BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033608
(115 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5R833|ACO13_PONAB Acyl-coenzyme A thioesterase 13 OS=Pongo abelii GN=ACOT13 PE=2 SV=1
Length = 140
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 33 FERFIMQGLRVDLSEPGRVICSMKVPPRLLNAGNFMHGGATATLVDLVGSAAIFTV--GA 90
FER ++ + + + PG+VIC MKV NA +HGG TATLVD + + A+ GA
Sbjct: 21 FER-VLGKITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGA 79
Query: 91 PSVGVSVEINVSYLDAA 107
P GVSV++N++Y+ A
Sbjct: 80 P--GVSVDMNITYMSPA 94
>sp|Q9NPJ3|ACO13_HUMAN Acyl-coenzyme A thioesterase 13 OS=Homo sapiens GN=ACOT13 PE=1 SV=1
Length = 140
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 33 FERFIMQGLRVDLSEPGRVICSMKVPPRLLNAGNFMHGGATATLVDLVGSAAIFTV--GA 90
FER ++ + + + PG+VIC MKV NA +HGG TATLVD + + A+ GA
Sbjct: 21 FER-VLGKITLVSAAPGKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTMALLCTERGA 79
Query: 91 PSVGVSVEINVSYLDAA 107
P GVSV++N++Y+ A
Sbjct: 80 P--GVSVDMNITYMSPA 94
>sp|Q9CQR4|ACO13_MOUSE Acyl-coenzyme A thioesterase 13 OS=Mus musculus GN=Acot13 PE=1 SV=1
Length = 140
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 33 FERFIMQGLRVDLSEPGRVICSMKVPPRLLNAGNFMHGGATATLVDLVGSAAIFTV--GA 90
F+R +++ + + + P ++IC MKV + N +HGG TATLVD + + A+ GA
Sbjct: 21 FDR-VLEKVTLVSAAPEKLICEMKVEEQHTNKLGTLHGGLTATLVDSISTMALMCTERGA 79
Query: 91 PSVGVSVEINVSYLDAA 107
P GVSV++N++Y+ A
Sbjct: 80 P--GVSVDMNITYMSPA 94
>sp|P87304|YB22_SCHPO Putative esterase C31F10.02 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPBC31F10.02 PE=3 SV=1
Length = 161
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%)
Query: 30 TKFFERFIMQGLRVDLSEPGRVICSMKVPPRLLNAGNFMHGGATATLVDLVGSAAIFTVG 89
T F+ ++ +++ + PG V CS+K+ LN +HGG A L DL GS A+ + G
Sbjct: 24 TNGFDAHVVSDIQIISAVPGFVECSLKLQKHHLNRMGNLHGGCIAALTDLGGSLALASRG 83
Query: 90 APSVGVSVEINVSYLDA 106
GVS+++N ++L +
Sbjct: 84 LFISGVSIDMNQTFLQS 100
>sp|P34419|YLZ6_CAEEL Putative esterase F42H10.6 OS=Caenorhabditis elegans GN=F42H10.6
PE=1 SV=2
Length = 169
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 50 RVICSMKVPPRLLNAGNFMHGGATATLVDLVGSAAIFTVGAPSVGVSVEINVSYL 104
+++C M V + LN+ +HGG TATL D++ + A+ SVE+ VSYL
Sbjct: 53 KLVCEMVVQHQHLNSKGTLHGGQTATLTDVITARAVGVTVKDKGMASVELAVSYL 107
>sp|O28020|Y2264_ARCFU Putative esterase AF_2264 OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_2264 PE=3 SV=1
Length = 154
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 36 FIMQGLRVDLSEPGRVICSMKVPPRLLNAGNFMHGGATATLVDLVGSAAIFTVGAPSVGV 95
F + R+ + G M V LNA N HGG +L DL + A + G + +
Sbjct: 33 FELLDARILEMKEGYAKVEMVVKKEHLNAANVCHGGIIFSLADLAFALASNSHG--KLAL 90
Query: 96 SVEINVSYLDAAFGGVK 112
++E++++Y+ AA+ G K
Sbjct: 91 AIEVSITYMKAAYEGEK 107
>sp|P95914|Y2140_SULSO Putative esterase SSO2140 OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=SSO2140 PE=3 SV=1
Length = 140
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 39/88 (44%)
Query: 23 STMEEMPTKFFERFIMQGLRVDLSEPGRVICSMKVPPRLLNAGNFMHGGATATLVDLVGS 82
+EE+ K + F ++V E GR + + G +HGG + +D+ G
Sbjct: 6 KAIEEIFKKADQIFKFLDVKVINLEKGRAVVEIPYKEEFTRRGGVLHGGIIMSAIDITGG 65
Query: 83 AAIFTVGAPSVGVSVEINVSYLDAAFGG 110
