Query 033607
Match_columns 115
No_of_seqs 136 out of 1076
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 06:28:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033607.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033607hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1klx_A Cysteine rich protein B 99.4 3.6E-13 1.2E-17 93.0 7.9 57 38-97 44-100 (138)
2 1klx_A Cysteine rich protein B 99.4 9.3E-13 3.2E-17 90.9 7.0 64 32-98 74-137 (138)
3 3rjv_A Putative SEL1 repeat pr 99.0 3.6E-10 1.2E-14 81.8 6.0 61 34-97 68-132 (212)
4 3e4b_A ALGK; tetratricopeptide 99.0 3.1E-10 1E-14 91.4 6.2 60 34-96 337-396 (452)
5 3rjv_A Putative SEL1 repeat pr 99.0 5.4E-10 1.9E-14 80.9 6.4 61 34-97 144-207 (212)
6 3e4b_A ALGK; tetratricopeptide 99.0 6.3E-10 2.2E-14 89.6 6.1 60 34-97 302-361 (452)
7 2xm6_A Protein corresponding t 98.8 9.4E-09 3.2E-13 81.9 7.4 61 35-98 59-119 (490)
8 2xm6_A Protein corresponding t 98.8 1.8E-08 6E-13 80.4 7.8 61 34-97 346-406 (490)
9 1ouv_A Conserved hypothetical 98.6 1.3E-07 4.4E-12 68.8 6.8 62 36-100 203-264 (273)
10 1ouv_A Conserved hypothetical 98.4 6.8E-07 2.3E-11 64.9 7.4 60 35-97 58-117 (273)
11 1na3_A Designed protein CTPR2; 94.6 0.13 4.4E-06 30.1 6.1 47 35-88 25-73 (91)
12 3vtx_A MAMA; tetratricopeptide 93.9 0.16 5.4E-06 33.9 6.0 54 35-95 123-178 (184)
13 3ma5_A Tetratricopeptide repea 93.5 0.19 6.5E-06 31.3 5.5 46 35-87 23-70 (100)
14 2v5f_A Prolyl 4-hydroxylase su 93.2 0.12 4.1E-06 33.0 4.3 31 53-87 4-34 (104)
15 1zu2_A Mitochondrial import re 92.5 0.13 4.5E-06 37.1 4.1 51 35-88 62-121 (158)
16 2kc7_A BFR218_protein; tetratr 92.2 0.42 1.4E-05 28.7 5.7 47 35-88 16-65 (99)
17 4ga2_A E3 SUMO-protein ligase 92.2 0.41 1.4E-05 31.9 6.1 47 35-88 47-95 (150)
18 2l6j_A TPR repeat-containing p 92.0 0.59 2E-05 28.0 6.2 47 35-88 20-68 (111)
19 2kck_A TPR repeat; tetratricop 92.0 0.59 2E-05 27.6 6.1 48 35-89 22-71 (112)
20 4gcn_A Protein STI-1; structur 91.6 0.52 1.8E-05 30.6 5.9 46 35-87 24-71 (127)
21 2xcb_A PCRH, regulatory protei 91.2 0.51 1.7E-05 30.7 5.6 44 36-86 35-80 (142)
22 2kck_A TPR repeat; tetratricop 91.2 0.96 3.3E-05 26.6 6.4 47 35-88 56-107 (112)
23 4gco_A Protein STI-1; structur 91.2 0.65 2.2E-05 30.2 6.1 30 53-86 80-109 (126)
24 2v5f_A Prolyl 4-hydroxylase su 91.1 0.67 2.3E-05 29.4 6.0 51 34-88 20-76 (104)
25 2kat_A Uncharacterized protein 91.1 0.62 2.1E-05 28.9 5.7 45 36-87 36-82 (115)
26 2vgx_A Chaperone SYCD; alterna 90.9 0.53 1.8E-05 31.4 5.6 45 36-87 72-118 (148)
27 2lni_A Stress-induced-phosphop 90.8 1.1 3.6E-05 27.4 6.6 46 36-88 33-80 (133)
28 3sz7_A HSC70 cochaperone (SGT) 90.7 0.75 2.6E-05 30.3 6.1 44 36-86 62-107 (164)
29 2xcb_A PCRH, regulatory protei 90.4 0.83 2.8E-05 29.6 6.0 46 35-87 68-115 (142)
30 3sz7_A HSC70 cochaperone (SGT) 90.3 0.81 2.8E-05 30.2 6.0 47 35-88 27-75 (164)
31 1na0_A Designed protein CTPR3; 90.1 1.1 3.8E-05 26.6 6.1 30 53-86 76-105 (125)
32 2lni_A Stress-induced-phosphop 90.0 1.4 4.9E-05 26.8 6.7 47 35-88 66-114 (133)
33 2xev_A YBGF; tetratricopeptide 90.0 1 3.6E-05 27.7 6.0 46 36-88 56-106 (129)
34 3k9i_A BH0479 protein; putativ 89.9 0.89 3E-05 28.5 5.7 45 36-87 44-90 (117)
35 3upv_A Heat shock protein STI1 89.9 1.1 3.7E-05 28.0 6.1 30 53-86 37-66 (126)
36 2pl2_A Hypothetical conserved 89.9 0.73 2.5E-05 32.3 5.8 46 36-87 135-180 (217)
37 3bee_A Putative YFRE protein; 89.7 1.1 3.7E-05 28.6 6.0 49 35-90 25-75 (93)
38 3gyz_A Chaperone protein IPGC; 89.7 0.66 2.3E-05 31.8 5.3 44 36-86 53-98 (151)
39 3k9i_A BH0479 protein; putativ 89.4 0.35 1.2E-05 30.5 3.4 46 36-88 7-57 (117)
40 4gco_A Protein STI-1; structur 89.4 1 3.6E-05 29.2 5.9 47 35-88 29-77 (126)
41 1elw_A TPR1-domain of HOP; HOP 89.3 1.5 5.2E-05 25.9 6.2 45 36-87 55-101 (118)
42 3upv_A Heat shock protein STI1 89.3 1.3 4.4E-05 27.7 6.1 47 35-88 54-102 (126)
43 1elr_A TPR2A-domain of HOP; HO 89.2 1.2 4.1E-05 26.9 5.7 47 35-88 20-68 (131)
44 2kat_A Uncharacterized protein 89.1 1.2 4E-05 27.6 5.8 44 38-88 4-49 (115)
45 1hxi_A PEX5, peroxisome target 88.9 1.3 4.4E-05 28.4 6.0 47 35-88 33-81 (121)
46 2dba_A Smooth muscle cell asso 88.9 1.2 4E-05 27.8 5.7 47 35-88 44-95 (148)
47 3gyz_A Chaperone protein IPGC; 88.8 1.2 4.1E-05 30.5 6.1 48 35-89 86-135 (151)
48 3rkv_A Putative peptidylprolyl 88.6 1.3 4.5E-05 29.0 6.0 46 36-88 80-127 (162)
49 1na0_A Designed protein CTPR3; 88.5 1.7 5.8E-05 25.8 6.1 47 35-88 25-73 (125)
50 3q49_B STIP1 homology and U bo 88.4 1.6 5.5E-05 27.1 6.1 30 53-86 76-105 (137)
51 1elw_A TPR1-domain of HOP; HOP 88.3 1.5 5.2E-05 25.8 5.7 47 35-88 20-68 (118)
52 4i17_A Hypothetical protein; T 87.9 1.7 5.9E-05 29.8 6.5 49 36-88 24-72 (228)
53 3q49_B STIP1 homology and U bo 87.9 1.8 6E-05 27.0 6.0 47 35-88 25-73 (137)
54 2fbn_A 70 kDa peptidylprolyl i 87.9 1.5 5.2E-05 29.7 6.1 46 36-88 105-152 (198)
55 1elr_A TPR2A-domain of HOP; HO 87.9 0.95 3.3E-05 27.3 4.6 49 36-88 55-109 (131)
56 3urz_A Uncharacterized protein 87.8 1.2 4.2E-05 30.9 5.7 47 35-88 70-118 (208)
57 2vgx_A Chaperone SYCD; alterna 87.7 1.6 5.5E-05 29.0 6.1 47 35-88 37-85 (148)
58 2vyi_A SGTA protein; chaperone 87.6 2.1 7.1E-05 25.6 6.1 45 36-87 63-109 (131)
59 2fo7_A Synthetic consensus TPR 86.8 3.3 0.00011 24.6 6.7 47 35-88 51-99 (136)
60 1a17_A Serine/threonine protei 86.8 2.1 7.3E-05 27.1 6.1 45 36-87 64-110 (166)
61 4ga2_A E3 SUMO-protein ligase 86.8 0.45 1.5E-05 31.7 2.8 50 32-88 10-61 (150)
62 4gcn_A Protein STI-1; structur 86.8 2.6 8.8E-05 27.1 6.5 48 36-87 59-112 (127)
63 1hxi_A PEX5, peroxisome target 86.7 0.93 3.2E-05 29.1 4.3 46 36-88 68-115 (121)
64 1hh8_A P67PHOX, NCF-2, neutrop 86.2 2.1 7.3E-05 28.7 6.1 45 36-87 54-100 (213)
65 2xev_A YBGF; tetratricopeptide 85.9 2.7 9.1E-05 25.8 6.0 47 35-88 18-69 (129)
66 2dba_A Smooth muscle cell asso 85.7 4.6 0.00016 25.0 9.8 46 36-88 82-129 (148)
67 2vyi_A SGTA protein; chaperone 85.6 2.8 9.6E-05 25.0 5.9 46 36-88 29-76 (131)
68 2e2e_A Formate-dependent nitri 85.5 2.6 8.9E-05 27.7 6.1 31 53-87 114-144 (177)
69 1a17_A Serine/threonine protei 85.5 2.7 9.3E-05 26.6 6.0 47 35-88 29-77 (166)
70 3vtx_A MAMA; tetratricopeptide 85.3 3.1 0.00011 27.4 6.4 49 35-90 21-71 (184)
71 3edt_B KLC 2, kinesin light ch 84.8 4.2 0.00014 27.7 7.1 54 27-87 16-72 (283)
72 3ma5_A Tetratricopeptide repea 84.7 1.4 4.8E-05 27.1 4.3 33 52-88 5-37 (100)
73 3qky_A Outer membrane assembly 84.1 2.5 8.7E-05 29.7 5.9 45 36-87 32-81 (261)
74 2pl2_A Hypothetical conserved 83.5 3.1 0.00011 28.9 6.1 49 33-88 98-148 (217)
75 1ihg_A Cyclophilin 40; ppiase 83.2 2.9 0.0001 32.5 6.4 46 36-88 290-337 (370)
76 3uq3_A Heat shock protein STI1 83.1 2.9 0.0001 28.2 5.7 47 35-87 21-67 (258)
77 4i17_A Hypothetical protein; T 83.0 3.2 0.00011 28.3 5.9 47 35-88 58-106 (228)
78 2fo7_A Synthetic consensus TPR 82.3 5.8 0.0002 23.4 7.2 46 36-88 18-65 (136)
79 3ro3_A PINS homolog, G-protein 82.2 6 0.00021 24.2 6.5 47 36-86 66-117 (164)
80 1hh8_A P67PHOX, NCF-2, neutrop 82.0 1.8 6E-05 29.1 4.1 46 35-88 22-67 (213)
81 1xnf_A Lipoprotein NLPI; TPR, 81.8 4.1 0.00014 28.0 6.1 30 53-86 76-105 (275)
82 1p5q_A FKBP52, FK506-binding p 81.6 3.5 0.00012 31.2 6.1 46 36-88 213-260 (336)
83 3rkv_A Putative peptidylprolyl 81.4 2.8 9.7E-05 27.3 5.0 50 35-88 27-93 (162)
84 3as5_A MAMA; tetratricopeptide 81.2 5.1 0.00017 25.3 6.0 32 52-87 108-139 (186)
85 2fbn_A 70 kDa peptidylprolyl i 80.8 4.9 0.00017 27.1 6.1 30 55-88 89-118 (198)
86 3ulq_A Response regulator aspa 80.8 3 0.0001 31.1 5.4 46 35-87 240-293 (383)
87 4abn_A Tetratricopeptide repea 80.7 3.1 0.00011 33.0 5.8 49 33-88 235-288 (474)
88 3u3w_A Transcriptional activat 80.5 6.2 0.00021 28.5 7.0 48 36-86 213-265 (293)
89 3ro3_A PINS homolog, G-protein 80.2 3.8 0.00013 25.1 5.1 49 35-87 25-78 (164)
90 3urz_A Uncharacterized protein 79.7 3.8 0.00013 28.3 5.4 47 35-88 20-84 (208)
91 3edt_B KLC 2, kinesin light ch 79.7 3.6 0.00012 28.0 5.2 48 36-87 60-114 (283)
92 3as5_A MAMA; tetratricopeptide 79.7 6.3 0.00022 24.9 6.1 45 36-87 127-173 (186)
93 1pc2_A Mitochondria fission pr 79.5 2.7 9.2E-05 30.1 4.6 48 37-88 53-101 (152)
94 1xnf_A Lipoprotein NLPI; TPR, 79.5 5.6 0.00019 27.3 6.1 47 35-88 93-141 (275)
95 1na3_A Designed protein CTPR2; 79.1 2.3 7.7E-05 24.4 3.5 32 53-88 8-39 (91)
96 1kt0_A FKBP51, 51 kDa FK506-bi 78.8 5.3 0.00018 31.6 6.5 46 36-88 334-381 (457)
97 2if4_A ATFKBP42; FKBP-like, al 78.7 4.6 0.00016 30.6 6.0 45 36-87 247-293 (338)
98 3uq3_A Heat shock protein STI1 78.5 7.7 0.00026 26.1 6.5 50 35-88 54-109 (258)
99 2e2e_A Formate-dependent nitri 78.1 2.7 9.3E-05 27.6 4.0 30 53-86 43-72 (177)
100 1p5q_A FKBP52, FK506-binding p 77.9 5.8 0.0002 29.9 6.3 31 54-88 196-226 (336)
101 3ieg_A DNAJ homolog subfamily 77.2 7.3 0.00025 27.5 6.3 46 36-88 289-336 (359)
102 2vq2_A PILW, putative fimbrial 77.1 9.6 0.00033 25.0 6.6 44 36-86 59-105 (225)
103 2ifu_A Gamma-SNAP; membrane fu 77.1 2 7E-05 31.6 3.5 45 37-86 94-143 (307)
104 2vq2_A PILW, putative fimbrial 76.6 6.7 0.00023 25.8 5.7 30 53-86 146-175 (225)
105 4abn_A Tetratricopeptide repea 76.4 4.8 0.00016 31.9 5.7 46 36-88 120-167 (474)
106 2r5s_A Uncharacterized protein 76.2 6.8 0.00023 26.0 5.7 44 38-88 93-138 (176)
107 2ho1_A Type 4 fimbrial biogene 76.2 5 0.00017 27.4 5.1 13 73-85 190-202 (252)
108 3u4t_A TPR repeat-containing p 75.9 2.7 9.3E-05 29.0 3.7 31 52-87 140-171 (272)
109 2q7f_A YRRB protein; TPR, prot 75.9 8.2 0.00028 25.9 6.1 13 73-85 140-152 (243)
110 4gyw_A UDP-N-acetylglucosamine 75.8 4.9 0.00017 34.6 5.9 45 36-87 26-72 (723)
111 3u4t_A TPR repeat-containing p 75.6 4.4 0.00015 27.9 4.7 47 38-88 198-251 (272)
112 2ho1_A Type 4 fimbrial biogene 75.5 8.6 0.00029 26.2 6.2 47 35-88 121-171 (252)
113 2qfc_A PLCR protein; TPR, HTH, 75.4 6.5 0.00022 28.4 5.8 48 36-87 172-225 (293)
114 2c2l_A CHIP, carboxy terminus 75.3 6.7 0.00023 28.6 5.9 45 36-87 55-101 (281)
115 3hym_B Cell division cycle pro 75.2 7.5 0.00026 27.2 5.9 31 53-87 235-265 (330)
116 2yhc_A BAMD, UPF0169 lipoprote 75.0 7.4 0.00025 26.9 5.8 47 35-88 20-71 (225)
117 1kt0_A FKBP51, 51 kDa FK506-bi 75.0 9.8 0.00033 30.1 7.1 31 54-88 317-347 (457)
118 2q7f_A YRRB protein; TPR, prot 74.8 8.9 0.00031 25.7 6.0 45 37-88 75-121 (243)
119 2l6j_A TPR repeat-containing p 74.3 4.7 0.00016 23.8 4.1 32 53-88 3-34 (111)
120 4eqf_A PEX5-related protein; a 74.0 7 0.00024 28.4 5.7 46 35-87 193-242 (365)
121 3cv0_A Peroxisome targeting si 73.9 9.2 0.00031 26.7 6.1 31 52-86 238-268 (327)
122 4g1t_A Interferon-induced prot 73.8 0.8 2.7E-05 34.8 0.4 36 52-91 428-463 (472)
123 3qky_A Outer membrane assembly 73.6 4.1 0.00014 28.6 4.2 50 36-88 69-127 (261)
124 4gyw_A UDP-N-acetylglucosamine 73.4 6.5 0.00022 33.9 6.1 30 53-86 76-105 (723)
125 2ifu_A Gamma-SNAP; membrane fu 73.4 10 0.00036 27.7 6.5 48 35-86 131-183 (307)
126 1fch_A Peroxisomal targeting s 72.6 11 0.00036 27.2 6.3 30 53-86 284-313 (368)
127 1fch_A Peroxisomal targeting s 72.3 13 0.00044 26.7 6.7 46 36-88 81-128 (368)
128 4eqf_A PEX5-related protein; a 72.3 12 0.00042 27.1 6.7 46 36-88 82-129 (365)
129 1wao_1 Serine/threonine protei 72.0 9.2 0.00031 30.6 6.3 45 36-87 57-103 (477)
130 2h6f_A Protein farnesyltransfe 71.2 10 0.00035 29.7 6.4 48 35-88 113-162 (382)
131 3sf4_A G-protein-signaling mod 70.6 12 0.0004 27.1 6.2 48 36-87 284-336 (406)
132 1qqe_A Vesicular transport pro 70.4 14 0.00047 26.8 6.5 50 35-88 134-188 (292)
133 3ulq_A Response regulator aspa 70.3 6.8 0.00023 29.1 4.9 44 36-86 120-171 (383)
134 3q15_A PSP28, response regulat 70.2 8.4 0.00029 28.7 5.4 49 35-87 238-290 (378)
135 3ro2_A PINS homolog, G-protein 70.1 16 0.00054 25.2 6.5 48 36-87 240-292 (338)
136 3ro2_A PINS homolog, G-protein 70.0 10 0.00034 26.2 5.5 49 36-88 280-333 (338)
137 2y4t_A DNAJ homolog subfamily 69.9 11 0.00038 28.0 6.0 46 36-88 312-359 (450)
138 1qqe_A Vesicular transport pro 69.5 6.2 0.00021 28.7 4.5 44 36-86 54-105 (292)
139 2c2l_A CHIP, carboxy terminus 69.2 11 0.00039 27.4 5.9 47 35-88 20-68 (281)
140 3nf1_A KLC 1, kinesin light ch 69.0 9.5 0.00032 26.4 5.2 48 36-87 86-140 (311)
141 3fp2_A TPR repeat-containing p 68.8 14 0.00048 28.1 6.5 50 33-89 442-493 (537)
142 2hr2_A Hypothetical protein; a 68.6 10 0.00035 27.0 5.3 45 36-87 74-131 (159)
143 2qfc_A PLCR protein; TPR, HTH, 68.6 12 0.0004 27.0 5.8 48 35-86 212-265 (293)
144 2vsy_A XCC0866; transferase, g 68.4 12 0.00042 29.7 6.3 30 53-86 56-85 (568)
145 2vsy_A XCC0866; transferase, g 68.3 11 0.00039 29.9 6.1 30 53-86 90-119 (568)
146 4a1s_A PINS, partner of inscut 67.7 9.2 0.00031 28.1 5.1 48 36-87 103-155 (411)
147 3gw4_A Uncharacterized protein 67.5 7.7 0.00026 25.4 4.3 47 36-86 83-135 (203)
148 3q15_A PSP28, response regulat 67.2 14 0.00049 27.4 6.2 47 36-86 199-250 (378)
149 3gw4_A Uncharacterized protein 67.1 9.4 0.00032 24.9 4.6 48 36-87 43-95 (203)
150 4f3v_A ESX-1 secretion system 66.3 11 0.00037 29.2 5.5 46 36-88 188-238 (282)
151 1wao_1 Serine/threonine protei 66.1 19 0.00065 28.7 7.1 52 30-88 17-70 (477)
152 3nf1_A KLC 1, kinesin light ch 66.1 12 0.00041 25.9 5.2 48 36-87 128-182 (311)
153 2xpi_A Anaphase-promoting comp 65.5 14 0.00049 28.6 6.0 46 36-88 533-580 (597)
154 2y4t_A DNAJ homolog subfamily 65.4 16 0.00053 27.2 6.0 46 36-88 43-90 (450)
155 3hym_B Cell division cycle pro 65.4 20 0.00069 24.9 6.4 44 36-86 176-221 (330)
156 3u3w_A Transcriptional activat 65.4 21 0.00072 25.6 6.6 45 35-86 131-183 (293)
157 2if4_A ATFKBP42; FKBP-like, al 64.2 14 0.00048 27.8 5.7 29 56-88 232-260 (338)
158 2pzi_A Probable serine/threoni 63.9 12 0.00042 31.2 5.7 46 36-88 450-497 (681)
159 3mkr_A Coatomer subunit epsilo 63.2 22 0.00077 26.0 6.5 49 35-88 182-230 (291)
160 3cv0_A Peroxisome targeting si 62.8 22 0.00076 24.7 6.2 31 53-87 54-84 (327)
161 2gw1_A Mitochondrial precursor 62.7 19 0.00063 27.1 6.0 50 34-90 430-481 (514)
162 1ihg_A Cyclophilin 40; ppiase 62.7 10 0.00035 29.3 4.8 33 52-88 271-303 (370)
163 3ieg_A DNAJ homolog subfamily 61.7 21 0.0007 25.1 5.8 47 36-89 54-102 (359)
164 3u64_A Protein TP_0956; tetrat 61.7 12 0.00043 29.6 5.1 56 29-87 214-269 (301)
165 4a1s_A PINS, partner of inscut 61.3 12 0.0004 27.5 4.6 47 36-86 280-331 (411)
166 1w3b_A UDP-N-acetylglucosamine 60.3 25 0.00087 25.7 6.3 30 53-86 270-299 (388)
167 1w3b_A UDP-N-acetylglucosamine 60.1 30 0.001 25.3 6.7 46 36-88 152-199 (388)
168 3sf4_A G-protein-signaling mod 59.4 25 0.00086 25.3 6.1 46 35-87 25-76 (406)
169 3qou_A Protein YBBN; thioredox 58.2 11 0.00036 27.6 3.9 44 36-86 134-179 (287)
170 1pc2_A Mitochondria fission pr 58.2 34 0.0012 24.2 6.5 56 30-89 9-66 (152)
171 3mkr_A Coatomer subunit epsilo 57.0 18 0.00063 26.5 5.1 43 36-88 118-160 (291)
172 3fp2_A TPR repeat-containing p 56.4 14 0.00047 28.1 4.4 44 38-88 44-89 (537)
173 3qou_A Protein YBBN; thioredox 55.9 26 0.00088 25.4 5.7 44 38-88 204-249 (287)
174 2gw1_A Mitochondrial precursor 54.7 17 0.00059 27.2 4.6 49 34-89 204-268 (514)
175 2r5s_A Uncharacterized protein 54.7 15 0.00052 24.2 3.9 44 36-86 125-172 (176)
176 4g1t_A Interferon-induced prot 52.3 44 0.0015 24.9 6.6 45 35-86 67-122 (472)
177 2ond_A Cleavage stimulation fa 51.0 43 0.0015 24.1 6.2 45 36-87 81-128 (308)
178 2yhc_A BAMD, UPF0169 lipoprote 51.0 54 0.0019 22.4 6.5 46 36-88 164-214 (225)
179 2h6f_A Protein farnesyltransfe 50.8 15 0.00052 28.7 3.9 47 35-88 148-196 (382)
180 2xpi_A Anaphase-promoting comp 48.2 37 0.0013 26.2 5.8 32 52-87 405-436 (597)
181 1hz4_A MALT regulatory protein 46.8 32 0.0011 25.0 5.0 47 36-86 31-81 (373)
182 1zu2_A Mitochondrial import re 45.0 18 0.00063 25.6 3.3 54 32-88 15-76 (158)
183 1hz4_A MALT regulatory protein 44.9 49 0.0017 24.0 5.7 48 36-87 110-164 (373)
184 4f3v_A ESX-1 secretion system 44.4 30 0.001 26.6 4.7 45 37-88 153-201 (282)
185 2ond_A Cleavage stimulation fa 43.1 90 0.0031 22.4 7.3 48 35-87 185-232 (308)
186 1ya0_A SMG-7 transcript varian 42.2 31 0.0011 28.6 4.7 46 36-88 169-216 (497)
187 3ly7_A Transcriptional activat 41.6 54 0.0018 26.5 5.9 49 35-90 293-342 (372)
188 1ny9_A Transcriptional activat 40.5 17 0.0006 24.6 2.5 38 29-66 74-111 (143)
189 3u64_A Protein TP_0956; tetrat 40.2 60 0.0021 25.6 5.8 50 36-88 180-234 (301)
190 2ooe_A Cleavage stimulation fa 37.0 1.3E+02 0.0043 23.4 7.3 49 35-88 407-455 (530)
191 2pzi_A Probable serine/threoni 32.2 64 0.0022 26.8 5.1 47 35-88 407-463 (681)
192 2hr2_A Hypothetical protein; a 29.6 1.5E+02 0.005 20.8 7.1 48 36-87 28-86 (159)
193 2cos_A Serine/threonine protei 29.3 90 0.0031 18.8 4.1 38 40-84 11-48 (54)
194 1nzn_A CGI-135 protein, fissio 28.1 1.3E+02 0.0044 20.6 5.3 50 37-90 19-70 (126)
195 3t5x_A PCI domain-containing p 26.5 55 0.0019 23.6 3.3 28 58-89 18-45 (203)
196 4b4t_Q 26S proteasome regulato 24.1 2.1E+02 0.0072 20.8 6.5 46 37-86 153-203 (434)
