...+...+..... +.++.++.+|+.+.
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 70 (260)
T 2z1n_A 6 QGKLAVVTAGS-SGLGFASALELARNG-ARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREP 70 (260)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCH
Confidence 45678877765 44444443 444 48999999987766555444322 22678888887653
No 466
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=92.37 E-value=0.99 Score=27.53 Aligned_cols=57 Identities=23% Similarity=0.304 Sum_probs=36.3
Q ss_pred CeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHh-hccCCceeEEEccccCC
Q 033605 50 KVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENA-ADLELDIDFVQCDIRNL 108 (115)
Q Consensus 50 ~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~v~~~~~d~~~~ 108 (115)
+++|=.|+ +|.++..++ +.+ .+|++++.++...+...+.. ...+.++.++.+|+.+.
T Consensus 3 k~vlItGa-sggiG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 64 (250)
T 2cfc_A 3 RVAIVTGA-SSGNGLAIATRFLARG-DRVAALDLSAETLEETARTHWHAYADKVLRVRADVADE 64 (250)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCH
T ss_pred CEEEEeCC-CchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCH
Confidence 46776665 455555544 344 48999999887766555444 22233678888888653
No 467
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=92.33 E-value=0.86 Score=28.05 Aligned_cols=59 Identities=19% Similarity=0.104 Sum_probs=37.2
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeC-ChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDI-DSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~-s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|+ +|.++..++ +.+ .+|++++- ++...+...+.....+.++.++.+|+.+.
T Consensus 6 ~~k~vlITGa-sggiG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~ 69 (261)
T 1gee_A 6 EGKVVVITGS-STGLGKSMAIRFATEK-AKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVE 69 (261)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSH
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCC-CEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCH
Confidence 4567776664 455555544 344 48999998 76666555444444444678888887653
No 468
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=92.24 E-value=1.3 Score=27.78 Aligned_cols=60 Identities=12% Similarity=0.096 Sum_probs=39.3
Q ss_pred CCCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCCc
Q 033605 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE 109 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 109 (115)
.+++++|=-|.+.|. .+..+++.+. +|+.+|.+.. +...+.....+.++.++++|+.+..
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~ 69 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAP--DETLDIIAKDGGNASALLIDFADPL 69 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTT
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHH
Confidence 367788877777665 3444555555 9999998754 2333444445558889999987643
No 469
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=92.23 E-value=0.8 Score=28.22 Aligned_cols=59 Identities=19% Similarity=0.183 Sum_probs=36.0
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhccC-------CceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLE-------LDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~-------~~v~~~~~d~~~~ 108 (115)
+++++|=.|++ |.++..++ +.+ .+|++++-++...+...+.....+ .++.++.+|+.+.
T Consensus 6 ~~k~vlITGas-ggiG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 75 (264)
T 2pd6_A 6 RSALALVTGAG-SGIGRAVSVRLAGEG-ATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEA 75 (264)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCH
Confidence 45677777654 44554444 444 489999999877665554443322 3678888887653
No 470
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=92.23 E-value=1.3 Score=27.60 Aligned_cols=60 Identities=25% Similarity=0.300 Sum_probs=37.8
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCC-hhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDID-SDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s-~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++.|. ++..+++.+. +|+.++.. +...+...+.....+.++.++.+|+.+.
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 80 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQV 80 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH
Confidence 56788877765443 2333444544 88887764 4555555555555555788899988764
No 471
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=92.20 E-value=1.3 Score=28.01 Aligned_cols=60 Identities=17% Similarity=0.116 Sum_probs=39.0
Q ss_pred CCCCeEEEEcCCCC----h-HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCG----T-LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G----~-~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
.+++++|=.|++.| . ++..+++.+. +|+.++.++...+.+++.....+ ++.++.+|+.+.
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~ 93 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELG-AFVAGHCDVADA 93 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHT-CEEEEECCTTCH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC-CceEEECCCCCH
Confidence 46788999997633 2 3344455554 89999988765555554444333 577888888654
No 472
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=92.20 E-value=0.88 Score=28.65 Aligned_cols=58 Identities=16% Similarity=0.150 Sum_probs=37.7
Q ss_pred CCCeEEEEcCCCChHHHHH----HhcCCCeEEEEeCCh-hHHHHHHHHhh-ccCCceeEEEccccC
Q 033605 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDS-DSLELASENAA-DLELDIDFVQCDIRN 107 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~----~~~~~~~v~~vD~s~-~~~~~a~~~~~-~~~~~v~~~~~d~~~ 107 (115)
+++++|=.|++ |.++..+ ++.+. +|+.++.++ +..+...+... ..+.++.++.+|+.+
T Consensus 22 ~~k~~lVTGas-~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~ 85 (288)
T 2x9g_A 22 EAPAAVVTGAA-KRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTN 85 (288)
T ss_dssp CCCEEEETTCS-SHHHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSC
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCC
Confidence 56678877765 4444444 34554 899999987 66655544443 334478888899876
No 473
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=92.18 E-value=1.2 Score=27.82 Aligned_cols=59 Identities=19% Similarity=0.262 Sum_probs=38.5
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhccC--CceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLE--LDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~v~~~~~d~~~~ 108 (115)
+++++|=.|+ +|.++..++ +.+ .+|++++-++..++.........+ .++.++.+|+.+.
T Consensus 31 ~~k~vlVTGa-sggIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~ 95 (279)
T 1xg5_A 31 RDRLALVTGA-SGGIGAAVARALVQQG-LKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNE 95 (279)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCC-CEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCH
Confidence 4567887775 455555444 344 489999999877766655544433 2577888887654
No 474
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=92.17 E-value=0.47 Score=31.00 Aligned_cols=46 Identities=22% Similarity=0.208 Sum_probs=32.8
Q ss_pred hcCCC-CCCeEEEEcCC-CChHHHHHHhcCCCeEEEEeCChhHHHHHH
Q 033605 43 SFGDV-SNKVVADFGCG-CGTLGAAATLLGADQVIAIDIDSDSLELAS 88 (115)
Q Consensus 43 ~~~~~-~~~~vLDlG~G-~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~ 88 (115)
..... ++++||-+|+| .|..+..+++....+|++++.+++.++.++
T Consensus 174 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~ 221 (357)
T 2cf5_A 174 HFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEAL 221 (357)
T ss_dssp HTSTTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHH
T ss_pred hcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Confidence 34555 78899999875 345555666532349999999998887776
No 475
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=92.14 E-value=1.1 Score=27.32 Aligned_cols=56 Identities=21% Similarity=0.266 Sum_probs=38.3
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhccCC-ceeEEEccc
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDI 105 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~ 105 (115)
+++++|=.|++ |.++..++ +.+. +|+.++.++..++...+.....+. ++.++..|+
T Consensus 13 ~~k~vlITGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~ 73 (247)
T 3i1j_A 13 KGRVILVTGAA-RGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNL 73 (247)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCT
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEecc
Confidence 56788877765 44444443 4444 899999999888877776665543 667777766
No 476
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=92.14 E-value=0.96 Score=27.55 Aligned_cols=59 Identities=20% Similarity=0.284 Sum_probs=36.2
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEE-eCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAI-DIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~v-D~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++ |.++..++ +.+ .+|+++ +.++...+...+.....+.++.++.+|+.+.
T Consensus 4 ~~~~vlItGas-ggiG~~~a~~l~~~G-~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 67 (247)
T 2hq1_A 4 KGKTAIVTGSS-RGLGKAIAWKLGNMG-ANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNP 67 (247)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTT-CEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSH
T ss_pred CCcEEEEECCC-chHHHHHHHHHHHCC-CEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCH
Confidence 45677766654 55555444 344 489888 5666655555444444444788888887653
No 477
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=92.11 E-value=1.2 Score=27.50 Aligned_cols=56 Identities=25% Similarity=0.194 Sum_probs=37.1
Q ss_pred CCCeEEEEcCCCChHHHH----HHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~----~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++ |.++.. +++.+. +|+.+|.+++..+...... +.++.++.+|+.+.