197 2cpw_A CBL-interacting protein 23.0 1.2E+02 0.004 18.2 3.8 32 47-82 25-56 (64)
198 3qww_A SET and MYND domain-con 23.0 94 0.0032 24.9 4.4 47 36-86 357-410 (433)
199 3mv2_B Coatomer subunit epsilo 21.8 62 0.0021 25.2 3.0 44 38-88 85-130 (310)
200 3o10_A Sacsin; all-helical dom 21.5 67 0.0023 21.9 2.8 18 69-86 1-18 (141)
201 2dak_A Ubiquitin carboxyl-term 21.1 89 0.003 18.5 3.0 33 47-84 15-47 (63)
202 1ayz_A UBC2, ubiquitin-conjuga 20.3 43 0.0015 23.7 1.6 11 76-86 140-150 (169)
No 1
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.43 E-value=3.6e-13 Score=93.04 Aligned_cols=57 Identities=18% Similarity=0.131 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcCCchhhhccc
Q 033607 38 VKRWFRDTLKEAKGGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTRSSVWKVGEK 97 (115)
Q Consensus 38 A~~wf~~~~kAA~~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G~~~~~~~~~ 97 (115)
|+.||+ ++++.|++.|+++||.+|..|.||++|+.+|+.||++|+++|++.+.++++
T Consensus 44 A~~~~~---~Aa~~g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~~~a~~~Lg 100 (138)
T 1klx_A 44 LFQYLS---KACELNSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGLNDQDGCLILG 100 (138)
T ss_dssp HHHHHH---HHHHTTCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHH---HHHcCCCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 555555 555555555555555555555555555555555555555555555444433
No 2
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.38 E-value=9.3e-13 Score=90.94 Aligned_cols=64 Identities=14% Similarity=0.119 Sum_probs=58.1
Q ss_pred hhhHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcCCchhhhcccC
Q 033607 32 EVVSDCVKRWFRDTLKEAKGGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTRSSVWKVGEKH 98 (115)
Q Consensus 32 ~~~~~~A~~wf~~~~kAA~~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G~~~~~~~~~~ 98 (115)
......|+.||+ ++++.|++.|+++||.+|..|.||++|+.+|++||++|+++|++.+...+++
T Consensus 74 ~~d~~~A~~~~~---~Aa~~g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~~~A~~~l~~ 137 (138)
T 1klx_A 74 KKDLRKAAQYYS---KACGLNDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLGSEDACGILNN 137 (138)
T ss_dssp CCCHHHHHHHHH---HHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHC--
T ss_pred CccHHHHHHHHH---HHHcCCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCCCHHHHHHHhh
Confidence 345678999999 9999999999999999999999999999999999999999999998887764
No 3
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.02 E-value=3.6e-10 Score=81.82 Aligned_cols=61 Identities=10% Similarity=0.063 Sum_probs=41.7
Q ss_pred hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcCC----chhhhccc
Q 033607 34 VSDCVKRWFRDTLKEAKGGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTRS----SVWKVGEK 97 (115)
Q Consensus 34 ~~~~A~~wf~~~~kAA~~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G~----~~~~~~~~ 97 (115)
....|+.||+ ++++.|++.|+++||.+|..|.||++|+.+|+.||++|+++|+ +.+.+.++
T Consensus 68 ~~~~A~~~~~---~A~~~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg 132 (212)
T 3rjv_A 68 DYPQARQLAE---KAVEAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLG 132 (212)
T ss_dssp CHHHHHHHHH---HHHHTTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHH
T ss_pred CHHHHHHHHH---HHHHCCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHH
Confidence 3455677777 7777777777777777777777777777777777777777776 45444443
No 4
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.02 E-value=3.1e-10 Score=91.38 Aligned_cols=60 Identities=12% Similarity=0.130 Sum_probs=44.4
Q ss_pred hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcCCchhhhcc
Q 033607 34 VSDCVKRWFRDTLKEAKGGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTRSSVWKVGE 96 (115)
Q Consensus 34 ~~~~A~~wf~~~~kAA~~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G~~~~~~~~ 96 (115)
....|+.||+ +++++|++.|+++||.||..|.||++|+.+|+.||++|+++|+..+...+
T Consensus 337 d~~~A~~~~~---~Aa~~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~A~~~g~~~a~~~l 396 (452)
T 3e4b_A 337 YPQKALDHLL---TAARNGQNSADFAIAQLFSQGKGTKPDPLNAYVFSQLAKAQDTPEANDLA 396 (452)
T ss_dssp CHHHHHHHHH---HHHTTTCTTHHHHHHHHHHSCTTBCCCHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred CHHHHHHHHH---HHHhhChHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHCCCHHHHHHH
Confidence 4456777777 77777777777777777777777777777777777777777777655443
No 5
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.01 E-value=5.4e-10 Score=80.86 Aligned_cols=61 Identities=11% Similarity=0.082 Sum_probs=54.6
Q ss_pred hHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHcCCC--CcCCHHHHHHHHHHHHhcCCchhhhccc
Q 033607 34 VSDCVKRWFRDTLKEAKG-GDINMQVLVGQMYFSGYG--VARDAQKGRIWISRASRTRSSVWKVGEK 97 (115)
Q Consensus 34 ~~~~A~~wf~~~~kAA~~-Gd~~Aq~~LG~mY~~G~G--v~kD~~kA~~Wl~kAA~~G~~~~~~~~~ 97 (115)
....|+.||+ ++++. +++.|+++||.+|..|.| |++|+.+|+.||++|+++|+..+....+
T Consensus 144 d~~~A~~~~~---~A~~~~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~~~A~~~l~ 207 (212)
T 3rjv_A 144 DDVKASEYFK---GSSSLSRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGFDTGCEEFD 207 (212)
T ss_dssp CHHHHHHHHH---HHHHTSCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred CHHHHHHHHH---HHHHcCCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 4567999999 99998 999999999999999988 9999999999999999999988765543
No 6
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.97 E-value=6.3e-10 Score=89.55 Aligned_cols=60 Identities=20% Similarity=0.236 Sum_probs=42.3
Q ss_pred hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcCCchhhhccc
Q 033607 34 VSDCVKRWFRDTLKEAKGGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTRSSVWKVGEK 97 (115)
Q Consensus 34 ~~~~A~~wf~~~~kAA~~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G~~~~~~~~~ 97 (115)
....|+.||+ +++ .|++.|+++||.||..|.||++|+.+|+.||++|+++|++.+.+.++
T Consensus 302 d~~~A~~~~~---~Aa-~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~~~A~~~Lg 361 (452)
T 3e4b_A 302 DAKAAEAHFE---KAV-GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARNGQNSADFAIA 361 (452)
T ss_dssp CHHHHHHHHH---TTT-TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTTTCTTHHHHHH
T ss_pred CHHHHHHHHH---HHh-CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhhChHHHHHHHH
Confidence 3455677777 777 77777777777777777777777777777777777777776665555
No 7
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.81 E-value=9.4e-09 Score=81.93 Aligned_cols=61 Identities=23% Similarity=0.389 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcCCchhhhcccC
Q 033607 35 SDCVKRWFRDTLKEAKGGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTRSSVWKVGEKH 98 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G~~~~~~~~~~ 98 (115)
.+.|+.||+ ++++.|++.|++.||.+|..|.||++|+.+|+.||++|+++|++.+.+.++.
T Consensus 59 ~~~A~~~~~---~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~ 119 (490)
T 2xm6_A 59 LTQAMDWFR---RAAEQGYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKGLPQAQQNLGV 119 (490)
T ss_dssp HHHHHHHHH---HHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHH---HHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 456888998 8899999999999999999999999999999999999999998887776663
No 8
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.77 E-value=1.8e-08 Score=80.35 Aligned_cols=61 Identities=30% Similarity=0.489 Sum_probs=55.5
Q ss_pred hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcCCchhhhccc
Q 033607 34 VSDCVKRWFRDTLKEAKGGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTRSSVWKVGEK 97 (115)
Q Consensus 34 ~~~~A~~wf~~~~kAA~~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G~~~~~~~~~ 97 (115)
..+.|..||+ ++++.|++.++++||.+|..|.||++|+.+|+.||++|+++|++.+.+.++
T Consensus 346 ~~~~A~~~~~---~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~~~~a~~~Lg 406 (490)
T 2xm6_A 346 EHKKAVEWFR---KAAAKGEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQGLSAAQVQLG 406 (490)
T ss_dssp HHHHHHHHHH---HHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cHHHHHHHHH---HHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 4567899999 999999999999999999999999999999999999999999988776665
No 9
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.57 E-value=1.3e-07 Score=68.81 Aligned_cols=62 Identities=13% Similarity=0.042 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcCCchhhhcccCCC
Q 033607 36 DCVKRWFRDTLKEAKGGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTRSSVWKVGEKHPG 100 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G~~~~~~~~~~~~ 100 (115)
+.|..||+ ++++.+++.++++||.+|..|.|+.+|+.+|+.||++|++.|+..+.....+..
T Consensus 203 ~~A~~~~~---~a~~~~~~~a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~l~~~~ 264 (273)
T 1ouv_A 203 KEALARYS---KACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDILKQLK 264 (273)
T ss_dssp HHHHHHHH---HHHHTTCHHHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHHHHH---HHHhCCCHHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 44556666 666666666666666666666666666666666666666666655554444433
No 10
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.42 E-value=6.8e-07 Score=64.93 Aligned_cols=60 Identities=20% Similarity=0.253 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcCCchhhhccc
Q 033607 35 SDCVKRWFRDTLKEAKGGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTRSSVWKVGEK 97 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G~~~~~~~~~ 97 (115)
.+.|..||+ ++++.+++.++++||.+|..|.|+..|+.+|+.||++|++.+++.+.+.++
T Consensus 58 ~~~A~~~~~---~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg 117 (273)
T 1ouv_A 58 LKKAASFYA---KACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLG 117 (273)
T ss_dssp HHHHHHHHH---HHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHH---HHHHCCCHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcCCccHHHHHH
Confidence 345666777 777777777777777777777777777777777777777766655544443
No 11
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=94.60 E-value=0.13 Score=30.08 Aligned_cols=47 Identities=13% Similarity=0.204 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+ ++... .++.+.+.||.+|.. ..++.+|+.+|+++.+..
T Consensus 25 ~~~A~~~~~---~a~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~~~ 73 (91)
T 1na3_A 25 YDEAIEYYQ---KALELDPNNAEAWYNLGNAYYK----QGDYDEAIEYYQKALELD 73 (91)
T ss_dssp HHHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH---HHHhcCCCCHHHHHHHHHHHHH----HhhHHHHHHHHHHHHhcC
Confidence 356888999 66554 588999999999985 569999999999998763
No 12
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=93.86 E-value=0.16 Score=33.88 Aligned_cols=54 Identities=15% Similarity=0.063 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcCCchhhhc
Q 033607 35 SDCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTRSSVWKVG 95 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G~~~~~~~ 95 (115)
.+.|..+|+ ++.+. .++.+.++||.+|.. ..++.+|+.+|++|.+.....+.+.
T Consensus 123 ~~~A~~~~~---~~l~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~p~~a~~~ 178 (184)
T 3vtx_A 123 HDKAIEAYE---KTISIKPGFIRAYQSIGLAYEG----KGLRDEAVKYFKKALEKEEKKAKYE 178 (184)
T ss_dssp HHHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHTTHHHHHHC
T ss_pred chhHHHHHH---HHHHhcchhhhHHHHHHHHHHH----CCCHHHHHHHHHHHHhCCccCHHHH
Confidence 356788888 55543 588999999999884 5689999999999988764444443
No 13
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=93.49 E-value=0.19 Score=31.27 Aligned_cols=46 Identities=7% Similarity=0.046 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 35 SDCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
.+.|..+|+ ++.+. .++.+.++||.+|.. ..++.+|+.+|++|.+.
T Consensus 23 ~~~A~~~~~---~al~~~p~~~~a~~~lg~~~~~----~g~~~~A~~~~~~al~l 70 (100)
T 3ma5_A 23 ASRALALFE---ELVETDPDYVGTYYHLGKLYER----LDRTDDAIDTYAQGIEV 70 (100)
T ss_dssp HHHHHHHHH---HHHHHSTTCTHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH---HHHHhCCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhh
Confidence 467889999 66554 578999999999985 56899999999999753
No 14
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=93.19 E-value=0.12 Score=33.05 Aligned_cols=31 Identities=16% Similarity=0.369 Sum_probs=27.0
Q ss_pred CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 53 DINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 53 d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
++.-++.||..++. .+|+.+|+.||++|.++
T Consensus 4 sa~dc~~lG~~~~~----~~~y~~A~~W~~~Al~~ 34 (104)
T 2v5f_A 4 TAEDCFELGKVAYT----EADYYHTELWMEQALRQ 34 (104)
T ss_dssp CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH----ccchHHHHHHHHHHHHh
Confidence 45678999999984 78999999999999875
No 15
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=92.47 E-value=0.13 Score=37.12 Aligned_cols=51 Identities=10% Similarity=0.050 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHc-CCCCcC------CHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAKGG--DINMQVLVGQMYFS-GYGVAR------DAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~G--d~~Aq~~LG~mY~~-G~Gv~k------D~~kA~~Wl~kAA~~G 88 (115)
.+.|+..|+ ++.+.. +..|.++||..|.. |.-++. ++.+|+..|++|.+..
T Consensus 62 ~~eAi~~le---~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~ 121 (158)
T 1zu2_A 62 IQEAITKFE---EALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQ 121 (158)
T ss_dssp HHHHHHHHH---HHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH---HHHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhC
Confidence 357888999 777765 89999999999974 332444 8999999999998764
No 16
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=92.23 E-value=0.42 Score=28.70 Aligned_cols=47 Identities=15% Similarity=0.004 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHC--CCHH-HHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAKG--GDIN-MQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~--Gd~~-Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+ ++... .++. +.++||.+|.. ..++.+|+.+|++|.+..
T Consensus 16 ~~~A~~~~~---~al~~~p~~~~~~~~~lg~~~~~----~~~~~~A~~~~~~al~~~ 65 (99)
T 2kc7_A 16 IENALQALE---EFLQTEPVGKDEAYYLMGNAYRK----LGDWQKALNNYQSAIELN 65 (99)
T ss_dssp HHHHHHHHH---HHHHHCSSTHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH---HHHHHCCCcHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcC
Confidence 466888998 65544 5778 99999999984 568999999999998765
No 17
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=92.20 E-value=0.41 Score=31.88 Aligned_cols=47 Identities=15% Similarity=0.169 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+ ++.+. .++.+.++||.+|.. ..++.+|+..|++|.+..
T Consensus 47 ~~~A~~~~~---~al~~~p~~~~a~~~lg~~~~~----~~~~~~A~~~~~~al~~~ 95 (150)
T 4ga2_A 47 YDLAKKYIC---TYINVQERDPKAHRFLGLLYEL----EENTDKAVECYRRSVELN 95 (150)
T ss_dssp HHHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH---HHHHhCCCCHHHHHHHHHHHHH----cCchHHHHHHHHHHHHhC
Confidence 356788888 65554 588899999998884 568889999999888754
No 18
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=92.04 E-value=0.59 Score=28.02 Aligned_cols=47 Identities=2% Similarity=-0.167 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+ ++.. -.++.+.+++|.+|.. ..++.+|+.+|++|.+..
T Consensus 20 ~~~A~~~~~---~al~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~ 68 (111)
T 2l6j_A 20 YREAVHCYD---QLITAQPQNPVGYSNKAMALIK----LGEYTQAIQMCQQGLRYT 68 (111)
T ss_dssp HHHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHH---HHHhcCCCCHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHhC
Confidence 466888999 6554 3588999999999985 569999999999998764
No 19
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=92.02 E-value=0.59 Score=27.59 Aligned_cols=48 Identities=6% Similarity=0.005 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcCC
Q 033607 35 SDCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTRS 89 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G~ 89 (115)
.+.|..+|+ ++... .+..+.+.+|.+|.. ..++.+|+.+|+++.+...
T Consensus 22 ~~~A~~~~~---~a~~~~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~a~~~~~ 71 (112)
T 2kck_A 22 YTESIDLFE---KAIQLDPEESKYWLMKGKALYN----LERYEEAVDCYNYVINVIE 71 (112)
T ss_dssp HHHHHHHHH---HHHHHCCCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHH---HHHHhCcCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCc
Confidence 456888888 65544 578899999999884 4589999999999987653
No 20
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=91.62 E-value=0.52 Score=30.58 Aligned_cols=46 Identities=11% Similarity=0.141 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 35 SDCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
.+.|..+|+ ++.+. .++.+.++||.+|.. ..++.+|+.+|++|.+.