T Consensus 7 ~~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~ 66 (259)
T 4e6p_A 7 EGKSALITGSA-RGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEI---GPAAYAVQMDVTRQ 66 (259)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh---CCCceEEEeeCCCH
Confidence 56788888865 444444 344444 8999999988776655443 23678888887653
No 478
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=92.10 E-value=0.74 Score=28.77 Aligned_cols=54 Identities=20% Similarity=0.196 Sum_probs=35.2
Q ss_pred CeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 50 KVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 50 ~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
++||=-|++.|. .+..+++.+. +|+.+|.+++..+...+ ...++.++++|+.+.
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~ 59 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAK----ERPNLFYFHGDVADP 59 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHT----TCTTEEEEECCTTSH
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----hcCCEEEEEecCCCH
Confidence 467767766654 3444445554 99999999876654432 223678888888653
No 479
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=92.07 E-value=0.77 Score=28.65 Aligned_cols=59 Identities=20% Similarity=0.240 Sum_probs=37.4
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHh---hccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENA---ADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~---~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++ |.++..++ +.+ .+|++++-++..++...+.. ...+.++.++.+|+.+.
T Consensus 5 ~~k~vlVTGas-~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 70 (278)
T 1spx_A 5 AEKVAIITGSS-NGIGRATAVLFAREG-AKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTD 70 (278)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCH
Confidence 45677766654 44444444 444 49999999988776655544 22222678888888653
No 480
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=92.05 E-value=1.1 Score=27.33 Aligned_cols=56 Identities=21% Similarity=0.367 Sum_probs=37.0
Q ss_pred CCCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccC
Q 033605 47 VSNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRN 107 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~ 107 (115)
.+++++|=.|++. .++..++ +.+ .+|+.++.++..++...+.... ++.++.+|+.+
T Consensus 12 ~~~k~vlVTGas~-gIG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~ 71 (249)
T 3f9i_A 12 LTGKTSLITGASS-GIGSAIARLLHKLG-SKVIISGSNEEKLKSLGNALKD---NYTIEVCNLAN 71 (249)
T ss_dssp CTTCEEEETTTTS-HHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHCS---SEEEEECCTTS
T ss_pred CCCCEEEEECCCC-hHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHhcc---CccEEEcCCCC
Confidence 4667888777654 4444443 444 4899999998877766554432 57777777755
No 481
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=92.03 E-value=1 Score=28.33 Aligned_cols=60 Identities=12% Similarity=0.118 Sum_probs=40.2
Q ss_pred CCCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 47 ~~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
.+++++|=-|++.|. .+..+++.+. +|+.++.+++..+.+... ...+.++.++.+|+.+.
T Consensus 5 L~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~-~~~~~~~~~~~~Dv~~~ 67 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDAL-AQRQPRATYLPVELQDD 67 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHH-HHHCTTCEEEECCTTCH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHH-HhcCCCEEEEEeecCCH
Confidence 377888888887765 3444555555 899999887765554433 33344788888888653
No 482
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=91.96 E-value=0.45 Score=28.73 Aligned_cols=50 Identities=16% Similarity=0.050 Sum_probs=32.2
Q ss_pred eEEEEcCCCChHHHHHHh---cCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccC
Q 033605 51 VVADFGCGCGTLGAAATL---LGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRN 107 (115)
Q Consensus 51 ~vLDlG~G~G~~~~~~~~---~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~ 107 (115)
+|+=+|+ |.++..+++ ....+|+++|.+++.++...... .+.++.+|..+
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-----~~~~i~gd~~~ 54 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-----KATIIHGDGSH 54 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-----SSEEEESCTTS
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-----CCeEEEcCCCC
Confidence 4555665 666655552 22349999999999887655432 35677777654
No 483
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=91.89 E-value=1.3 Score=27.85 Aligned_cols=57 Identities=21% Similarity=0.156 Sum_probs=37.6
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++.|. ++..+++.+ .+|+.++.+++.++...... +.++.++.+|+.+.
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~ 63 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEG-ARVAVLDKSAERLRELEVAH---GGNAVGVVGDVRSL 63 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHT---BTTEEEEECCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCc-CEEEEEeCCHHHHHHHHHHc---CCcEEEEEcCCCCH
Confidence 56788888866543 233344454 49999999988776654433 33678888888653
No 484
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=91.88 E-value=0.73 Score=29.23 Aligned_cols=59 Identities=15% Similarity=0.165 Sum_probs=37.0
Q ss_pred CCCeEEEEcCCCChHHHHH----HhcCCCeEEEEeCCh--hHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDS--DSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~----~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++.| ++..+ ++.+. +|+.++.+. ...+.........+.++.++.+|+.+.
T Consensus 48 ~~k~vlVTGas~G-IG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~ 112 (294)
T 3r3s_A 48 KDRKALVTGGDSG-IGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDE 112 (294)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCH
Confidence 5678888886544 44443 34444 899998863 344444444444455788888887653
No 485
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=91.88 E-value=0.99 Score=27.46 Aligned_cols=59 Identities=19% Similarity=0.211 Sum_probs=37.4
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhHHHHHHHHhhc-cCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAAD-LELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|+ +|.++..++ +.+ .+|++++-++...+........ .+.++.++.+|+.+.
T Consensus 6 ~~~~vlVtGa-sggiG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 69 (248)
T 2pnf_A 6 QGKVSLVTGS-TRGIGRAIAEKLASAG-STVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSE 69 (248)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCH
Confidence 4567776665 555555554 344 4899999988776655544332 234678888887653
No 486
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=91.83 E-value=0.72 Score=28.55 Aligned_cols=59 Identities=14% Similarity=0.197 Sum_probs=35.9
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeCChhH-HHHHHHHhhcc-CCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDS-LELASENAADL-ELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~s~~~-~~~a~~~~~~~-~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++ |.++..++ +.+ .+|+.++.++.. ++...+..... +.++.++.+|+.+.
T Consensus 3 ~~k~vlVTGas-~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 67 (260)
T 1x1t_A 3 KGKVAVVTGST-SGIGLGIATALAAQG-ADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKG 67 (260)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTT-CEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHcC-CEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCH
Confidence 45677766654 44544444 444 489999988776 55544443322 34677888887653
No 487
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=91.80 E-value=1.4 Score=27.16 Aligned_cols=57 Identities=25% Similarity=0.222 Sum_probs=38.5
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++.|. ++..+++.+. +|+.++-++..++...+.. +.++.++.+|+.+.
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~ 67 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEI---GDAALAVAADISKE 67 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---CTTEEEEECCTTSH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHh---CCceEEEEecCCCH
Confidence 56788888876543 2344445544 8999999988776665543 33678888887654
No 488
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=91.74 E-value=1.3 Score=27.87 Aligned_cols=60 Identities=15% Similarity=0.212 Sum_probs=38.2
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeC-ChhHHHHHHHHhhcc-CCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDI-DSDSLELASENAADL-ELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~-s~~~~~~a~~~~~~~-~~~v~~~~~d~~~~ 108 (115)
.++++|=.|++.|. ++..+++.+. +|+.++. ++...+...+..... +.++.++.+|+.+.
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~ 88 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKP 88 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCH
Confidence 56788888865543 2333444544 9999998 556665555554443 33788888888653
No 489
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=91.74 E-value=0.98 Score=28.26 Aligned_cols=60 Identities=22% Similarity=0.173 Sum_probs=37.4
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhH-------HHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDS-------LELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~-------~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++.|. ++..+++.+. +|+.++.++.. ++.........+.++.++.+|+.+.