T Consensus 24 ~~~A~~~y~---~Al~~~p~~~~~~~nlg~~~~~----~~~~~~A~~~~~~al~~ 71 (127)
T 4gcn_A 24 FEKAHVHYD---KAIELDPSNITFYNNKAAVYFE----EKKFAECVQFCEKAVEV 71 (127)
T ss_dssp HHHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH---HHHHhCCCCHHHHHhHHHHHHH----hhhHHHHHHHHHHHHHh
Confidence 467899999 66654 688999999999995 66999999999999864
No 21
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=91.22 E-value=0.51 Score=30.70 Aligned_cols=44 Identities=14% Similarity=-0.066 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 36 DCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
+.|..+|+ ++... .++.+.+.||.+|.. ..++.+|+.+|++|..
T Consensus 35 ~~A~~~~~---~al~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~ 80 (142)
T 2xcb_A 35 DDAQKIFQ---ALCMLDHYDARYFLGLGACRQS----LGLYEQALQSYSYGAL 80 (142)
T ss_dssp HHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHHHhCCccHHHHHHHHHHHHH----HhhHHHHHHHHHHHHh
Confidence 34555555 33322 345555555555542 3355555555555554
No 22
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=91.20 E-value=0.96 Score=26.60 Aligned_cols=47 Identities=6% Similarity=-0.063 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHC--C--CHHHHHHHHHHHHcCCCCc-CCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAKG--G--DINMQVLVGQMYFSGYGVA-RDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~--G--d~~Aq~~LG~mY~~G~Gv~-kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+ ++.+. . +..+.+.||.+|.. . .++.+|+.+|+++....
T Consensus 56 ~~~A~~~~~---~a~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~A~~~~~~~~~~~ 107 (112)
T 2kck_A 56 YEEAVDCYN---YVINVIEDEYNKDVWAAKADALRY----IEGKEVEAEIAEARAKLEH 107 (112)
T ss_dssp HHHHHHHHH---HHHHTSCCTTCHHHHHHHHHHHTT----CSSCSHHHHHHHHHHGGGC
T ss_pred HHHHHHHHH---HHHHhCcccchHHHHHHHHHHHHH----HhCCHHHHHHHHHHHhhcc
Confidence 356888999 66665 3 78999999999984 4 68999999999998765
No 23
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=91.18 E-value=0.65 Score=30.18 Aligned_cols=30 Identities=13% Similarity=-0.015 Sum_probs=14.1
Q ss_pred CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 53 DINMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 53 d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
++.+.++||.+|.. ..++.+|+.+|++|.+
T Consensus 80 ~~~a~~~lg~~~~~----~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 80 FIKGYIRKAACLVA----MREWSKAQRAYEDALQ 109 (126)
T ss_dssp CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHH----CCCHHHHHHHHHHHHH
Confidence 44455555554442 2344555555555443
No 24
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=91.14 E-value=0.67 Score=29.42 Aligned_cols=51 Identities=8% Similarity=0.165 Sum_probs=38.1
Q ss_pred hHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 34 VSDCVKRWFRDTLKEAKG------GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 34 ~~~~A~~wf~~~~kAA~~------Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
....|..||+..++.... ..+.....||.+|.. ..++.+|+..+++|.+..
T Consensus 20 ~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~----~g~~~~A~~~~~~al~l~ 76 (104)
T 2v5f_A 20 DYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQ----QGDLDKALLLTKKLLELD 76 (104)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred chHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHH----ccCHHHHHHHHHHHHhcC
Confidence 356799999944444322 356788999999984 558999999999998643
No 25
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=91.12 E-value=0.62 Score=28.86 Aligned_cols=45 Identities=11% Similarity=-0.048 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 36 DCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
+.|..+|+ ++... .++.+.+.||.+|.. ..++.+|+.+|+++.+.
T Consensus 36 ~~A~~~~~---~al~~~p~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~ 82 (115)
T 2kat_A 36 DAALPHLR---AALDFDPTYSVAWKWLGKTLQG----QGDRAGARQAWESGLAA 82 (115)
T ss_dssp HHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHHHHCCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHh
Confidence 56778888 55443 578888999998884 56888999999988653
No 26
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=90.92 E-value=0.53 Score=31.43 Aligned_cols=45 Identities=7% Similarity=-0.027 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 36 DCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
+.|..+|+ ++... .++.+.++||.+|.. ..++.+|+.+|++|.+.
T Consensus 72 ~~A~~~~~---~al~l~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 72 DLAIHSYS---YGAVMDIXEPRFPFHAAECLLQ----XGELAEAESGLFLAQEL 118 (148)
T ss_dssp HHHHHHHH---HHHHHSTTCTHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHHhcCCCCchHHHHHHHHHHH----cCCHHHHHHHHHHHHHH
Confidence 34555666 44332 456666666666653 44666666666666543
No 27
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=90.82 E-value=1.1 Score=27.37 Aligned_cols=46 Identities=9% Similarity=-0.025 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.|..+|+ ++... .+..+.+.+|.+|.. ..++.+|+.+|+++.+..
T Consensus 33 ~~A~~~~~---~al~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~a~~~~ 80 (133)
T 2lni_A 33 PQAMKHYT---EAIKRNPKDAKLYSNRAACYTK----LLEFQLALKDCEECIQLE 80 (133)
T ss_dssp HHHHHHHH---HHHTTCTTCHHHHHHHHHHHTT----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH---HHHHcCCCcHHHHHHHHHHHHH----hccHHHHHHHHHHHHHhC
Confidence 34667777 55544 367888888888763 557888888888887654
No 28
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=90.68 E-value=0.75 Score=30.34 Aligned_cols=44 Identities=7% Similarity=-0.099 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 36 DCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
+.|..+|+ ++... .++.+.++||.+|.. ..++.+|+.+|+++.+
T Consensus 62 ~~A~~~~~---~al~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~ 107 (164)
T 3sz7_A 62 EKAAEDAE---LATVVDPKYSKAWSRLGLARFD----MADYKGAKEAYEKGIE 107 (164)
T ss_dssp HHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHHHhCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHH
Confidence 34566666 44332 456667777776663 4466777777776654
No 29
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=90.42 E-value=0.83 Score=29.64 Aligned_cols=46 Identities=7% Similarity=-0.065 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 35 SDCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
.+.|..+|+ ++... .++.+.++||.+|.. ..++.+|+.+|+++.+.
T Consensus 68 ~~~A~~~~~---~al~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~ 115 (142)
T 2xcb_A 68 YEQALQSYS---YGALMDINEPRFPFHAAECHLQ----LGDLDGAESGFYSARAL 115 (142)
T ss_dssp HHHHHHHHH---HHHHHCTTCTHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH---HHHhcCCCCcHHHHHHHHHHHH----cCCHHHHHHHHHHHHHh
Confidence 356888999 66554 688999999999985 56999999999999865
No 30
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=90.35 E-value=0.81 Score=30.16 Aligned_cols=47 Identities=6% Similarity=-0.106 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+ ++.+. .++.+.++||.+|.. ..++.+|+.+|++|.+..
T Consensus 27 ~~~A~~~~~---~al~~~p~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~ 75 (164)
T 3sz7_A 27 YSKAIDLYT---QALSIAPANPIYLSNRAAAYSA----SGQHEKAAEDAELATVVD 75 (164)
T ss_dssp HHHHHHHHH---HHHHHSTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH---HHHHhCCcCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhC
Confidence 356888888 65554 589999999999985 569999999999998764
No 31
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=90.08 E-value=1.1 Score=26.65 Aligned_cols=30 Identities=13% Similarity=0.246 Sum_probs=14.7
Q ss_pred CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 53 DINMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 53 d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
++.+.+.||.+|.. ..++.+|+.+|+++.+
T Consensus 76 ~~~~~~~la~~~~~----~~~~~~A~~~~~~~~~ 105 (125)
T 1na0_A 76 NAEAWYNLGNAYYK----QGDYDEAIEYYQKALE 105 (125)
T ss_dssp CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH----hcCHHHHHHHHHHHHH
Confidence 44455555555442 2345555555555544
No 32
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=90.05 E-value=1.4 Score=26.77 Aligned_cols=47 Identities=9% Similarity=-0.163 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+ ++.. -.++.+.+.||.+|.. ..++.+|+.+|+++.+..
T Consensus 66 ~~~A~~~~~---~a~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~~~~~ 114 (133)
T 2lni_A 66 FQLALKDCE---ECIQLEPTFIKGYTRKAAALEA----MKDYTKAMDVYQKALDLD 114 (133)
T ss_dssp HHHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH---HHHHhCCCchHHHHHHHHHHHH----HhhHHHHHHHHHHHHHhC
Confidence 356888888 5554 3578999999999985 569999999999998764
No 33
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=89.96 E-value=1 Score=27.73 Aligned_cols=46 Identities=7% Similarity=0.071 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHC--CC---HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAKG--GD---INMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~--Gd---~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.|..+|+ ++... .+ +.+.+.||.+|.. ..++.+|+.+|+++....
T Consensus 56 ~~A~~~~~---~~~~~~p~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~~~~~~ 106 (129)
T 2xev_A 56 QLAEAQFR---DLVSRYPTHDKAAGGLLKLGLSQYG----EGKNTEAQQTLQQVATQY 106 (129)
T ss_dssp HHHHHHHH---HHHHHCTTSTTHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHH---HHHHHCCCCcccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHC
Confidence 55777887 55443 34 7788888888874 457888888888887653
No 34
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=89.93 E-value=0.89 Score=28.46 Aligned_cols=45 Identities=7% Similarity=0.097 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 36 DCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
+.|..+|+ ++.+. .++.+.++||.+|.. ..++.+|+.+|+++...
T Consensus 44 ~~A~~~~~---~al~~~p~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 44 RKAEAVLA---NGVKQFPNHQALRVFYAMVLYN----LGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHHHhCCCchHHHHHHHHHHHH----cCCHHHHHHHHHHHHHh
Confidence 45777887 55543 578888888888774 55788888888888765
No 35
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=89.89 E-value=1.1 Score=28.01 Aligned_cols=30 Identities=7% Similarity=-0.193 Sum_probs=14.2
Q ss_pred CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 53 DINMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 53 d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
++.+.+++|.+|.. ..++.+|+.+|++|.+
T Consensus 37 ~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~ 66 (126)
T 3upv_A 37 DARGYSNRAAALAK----LMSFPEAIADCNKAIE 66 (126)
T ss_dssp CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHH----hcCHHHHHHHHHHHHH
Confidence 44455555555442 2344555555555444
No 36
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=89.85 E-value=0.73 Score=32.29 Aligned_cols=46 Identities=11% Similarity=0.167 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 36 DCVKRWFRDTLKEAKGGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
+.|..+|+..++.. .++.+.++||.+|.. ..++.+|+.+|+++.+.
T Consensus 135 ~~A~~~~~~al~~~--~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~ 180 (217)
T 2pl2_A 135 DKAEASLKQALALE--DTPEIRSALAELYLS----MGRLDEALAQYAKALEQ 180 (217)
T ss_dssp HHHHHHHHHHHHHC--CCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcc--cchHHHHHHHHHHHH----cCCHHHHHHHHHHHHHh
Confidence 34555555332222 455666666666553 34566666666666543
No 37
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.69 E-value=1.1 Score=28.55 Aligned_cols=49 Identities=10% Similarity=-0.060 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcCCc
Q 033607 35 SDCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTRSS 90 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G~~ 90 (115)
.+.|..+|+ ++.. -.++.|.+.||.+++. ..++.+|+..|++..++...
T Consensus 25 ~~~A~~~l~---~AL~~dp~~~rA~~~lg~~~~~----~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 25 TDEVSLLLE---QALQLEPYNEAALSLIANDHFI----SFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp CHHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHTCCCT
T ss_pred CHHHHHHHH---HHHHHCcCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCC
Confidence 456888888 5544 4699999999999995 77999999999999887644
No 38
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=89.65 E-value=0.66 Score=31.81 Aligned_cols=44 Identities=11% Similarity=0.039 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 36 DCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
+.|..+|+ ++... .++.+.++||.+|.. ..++.+|+..|++|.+
T Consensus 53 ~eA~~~~~---~al~~~P~~~~~~~~lg~~~~~----~g~~~~Ai~~~~~al~ 98 (151)
T 3gyz_A 53 EEAEVFFR---FLCIYDFYNVDYIMGLAAIYQI----KEQFQQAADLYAVAFA 98 (151)
T ss_dssp HHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHHHhCCCCHHHHHHHHHHHHH----HccHHHHHHHHHHHHh
Confidence 44556665 44333 355666666666552 3456666666666654
No 39
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=89.45 E-value=0.35 Score=30.46 Aligned_cols=46 Identities=9% Similarity=0.143 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAKGG-----DINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~G-----d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.|..+|+ ++...+ ++.+.+.||.+|.. ..++.+|+.+|++|.+..
T Consensus 7 ~~A~~~~~---~al~~~~~~p~~~~~~~~lg~~~~~----~~~~~~A~~~~~~al~~~ 57 (117)
T 3k9i_A 7 AQAVPYYE---KAIASGLQGKDLAECYLGLGSTFRT----LGEYRKAEAVLANGVKQF 57 (117)
T ss_dssp CCCHHHHH---HHHSSCCCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH---HHHHcCCCCccHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 34778898 777663 56899999999984 669999999999998764
No 40
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=89.41 E-value=1 Score=29.16 Aligned_cols=47 Identities=9% Similarity=-0.055 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+ ++.+. .++.+.+++|.+|.. -.++.+|+.+|++|.+..
T Consensus 29 ~~~A~~~~~---~al~~~p~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~ 77 (126)
T 4gco_A 29 YPTAMRHYN---EAVKRDPENAILYSNRAACLTK----LMEFQRALDDCDTCIRLD 77 (126)
T ss_dssp HHHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH---HHHHhCCCCHHHHHHHhhHHHh----hccHHHHHHHHHHHHHhh
Confidence 456888999 66554 589999999999985 569999999999998754
No 41
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=89.33 E-value=1.5 Score=25.85 Aligned_cols=45 Identities=2% Similarity=-0.332 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 36 DCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
+.|..+|+ ++... .++.+.+.+|.+|.. ..++.+|+.+|+++.+.
T Consensus 55 ~~A~~~~~---~~~~~~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~~~~~ 101 (118)
T 1elw_A 55 QKAYEDGC---KTVDLKPDWGKGYSRKAAALEF----LNRFEEAKRTYEEGLKH 101 (118)
T ss_dssp HHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHH---HHHHhCcccHHHHHHHHHHHHH----HhhHHHHHHHHHHHHHc
Confidence 34555555 33332 356666666666653 34666666666666654
No 42
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=89.29 E-value=1.3 Score=27.65 Aligned_cols=47 Identities=4% Similarity=-0.112 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+ ++... .++.+.++||.+|.. ..++.+|+.+|+++.+..
T Consensus 54 ~~~A~~~~~---~al~~~p~~~~~~~~lg~~~~~----~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 54 FPEAIADCN---KAIEKDPNFVRAYIRKATAQIA----VKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH---HHHHhCCCcHHHHHHHHHHHHH----HhCHHHHHHHHHHHHHhC
Confidence 356888888 55544 578999999999985 569999999999998765
No 43
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=89.16 E-value=1.2 Score=26.86 Aligned_cols=47 Identities=17% Similarity=0.188 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+ ++... .++.+.+.+|.+|.. ..++.+|+.+|+++....
T Consensus 20 ~~~A~~~~~---~a~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~~~~~ 68 (131)
T 1elr_A 20 FDTALKHYD---KAKELDPTNMTYITNQAAVYFE----KGDYNKCRELCEKAIEVG 68 (131)
T ss_dssp HHHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH---HHHhcCCccHHHHHHHHHHHHH----hccHHHHHHHHHHHHhhc
Confidence 456888898 66554 578999999999984 669999999999998753
No 44
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=89.14 E-value=1.2 Score=27.55 Aligned_cols=44 Identities=7% Similarity=0.096 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 38 VKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 38 A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+..+|+ ++... .++.+.+.||.+|.. ..++.+|+.+|++|.+..
T Consensus 4 a~~~~~---~al~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~ 49 (115)
T 2kat_A 4 ITERLE---AMLAQGTDNMLLRFTLGKTYAE----HEQFDAALPHLRAALDFD 49 (115)
T ss_dssp HHHHHH---HHHTTTCCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHH---HHHHhCCCcHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHHC
Confidence 566777 66554 589999999999984 569999999999998764
No 45
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=88.92 E-value=1.3 Score=28.42 Aligned_cols=47 Identities=9% Similarity=-0.101 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+ ++... .++.+.+.||.+|.. ..++.+|+..|++|.+..
T Consensus 33 ~~~A~~~~~---~al~~~P~~~~a~~~lg~~~~~----~g~~~~A~~~~~~al~l~ 81 (121)
T 1hxi_A 33 LAEAALAFE---AVCQKEPEREEAWRSLGLTQAE----NEKDGLAIIALNHARMLD 81 (121)
T ss_dssp HHHHHHHHH---HHHHHSTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH---HHHHHCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 356888888 66554 589999999999984 568999999999998864
No 46
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.87 E-value=1.2 Score=27.79 Aligned_cols=47 Identities=9% Similarity=-0.072 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHHCCC-----HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAKGGD-----INMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~Gd-----~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+ ++.+... ..+.+++|.+|.. ..++.+|+.+|+++.+..
T Consensus 44 ~~~A~~~~~---~a~~~~~~~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~~~~~~ 95 (148)
T 2dba_A 44 YGGALAAYT---QALGLDATPQDQAVLHRNRAACHLK----LEDYDKAETEASKAIEKD 95 (148)
T ss_dssp HHHHHHHHH---HHHTSCCCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHH---HHHHHcccchHHHHHHHHHHHHHHH----HccHHHHHHHHHHHHhhC
Confidence 677888888 6665542 6778888888774 557888888888887653
No 47
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=88.80 E-value=1.2 Score=30.48 Aligned_cols=48 Identities=8% Similarity=-0.000 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcCC
Q 033607 35 SDCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTRS 89 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G~ 89 (115)
.+.|..+|+ ++... .++.+.++||.+|.. -.++.+|+..|++|.+...
T Consensus 86 ~~~Ai~~~~---~al~l~P~~~~~~~~lg~~~~~----lg~~~eA~~~~~~al~l~~ 135 (151)
T 3gyz_A 86 FQQAADLYA---VAFALGKNDYTPVFHTGQCQLR----LKAPLKAKECFELVIQHSN 135 (151)
T ss_dssp HHHHHHHHH---HHHHHSSSCCHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHH---HHHhhCCCCcHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCC
Confidence 356888998 66554 689999999999984 5699999999999987653
No 48
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=88.63 E-value=1.3 Score=29.04 Aligned_cols=46 Identities=7% Similarity=-0.099 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.|..+|+ ++.. -.++.+.+++|.+|.. -.++.+|+.+|++|.+..
T Consensus 80 ~~A~~~~~---~al~~~p~~~~a~~~~g~~~~~----~g~~~~A~~~~~~al~l~ 127 (162)
T 3rkv_A 80 HEAEETSS---EVLKREETNEKALFRRAKARIA----AWKLDEAEEDLKLLLRNH 127 (162)
T ss_dssp HHHHHHHH---HHHHHSTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH---HHHhcCCcchHHHHHHHHHHHH----HhcHHHHHHHHHHHHhcC
Confidence 45777888 5444 4689999999999984 569999999999998764
No 49
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=88.54 E-value=1.7 Score=25.80 Aligned_cols=47 Identities=13% Similarity=0.204 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+ ++... .+..+.+.+|.+|.. ..++.+|+.+|+++....
T Consensus 25 ~~~A~~~~~---~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~~~~~ 73 (125)
T 1na0_A 25 YDEAIEYYQ---KALELDPNNAEAWYNLGNAYYK----QGDYDEAIEYYQKALELD 73 (125)
T ss_dssp HHHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH---HHHHHCcCcHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHhC
Confidence 356788888 55443 578999999999985 569999999999998754
No 50
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=88.37 E-value=1.6 Score=27.13 Aligned_cols=30 Identities=13% Similarity=0.218 Sum_probs=15.9
Q ss_pred CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 53 DINMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 53 d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
++.+.+.||.+|.. ..++.+|+.+|+++.+
T Consensus 76 ~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~ 105 (137)
T 3q49_B 76 SVKAHFFLGQCQLE----MESYDEAIANLQRAYS 105 (137)
T ss_dssp CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH----HhhHHHHHHHHHHHHH
Confidence 45555555555553 3355555555555544
No 51
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=88.27 E-value=1.5 Score=25.82 Aligned_cols=47 Identities=13% Similarity=-0.028 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+ ++... .++.+.+.+|.+|.. ..++.+|+.+|+++.+..
T Consensus 20 ~~~A~~~~~---~~~~~~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~~~~~~ 68 (118)
T 1elw_A 20 IDDALQCYS---EAIKLDPHNHVLYSNRSAAYAK----KGDYQKAYEDGCKTVDLK 68 (118)
T ss_dssp HHHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH---HHHHHCCCcHHHHHHHHHHHHh----hccHHHHHHHHHHHHHhC
Confidence 456888888 65443 589999999999984 679999999999998765
No 52
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=87.93 E-value=1.7 Score=29.76 Aligned_cols=49 Identities=10% Similarity=0.032 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAKGGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.|..+|+..++.....+..+.+++|.+|.. ..++.+|+.+|++|.+..