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 74 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREE 74 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence 56788888877553 2334445554 89999987642 3333343444444788888888654
No 490
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=91.69 E-value=1.3 Score=27.10 Aligned_cols=59 Identities=15% Similarity=0.110 Sum_probs=35.9
Q ss_pred CCCeEEEEcCCCChHHHHHH----hcCCCeEEEEeC-ChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDI-DSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~~~~~v~~vD~-s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
.++++|=.|++ |.++..++ +.+ .+|+.++. +++..+...+.....+.++.++.+|+.+.
T Consensus 3 ~~k~~lVTGas-~gIG~~ia~~l~~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~ 66 (246)
T 3osu_A 3 MTKSALVTGAS-RGIGRSIALQLAEEG-YNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADA 66 (246)
T ss_dssp CSCEEEETTCS-SHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCH
Confidence 34566666654 44444443 444 48888876 44555555555555555788888888653
No 491
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=91.64 E-value=0.63 Score=30.22 Aligned_cols=43 Identities=14% Similarity=0.210 Sum_probs=32.3
Q ss_pred CCCeEEEEc-CC-CChHHHHHHhcCCCeEEEEeCChhHHHHHHHH
Q 033605 48 SNKVVADFG-CG-CGTLGAAATLLGADQVIAIDIDSDSLELASEN 90 (115)
Q Consensus 48 ~~~~vLDlG-~G-~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~ 90 (115)
++++||=.| +| .|..+..+++...++|++++.+++.++.+++.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l 194 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKM 194 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc
Confidence 678999884 44 56666667764445999999999998888763
No 492
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=91.62 E-value=1.1 Score=27.97 Aligned_cols=57 Identities=23% Similarity=0.191 Sum_probs=37.2
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++.|. ++..+++.+. +|+.+|.+++.++...... +.++.++.+|+.+.
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~ 69 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASV---GRGAVHHVVDLTNE 69 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHH---CTTCEEEECCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHh---CCCeEEEECCCCCH
Confidence 56788888865443 2333444544 8999999988776655544 33677778887653
No 493
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=91.61 E-value=1.1 Score=27.88 Aligned_cols=58 Identities=14% Similarity=0.111 Sum_probs=38.0
Q ss_pred CCCeEEEEcCCCChHHHHH----HhcCCCeEEEEeCChhHHHHHHHHhhccC--CceeEEEccccC
Q 033605 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADLE--LDIDFVQCDIRN 107 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~----~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~v~~~~~d~~~ 107 (115)
+++++|=.|++. .++..+ ++.+ .+|+.++.+++..+...+...... ..+.++.+|+.+
T Consensus 9 ~~k~~lVTGas~-gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~ 72 (267)
T 3t4x_A 9 KGKTALVTGSTA-GIGKAIATSLVAEG-ANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGT 72 (267)
T ss_dssp TTCEEEETTCSS-HHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTS
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCC
Confidence 567788777654 444443 3444 499999999888766665554432 267778888765
No 494
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=91.61 E-value=0.72 Score=28.49 Aligned_cols=60 Identities=15% Similarity=0.150 Sum_probs=37.9
Q ss_pred CCCeEEEEcCCCChHHHHHH----hc--CCCeEEEEeCChhHHHHHHHHhhcc--CCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGTLGAAAT----LL--GADQVIAIDIDSDSLELASENAADL--ELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~~~~~~~----~~--~~~~v~~vD~s~~~~~~a~~~~~~~--~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++. .++..++ +. ...+|+.++.+++.++...+..... +.++.++.+|+.+.