T Consensus 24 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~ 72 (228)
T 4i17_A 24 AVAFEKYSEYLKLTNNQDSVTAYNCGVCADN----IKKYKEAADYFDIAIKKN 72 (228)
T ss_dssp HHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhccCCCCcHHHHHHHHHHHH----hhcHHHHHHHHHHHHHhC
Confidence 3455555522222111345555566666553 345666666666665443
No 53
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=87.91 E-value=1.8 Score=26.96 Aligned_cols=47 Identities=6% Similarity=-0.084 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+ ++.. -.++.+.++||.+|.. ..++.+|+.+|+++....
T Consensus 25 ~~~A~~~~~---~al~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~al~~~ 73 (137)
T 3q49_B 25 YPEAAACYG---RAITRNPLVAVYYTNRALCYLK----MQQPEQALADCRRALELD 73 (137)
T ss_dssp HHHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH---HHHhhCcCcHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHhC
Confidence 356788888 5554 3578999999999984 679999999999998754
No 54
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=87.89 E-value=1.5 Score=29.73 Aligned_cols=46 Identities=9% Similarity=-0.031 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.|..+|+ ++.. -.++.+.+++|.+|.. ..++.+|+.+|++|.+..
T Consensus 105 ~~A~~~~~---~al~~~p~~~~~~~~lg~~~~~----~~~~~~A~~~~~~al~~~ 152 (198)
T 2fbn_A 105 PKAIDHAS---KVLKIDKNNVKALYKLGVANMY----FGFLEEAKENLYKAASLN 152 (198)
T ss_dssp HHHHHHHH---HHHHHSTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHH---HHHHhCcccHHHHHHHHHHHHH----cccHHHHHHHHHHHHHHC
Confidence 45778888 4443 4688999999999984 669999999999998764
No 55
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=87.89 E-value=0.95 Score=27.32 Aligned_cols=49 Identities=8% Similarity=0.222 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHC--CC----HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAKG--GD----INMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~--Gd----~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.|..+|+..++.... .+ ..+.+.||.+|.. ..++.+|+.+|+++.+..
T Consensus 55 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~~~~~ 109 (131)
T 1elr_A 55 NKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFK----EEKYKDAIHFYNKSLAEH 109 (131)
T ss_dssp HHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHH----hccHHHHHHHHHHHHHhC
Confidence 5577888844433321 12 8899999999985 569999999999998864
No 56
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=87.78 E-value=1.2 Score=30.86 Aligned_cols=47 Identities=4% Similarity=0.060 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+ ++.+. .++.+.++||.+|.. ..++.+|+.+|+++.+..
T Consensus 70 ~~~A~~~~~---~al~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~ 118 (208)
T 3urz_A 70 YDKAYLFYK---ELLQKAPNNVDCLEACAEMQVC----RGQEKDALRMYEKILQLE 118 (208)
T ss_dssp HHHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH---HHHHHCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHcC
Confidence 356888998 66654 589999999999984 679999999999998754
No 57
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=87.74 E-value=1.6 Score=28.96 Aligned_cols=47 Identities=9% Similarity=-0.107 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+ ++.. -.++.+.+.||.+|.. ..++.+|+.+|++|....
T Consensus 37 ~~~A~~~~~---~al~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~l~ 85 (148)
T 2vgx_A 37 YEDAHXVFQ---ALCVLDHYDSRFFLGLGACRQA----MGQYDLAIHSYSYGAVMD 85 (148)
T ss_dssp HHHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHH---HHHHcCcccHHHHHHHHHHHHH----HhhHHHHHHHHHHHHhcC
Confidence 356788888 6554 4589999999999984 569999999999998753
No 58
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=87.59 E-value=2.1 Score=25.63 Aligned_cols=45 Identities=7% Similarity=-0.105 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 36 DCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
+.|..+|+ ++.. ..++.+.+.+|.+|.. ..++.+|+.+|+++.+.
T Consensus 63 ~~A~~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 63 AGAVQDCE---RAICIDPAYSKAYGRMGLALSS----LNKHVEAVAYYKKALEL 109 (131)
T ss_dssp HHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHHhcCccCHHHHHHHHHHHHH----hCCHHHHHHHHHHHHhc
Confidence 34555555 3333 2456666666666663 34666777777666654
No 59
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=86.81 E-value=3.3 Score=24.56 Aligned_cols=47 Identities=13% Similarity=0.202 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+ ++.. ..+..+.+.+|.+|.. ..++.+|+.+|+++....
T Consensus 51 ~~~A~~~~~---~~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~~~~~~ 99 (136)
T 2fo7_A 51 YDEAIEYYQ---KALELDPRSAEAWYNLGNAYYK----QGDYDEAIEYYQKALELD 99 (136)
T ss_dssp HHHHHHHHH---HHHHHCTTCHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH---HHHHHCCCchHHHHHHHHHHHH----hcCHHHHHHHHHHHHHhC
Confidence 456777777 4443 3466777778877763 457788888888777654
No 60
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=86.79 E-value=2.1 Score=27.10 Aligned_cols=45 Identities=2% Similarity=-0.216 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 36 DCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
+.|..+|+ ++.. ..++.+.+.+|.+|.. ..++.+|+.+|+++.+.
T Consensus 64 ~~A~~~~~---~a~~~~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~a~~~ 110 (166)
T 1a17_A 64 GYALGDAT---RAIELDKKYIKGYYRRAASNMA----LGKFRAALRDYETVVKV 110 (166)
T ss_dssp HHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHHHhCcccHHHHHHHHHHHHH----hccHHHHHHHHHHHHHh
Confidence 44566666 4333 2466677777777663 34677777777777654
No 61
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=86.79 E-value=0.45 Score=31.70 Aligned_cols=50 Identities=6% Similarity=0.090 Sum_probs=39.0
Q ss_pred hhhHHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 32 EVVSDCVKRWFRDTLKEAKGG--DINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 32 ~~~~~~A~~wf~~~~kAA~~G--d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
....+.|+..|+ ++.... ++.+.+.||.+|.. ..++.+|+.+|++|.+..
T Consensus 10 ~~~~e~ai~~~~---~a~~~~p~~~~~~~~la~~y~~----~~~~~~A~~~~~~al~~~ 61 (150)
T 4ga2_A 10 KADVERYIASVQ---GSTPSPRQKSIKGFYFAKLYYE----AKEYDLAKKYICTYINVQ 61 (150)
T ss_dssp HHHHHHHHHHHH---HHSCSHHHHHTTHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred cChHHHHHHHHH---HhcccCcccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 344567888888 665543 45677999999995 679999999999998764
No 62
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=86.77 E-value=2.6 Score=27.09 Aligned_cols=48 Identities=8% Similarity=0.144 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHCC------CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 36 DCVKRWFRDTLKEAKGG------DINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~G------d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
+.|..+|+..++-.... -..+.++||.+|.. ..++.+|+.+|++|...
T Consensus 59 ~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~----~~~~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 59 AECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQK----QNDLSLAVQWFHRSLSE 112 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhh
Confidence 56788888333222111 13588899999884 67999999999999763
No 63
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=86.69 E-value=0.93 Score=29.12 Aligned_cols=46 Identities=7% Similarity=-0.078 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.|...|+ ++.+. .++.+.+.||.+|.. ..++.+|+.+|+++.+..
T Consensus 68 ~~A~~~~~---~al~l~P~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~ 115 (121)
T 1hxi_A 68 GLAIIALN---HARMLDPKDIAVHAALAVSHTN----EHNANAALASLRAWLLSQ 115 (121)
T ss_dssp HHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHH---HHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 56788888 76665 589999999999984 668999999999998653
No 64
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=86.22 E-value=2.1 Score=28.71 Aligned_cols=45 Identities=9% Similarity=0.027 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 36 DCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
+.|..+|+ ++.. ..++.+.++||.+|.. ..++.+|+.+|+++.+.
T Consensus 54 ~~A~~~~~---~al~~~~~~~~~~~~lg~~~~~----~~~~~~A~~~~~~al~~ 100 (213)
T 1hh8_A 54 TEAEKAFT---RSINRDKHLAVAYFQRGMLYYQ----TEKYDLAIKDLKEALIQ 100 (213)
T ss_dssp HHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHH---HHHHhCccchHHHHHHHHHHHH----cccHHHHHHHHHHHHHh
Confidence 55778888 5544 4688899999999885 56899999999999874
No 65
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=85.92 E-value=2.7 Score=25.78 Aligned_cols=47 Identities=15% Similarity=0.181 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHH--CCCH---HHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAK--GGDI---NMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~--~Gd~---~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+ ++.. -.++ .+.+.+|.+|.. ..++.+|+.+|+++....
T Consensus 18 ~~~A~~~~~---~~~~~~p~~~~~~~~~~~lg~~~~~----~~~~~~A~~~~~~~~~~~ 69 (129)
T 2xev_A 18 YDDASQLFL---SFLELYPNGVYTPNALYWLGESYYA----TRNFQLAEAQFRDLVSRY 69 (129)
T ss_dssp HHHHHHHHH---HHHHHCSSSTTHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH---HHHHHCCCCcccHHHHHHHHHHHHH----hccHHHHHHHHHHHHHHC
Confidence 456888888 5544 2455 799999999985 679999999999998754
No 66
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.72 E-value=4.6 Score=24.95 Aligned_cols=46 Identities=15% Similarity=0.100 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.|..+|+ ++.. -.++.+.+++|.+|.. ..++.+|+.+|+++.+..
T Consensus 82 ~~A~~~~~---~~~~~~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~ 129 (148)
T 2dba_A 82 DKAETEAS---KAIEKDGGDVKALYRRSQALEK----LGRLDQAVLDLQRCVSLE 129 (148)
T ss_dssp HHHHHHHH---HHHHHTSCCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH---HHHhhCccCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHcC
Confidence 45777887 5444 3578999999999885 568999999999998754
No 67
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=85.58 E-value=2.8 Score=25.00 Aligned_cols=46 Identities=9% Similarity=-0.034 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.|..+|+ ++... .++.+.+.+|.+|.. ..++.+|+.+|+++.+..
T Consensus 29 ~~A~~~~~---~~~~~~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~~~~~~ 76 (131)
T 2vyi_A 29 EAAVHFYG---KAIELNPANAVYFCNRAAAYSK----LGNYAGAVQDCERAICID 76 (131)
T ss_dssp HHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH---HHHHcCCCCHHHHHHHHHHHHH----hhchHHHHHHHHHHHhcC
Confidence 55778888 55443 578999999999985 568999999999998754
No 68
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=85.50 E-value=2.6 Score=27.71 Aligned_cols=31 Identities=10% Similarity=0.075 Sum_probs=16.9
Q ss_pred CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 53 DINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 53 d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
++.+.+.||.+|.. ..++.+|+.+|+++.+.
T Consensus 114 ~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~ 144 (177)
T 2e2e_A 114 EITALMLLASDAFM----QANYAQAIELWQKVMDL 144 (177)
T ss_dssp CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHH----cccHHHHHHHHHHHHhh
Confidence 45555555555553 34555566555555543
No 69
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=85.47 E-value=2.7 Score=26.60 Aligned_cols=47 Identities=6% Similarity=-0.062 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+ ++.. ..+..+.+.+|.+|.. ..++.+|+.+|+++.+..
T Consensus 29 ~~~A~~~~~---~al~~~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~a~~~~ 77 (166)
T 1a17_A 29 YENAIKFYS---QAIELNPSNAIYYGNRSLAYLR----TECYGYALGDATRAIELD 77 (166)
T ss_dssp HHHHHHHHH---HHHHHSTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH---HHHHhCCCChHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 355778888 5544 3578999999999985 569999999999998764
No 70
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=85.29 E-value=3.1 Score=27.36 Aligned_cols=49 Identities=12% Similarity=0.161 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcCCc
Q 033607 35 SDCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTRSS 90 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G~~ 90 (115)
.+.|..+|+ ++.+. .++.+.+.||.+|.. ..++.+|+.+++++......
T Consensus 21 ~~~A~~~~~---~al~~~p~~~~~~~~la~~~~~----~~~~~~a~~~~~~~~~~~~~ 71 (184)
T 3vtx_A 21 FDGAIRAYK---KVLKADPNNVETLLKLGKTYMD----IGLPNDAIESLKKFVVLDTT 71 (184)
T ss_dssp HHHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHH---HHHHhCCCCHHHHHHHHHHHHH----CCCHHHHHHHHHHHHhcCch
Confidence 467889999 66554 689999999999985 56899999999998775543
No 71
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=84.77 E-value=4.2 Score=27.68 Aligned_cols=54 Identities=7% Similarity=-0.020 Sum_probs=38.1
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 27 RVPLSEVVSDCVKRWFRDTLKEAKGG---DINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 27 ~~pl~~~~~~~A~~wf~~~~kAA~~G---d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
...........|..+++ +..... .+.+.+.||.+|.. ..++.+|+.+|++|.+.
T Consensus 16 ~~~~A~~~~~~al~~~~---~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~ 72 (283)
T 3edt_B 16 PRGSAVPLCKQALEDLE---KTSGHDHPDVATMLNILALVYRD----QNKYKEAAHLLNDALAI 72 (283)
T ss_dssp CSSSHHHHHHHHHHHHH---HHHCSSSHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH---HhcCCCCHHHHHHHHHHHHHHHH----cccHHHHHHHHHHHHHH
Confidence 33344445556666666 444333 46789999999984 56999999999999865
No 72
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=84.73 E-value=1.4 Score=27.11 Aligned_cols=33 Identities=12% Similarity=0.052 Sum_probs=29.0
Q ss_pred CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 52 GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 52 Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.++.+.+.||.+|.. ..++.+|+.+|++|.+..
T Consensus 5 ~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~ 37 (100)
T 3ma5_A 5 EDPFTRYALAQEHLK----HDNASRALALFEELVETD 37 (100)
T ss_dssp CCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHS
T ss_pred cCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 578899999999985 569999999999998865
No 73
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=84.09 E-value=2.5 Score=29.71 Aligned_cols=45 Identities=11% Similarity=0.144 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHC--CC---HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 36 DCVKRWFRDTLKEAKG--GD---INMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~--Gd---~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
+.|..+|+ ++... .+ +.+.+.||.+|.. ..++.+|+.+|+++.+.
T Consensus 32 ~~A~~~~~---~~l~~~p~~~~~~~a~~~lg~~~~~----~~~~~~A~~~~~~~l~~ 81 (261)
T 3qky_A 32 DRAIEYFK---AVFTYGRTHEWAADAQFYLARAYYQ----NKEYLLAASEYERFIQI 81 (261)
T ss_dssp HHHHHHHH---HHGGGCSCSTTHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHHHhCCCCcchHHHHHHHHHHHHH----hCcHHHHHHHHHHHHHH
Confidence 56888888 66654 45 8899999999985 67999999999999986
No 74
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=83.51 E-value=3.1 Score=28.95 Aligned_cols=49 Identities=8% Similarity=0.032 Sum_probs=39.8
Q ss_pred hhHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 33 VVSDCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 33 ~~~~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
...+.|...|+ ++.+. .++.+.++||.+|.. ..++.+|+.+|++|.+..
T Consensus 98 g~~~~A~~~~~---~al~~~P~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~ 148 (217)
T 2pl2_A 98 GYLEQALSVLK---DAERVNPRYAPLHLQRGLVYAL----LGERDKAEASLKQALALE 148 (217)
T ss_dssp HHHHHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHH---HHHHhCcccHHHHHHHHHHHHH----cCChHHHHHHHHHHHhcc
Confidence 34466888888 66554 689999999999984 669999999999998765
No 75
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=83.19 E-value=2.9 Score=32.47 Aligned_cols=46 Identities=4% Similarity=-0.082 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.|..+|+ ++.+. .++.+.++||.+|.. ..++.+|+.+|++|.+..
T Consensus 290 ~~A~~~~~---~al~~~p~~~~a~~~lg~~~~~----~g~~~eA~~~l~~Al~l~ 337 (370)
T 1ihg_A 290 QGAVDSCL---EALEIDPSNTKALYRRAQGWQG----LKEYDQALADLKKAQEIA 337 (370)
T ss_dssp HHHHHHHH---HHHTTCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH---HHHHhCchhHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhC
Confidence 55778888 66654 588999999999985 569999999999998764
No 76
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=83.06 E-value=2.9 Score=28.24 Aligned_cols=47 Identities=9% Similarity=0.003 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 35 SDCVKRWFRDTLKEAKGGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
.+.|..+|+..++.. .++.+.+.+|.+|.. ..++.+|+.+|+++.+.
T Consensus 21 ~~~A~~~~~~a~~~~--~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~~ 67 (258)
T 3uq3_A 21 FDEAIEHYNKAWELH--KDITYLNNRAAAEYE----KGEYETAISTLNDAVEQ 67 (258)
T ss_dssp HHHHHHHHHHHHHHS--CCTHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH----cccHHHHHHHHHHHHHh
Confidence 456888898555554 788999999999985 56999999999999874
No 77
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=82.97 E-value=3.2 Score=28.34 Aligned_cols=47 Identities=11% Similarity=0.041 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAKGG--DINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~G--d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+ ++.+.. ++.+.+.||.+|.. ..++.+|+.+|+++.+..
T Consensus 58 ~~~A~~~~~---~al~~~p~~~~~~~~l~~~~~~----~~~~~~A~~~~~~al~~~ 106 (228)
T 4i17_A 58 YKEAADYFD---IAIKKNYNLANAYIGKSAAYRD----MKNNQEYIATLTEGIKAV 106 (228)
T ss_dssp HHHHHHHHH---HHHHTTCSHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHH---HHHHhCcchHHHHHHHHHHHHH----cccHHHHHHHHHHHHHHC
Confidence 356888999 777654 78899999999985 569999999999998754
No 78
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=82.27 E-value=5.8 Score=23.43 Aligned_cols=46 Identities=13% Similarity=0.220 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.|..+|+ ++.. ..+..+.+.+|.+|.. ..++.+|+.+|+++....
T Consensus 18 ~~A~~~~~---~~~~~~~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~~~~~~ 65 (136)
T 2fo7_A 18 DEAIEYYQ---KALELDPRSAEAWYNLGNAYYK----QGDYDEAIEYYQKALELD 65 (136)
T ss_dssp HHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH---HHHHcCCcchhHHHHHHHHHHH----hcCHHHHHHHHHHHHHHC
Confidence 45666666 4333 2456666666666653 346667777777666543
No 79
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=82.22 E-value=6 Score=24.20 Aligned_cols=47 Identities=17% Similarity=0.217 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHC-CC----HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 36 DCVKRWFRDTLKEAKG-GD----INMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~-Gd----~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
+.|..+|+..++.+.. ++ ..+.++||.+|.. ..++.+|+.+|++|..
T Consensus 66 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~ 117 (164)
T 3ro3_A 66 ETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTL----LQDYEKAIDYHLKHLA 117 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH----HhhHHHHHHHHHHHHH
Confidence 4567777744443332 33 5677888888874 5688899998888865
No 80
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=81.99 E-value=1.8 Score=29.13 Aligned_cols=46 Identities=11% Similarity=0.070 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAKGGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|...|+ ++. ..++.+.++||.+|.. ..++.+|+.+|++|....
T Consensus 22 ~~~A~~~~~---~a~-~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~ 67 (213)
T 1hh8_A 22 WKGALDAFS---AVQ-DPHSRICFNIGCMYTI----LKNMTEAEKAFTRSINRD 67 (213)
T ss_dssp HHHHHHHHH---TSS-SCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH---HHc-CCChHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 356778888 654 4488999999999984 669999999999998754
No 81
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=81.77 E-value=4.1 Score=27.97 Aligned_cols=30 Identities=7% Similarity=-0.105 Sum_probs=15.0
Q ss_pred CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 53 DINMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 53 d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
++.+.+.||.+|.. ..++.+|+.+|++|.+
T Consensus 76 ~~~~~~~la~~~~~----~~~~~~A~~~~~~al~ 105 (275)
T 1xnf_A 76 MPEVFNYLGIYLTQ----AGNFDAAYEAFDSVLE 105 (275)
T ss_dssp CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH----ccCHHHHHHHHHHHHh
Confidence 44555555555542 3355555555555544
No 82
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=81.56 E-value=3.5 Score=31.19 Aligned_cols=46 Identities=9% Similarity=-0.032 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.|..+|+ ++.+. .++.+.+++|.+|.. ..++.+|+.+|++|.+..
T Consensus 213 ~~A~~~~~---~al~~~p~~~~a~~~lg~~~~~----~g~~~~A~~~~~~al~l~ 260 (336)
T 1p5q_A 213 SAAIESCN---KALELDSNNEKGLSRRGEAHLA----VNDFELARADFQKVLQLY 260 (336)
T ss_dssp HHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH---HHHHhCCCcHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHC
Confidence 55778888 55543 589999999999985 569999999999998754
No 83
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=81.44 E-value=2.8 Score=27.35 Aligned_cols=50 Identities=16% Similarity=0.169 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHH-----------------HCCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEA-----------------KGGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA-----------------~~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+..++.. ...++.+.++||.+|.. ..++.+|+.+|++|.+..
T Consensus 27 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~----~~~~~~A~~~~~~al~~~ 93 (162)
T 3rkv_A 27 YKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN----IGDLHEAEETSSEVLKRE 93 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh----cCcHHHHHHHHHHHHhcC
Confidence 356788888333331 33456899999999984 569999999999998764
No 84
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=81.20 E-value=5.1 Score=25.34 Aligned_cols=32 Identities=9% Similarity=-0.090 Sum_probs=16.8
Q ss_pred CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 52 GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 52 Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
.++.+.+.+|.+|.. ..++.+|+.+|+++.+.
T Consensus 108 ~~~~~~~~~a~~~~~----~~~~~~A~~~~~~~~~~ 139 (186)
T 3as5_A 108 INFNVRFRLGVALDN----LGRFDEAIDSFKIALGL 139 (186)
T ss_dssp TCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHH----cCcHHHHHHHHHHHHhc
Confidence 345555555555552 33555555555555543
No 85
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=80.78 E-value=4.9 Score=27.09 Aligned_cols=30 Identities=13% Similarity=0.124 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 55 NMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 55 ~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.++||.+|.. ..++.+|+.+|++|....
T Consensus 89 ~~~~~la~~~~~----~~~~~~A~~~~~~al~~~ 118 (198)
T 2fbn_A 89 SCNLNLATCYNK----NKDYPKAIDHASKVLKID 118 (198)
T ss_dssp HHHHHHHHHHHH----TTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHH----hcCHHHHHHHHHHHHHhC
Confidence 889999999985 569999999999998754
No 86
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=80.78 E-value=3 Score=31.12 Aligned_cols=46 Identities=11% Similarity=0.134 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHH--------CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 35 SDCVKRWFRDTLKEAK--------GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~--------~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
.+.|..+|+ ++.. ...+.+.++||.+|.. ..++.+|..+|++|.+.
T Consensus 240 ~~~A~~~~~---~al~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~ 293 (383)
T 3ulq_A 240 YEDAIPYFK---RAIAVFEESNILPSLPQAYFLITQIHYK----LGKIDKAHEYHSKGMAY 293 (383)
T ss_dssp HHHHHHHHH---HHHHHHHHTTCGGGHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH---HHHHHHHhhccchhHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHH
Confidence 356788888 5544 3356788999999884 55899999999988753
No 87
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=80.67 E-value=3.1 Score=33.03 Aligned_cols=49 Identities=8% Similarity=-0.014 Sum_probs=39.8
Q ss_pred hhHHHHHHHHHHHHHHHHC-----CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 33 VVSDCVKRWFRDTLKEAKG-----GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 33 ~~~~~A~~wf~~~~kAA~~-----Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
...+.|..+|+ ++... .++.+.++||.+|.. ..++.+|+.+|++|.+..
T Consensus 235 g~~~~A~~~~~---~al~~~p~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~l~ 288 (474)
T 4abn_A 235 KISQQALSAYA---QAEKVDRKASSNPDLHLNRATLHKY----EESYGEALEGFSQAAALD 288 (474)
T ss_dssp HHHHHHHHHHH---HHHHHCGGGGGCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred chHHHHHHHHH---HHHHhCCCcccCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 34567888999 65552 689999999999995 569999999999998754
No 88
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=80.54 E-value=6.2 Score=28.49 Aligned_cols=48 Identities=6% Similarity=-0.130 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHCC-C----HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 36 DCVKRWFRDTLKEAKGG-D----INMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~G-d----~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
+.|..+|++.++-+..- + +.+.+++|.+|.. ..+++++|..+|++|..
T Consensus 213 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~---~g~~~~~A~~~~~~Al~ 265 (293)
T 3u3w_A 213 EESLYQVNKAIEISCRINSMALIGQLYYQRGECLRK---LEYEEAEIEDAYKKASF 265 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHH---TTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH---hCCcHHHHHHHHHHHHH
Confidence 56788888555544332 2 7899999999985 33467999999999964
No 89
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=80.24 E-value=3.8 Score=25.15 Aligned_cols=49 Identities=14% Similarity=0.032 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHC-CCH----HHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 35 SDCVKRWFRDTLKEAKG-GDI----NMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~-Gd~----~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
.+.|..+|+..++.+.. ++. .+.+.||.+|.. ..++.+|+.+|++|.+.
T Consensus 25 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~a~~~ 78 (164)
T 3ro3_A 25 FRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIF----LGEFETASEYYKKTLLL 78 (164)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHH
Confidence 35677788744444332 332 588899999985 56999999999998763
No 90
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=79.71 E-value=3.8 Score=28.29 Aligned_cols=47 Identities=13% Similarity=0.181 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHCC--CHHHHHH----------------HHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAKGG--DINMQVL----------------VGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~G--d~~Aq~~----------------LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+ ++.... ++.+.+. ||.+|.. ..++.+|+.+|++|.+..
T Consensus 20 ~~~A~~~~~---~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~ 84 (208)
T 3urz_A 20 NGQAVSYFR---QTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKK----NRNYDKAYLFYKELLQKA 84 (208)
T ss_dssp HHHHHHHHH---HHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH---HHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHC
Confidence 467888998 666553 6778888 9999984 569999999999998764
No 91
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=79.70 E-value=3.6 Score=28.02 Aligned_cols=48 Identities=10% Similarity=0.008 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHH-------CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 36 DCVKRWFRDTLKEAK-------GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~-------~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
+.|..+|+..++.+. .....+.+.||.+|.. ..++.+|+.+|++|.+.
T Consensus 60 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~ 114 (283)
T 3edt_B 60 KEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGK----RGKYKEAEPLCKRALEI 114 (283)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHH----hccHHHHHHHHHHHHHH
Confidence 457788884444331 2346788999999984 66999999999999875
No 92
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=79.66 E-value=6.3 Score=24.86 Aligned_cols=45 Identities=9% Similarity=0.009 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 36 DCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
+.|..+|+ ++... .++.+.+.||.+|.. ..++.+|+.+|+++.+.
T Consensus 127 ~~A~~~~~---~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~~~~ 173 (186)
T 3as5_A 127 DEAIDSFK---IALGLRPNEGKVHRAIAFSYEQ----MGRHEEALPHFKKANEL 173 (186)
T ss_dssp HHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHHhcCccchHHHHHHHHHHHH----cCCHHHHHHHHHHHHHc
Confidence 56778888 54443 578999999999985 56999999999999764
No 93
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=79.50 E-value=2.7 Score=30.08 Aligned_cols=48 Identities=8% Similarity=0.070 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHH-HCCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 37 CVKRWFRDTLKEA-KGGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 37 ~A~~wf~~~~kAA-~~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.++..|+++++.. ...+.++.|+||..|.. -+|+.+|+.+++++.+..
T Consensus 53 ~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~k----l~~Y~~A~~y~~~lL~ie 101 (152)
T 1pc2_A 53 KGIVLLEELLPKGSKEEQRDYVFYLAVGNYR----LKEYEKALKYVRGLLQTE 101 (152)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH----TSCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCCccchHHHHHHHHHHHHH----ccCHHHHHHHHHHHHhcC
Confidence 5667777444432 11246778888887763 568888888888776543
No 94
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=79.47 E-value=5.6 Score=27.28 Aligned_cols=47 Identities=6% Similarity=-0.101 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+ ++.. ..++.+.+.||.+|.. ..++.+|+.+|+++.+..
T Consensus 93 ~~~A~~~~~---~al~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~a~~~~ 141 (275)
T 1xnf_A 93 FDAAYEAFD---SVLELDPTYNYAHLNRGIALYY----GGRDKLAQDDLLAFYQDD 141 (275)
T ss_dssp HHHHHHHHH---HHHHHCTTCTHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH---HHHhcCccccHHHHHHHHHHHH----hccHHHHHHHHHHHHHhC
Confidence 356788888 6655 3578999999999985 568999999999998754
No 95
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=79.12 E-value=2.3 Score=24.40 Aligned_cols=32 Identities=13% Similarity=0.197 Sum_probs=26.4
Q ss_pred CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 53 DINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 53 d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
++.+.+.+|.+|.. ..++.+|+.+|++|.+..
T Consensus 8 ~~~~~~~la~~~~~----~~~~~~A~~~~~~a~~~~ 39 (91)
T 1na3_A 8 SAEAWYNLGNAYYK----QGDYDEAIEYYQKALELD 39 (91)
T ss_dssp HHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHH----ccCHHHHHHHHHHHHhcC
Confidence 45678889999884 569999999999998754
No 96
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=78.80 E-value=5.3 Score=31.65 Aligned_cols=46 Identities=4% Similarity=-0.075 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.|..+|+ ++.+ -.++.+.+++|.+|.. ..++.+|+.+|++|.+..
T Consensus 334 ~~A~~~~~---~al~~~p~~~~a~~~~g~a~~~----~g~~~~A~~~~~~al~l~ 381 (457)
T 1kt0_A 334 TKAVECCD---KALGLDSANEKGLYRRGEAQLL----MNEFESAKGDFEKVLEVN 381 (457)
T ss_dssp HHHHHHHH---HHHHHSTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHH---HHHhcCCccHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhC
Confidence 45777888 5544 4689999999999985 569999999999998764
No 97
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=78.74 E-value=4.6 Score=30.60 Aligned_cols=45 Identities=9% Similarity=-0.073 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 36 DCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
+.|..+|+ ++.+ -.++.+.+++|.+|.. ..++.+|+.+|++|.+.
T Consensus 247 ~~A~~~~~---~al~~~p~~~~a~~~lg~a~~~----~g~~~~A~~~l~~al~l 293 (338)
T 2if4_A 247 DEAIGHCN---IVLTEEEKNPKALFRRGKAKAE----LGQMDSARDDFRKAQKY 293 (338)
T ss_dssp HHHHHHHH---HHHHHCTTCHHHHHHHHHHHHT----TTCHHHHHHHHHHTTC-
T ss_pred HHHHHHHH---HHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHH
Confidence 45777888 5544 4689999999999984 56999999999999754
No 98
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=78.47 E-value=7.7 Score=26.08 Aligned_cols=50 Identities=10% Similarity=0.144 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHCCC------HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAKGGD------INMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~Gd------~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+..++...... +.+.+.||.+|.. ..++.+|+.+|+++....
T Consensus 54 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~~~ 109 (258)
T 3uq3_A 54 YETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHK----LGDLKKTIEYYQKSLTEH 109 (258)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHH----cccHHHHHHHHHHHHhcC
Confidence 3567888883333332222 7899999999984 669999999999998843
No 99
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=78.12 E-value=2.7 Score=27.61 Aligned_cols=30 Identities=17% Similarity=0.241 Sum_probs=15.0
Q ss_pred CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 53 DINMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 53 d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
++.+.+.||.+|.. ..++.+|+.+|+++..
T Consensus 43 ~~~~~~~lg~~~~~----~~~~~~A~~~~~~al~ 72 (177)
T 2e2e_A 43 NSEQWALLGEYYLW----QNDYSNSLLAYRQALQ 72 (177)
T ss_dssp CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Confidence 44555555555542 3355555555555543
No 100
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=77.91 E-value=5.8 Score=29.89 Aligned_cols=31 Identities=3% Similarity=-0.077 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 54 INMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 54 ~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.+.++||.+|.. ..++.+|+.+|++|.+..
T Consensus 196 ~~~~~nla~~~~~----~g~~~~A~~~~~~al~~~ 226 (336)
T 1p5q_A 196 LASHLNLAMCHLK----LQAFSAAIESCNKALELD 226 (336)
T ss_dssp HHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 6899999999995 569999999999998764
No 101
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=77.24 E-value=7.3 Score=27.48 Aligned_cols=46 Identities=9% Similarity=-0.063 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.|..+|+ ++.+ -.++.+.+.+|.+|.. ..++.+|+.+|++|.+..
T Consensus 289 ~~A~~~~~---~~~~~~~~~~~~~~~~~~~~~~----~g~~~~A~~~~~~a~~~~ 336 (359)
T 3ieg_A 289 VEAIRICS---EVLQMEPDNVNALKDRAEAYLI----EEMYDEAIQDYEAAQEHN 336 (359)
T ss_dssp HHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHH---HHHHhCcccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcC
Confidence 56788888 5544 4588999999999985 668999999999998754
No 102
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=77.13 E-value=9.6 Score=24.99 Aligned_cols=44 Identities=11% Similarity=0.157 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCc-CCHHHHHHHHHHHHh
Q 033607 36 DCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVA-RDAQKGRIWISRASR 86 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~-kD~~kA~~Wl~kAA~ 86 (115)
+.|..+|+ ++.. ..+..+.+.+|.+|.. . .++.+|+.+|+++..
T Consensus 59 ~~A~~~~~---~a~~~~~~~~~~~~~l~~~~~~----~~~~~~~A~~~~~~~~~ 105 (225)
T 2vq2_A 59 DKAQESFR---QALSIKPDSAEINNNYGWFLCG----RLNRPAESMAYFDKALA 105 (225)
T ss_dssp HHHHHHHH---HHHHHCTTCHHHHHHHHHHHHT----TTCCHHHHHHHHHHHHT
T ss_pred HHHHHHHH---HHHHhCCCChHHHHHHHHHHHH----hcCcHHHHHHHHHHHHc
Confidence 34555555 4333 2355666666666653 3 466666666666665
No 103
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=77.08 E-value=2 Score=31.58 Aligned_cols=45 Identities=11% Similarity=0.038 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHH-HCCC----HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 37 CVKRWFRDTLKEA-KGGD----INMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 37 ~A~~wf~~~~kAA-~~Gd----~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
.|..+|+..++.. +.|+ +.+..+||.+|.. .++.+|+.+|++|.+
T Consensus 94 ~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-----g~~~~A~~~~~~Al~ 143 (307)
T 2ifu_A 94 EAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-----LDLSKAVHLYQQAAA 143 (307)
T ss_dssp GGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-----TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHH
Confidence 4666777333322 2344 4577889999974 489999999999876
No 104
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=76.57 E-value=6.7 Score=25.79 Aligned_cols=30 Identities=3% Similarity=-0.102 Sum_probs=14.6
Q ss_pred CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 53 DINMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 53 d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
++.+.+.||.+|.. ..++.+|+.+|+++.+
T Consensus 146 ~~~~~~~la~~~~~----~~~~~~A~~~~~~~~~ 175 (225)
T 2vq2_A 146 FPPAFKELARTKML----AGQLGDADYYFKKYQS 175 (225)
T ss_dssp CHHHHHHHHHHHHH----HTCHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Confidence 34555555555442 3345555555555544
No 105
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=76.44 E-value=4.8 Score=31.92 Aligned_cols=46 Identities=15% Similarity=0.144 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.|..+|+ ++.+ -.++.+.+.||.+|.. ..++.+|+.+|++|.+..
T Consensus 120 ~~A~~~~~---~al~~~p~~~~a~~~lg~~~~~----~g~~~~A~~~~~~al~~~ 167 (474)
T 4abn_A 120 PEAEVLLS---KAVKLEPELVEAWNQLGEVYWK----KGDVTSAHTCFSGALTHC 167 (474)
T ss_dssp HHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHH---HHHhhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhC
Confidence 56777888 5543 3578888888888884 568888888888888764
No 106
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=76.20 E-value=6.8 Score=25.98 Aligned_cols=44 Identities=5% Similarity=0.066 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 38 VKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 38 A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+..+|+ ++... +++.+.++||.+|.. ..++.+|+.+|+++.+..
T Consensus 93 a~~~~~---~al~~~P~~~~~~~~la~~~~~----~g~~~~A~~~~~~~l~~~ 138 (176)
T 2r5s_A 93 ELKRLE---QELAANPDNFELACELAVQYNQ----VGRDEEALELLWNILKVN 138 (176)
T ss_dssp HHHHHH---HHHHHSTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHTTC
T ss_pred HHHHHH---HHHHhCCCCHHHHHHHHHHHHH----cccHHHHHHHHHHHHHhC
Confidence 466777 55544 589999999999984 569999999999998765
No 107
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=76.18 E-value=5 Score=27.38 Aligned_cols=13 Identities=8% Similarity=0.059 Sum_probs=5.5
Q ss_pred CHHHHHHHHHHHH
Q 033607 73 DAQKGRIWISRAS 85 (115)
Q Consensus 73 D~~kA~~Wl~kAA 85 (115)
++.+|+.+|+++.
T Consensus 190 ~~~~A~~~~~~~~ 202 (252)
T 2ho1_A 190 EYVPARQYYDLFA 202 (252)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 4444444444443
No 108
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=75.93 E-value=2.7 Score=29.03 Aligned_cols=31 Identities=13% Similarity=0.160 Sum_probs=16.3
Q ss_pred CCHHHHHHHH-HHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 52 GDINMQVLVG-QMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 52 Gd~~Aq~~LG-~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
.++.+.+.|| .+|..+ ++.+|+..|+++.+.
T Consensus 140 ~~~~~~~~l~~~~~~~~-----~~~~A~~~~~~a~~~ 171 (272)
T 3u4t_A 140 TDPKVFYELGQAYYYNK-----EYVKADSSFVKVLEL 171 (272)
T ss_dssp CCHHHHHHHHHHHHHTT-----CHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHh
Confidence 3455555555 555443 555555555555543
No 109
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=75.87 E-value=8.2 Score=25.85 Aligned_cols=13 Identities=15% Similarity=0.245 Sum_probs=5.7
Q ss_pred CHHHHHHHHHHHH
Q 033607 73 DAQKGRIWISRAS 85 (115)
Q Consensus 73 D~~kA~~Wl~kAA 85 (115)
++.+|+.+|+++.
T Consensus 140 ~~~~A~~~~~~~~ 152 (243)
T 2q7f_A 140 QPKLALPYLQRAV 152 (243)
T ss_dssp CHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH
Confidence 4444444444443
No 110
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=75.82 E-value=4.9 Score=34.64 Aligned_cols=45 Identities=13% Similarity=0.077 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 36 DCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
+.|..+|+ ++.+. .++.+.++||.+|.. ..++.+|+..|++|.+.
T Consensus 26 ~eAi~~~~---kAl~l~P~~~~a~~nLg~~l~~----~g~~~eA~~~~~~Al~l 72 (723)
T 4gyw_A 26 EEAVRLYR---KALEVFPEFAAAHSNLASVLQQ----QGKLQEALMHYKEAIRI 72 (723)
T ss_dssp HHHHHHHH---HHHHHCSCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHh
Confidence 44666666 44433 466666666666663 34666666666666553
No 111
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=75.60 E-value=4.4 Score=27.93 Aligned_cols=47 Identities=15% Similarity=0.188 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHC-CC------HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 38 VKRWFRDTLKEAKG-GD------INMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 38 A~~wf~~~~kAA~~-Gd------~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
|..+|+..++.... .+ ..+.+.||.+|.. ..|+.+|+.+|+++.+..
T Consensus 198 A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~al~~~ 251 (272)
T 3u4t_A 198 AKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTI----NRDKVKADAAWKNILALD 251 (272)
T ss_dssp THHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcC
Confidence 55677733333311 22 3688899999985 679999999999998654
No 112
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=75.53 E-value=8.6 Score=26.17 Aligned_cols=47 Identities=4% Similarity=0.096 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAK----GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~----~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+ ++.. ..+..+.+.||.+|.. ..++.+|+.+|+++.+..
T Consensus 121 ~~~A~~~~~---~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~~~~~~ 171 (252)
T 2ho1_A 121 YEEAYQRLL---EASQDTLYPERSRVFENLGLVSLQ----MKKPAQAKEYFEKSLRLN 171 (252)
T ss_dssp HHHHHHHHH---HHTTCTTCTTHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH---HHHhCccCcccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcC
Confidence 456677777 5544 2356677777777663 446777777777776643
No 113
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=75.42 E-value=6.5 Score=28.38 Aligned_cols=48 Identities=8% Similarity=0.125 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHC--CC----HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 36 DCVKRWFRDTLKEAKG--GD----INMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~--Gd----~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
+.|..+|++.++-++. ++ ..+.+++|.+|.. ..++.+|+.+|++|.+.
T Consensus 172 ~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~----~~~y~~Al~~~~kal~~ 225 (293)
T 2qfc_A 172 KKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYL----DSRYEESLYQVNKAIEI 225 (293)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHH----HhhHHHHHHHHHHHHHH
Confidence 5688889844432232 22 2689999999984 67999999999999753
No 114
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=75.33 E-value=6.7 Score=28.64 Aligned_cols=45 Identities=11% Similarity=0.090 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 36 DCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
+.|..+|+ ++.+. .++.+.++||.+|.. ..++.+|+.+|++|.+.
T Consensus 55 ~~A~~~~~---~al~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~l 101 (281)
T 2c2l_A 55 EQALADCR---RALELDGQSVKAHFFLGQCQLE----MESYDEAIANLQRAYSL 101 (281)
T ss_dssp HHHHHHHH---HHTTSCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHh
Confidence 34566666 54443 466777777777763 34777777777777653
No 115
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=75.18 E-value=7.5 Score=27.24 Aligned_cols=31 Identities=6% Similarity=-0.101 Sum_probs=16.6
Q ss_pred CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 53 DINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 53 d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
++.+.+.||.+|.. ..++.+|+.+|+++.+.
T Consensus 235 ~~~~~~~la~~~~~----~g~~~~A~~~~~~a~~~ 265 (330)
T 3hym_B 235 WEPLLNNLGHVCRK----LKKYAEALDYHRQALVL 265 (330)
T ss_dssp CCHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH----hcCHHHHHHHHHHHHhh
Confidence 34555555555552 33555566666555543
No 116
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=75.05 E-value=7.4 Score=26.95 Aligned_cols=47 Identities=13% Similarity=-0.010 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHHC--CC---HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAKG--GD---INMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~--Gd---~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|...|+ ++... .+ ..++++||.+|.. ..++.+|+..|+++.+..