T Consensus 5 ~~k~~lVTGas~-gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~ 72 (259)
T 1oaa_A 5 GCAVCVLTGASR-GFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTE 72 (259)
T ss_dssp BSEEEEESSCSS-HHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSH
T ss_pred CCcEEEEeCCCC-hHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCH
Confidence 456777666554 4444433 31 2459999999988776665554432 33678888888653
No 495
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.58 E-value=0.3 Score=31.43 Aligned_cols=46 Identities=15% Similarity=0.169 Sum_probs=33.9
Q ss_pred hcCCCCCCeEEEEcC--CCChHHHHHHh-cCCCeEEEEeCChhHHHHHHH
Q 033605 43 SFGDVSNKVVADFGC--GCGTLGAAATL-LGADQVIAIDIDSDSLELASE 89 (115)
Q Consensus 43 ~~~~~~~~~vLDlG~--G~G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~ 89 (115)
.....++++||-.|+ |.|.....+++ .+. +|+++|.+++.++.+++
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~ 183 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALK 183 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHH
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH
Confidence 334567889999983 46666666664 444 99999999988888765
No 496
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=91.56 E-value=0.37 Score=31.47 Aligned_cols=47 Identities=15% Similarity=0.084 Sum_probs=34.1
Q ss_pred hcCCCCCCeEEEEcC--CCChHHHHHHhcCCCeEEEEeCChhHHHHHHH
Q 033605 43 SFGDVSNKVVADFGC--GCGTLGAAATLLGADQVIAIDIDSDSLELASE 89 (115)
Q Consensus 43 ~~~~~~~~~vLDlG~--G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~ 89 (115)
.....++++||-.|+ |.|.....+++....+|++++.+++.++.+++
T Consensus 157 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 205 (354)
T 2j8z_A 157 VGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEK 205 (354)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred hcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 334567889999984 45666666665434599999999998888754
No 497
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=91.55 E-value=1.5 Score=26.80 Aligned_cols=55 Identities=20% Similarity=0.170 Sum_probs=36.4
Q ss_pred CCeEEEEcCCCChHHHH----HHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 49 NKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 49 ~~~vLDlG~G~G~~~~~----~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
++++|=.|++.| ++.. +++.+. +|+.++.+++.++........ ++.++.+|+.+.
T Consensus 3 ~k~vlVTGas~G-IG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~ 61 (235)
T 3l6e_A 3 LGHIIVTGAGSG-LGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGN---AVIGIVADLAHH 61 (235)
T ss_dssp CCEEEEESTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG---GEEEEECCTTSH
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcC---CceEEECCCCCH
Confidence 356777776544 4433 344444 899999999887766655532 578888887653
No 498
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=91.54 E-value=0.34 Score=31.65 Aligned_cols=49 Identities=18% Similarity=0.068 Sum_probs=35.6
Q ss_pred HhcCCCCCCeEEEEcC--CCChHHHHHHhcCCCeEEEEeCChhHHHHHHHH
Q 033605 42 NSFGDVSNKVVADFGC--GCGTLGAAATLLGADQVIAIDIDSDSLELASEN 90 (115)
Q Consensus 42 ~~~~~~~~~~vLDlG~--G~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~ 90 (115)
......++++||-.|+ |.|.....+++....+|++++.+++.++.+++.
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l 211 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERL 211 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc
Confidence 3345567889998853 356667777754445999999999998888764
No 499
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=91.53 E-value=1.5 Score=27.60 Aligned_cols=57 Identities=19% Similarity=0.210 Sum_probs=37.3
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++.|. ++..+++.+. +|+.+|.+++.+....... +.++.++.+|+.+.
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~ 85 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEI---GSKAFGVRVDVSSA 85 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHH---CTTEEEEECCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh---CCceEEEEecCCCH
Confidence 56788888866443 2333344444 9999999987766554442 33678888887653
No 500
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=91.48 E-value=1.5 Score=27.00 Aligned_cols=57 Identities=18% Similarity=0.178 Sum_probs=36.7
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhcCCCeEEEEeCChhHHHHHHHHhhccCCceeEEEccccCC
Q 033605 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (115)
Q Consensus 48 ~~~~vLDlG~G~G~---~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (115)
+++++|=.|++.|. ++..+++.+ .+|+.++.++...+...+.... ++.++.+|+.+.
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv~d~ 67 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERG-AKVIGTATSESGAQAISDYLGD---NGKGMALNVTNP 67 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHGG---GEEEEECCTTCH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhcc---cceEEEEeCCCH
Confidence 56788877766443 233344444 4899999998877666555433 456777777653
Done!