T Consensus 20 ~~~A~~~~~---~~~~~~p~~~~~~~a~~~lg~~~~~----~~~~~~A~~~~~~~l~~~ 71 (225)
T 2yhc_A 20 WRQAITQLE---ALDNRYPFGPYSQQVQLDLIYAYYK----NADLPLAQAAIDRFIRLN 71 (225)
T ss_dssp HHHHHHHHH---HHHHHCTTSTTHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHH---HHHHhCCCChHHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHC
Confidence 466888999 55542 12 4799999999985 669999999999998753
No 117
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=75.03 E-value=9.8 Score=30.06 Aligned_cols=31 Identities=13% Similarity=0.111 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 54 INMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 54 ~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
..+.++||.+|.. ..++.+|+.+|++|.+..
T Consensus 317 ~~~~~nla~~~~~----~g~~~~A~~~~~~al~~~ 347 (457)
T 1kt0_A 317 LAAFLNLAMCYLK----LREYTKAVECCDKALGLD 347 (457)
T ss_dssp HHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHH----hcCHHHHHHHHHHHHhcC
Confidence 6899999999995 669999999999998754
No 118
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=74.79 E-value=8.9 Score=25.65 Aligned_cols=45 Identities=11% Similarity=0.146 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 37 CVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 37 ~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.|..+|+ ++.. ..+..+.+.+|.+|.. ..++.+|+.+|+++.+..
T Consensus 75 ~A~~~~~---~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~~~~~~ 121 (243)
T 2q7f_A 75 RALAFYD---KALELDSSAATAYYGAGNVYVV----KEMYKEAKDMFEKALRAG 121 (243)
T ss_dssp HHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHH---HHHHcCCcchHHHHHHHHHHHH----hccHHHHHHHHHHHHHhC
Confidence 3555555 3333 2356666666666663 446666777776666543
No 119
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=74.34 E-value=4.7 Score=23.81 Aligned_cols=32 Identities=9% Similarity=0.022 Sum_probs=26.6
Q ss_pred CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 53 DINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 53 d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
++.+.+.+|.+|.. ..++.+|+.+|++|.+..
T Consensus 3 ~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~ 34 (111)
T 2l6j_A 3 QFEKQKEQGNSLFK----QGLYREAVHCYDQLITAQ 34 (111)
T ss_dssp HHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcC
Confidence 45678899999884 679999999999998754
No 120
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=74.04 E-value=7 Score=28.43 Aligned_cols=46 Identities=15% Similarity=0.186 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHCC----CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 35 SDCVKRWFRDTLKEAKGG----DINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~G----d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
.+.|..+|+ ++.... ++.+.+.||.+|.. ..++.+|+.+|+++.+.
T Consensus 193 ~~~A~~~~~---~al~~~p~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~ 242 (365)
T 4eqf_A 193 LEGVKELYL---EAAHQNGDMIDPDLQTGLGVLFHL----SGEFNRAIDAFNAALTV 242 (365)
T ss_dssp HHHHHHHHH---HHHHHSCSSCCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH---HHHHhCcCccCHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHh
Confidence 344555555 333321 45556666665553 34555666666655543
No 121
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=73.86 E-value=9.2 Score=26.72 Aligned_cols=31 Identities=13% Similarity=0.065 Sum_probs=17.2
Q ss_pred CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 52 GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 52 Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
.+..+.+.||.+|.. ..++.+|+.+|+++..
T Consensus 238 ~~~~~~~~l~~~~~~----~g~~~~A~~~~~~a~~ 268 (327)
T 3cv0_A 238 GYVRVMYNMAVSYSN----MSQYDLAAKQLVRAIY 268 (327)
T ss_dssp TCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH----hccHHHHHHHHHHHHH
Confidence 345556666665553 3456666666665544
No 122
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=73.76 E-value=0.8 Score=34.80 Aligned_cols=36 Identities=11% Similarity=-0.010 Sum_probs=16.0
Q ss_pred CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcCCch
Q 033607 52 GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTRSSV 91 (115)
Q Consensus 52 Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G~~~ 91 (115)
.++.+.++||.+|.. ..++.+|+.+|++|.+.+...
T Consensus 428 ~~~~~~~~LG~~~~~----~g~~~~A~~~y~kALe~~~~~ 463 (472)
T 4g1t_A 428 ADSEALHVLAFLQEL----NEKMQQADEDSERGLESGSLI 463 (472)
T ss_dssp -CTTHHHHHHHHHHH----HHHCC----------------
T ss_pred CCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcCCCC
Confidence 577899999999984 568889999999999877543
No 123
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=73.65 E-value=4.1 Score=28.61 Aligned_cols=50 Identities=6% Similarity=-0.176 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHC-----CCHHHHHHHHHHHHcC-CC---CcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAKG-----GDINMQVLVGQMYFSG-YG---VARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~-----Gd~~Aq~~LG~mY~~G-~G---v~kD~~kA~~Wl~kAA~~G 88 (115)
+.|..+|+ ++... ..+.+.+.||.+|..- .. -..++.+|+.+|+++.+..
T Consensus 69 ~~A~~~~~---~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~ 127 (261)
T 3qky_A 69 LLAASEYE---RFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRY 127 (261)
T ss_dssp HHHHHHHH---HHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH---HHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHC
Confidence 56888999 66654 3478999999999741 00 1468999999999998753
No 124
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=73.42 E-value=6.5 Score=33.86 Aligned_cols=30 Identities=17% Similarity=0.068 Sum_probs=14.2
Q ss_pred CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 53 DINMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 53 d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
++.+.++||.+|.. ..++++|+..|++|.+
T Consensus 76 ~~~a~~nLg~~l~~----~g~~~~A~~~~~kAl~ 105 (723)
T 4gyw_A 76 FADAYSNMGNTLKE----MQDVQGALQCYTRAIQ 105 (723)
T ss_dssp CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Confidence 44455555554442 3344455555555443
No 125
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=73.36 E-value=10 Score=27.65 Aligned_cols=48 Identities=0% Similarity=0.003 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHC-CC----HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 35 SDCVKRWFRDTLKEAKG-GD----INMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~-Gd----~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
.+.|..+|+..+..... |+ ..+.++||.+|.. ..++.+|+.+|++|.+
T Consensus 131 ~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~ 183 (307)
T 2ifu_A 131 LSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVR----QQKFDEAAASLQKEKS 183 (307)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Confidence 45677888844333222 33 5678899999884 5689999999999876
No 126
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=72.64 E-value=11 Score=27.16 Aligned_cols=30 Identities=10% Similarity=-0.016 Sum_probs=14.0
Q ss_pred CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 53 DINMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 53 d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
++.+.+.||.+|.. ..++.+|+.+|+++..
T Consensus 284 ~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~ 313 (368)
T 1fch_A 284 YIRSRYNLGISCIN----LGAHREAVEHFLEALN 313 (368)
T ss_dssp CHHHHHHHHHHHHH----HTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH----CCCHHHHHHHHHHHHH
Confidence 44444555554442 3344555555554443
No 127
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=72.29 E-value=13 Score=26.70 Aligned_cols=46 Identities=7% Similarity=0.002 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.|..+|+ ++.+. .++.+.+.||.+|.. ..++.+|+.+|+++.+..
T Consensus 81 ~~A~~~~~---~al~~~p~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~ 128 (368)
T 1fch_A 81 PNAVLLFE---AAVQQDPKHMEAWQYLGTTQAE----NEQELLAISALRRCLELK 128 (368)
T ss_dssp HHHHHHHH---HHHHSCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH---HHHHhCCCCHHHHHHHHHHHHH----CcCHHHHHHHHHHHHhcC
Confidence 45777787 65554 477888888888774 457888888888887654
No 128
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=72.28 E-value=12 Score=27.07 Aligned_cols=46 Identities=11% Similarity=0.112 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.|..+|+ ++.. -.++.+.+.||.+|.. ..++.+|+.+|++|.+..
T Consensus 82 ~~A~~~~~---~al~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~ 129 (365)
T 4eqf_A 82 PVTILFME---AAILQDPGDAEAWQFLGITQAE----NENEQAAIVALQRCLELQ 129 (365)
T ss_dssp HHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH---HHHHhCcCCHHHHHHHHHHHHH----CCCHHHHHHHHHHHHhcC
Confidence 55778888 5544 3578888888988884 457888888888887653
No 129
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=71.96 E-value=9.2 Score=30.61 Aligned_cols=45 Identities=2% Similarity=-0.240 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 36 DCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
+.|..+|+ ++.+. .++.+.++||.+|.. ..++++|+.+|++|.+.
T Consensus 57 ~~A~~~~~---~al~l~p~~~~~~~~lg~~~~~----~g~~~eA~~~~~~al~~ 103 (477)
T 1wao_1 57 GYALGDAT---RAIELDKKYIKGYYRRAASNMA----LGKFRAALRDYETVVKV 103 (477)
T ss_dssp HHHHHHHH---HHHHSCTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHh
Confidence 34555555 44443 356666666666663 44666777777766654
No 130
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=71.20 E-value=10 Score=29.69 Aligned_cols=48 Identities=10% Similarity=0.087 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+ ++... .+..+.+++|.+|.. ..+|+.+|+.+|++|.+..
T Consensus 113 ~~~Al~~~~---~al~l~P~~~~a~~~~g~~l~~---~g~d~~eAl~~~~~al~l~ 162 (382)
T 2h6f_A 113 SERAFKLTR---DAIELNAANYTVWHFRRVLLKS---LQKDLHEEMNYITAIIEEQ 162 (382)
T ss_dssp CHHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH---TTCCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHH---HHHHhCccCHHHHHHHHHHHHH---cccCHHHHHHHHHHHHHHC
Confidence 356778888 55544 689999999999985 3346999999999998755
No 131
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=70.63 E-value=12 Score=27.08 Aligned_cols=48 Identities=10% Similarity=0.065 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHH-CCC----HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 36 DCVKRWFRDTLKEAK-GGD----INMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~-~Gd----~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
+.|..+|+..++.+. .++ ..+.+.||.+|.. ..++.+|+.+|++|.+.
T Consensus 284 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~ 336 (406)
T 3sf4_A 284 EKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTA----LGNHDQAMHFAEKHLEI 336 (406)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHH
Confidence 457777774443332 233 6788889998884 56899999999988754
No 132
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=70.38 E-value=14 Score=26.80 Aligned_cols=50 Identities=2% Similarity=-0.176 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHH-CCC----HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAK-GGD----INMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~-~Gd----~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+..++-.. .++ ..+..+||.+|.. ..++.+|+.+|+++.+..
T Consensus 134 ~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~ 188 (292)
T 1qqe_A 134 YAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKAL----DGQYIEASDIYSKLIKSS 188 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHH
Confidence 4568888884443332 233 4678899999985 568999999999998743
No 133
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=70.26 E-value=6.8 Score=29.14 Aligned_cols=44 Identities=9% Similarity=0.161 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHC----C----CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 36 DCVKRWFRDTLKEAKG----G----DINMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~----G----d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
+.|..+|+ ++... + .+.+.+.||.+|.. ..++.+|+.+|++|.+
T Consensus 120 ~~A~~~~~---~al~~~~~~~~~~~~a~~~~~lg~~~~~----~~~~~~A~~~~~~al~ 171 (383)
T 3ulq_A 120 LSAIKFFK---KAESKLIFVKDRIEKAEFFFKMSESYYY----MKQTYFSMDYARQAYE 171 (383)
T ss_dssp HHHHHHHH---HHHTTGGGCCCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHHHHHhhCCCHHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Confidence 56778888 65543 3 45789999999996 5699999999999976
No 134
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=70.24 E-value=8.4 Score=28.72 Aligned_cols=49 Identities=12% Similarity=0.020 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHH--C--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 35 SDCVKRWFRDTLKEAK--G--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~--~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
.+.|..+|+..+.-+. . ..+.+.++||.+|.. ..++.+|+.+|++|.+.
T Consensus 238 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~ 290 (378)
T 3q15_A 238 DQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCK----AGQTQKAFQFIEEGLDH 290 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHH
Confidence 3567888883333211 1 236789999999984 56899999999999874
No 135
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=70.09 E-value=16 Score=25.17 Aligned_cols=48 Identities=17% Similarity=0.185 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHH-CCC----HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 36 DCVKRWFRDTLKEAK-GGD----INMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~-~Gd----~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
+.|..+|+..++... .++ ..+.+.||.+|.. ..++.+|+.+|++|...
T Consensus 240 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~a~~~ 292 (338)
T 3ro2_A 240 ETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTL----LQDYEKAIDYHLKHLAI 292 (338)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHH
Confidence 456777774443332 233 6678888988874 56899999999988653
No 136
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=70.01 E-value=10 Score=26.23 Aligned_cols=49 Identities=10% Similarity=0.052 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHH-CCC----HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAK-GGD----INMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~-~Gd----~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.|..+|+..++... .++ ..+.+.||.+|.. ..++.+|+.+|++|.+.-
T Consensus 280 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~a~~~~ 333 (338)
T 3ro2_A 280 EKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTA----LGNHDQAMHFAEKHLEIS 333 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH----cCChHHHHHHHHHHHHHH
Confidence 557788884443332 244 5688899999984 569999999999998653
No 137
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=69.85 E-value=11 Score=27.98 Aligned_cols=46 Identities=9% Similarity=-0.066 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.|..+|+ ++.. -.++.+.+.||.+|.. ..++.+|+.+|+++.+..
T Consensus 312 ~~A~~~~~---~a~~~~p~~~~~~~~l~~~~~~----~~~~~~A~~~~~~al~~~ 359 (450)
T 2y4t_A 312 VEAIRVCS---EVLQMEPDNVNALKDRAEAYLI----EEMYDEAIQDYETAQEHN 359 (450)
T ss_dssp HHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHTTS
T ss_pred HHHHHHHH---HHHHhCcccHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHhC
Confidence 55778888 6543 4578999999999984 569999999999997753
No 138
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=69.49 E-value=6.2 Score=28.69 Aligned_cols=44 Identities=18% Similarity=0.070 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHC----CC----HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 36 DCVKRWFRDTLKEAKG----GD----INMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~----Gd----~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
+.|..+|+ ++... |+ +.+..+||.+|.. ..++.+|+.+|++|.+
T Consensus 54 ~~A~~~~~---~al~~~~~~~~~~~~a~~~~~lg~~~~~----~g~~~~A~~~~~~Al~ 105 (292)
T 1qqe_A 54 NLAGDSFL---KAADYQKKAGNEDEAGNTYVEAYKCFKS----GGNSVNAVDSLENAIQ 105 (292)
T ss_dssp HHHHHHHH---HHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHHHHHHHhCCHHHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHH
Confidence 44666777 44432 44 5688899999984 4589999999999976
No 139
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=69.22 E-value=11 Score=27.35 Aligned_cols=47 Identities=6% Similarity=-0.084 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+ ++.. -.++.+.+++|.+|.. ..++.+|+.+|++|.+..
T Consensus 20 ~~~A~~~~~---~al~~~p~~~~~~~~la~~~~~----~~~~~~A~~~~~~al~~~ 68 (281)
T 2c2l_A 20 YPEAAACYG---RAITRNPLVAVYYTNRALCYLK----MQQPEQALADCRRALELD 68 (281)
T ss_dssp HHHHHHHHH---HHHHHCSCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHH---HHHHhCCccHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHhC
Confidence 456888898 6654 3589999999999985 569999999999998764
No 140
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=69.03 E-value=9.5 Score=26.43 Aligned_cols=48 Identities=10% Similarity=0.005 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHH-------CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 36 DCVKRWFRDTLKEAK-------GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~-------~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
+.|..+|+..++.+. .....+.+.||.+|.. ..++.+|+.+|+++.+.
T Consensus 86 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~a~~~ 140 (311)
T 3nf1_A 86 KDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGK----RGKYKEAEPLCKRALEI 140 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHH----cCcHHHHHHHHHHHHHH
Confidence 557778884433321 2246788999999984 56999999999999875
No 141
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=68.79 E-value=14 Score=28.10 Aligned_cols=50 Identities=4% Similarity=0.010 Sum_probs=39.8
Q ss_pred hhHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcCC
Q 033607 33 VVSDCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTRS 89 (115)
Q Consensus 33 ~~~~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G~ 89 (115)
...+.|..+|+ ++.. -.++.+.+.||.+|.. ..++.+|+.+|+++.+...
T Consensus 442 ~~~~~A~~~~~---~a~~~~p~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~~ 493 (537)
T 3fp2_A 442 EKFNAAIKLLT---KACELDPRSEQAKIGLAQLKLQ----MEKIDEAIELFEDSAILAR 493 (537)
T ss_dssp HHHHHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC-
T ss_pred hHHHHHHHHHH---HHHHhCCCCHHHHHHHHHHHHH----hccHHHHHHHHHHHHHhCC
Confidence 44567888999 5554 4678999999999985 5699999999999988653
No 142
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=68.61 E-value=10 Score=27.00 Aligned_cols=45 Identities=4% Similarity=-0.184 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHC---------CCHHHH----HHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 36 DCVKRWFRDTLKEAKG---------GDINMQ----VLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~---------Gd~~Aq----~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
+.|..+|. ++.+. .++.+. |++|..|.. -.++.+|+..|++|.+.
T Consensus 74 ~eAl~~~~---kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~----lgr~eEAl~~y~kAlel 131 (159)
T 2hr2_A 74 DEALHSAD---KALHYFNRRGELNQDEGKLWISAVYSRALALDG----LGRGAEAMPEFKKVVEM 131 (159)
T ss_dssp HHHHHHHH---HHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHHHhhhccccCCCchHHHHHHHHHhHHHHHHH----CCCHHHHHHHHHHHHhc
Confidence 45777888 66654 677888 999999873 45899999999999764
No 143
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=68.57 E-value=12 Score=26.99 Aligned_cols=48 Identities=6% Similarity=-0.159 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHCC-C----HHHHHHHHHHHHcCCCCcCCHHHH-HHHHHHHHh
Q 033607 35 SDCVKRWFRDTLKEAKGG-D----INMQVLVGQMYFSGYGVARDAQKG-RIWISRASR 86 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~G-d----~~Aq~~LG~mY~~G~Gv~kD~~kA-~~Wl~kAA~ 86 (115)
.+.|..+|++.++-+... + ..+.+++|.+|.. ..++.+| ..+|++|..
T Consensus 212 y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~----~g~~~~Ai~~~~~~Al~ 265 (293)
T 2qfc_A 212 YEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRK----LEYEEAEIEDAYKKASF 265 (293)
T ss_dssp HHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHH----TTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH----cCCcHHHHHHHHHHHHH
Confidence 356888888555444322 1 6789999999984 4578889 888988864
No 144
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=68.36 E-value=12 Score=29.72 Aligned_cols=30 Identities=10% Similarity=0.241 Sum_probs=15.1
Q ss_pred CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 53 DINMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 53 d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
+..+.++||.+|.. ..++.+|+.+|++|.+
T Consensus 56 ~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~ 85 (568)
T 2vsy_A 56 HPEAVARLGRVRWT----QQRHAEAAVLLQQASD 85 (568)
T ss_dssp CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH----CCCHHHHHHHHHHHHh
Confidence 44555555555542 2345555555555544
No 145
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=68.30 E-value=11 Score=29.92 Aligned_cols=30 Identities=17% Similarity=0.200 Sum_probs=15.3
Q ss_pred CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 53 DINMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 53 d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
++.+.++||.+|.. ..++.+|+.+|++|.+
T Consensus 90 ~~~~~~~la~~~~~----~g~~~~A~~~~~~al~ 119 (568)
T 2vsy_A 90 HPGIALWLGHALED----AGQAEAAAAAYTRAHQ 119 (568)
T ss_dssp CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Confidence 45555555555542 3345555555555544
No 146
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=67.72 E-value=9.2 Score=28.14 Aligned_cols=48 Identities=13% Similarity=0.105 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHH-----HCCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 36 DCVKRWFRDTLKEA-----KGGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 36 ~~A~~wf~~~~kAA-----~~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
+.|..+|+..++.+ ......+.+.||.+|.. ..++.+|+.+|++|.+.
T Consensus 103 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~ 155 (411)
T 4a1s_A 103 NKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKV----MGRFDEAAICCERHLTL 155 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHH
Confidence 44666777443333 22345677888888874 45888888888887654
No 147
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=67.54 E-value=7.7 Score=25.35 Aligned_cols=47 Identities=15% Similarity=0.046 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHH-CC-C----HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 36 DCVKRWFRDTLKEAK-GG-D----INMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~-~G-d----~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
+.|..+|++.++.+. .+ + ..+.++||.+|.. ..++.+|+.+|++|.+
T Consensus 83 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~ 135 (203)
T 3gw4_A 83 DAARRCFLEERELLASLPEDPLAASANAYEVATVALH----FGDLAGARQEYEKSLV 135 (203)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHH
Confidence 457778884443322 33 3 4578899999885 5589999999999874
No 148
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=67.21 E-value=14 Score=27.42 Aligned_cols=47 Identities=15% Similarity=0.074 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHH-CCC----HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 36 DCVKRWFRDTLKEAK-GGD----INMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~-~Gd----~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
+.|..+|+..++-+. .++ ..+.++||.+|.. ..++.+|+.+|++|.+
T Consensus 199 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~----~~~~~~A~~~~~~al~ 250 (378)
T 3q15_A 199 DKALPHLEAALELAMDIQNDRFIAISLLNIANSYDR----SGDDQMAVEHFQKAAK 250 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHH
Confidence 567888884444332 233 4678899999984 5699999999999987
No 149
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=67.07 E-value=9.4 Score=24.91 Aligned_cols=48 Identities=15% Similarity=0.079 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHC-----CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 36 DCVKRWFRDTLKEAKG-----GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~-----Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
+.|..+|+..+..+.. ....+.++||.+|.. ..++.+|+.+|++|...
T Consensus 43 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~ 95 (203)
T 3gw4_A 43 DEARASFQALQQQAQKSGDHTAEHRALHQVGMVERM----AGNWDAARRCFLEEREL 95 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHH
Confidence 4577888844443332 235678899999884 56899999999998764
No 150
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=66.32 E-value=11 Score=29.18 Aligned_cols=46 Identities=7% Similarity=-0.005 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAKGG-----DINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~G-----d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.|..||+ ++.... .+.+++++|.++.. .-+..+|+.+|+++....
T Consensus 188 ~eAl~~l~---~a~~g~~~P~~~~da~~~~glaL~~----lGr~deA~~~l~~a~a~~ 238 (282)
T 4f3v_A 188 TEAERRLT---EANDSPAGEACARAIAWYLAMARRS----QGNESAAVALLEWLQTTH 238 (282)
T ss_dssp HHHHHHHH---HHHTSTTTTTTHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHH---HHhcCCCCccccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcC
Confidence 55888998 776444 34688999998874 448889999999887654
No 151
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=66.09 E-value=19 Score=28.72 Aligned_cols=52 Identities=6% Similarity=-0.089 Sum_probs=42.1
Q ss_pred cchhhHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 30 LSEVVSDCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 30 l~~~~~~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.....+.|..+|+ ++.+. .++.+.++||.+|.. ..++.+|+.+|++|.+..
T Consensus 17 ~~~g~~~~A~~~~~---~Al~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~l~ 70 (477)
T 1wao_1 17 FKAKDYENAIKFYS---QAIELNPSNAIYYGNRSLAYLR----TECYGYALGDATRAIELD 70 (477)
T ss_dssp TTTTCHHHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHSC
T ss_pred HHhCCHHHHHHHHH---HHHHhCCccHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHhC
Confidence 44455678999999 66554 578999999999985 669999999999998864
No 152
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=66.07 E-value=12 Score=25.89 Aligned_cols=48 Identities=6% Similarity=-0.022 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHH-------CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 36 DCVKRWFRDTLKEAK-------GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~-------~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
+.|..+|+..++... .....+.+.||.+|.. ..++.+|+.+|+++...
T Consensus 128 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~----~~~~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 128 KEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQN----QGKYEEVEYYYQRALEI 182 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHH
Confidence 557788884433321 2245778899999984 56899999999999875
No 153
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=65.55 E-value=14 Score=28.63 Aligned_cols=46 Identities=9% Similarity=0.078 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.|..+|+ ++.+. .++.+.+.||.+|.. ..++.+|+.+|+++.+..
T Consensus 533 ~~A~~~~~---~~~~~~p~~~~~~~~l~~~~~~----~g~~~~A~~~~~~~l~~~ 580 (597)
T 2xpi_A 533 DAAIDALN---QGLLLSTNDANVHTAIALVYLH----KKIPGLAITHLHESLAIS 580 (597)
T ss_dssp HHHHHHHH---HHHHHSSCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH---HHHHhCCCChHHHHHHHHHHHH----hCCHHHHHHHHHHHHhcC
Confidence 56888888 65543 488999999999985 568999999999998754
No 154
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=65.39 E-value=16 Score=27.17 Aligned_cols=46 Identities=2% Similarity=-0.005 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.|..+|+ ++.. -.++.+.+.+|.+|.. ..++.+|+.+|+++.+..
T Consensus 43 ~~A~~~~~---~~l~~~p~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~ 90 (450)
T 2y4t_A 43 ADALSQFH---AAVDGDPDNYIAYYRRATVFLA----MGKSKAALPDLTKVIQLK 90 (450)
T ss_dssp HHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH---HHHHhCCccHHHHHHHHHHHHH----CCCHHHHHHHHHHHHhcC
Confidence 34677777 5443 3578888888888874 457888888888887754
No 155
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=65.38 E-value=20 Score=24.93 Aligned_cols=44 Identities=18% Similarity=0.245 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 36 DCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
+.|..+|+ ++... .++.+.+.+|.+|.. ..++.+|+.+|+++..
T Consensus 176 ~~A~~~~~---~al~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~ 221 (330)
T 3hym_B 176 KLAERFFS---QALSIAPEDPFVMHEVGVVAFQ----NGEWKTAEKWFLDALE 221 (330)
T ss_dssp HHHHHHHH---HHHTTCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHHHhCCCChHHHHHHHHHHHH----cccHHHHHHHHHHHHH
Confidence 44566666 44443 356677777777663 4567777777777765
No 156
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=65.36 E-value=21 Score=25.56 Aligned_cols=45 Identities=13% Similarity=0.147 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHH----CCC----HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 35 SDCVKRWFRDTLKEAK----GGD----INMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~----~Gd----~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
.+.|..+|+ ++-. ..+ ..+..+||.+|.. ..++.+|+.+|++|.+
T Consensus 131 ~~~Ai~~~~---~al~~~~~~~~~~~~~~~~~~lg~~y~~----~g~~~~A~~~~~~al~ 183 (293)
T 3u3w_A 131 YEYCILELK---KLLNQQLTGIDVYQNLYIENAIANIYAE----NGYLKKGIDLFEQILK 183 (293)
T ss_dssp HHHHHHHHH---HHHHTCCCCSCTTHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHH---HHHHHhcccccHHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Confidence 356788888 6654 233 4478999999985 5689999999999984
No 157
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=64.20 E-value=14 Score=27.81 Aligned_cols=29 Identities=0% Similarity=-0.088 Sum_probs=24.9
Q ss_pred HHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 56 MQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 56 Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.++||.+|.. ..++.+|+.+|++|.+..
T Consensus 232 ~~~nla~~~~~----~g~~~~A~~~~~~al~~~ 260 (338)
T 2if4_A 232 CHLNIAACLIK----LKRYDEAIGHCNIVLTEE 260 (338)
T ss_dssp HHHHHHHHHHT----TTCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 78999999984 568999999999998754
No 158
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=63.89 E-value=12 Score=31.16 Aligned_cols=46 Identities=11% Similarity=-0.036 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.|..+|+ ++.+ -.++.+.+++|.+|.. ..++++|+..|++|.+..
T Consensus 450 ~~A~~~~~---~al~~~p~~~~a~~~lg~~~~~----~g~~~~A~~~~~~al~l~ 497 (681)
T 2pzi_A 450 AKATRKLD---DLAERVGWRWRLVWYRAVAELL----TGDYDSATKHFTEVLDTF 497 (681)
T ss_dssp HHHHHHHH---HHHHHHCCCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHH---HHhccCcchHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 45777888 5543 4789999999999984 569999999999998754
No 159
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=63.21 E-value=22 Score=26.00 Aligned_cols=49 Identities=4% Similarity=-0.112 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAKGGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+..++. .-.++.+.+.+|.+|.. ..++.+|...|++|.+..
T Consensus 182 ~~eA~~~~~~~l~~-~p~~~~~~~~la~~~~~----~g~~~eA~~~l~~al~~~ 230 (291)
T 3mkr_A 182 LQDAYYIFQEMADK-CSPTLLLLNGQAACHMA----QGRWEAAEGVLQEALDKD 230 (291)
T ss_dssp HHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-CCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Confidence 35577777732222 23577788888888774 557888888888887643
No 160
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=62.79 E-value=22 Score=24.67 Aligned_cols=31 Identities=10% Similarity=-0.083 Sum_probs=15.7
Q ss_pred CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 53 DINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 53 d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
++.+.+.+|.+|.. ..++.+|+.+|+++.+.
T Consensus 54 ~~~~~~~l~~~~~~----~~~~~~A~~~~~~a~~~ 84 (327)
T 3cv0_A 54 REEAWRSLGLTQAE----NEKDGLAIIALNHARML 84 (327)
T ss_dssp CHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhc
Confidence 45555555555543 33455555555555443
No 161
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=62.74 E-value=19 Score=27.05 Aligned_cols=50 Identities=10% Similarity=0.060 Sum_probs=39.7
Q ss_pred hHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcCCc
Q 033607 34 VSDCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTRSS 90 (115)
Q Consensus 34 ~~~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G~~ 90 (115)
..+.|..+|+ ++.. ..++.+.+.||.+|.. ..++.+|+.+|+++.+....
T Consensus 430 ~~~~A~~~~~---~a~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~a~~~~~~ 481 (514)
T 2gw1_A 430 NFIEATNLLE---KASKLDPRSEQAKIGLAQMKLQ----QEDIDEAITLFEESADLART 481 (514)
T ss_dssp HHHHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHCSS
T ss_pred CHHHHHHHHH---HHHHhCcccHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHhccc
Confidence 3456888888 5444 4588999999999984 56999999999999886643
No 162
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=62.73 E-value=10 Score=29.29 Aligned_cols=33 Identities=12% Similarity=-0.045 Sum_probs=28.3
Q ss_pred CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 52 GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 52 Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.++.+.++||.+|.. ..++.+|+.+|++|.+..
T Consensus 271 ~~~~~~~nla~~~~~----~g~~~~A~~~~~~al~~~ 303 (370)
T 1ihg_A 271 VALSCVLNIGACKLK----MSDWQGAVDSCLEALEID 303 (370)
T ss_dssp HHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHh----ccCHHHHHHHHHHHHHhC
Confidence 467889999999984 568999999999999864
No 163
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=61.70 E-value=21 Score=25.07 Aligned_cols=47 Identities=4% Similarity=-0.022 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcCC
Q 033607 36 DCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTRS 89 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G~ 89 (115)
+.|..+|+ ++.. -.+..+.+.+|.+|.. ..++.+|+.+|+++.+...
T Consensus 54 ~~A~~~~~---~~~~~~~~~~~~~~~l~~~~~~----~~~~~~A~~~~~~~~~~~~ 102 (359)
T 3ieg_A 54 KAALPDLT---KVIALKMDFTAARLQRGHLLLK----QGKLDEAEDDFKKVLKSNP 102 (359)
T ss_dssp HHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHH---HHHHhCCCcchHHHHHHHHHHH----cCChHHHHHHHHHHHhcCC
Confidence 44666666 4333 3466777777777763 4567777777777766543
No 164
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=61.68 E-value=12 Score=29.62 Aligned_cols=56 Identities=7% Similarity=-0.095 Sum_probs=38.9
Q ss_pred CcchhhHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 29 PLSEVVSDCVKRWFRDTLKEAKGGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 29 pl~~~~~~~A~~wf~~~~kAA~~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
|+.....++|...|+..++-.-.+++.+.+.+|..|..- .+|.+.+...|++|...
T Consensus 214 p~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~---~gd~~~a~~~L~kAL~a 269 (301)
T 3u64_A 214 ESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIP---LNNRAGFDEALDRALAI 269 (301)
T ss_dssp TTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTT---TTCHHHHHHHHHHHHHC
T ss_pred CccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHh---cCCHHHHHHHHHHHHcC
Confidence 344566778888888433333345688888888887731 26888888888888763
No 165
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=61.26 E-value=12 Score=27.54 Aligned_cols=47 Identities=15% Similarity=0.170 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHC-CC----HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 36 DCVKRWFRDTLKEAKG-GD----INMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~-Gd----~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
+.|..+|+..++.+.. ++ ..+.+.||.+|.. ..++.+|+.+|++|.+
T Consensus 280 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~ 331 (411)
T 4a1s_A 280 EDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTL----LHEFNTAIEYHNRHLA 331 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Confidence 4566777744433322 22 5677788888773 4578888888887765
No 166
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=60.26 E-value=25 Score=25.68 Aligned_cols=30 Identities=7% Similarity=-0.106 Sum_probs=14.3
Q ss_pred CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 53 DINMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 53 d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
++.+.+.||.+|.. ..++.+|+.+|+++.+
T Consensus 270 ~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~ 299 (388)
T 1w3b_A 270 FPDAYCNLANALKE----KGSVAEAEDCYNTALR 299 (388)
T ss_dssp CHHHHHHHHHHHHH----HSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH----cCCHHHHHHHHHHHHh
Confidence 34455555555442 2345555555555443
No 167
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=60.11 E-value=30 Score=25.32 Aligned_cols=46 Identities=9% Similarity=-0.019 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.|..+|+ ++.. -.++.+.+.||.+|.. ..++.+|+.+|++|....
T Consensus 152 ~~A~~~~~---~al~~~p~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~ 199 (388)
T 1w3b_A 152 EEAKACYL---KAIETQPNFAVAWSNLGCVFNA----QGEIWLAIHHFEKAVTLD 199 (388)
T ss_dssp HHHHHHHH---HHHHHCTTCHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH---HHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcC
Confidence 45666676 4433 3456777777777763 446777777777776543
No 168
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=59.43 E-value=25 Score=25.26 Aligned_cols=46 Identities=15% Similarity=0.177 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHHC--CC----HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 35 SDCVKRWFRDTLKEAKG--GD----INMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~--Gd----~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
.+.|..+|+ ++... .+ ..+.+.||.+|.. ..++.+|+.+|++|...
T Consensus 25 ~~~A~~~~~---~al~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~ 76 (406)
T 3sf4_A 25 CRAGVSFFE---AAVQVGTEDLKTLSAIYSQLGNAYFY----LHDYAKALEYHHHDLTL 76 (406)
T ss_dssp HHHHHHHHH---HHHHHCCSCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH---HHHhcCcccHHHHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHH
Confidence 456888999 55443 34 4678899999884 56999999999998653
No 169
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=58.22 E-value=11 Score=27.56 Aligned_cols=44 Identities=2% Similarity=0.024 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 36 DCVKRWFRDTLKEA--KGGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 36 ~~A~~wf~~~~kAA--~~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
+.|...|+ ++. .-+++.+.+.||.+|.. ..++.+|+.+|+++..
T Consensus 134 ~~A~~~~~---~al~~~P~~~~a~~~la~~~~~----~g~~~~A~~~l~~~~~ 179 (287)
T 3qou_A 134 TDALPLLX---DAWQLSNQNGEIGLLLAETLIA----LNRSEDAEAVLXTIPL 179 (287)
T ss_dssp HHHHHHHH---HHHHHTTSCHHHHHHHHHHHHH----TTCHHHHHHHHTTSCG
T ss_pred HHHHHHHH---HHHHhCCcchhHHHHHHHHHHH----CCCHHHHHHHHHhCch
Confidence 34556666 433 33577888888888774 4577777777777644
No 170
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=58.18 E-value=34 Score=24.22 Aligned_cols=56 Identities=14% Similarity=0.019 Sum_probs=41.1
Q ss_pred cchhhHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcCC
Q 033607 30 LSEVVSDCVKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTRS 89 (115)
Q Consensus 30 l~~~~~~~A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G~ 89 (115)
+....-..+.+-|. +... .-+.+++|++|.++.. -..+.|+.+++..|+...+..+
T Consensus 9 l~~~~l~~~~~~y~---~e~~~~~~~~~~~F~ya~~Lv~-S~~~~~~~~gI~lLe~ll~~~~ 66 (152)
T 1pc2_A 9 VSVEDLLKFEKKFQ---SEKAAGSVSKSTQFEYAWCLVR-SKYNDDIRKGIVLLEELLPKGS 66 (152)
T ss_dssp CCHHHHHHHHHHHH---HHHHTTCCCHHHHHHHHHHHHT-CSSHHHHHHHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHH---HHHccCCCcHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcCC
Confidence 44444455566666 5555 3478999999999987 3346688899999999998863
No 171
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=57.04 E-value=18 Score=26.48 Aligned_cols=43 Identities=12% Similarity=0.184 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAKGGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+.|..+|+ + .+++.+.+.+|.+|.. ..++.+|+.+|+++.+..
T Consensus 118 ~~Al~~l~---~---~~~~~~~~~l~~~~~~----~g~~~~A~~~l~~~~~~~ 160 (291)
T 3mkr_A 118 DAALRTLH---Q---GDSLECMAMTVQILLK----LDRLDLARKELKKMQDQD 160 (291)
T ss_dssp HHHHHHHT---T---CCSHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHh---C---CCCHHHHHHHHHHHHH----CCCHHHHHHHHHHHHhhC
Confidence 34555555 4 4677777777777763 346777777777776543
No 172
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=56.45 E-value=14 Score=28.12 Aligned_cols=44 Identities=11% Similarity=0.172 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 38 VKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 38 A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
|..+|+ ++... .++.+.+.||.+|.. ..++.+|+..|+++.+..
T Consensus 44 A~~~~~---~al~~~p~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~~ 89 (537)
T 3fp2_A 44 AIKYYQ---YAIELDPNEPVFYSNISACYIS----TGDLEKVIEFTTKALEIK 89 (537)
T ss_dssp CHHHHH---HHHHHCTTCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHC
T ss_pred HHHHHH---HHHhhCCCCcHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcC
Confidence 556676 54443 478888888888874 557888888888887654
No 173
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=55.95 E-value=26 Score=25.42 Aligned_cols=44 Identities=5% Similarity=-0.025 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 38 VKRWFRDTLKEAK--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 38 A~~wf~~~~kAA~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
|...|+ ++.. -+++.+.++||.+|.. ..++.+|+..|+++.+..
T Consensus 204 a~~~l~---~al~~~P~~~~~~~~la~~l~~----~g~~~~A~~~l~~~l~~~ 249 (287)
T 3qou_A 204 EIQQLQ---QQVAENPEDAALATQLALQLHQ----VGRNEEALELLFGHLRXD 249 (287)
T ss_dssp HHHHHH---HHHHHCTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHC
T ss_pred cHHHHH---HHHhcCCccHHHHHHHHHHHHH----cccHHHHHHHHHHHHhcc
Confidence 455666 5544 3689999999999984 568999999999998864
No 174
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=54.70 E-value=17 Score=27.22 Aligned_cols=49 Identities=18% Similarity=0.028 Sum_probs=37.8
Q ss_pred hHHHHHHHHHHHHHHHH----------------CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcCC
Q 033607 34 VSDCVKRWFRDTLKEAK----------------GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTRS 89 (115)
Q Consensus 34 ~~~~A~~wf~~~~kAA~----------------~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G~ 89 (115)
..+.|..+|+ ++.. ..++.+.+.+|.+|.. ..++.+|+.+|+++.+...
T Consensus 204 ~~~~A~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~~l~~~~ 268 (514)
T 2gw1_A 204 SYDKADESFT---KAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFL----KNDPLGAHEDIKKAIELFP 268 (514)
T ss_dssp HHHHHHHHHH---HHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHH----SSCHHHHHHHHHHHHHHCC
T ss_pred cHHHHHHHHH---HHHHHhhhhhccCccccccChHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHhhCc
Confidence 3566788888 5555 4567889999999884 5689999999999987553
No 175
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=54.68 E-value=15 Score=24.19 Aligned_cols=44 Identities=7% Similarity=-0.123 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHCC----CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 36 DCVKRWFRDTLKEAKGG----DINMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~G----d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
+.|..+|+ ++.... +..+.++||.+|.. ..+..+|+.+|+++..
T Consensus 125 ~~A~~~~~---~~l~~~p~~~~~~a~~~l~~~~~~----~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 125 EEALELLW---NILKVNLGAQDGEVKKTFMDILSA----LGQGNAIASKYRRQLY 172 (176)
T ss_dssp HHHHHHHH---HHHTTCTTTTTTHHHHHHHHHHHH----HCSSCHHHHHHHHHHH
T ss_pred HHHHHHHH---HHHHhCcccChHHHHHHHHHHHHH----hCCCCcHHHHHHHHHH
Confidence 55788888 666554 36699999998884 3466789999998753
No 176
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=52.32 E-value=44 Score=24.95 Aligned_cols=45 Identities=9% Similarity=0.154 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHH-----------CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 35 SDCVKRWFRDTLKEAK-----------GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~-----------~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
.+.|..+|+ +|.+ -....+..+||.+|.. ..++.+|..+|+++.+
T Consensus 67 ~~eAl~~~~---kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~----~g~~~~A~~~~~ka~~ 122 (472)
T 4g1t_A 67 NEAALECLR---KAEELIQQEHADQAEIRSLVTWGNYAWVYYH----MGRLSDVQIYVDKVKH 122 (472)
T ss_dssp HHHHHHHHH---HHHHHHHHHSGGGCTTTTHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHH---HHHHHHHhcCccccchHHHHHHHHHHHHHHH----cCChHHHHHHHHHHHH
Confidence 366888998 5533 2345678899999985 5589999999999865
No 177
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=51.02 E-value=43 Score=24.13 Aligned_cols=45 Identities=9% Similarity=-0.015 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHC---CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 36 DCVKRWFRDTLKEAKG---GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~---Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
+.|...|+ ++... .+..+.+.+|.++.. ..++.+|+..|++|.+.
T Consensus 81 ~~A~~~~~---rAl~~~~p~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~ 128 (308)
T 2ond_A 81 DEAANIYE---RAISTLLKKNMLLYFAYADYEES----RMKYEKVHSIYNRLLAI 128 (308)
T ss_dssp HHHHHHHH---HHHTTTTTTCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHTS
T ss_pred HHHHHHHH---HHHHHhCcccHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhc
Confidence 55677777 66552 466677777777663 33777777777777764
No 178
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=51.02 E-value=54 Score=22.36 Aligned_cols=46 Identities=7% Similarity=-0.068 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHCC--C---HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAKGG--D---INMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~G--d---~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
..|...|+ ++.+.- + ..+.+.||.+|.. -.++.+|+..|+++...+
T Consensus 164 ~~A~~~~~---~~l~~~p~~~~~~~a~~~l~~~~~~----~g~~~~A~~~~~~l~~~~ 214 (225)
T 2yhc_A 164 VAVVNRVE---GMLRDYPDTQATRDALPLMENAYRQ----MQMNAQAEKVAKIIAANS 214 (225)
T ss_dssp HHHHHHHH---HHHHHSTTSHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHH---HHHHHCcCCCccHHHHHHHHHHHHH----cCCcHHHHHHHHHHHhhC
Confidence 44666777 444432 3 3678888888884 557888888888777654
No 179
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=50.82 E-value=15 Score=28.68 Aligned_cols=47 Identities=6% Similarity=-0.070 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|..+|+ ++... .+..+.+++|.+|.. ..++.+|+..|++|.+..
T Consensus 148 ~~eAl~~~~---~al~l~P~~~~a~~~~g~~~~~----~g~~~eAl~~~~kal~ld 196 (382)
T 2h6f_A 148 LHEEMNYIT---AIIEEQPKNYQVWHHRRVLVEW----LRDPSQELEFIADILNQD 196 (382)
T ss_dssp HHHHHHHHH---HHHHHCTTCHHHHHHHHHHHHH----HTCCTTHHHHHHHHHHHC
T ss_pred HHHHHHHHH---HHHHHCCCCHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhC
Confidence 345666666 54443 467777777777763 346667777777776543
No 180
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=48.19 E-value=37 Score=26.21 Aligned_cols=32 Identities=6% Similarity=-0.109 Sum_probs=17.2
Q ss_pred CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 52 GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 52 Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
.+..+.+.|+.+|.. ..++.+|+.+|+++.+.
T Consensus 405 ~~~~~~~~l~~~~~~----~g~~~~A~~~~~~~~~~ 436 (597)
T 2xpi_A 405 QFGPAWIGFAHSFAI----EGEHDQAISAYTTAARL 436 (597)
T ss_dssp TCHHHHHHHHHHHHH----HTCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHh
Confidence 345555555555553 34555566666555543
No 181
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=46.82 E-value=32 Score=25.03 Aligned_cols=47 Identities=13% Similarity=0.196 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHCCCH----HHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 36 DCVKRWFRDTLKEAKGGDI----NMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~Gd~----~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
+.|..+|+..+.....++. .+.+.||.+|.. ..++.+|+.+|++|..
T Consensus 31 ~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~ 81 (373)
T 1hz4_A 31 DEAERLAKLALEELPPGWFYSRIVATSVLGEVLHC----KGELTRSLALMQQTEQ 81 (373)
T ss_dssp HHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHH----HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHh----cCcHHHHHHHHHHHHH
Confidence 4456666633222222333 255666766652 3467777777777654
No 182
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=44.97 E-value=18 Score=25.62 Aligned_cols=54 Identities=9% Similarity=-0.052 Sum_probs=38.5
Q ss_pred hhhHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCC------CCcCCHHHHHHHHHHHHhcC
Q 033607 32 EVVSDCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGY------GVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 32 ~~~~~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~------Gv~kD~~kA~~Wl~kAA~~G 88 (115)
....+.|...|+ ++.+. .++.+.++||.++..-- +....+++|+..|++|.+..
T Consensus 15 ~~~feeA~~~~~---~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ld 76 (158)
T 1zu2_A 15 ILLFEQIRQDAE---NTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLID 76 (158)
T ss_dssp HHHHHHHHHHHH---HHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HhHHHHHHHHHH---HHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhC
Confidence 334466788888 66654 59999999999887411 11134779999999998865
No 183
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=44.90 E-value=49 Score=24.02 Aligned_cols=48 Identities=2% Similarity=-0.082 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHC-C------CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 36 DCVKRWFRDTLKEAKG-G------DINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~-G------d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
+.|..+|+..++.+.. + ...+..+||.+|.. ..++.+|..+|+++...
T Consensus 110 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~al~~ 164 (373)
T 1hz4_A 110 QTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWA----WARLDEAEASARSGIEV 164 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHH
Confidence 4566677754444431 2 23566778887763 34788888888887653
No 184
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=44.38 E-value=30 Score=26.60 Aligned_cols=45 Identities=13% Similarity=-0.027 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHCCCH----HHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 37 CVKRWFRDTLKEAKGGDI----NMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 37 ~A~~wf~~~~kAA~~Gd~----~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.|+..|+ ++....++ .+.++||.++.. -.++.+|+.||+++....
T Consensus 153 dA~~~l~---~a~~~~d~~~~~~a~~~LG~al~~----LG~~~eAl~~l~~a~~g~ 201 (282)
T 4f3v_A 153 DVIDQVK---SAGKWPDKFLAGAAGVAHGVAAAN----LALFTEAERRLTEANDSP 201 (282)
T ss_dssp HHHHHHT---TGGGCSCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHTST
T ss_pred HHHHHHH---HhhccCCcccHHHHHHHHHHHHHH----CCCHHHHHHHHHHHhcCC
Confidence 3555565 44444333 489999999884 448999999999998544
No 185
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=43.06 E-value=90 Score=22.37 Aligned_cols=48 Identities=13% Similarity=0.095 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 35 SDCVKRWFRDTLKEAKGGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
.+.|...|+..++. .-.++.+...++.++.. ..++.+|+..|++|...
T Consensus 185 ~~~A~~~~~~al~~-~p~~~~~~~~~~~~~~~----~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 185 KSVAFKIFELGLKK-YGDIPEYVLAYIDYLSH----LNEDNNTRVLFERVLTS 232 (308)
T ss_dssp HHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHT----TCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHh-CCCcHHHHHHHHHHHHH----CCCHHHHHHHHHHHHhc
Confidence 34577788833332 24578888888888763 34899999999999885
No 186
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=42.23 E-value=31 Score=28.64 Aligned_cols=46 Identities=11% Similarity=0.093 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
..|..||. +|+.. ++..++..||.++.. ..|.-.|++||.+|..--
T Consensus 169 ~~A~~~Y~---~A~~~~P~~G~~~nqLavla~~----~~~~l~a~y~y~rsl~~~ 216 (497)
T 1ya0_A 169 SQAESYYR---HAAQLVPSNGQPYNQLAILASS----KGDHLTTIFYYCRSIAVK 216 (497)
T ss_dssp HHHHHHHH---HHHHHCTTBSHHHHHHHHHHHH----TTCHHHHHHHHHHHHSSS
T ss_pred HHHHHHHH---HHHHhCCCCCchHHHHHHHHhc----ccccHHHHHHHHHHHhcC
Confidence 35788999 88876 466889999999885 448889999999986533
No 187
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=41.64 E-value=54 Score=26.47 Aligned_cols=49 Identities=14% Similarity=0.009 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcCCc
Q 033607 35 SDCVKRWFRDTLKEAKGG-DINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTRSS 90 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~G-d~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G~~ 90 (115)
.+.|..+++ +|...+ ++.+...||.+|. ..-++.+|..+|.+|.+..-.
T Consensus 293 ~d~A~~~l~---rAl~Ln~s~~a~~llG~~~~----~~G~~~eA~e~~~~AlrL~P~ 342 (372)
T 3ly7_A 293 TDESYQAIN---TGIDLEMSWLNYVLLGKVYE----MKGMNREAADAYLTAFNLRPG 342 (372)
T ss_dssp HHHHHHHHH---HHHHHCCCHHHHHHHHHHHH----HTTCHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHH---HHHhcCCCHHHHHHHHHHHH----HCCCHHHHHHHHHHHHhcCCC
Confidence 355777777 554443 5555667788777 355888888888888876543
No 188
>1ny9_A Transcriptional activator TIPA-S; all alpha, globin like; NMR {Streptomyces lividans} SCOP: a.181.1.1
Probab=40.51 E-value=17 Score=24.63 Aligned_cols=38 Identities=21% Similarity=0.240 Sum_probs=26.0
Q ss_pred CcchhhHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHc
Q 033607 29 PLSEVVSDCVKRWFRDTLKEAKGGDINMQVLVGQMYFS 66 (115)
Q Consensus 29 pl~~~~~~~A~~wf~~~~kAA~~Gd~~Aq~~LG~mY~~ 66 (115)
|-.+.+...+.+|...+.+.--..++..+..||.||..
T Consensus 74 p~s~eaq~l~~~h~~~l~~~~~~~s~e~~~~L~~mYv~ 111 (143)
T 1ny9_A 74 ADSEGAMDAAEDHRQGIARNHYDCGYEMHTCLGEMYVS 111 (143)
T ss_dssp TTCHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHTTS
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhc
Confidence 44555666676776532243445799999999999985
No 189
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=40.23 E-value=60 Score=25.65 Aligned_cols=50 Identities=6% Similarity=0.003 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHCC----CHHHHHHHHHHHHcCCCC-cCCHHHHHHHHHHHHhcC
Q 033607 36 DCVKRWFRDTLKEAKGG----DINMQVLVGQMYFSGYGV-ARDAQKGRIWISRASRTR 88 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~G----d~~Aq~~LG~mY~~G~Gv-~kD~~kA~~Wl~kAA~~G 88 (115)
..|+..++ ++.+.. +..|+..||.+|..=..+ --|.++|...|++|.+..
T Consensus 180 ~~A~a~le---rAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~Ln 234 (301)
T 3u64_A 180 HAAVMMLE---RACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYC 234 (301)
T ss_dssp HHHHHHHH---HHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH---HHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhC
Confidence 35677778 776654 355999999999873211 249999999999998743
No 190
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=36.98 E-value=1.3e+02 Score=23.42 Aligned_cols=49 Identities=12% Similarity=0.085 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEAKGGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA~~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|+.+|+..++.. -.++.....++.++.. ..++.+|+.+|++|....
T Consensus 407 ~~~A~~~~e~al~~~-p~~~~~~~~~~~~~~~----~g~~~~Ar~~~~~al~~~ 455 (530)
T 2ooe_A 407 KSVAFKIFELGLKKY-GDIPEYVLAYIDYLSH----LNEDNNTRVLFERVLTSG 455 (530)
T ss_dssp HHHHHHHHHHHHHHH-TTCHHHHHHHHHHHTT----TTCHHHHHHHHHHHHHSC
T ss_pred hhHHHHHHHHHHHHC-CCCHHHHHHHHHHHHh----CCCHhhHHHHHHHHHhcc
Confidence 356788888444332 3578888888888764 348999999999998864
No 191
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=32.19 E-value=64 Score=26.78 Aligned_cols=47 Identities=6% Similarity=0.030 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHH--------H--CCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 35 SDCVKRWFRDTLKEA--------K--GGDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 35 ~~~A~~wf~~~~kAA--------~--~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
.+.|...|+ ++. . -.++.+.+.+|.+|.. ..++.+|+.+|++|.+..
T Consensus 407 ~~~A~~~~~---~al~~~~~~~~~~~p~~~~~~~~~a~~~~~----~g~~~~A~~~~~~al~~~ 463 (681)
T 2pzi_A 407 PVQTLDSLR---AARHGALDADGVDFSESVELPLMEVRALLD----LGDVAKATRKLDDLAERV 463 (681)
T ss_dssp HHHHHHHHH---HHHTC-------CCTTCSHHHHHHHHHHHH----HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH---HhhhhcccccccccccchhHHHHHHHHHHh----cCCHHHHHHHHHHHhccC
Confidence 356788888 555 2 4578999999999984 568999999999998753
No 192
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=29.60 E-value=1.5e+02 Score=20.80 Aligned_cols=48 Identities=10% Similarity=-0.025 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHCC------C-----HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhc
Q 033607 36 DCVKRWFRDTLKEAKGG------D-----INMQVLVGQMYFSGYGVARDAQKGRIWISRASRT 87 (115)
Q Consensus 36 ~~A~~wf~~~~kAA~~G------d-----~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~ 87 (115)
+.|..+|+..++-.-.- + +.+.+++|.++.. -.++.+|+..|.+|.+.
T Consensus 28 eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~----Lgr~~eAl~~~~kAL~l 86 (159)
T 2hr2_A 28 DEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAG----LRSFDEALHSADKALHY 86 (159)
T ss_dssp HHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHh
Confidence 55788888333332221 2 2389999998885 45899999999999876
No 193
>2cos_A Serine/threonine protein kinase LATS2; UBA domain, structure genomics, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=29.33 E-value=90 Score=18.78 Aligned_cols=38 Identities=8% Similarity=-0.030 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHH
Q 033607 40 RWFRDTLKEAKGGDINMQVLVGQMYFSGYGVARDAQKGRIWISRA 84 (115)
Q Consensus 40 ~wf~~~~kAA~~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kA 84 (115)
+.++ ...+.|.......+|.-...+. .++.|+.|+.|-
T Consensus 11 qmlq---~L~eMGFd~erae~Alk~Tg~~----Gle~AmewL~k~ 48 (54)
T 2cos_A 11 QMLQ---ELVNAGCDQEMAGRALKQTGSR----SIEAALEYISKM 48 (54)
T ss_dssp HHHH---HHHHHHCCHHHHHHHHHHHTSC----CHHHHHHHHHHH
T ss_pred HHHH---HHHHcCCCHHHHHHHHHHhCcc----cHHHHHHHHHHh
Confidence 4466 7777888888888888777544 478999999874
No 194
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=28.06 E-value=1.3e+02 Score=20.55 Aligned_cols=50 Identities=14% Similarity=0.082 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcCCc
Q 033607 37 CVKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTRSS 90 (115)
Q Consensus 37 ~A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G~~ 90 (115)
.+..-|. ++... -..+++|++|..+.+ -..+.|+.+++..++.-.+.+++
T Consensus 19 ~~~~~y~---~e~~~~~~s~~~~F~yAw~Lv~-S~~~~d~~~GI~lLe~l~~~~~p 70 (126)
T 1nzn_A 19 KFEKKFQ---SEKAAGSVSKSTQFEYAWCLVR-TRYNDDIRKGIVLLEELLPKGSK 70 (126)
T ss_dssp HHHHHHH---HHHHHSCCCHHHHHHHHHHHTT-SSSHHHHHHHHHHHHHHTTTSCH
T ss_pred HHHHHHH---HHhccCCCcHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcCCc
Confidence 3445555 55553 468999999999887 44577888899999988887644
No 195
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=26.53 E-value=55 Score=23.64 Aligned_cols=28 Identities=18% Similarity=0.178 Sum_probs=22.7
Q ss_pred HHHHHHHHcCCCCcCCHHHHHHHHHHHHhcCC
Q 033607 58 VLVGQMYFSGYGVARDAQKGRIWISRASRTRS 89 (115)
Q Consensus 58 ~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G~ 89 (115)
|.+|.++. ...|+.+|...|..|-++=+
T Consensus 18 YYlGr~~~----~~~~y~~A~~~L~~A~~~~~ 45 (203)
T 3t5x_A 18 YYVGRKAM----FDSDFKQAEEYLSFAFEHCH 45 (203)
T ss_dssp HHHHHHHH----HTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHH----HHhCHHHHHHHHHHHHHHCC
Confidence 66788888 58899999999999987643
No 196
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=24.08 E-value=2.1e+02 Score=20.83 Aligned_cols=46 Identities=20% Similarity=0.272 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHC-----CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 37 CVKRWFRDTLKEAKG-----GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 37 ~A~~wf~~~~kAA~~-----Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
.|...++..++.... ....+...++.+|. ...|+.+|..+|++|-.
T Consensus 153 ~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~A~~~~~~al~ 203 (434)
T 4b4t_Q 153 DSLALINDLLREFKKLDDKPSLVDVHLLESKVYH----KLRNLAKSKASLTAART 203 (434)
T ss_dssp HHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHH----HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHH----HhCcHHHHHHHHHHHHH
Confidence 455566644433322 23567888888888 36799999999988864
No 197
>2cpw_A CBL-interacting protein STS-1 variant; ubiquitin associated domain, UBA, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=23.01 E-value=1.2e+02 Score=18.18 Aligned_cols=32 Identities=16% Similarity=0.067 Sum_probs=24.7
Q ss_pred HHHHCCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHH
Q 033607 47 KEAKGGDINMQVLVGQMYFSGYGVARDAQKGRIWIS 82 (115)
Q Consensus 47 kAA~~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~ 82 (115)
+...+|....+...|.....| +|++.|+.|+-
T Consensus 25 ~L~~MGF~~~~a~~AL~~t~~----~nve~A~ewL~ 56 (64)
T 2cpw_A 25 VLLSMGFPRARAQKALASTGG----RSVQTACDWLF 56 (64)
T ss_dssp HHHHHTCCHHHHHHHHHHTTT----SCHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHHcCC----CCHHHHHHHHH
Confidence 566678888888887776543 58999999984
No 198
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=23.01 E-value=94 Score=24.88 Aligned_cols=47 Identities=13% Similarity=0.227 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHH--HCC--C---HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHh
Q 033607 36 DCVKRWFRDTLKEA--KGG--D---INMQVLVGQMYFSGYGVARDAQKGRIWISRASR 86 (115)
Q Consensus 36 ~~A~~wf~~~~kAA--~~G--d---~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~ 86 (115)
+.|..+|++.+..- ..| | +.+.++||.+|.. ..++++|..+|++|.+
T Consensus 357 ~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~----qg~~~eA~~~~~~Al~ 410 (433)
T 3qww_A 357 EGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMG----LENKAAGEKALKKAIA 410 (433)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHh----ccCHHHHHHHHHHHHH
Confidence 44666666444322 223 3 3678899999985 4489999999999975
No 199
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=21.76 E-value=62 Score=25.19 Aligned_cols=44 Identities=9% Similarity=-0.107 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHHhcC
Q 033607 38 VKRWFRDTLKEAKG--GDINMQVLVGQMYFSGYGVARDAQKGRIWISRASRTR 88 (115)
Q Consensus 38 A~~wf~~~~kAA~~--Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kAA~~G 88 (115)
+...|+ +.... .+..+.+.||.+|. ...|+++|+.|+.+....+
T Consensus 85 a~~~l~---~l~~~~~~~~~~~~~la~i~~----~~g~~eeAL~~l~~~i~~~ 130 (310)
T 3mv2_B 85 NIEELE---NLLKDKQNSPYELYLLATAQA----ILGDLDKSLETCVEGIDND 130 (310)
T ss_dssp CCHHHH---HTTTTSCCCHHHHHHHHHHHH----HHTCHHHHHHHHHHHHTSS
T ss_pred HHHHHH---HHHhcCCCCcHHHHHHHHHHH----HcCCHHHHHHHHHHHhccC
No 200
>3o10_A Sacsin; all-helical domain, homodimerization, chaperone; 1.90A {Homo sapiens}
Probab=21.53 E-value=67 Score=21.91 Aligned_cols=18 Identities=22% Similarity=0.549 Sum_probs=13.6
Q ss_pred CCcCCHHHHHHHHHHHHh
Q 033607 69 GVARDAQKGRIWISRASR 86 (115)
Q Consensus 69 Gv~kD~~kA~~Wl~kAA~ 86 (115)
|...|.+.+..||++|..
T Consensus 1 ~~~~~~ee~~~wl~~A~~ 18 (141)
T 3o10_A 1 GSVGNPVEARRWLRQARA 18 (141)
T ss_dssp CCCCCHHHHHHHHHHHHH
T ss_pred CCCCChHHHHHHHHHHHh
Confidence 344588999999999853
No 201
>2dak_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5, USP 5, UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.08 E-value=89 Score=18.47 Aligned_cols=33 Identities=15% Similarity=0.040 Sum_probs=24.6
Q ss_pred HHHHCCCHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHH
Q 033607 47 KEAKGGDINMQVLVGQMYFSGYGVARDAQKGRIWISRA 84 (115)
Q Consensus 47 kAA~~Gd~~Aq~~LG~mY~~G~Gv~kD~~kA~~Wl~kA 84 (115)
+...+|....+...|.....| |++.|+.|+-.-
T Consensus 15 ~L~~MGF~~~~a~~AL~~t~~-----nve~A~e~L~~~ 47 (63)
T 2dak_A 15 TIVSMGFSRDQALKALRATNN-----SLERAVDWIFSH 47 (63)
T ss_dssp HHHHHTCCHHHHHHHHHHTTS-----CSHHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHHcCC-----CHHHHHHHHHhC
Confidence 566678888777777766533 789999998654
No 202
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=20.25 E-value=43 Score=23.72 Aligned_cols=11 Identities=0% Similarity=0.006 Sum_probs=6.4
Q ss_pred HHHHHHHHHHh
Q 033607 76 KGRIWISRASR 86 (115)
Q Consensus 76 kA~~Wl~kAA~ 86 (115)
+|++|.++.+.
T Consensus 140 ~~r~~~~~~a~ 150 (169)
T 1ayz_A 140 RVKETVEKSWE 150 (169)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHcC
Confidence 45666666554
Done!