A TV V+ E+ +++L+ + G
Sbjct: 66 LAALTVNDAMDQVTQELKINFLEPMYKG 93
>sp|Q97YR6|Y1253_SULSO Putative esterase SSO1253 OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=SSO1253 PE=3 SV=1
Length = 150
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 32/71 (45%)
Query: 34 ERFIMQGLRVDLSEPGRVICSMKVPPRLLNAGNFMHGGATATLVDLVGSAAIFTVGAPSV 93
E F G+ + E G +L G +HGG + VD GS A+ T+
Sbjct: 23 EIFNFIGIEFEKLEKGYSRLKFNFNEKLTRIGGILHGGVVFSAVDYAGSYAVRTLDKVKD 82
Query: 94 GVSVEINVSYL 104
GV+ E+ +++L
Sbjct: 83 GVTAELKINFL 93
>sp|Q566R0|THEM4_RAT Acyl-coenzyme A thioesterase THEM4 OS=Rattus norvegicus GN=Them4
PE=2 SV=1
Length = 230
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 50 RVICSMKVPPRLLNAGNFMHGGATATLVDLVGSAAIFTVGAPSVGVSVEINVSY 103
R++C + L F+HGGA AT++D+ F+ G + ++ +N+ Y
Sbjct: 124 RIVCLFQGGLHLQGMPGFVHGGAIATIIDITAGMCAFSEG---IVMTANLNIDY 174
>sp|Q5T1C6|THEM4_HUMAN Acyl-coenzyme A thioesterase THEM4 OS=Homo sapiens GN=THEM4 PE=1
SV=1
Length = 240
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 50 RVICSMKVPPRLLNAGNFMHGGATATLVD-LVGSAAIFTVGAPSVGVSVEINVSY 103
R++C + P L F+HGGA AT++D VG A+ G + ++ +N++Y
Sbjct: 133 RMVCLFQGGPYLEGPPGFIHGGAIATMIDATVGMCAMMAGG---IVMTANLNINY 184
>sp|Q9CMM9|Y788_PASMU Putative esterase PM0788 OS=Pasteurella multocida (strain Pm70)
GN=PM0788 PE=3 SV=1
Length = 139
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Query: 20 KNKSTMEEMPTKFFERFIMQGLRVDLSEPGR--VICSMKVPPRLLNAGNFMHGGATATLV 77
K K T+E+M + + L + S G + +M V R + F+HGG + L
Sbjct: 4 KKKYTLEQM-NLLSQNTAISHLAIQFSAQGENWLEATMPVDQRTIQPMGFLHGGLSVALA 62
Query: 78 DLVGSAAIF-TVGAPSVGVSVEINVSYLDAAFGGVKRLR 115
+ +GS A F + + +EIN ++L G+ R
Sbjct: 63 ETIGSMAGFCCITENQFVLGLEINANHLRPVKQGIVTAR 101
>sp|Q6GLK2|THEM4_XENLA Acyl-coenzyme A thioesterase THEM4 OS=Xenopus laevis GN=them4 PE=2
SV=2
Length = 222
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 50 RVICSMKVPPRLLNAGNFMHGGATATLVD-LVGSAAIFTVG 89
R++C + P L F HGG AT++D G+ A++ G
Sbjct: 120 RMVCLFQPGPYLEGPPGFTHGGCIATMIDSTTGAGAVYLCG 160
>sp|Q976X8|Y061_SULTO Putative esterase STK_00610 OS=Sulfolobus tokodaii (strain DSM
16993 / JCM 10545 / NBRC 100140 / 7) GN=STK_00610 PE=3
SV=1
Length = 138
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 47 EPGRVICSMKVPPRLLNAGNFMHGGATATLVDLVGSAAIFTVGAPSVGVSVEINVSYLDA 106
+PG + GN ++GG T +D G A +V V+ E+ V++L+
Sbjct: 25 KPGYSKIQIPYKEEFCRRGNVLNGGIIMTAIDFAGGLATLSVNDGIDQVTQELKVNFLEP 84
Query: 107 AFGG 110
+ G
Sbjct: 85 MYKG 88
>sp|Q9KM09|Y3380_VIBCH Putative esterase VC_A0580 OS=Vibrio cholerae serotype O1 (strain
ATCC 39315 / El Tor Inaba N16961) GN=VC_A0580 PE=3 SV=2
Length = 150
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 67 FMHGGATATLVDLVGS-AAIFTVGAPSVGVSVEINVSYLDA 106
+HGGA+ L + +GS AA F+VG + V ++IN +++ A
Sbjct: 53 MLHGGASVVLAETLGSVAANFSVGEDAYCVGLDINANHVRA 93
>sp|Q3UUI3|THEM4_MOUSE Acyl-coenzyme A thioesterase THEM4 OS=Mus musculus GN=Them4 PE=1
SV=1
Length = 230
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Query: 67 FMHGGATATLVDL-VGSAAIFTVGAPSVGVSVEINVSY 103
F+HGGA AT++D+ G+ AI + V ++ +N++Y
Sbjct: 141 FVHGGAIATIIDVTTGTCAI----SEGVAMTANLNITY 174
>sp|P77781|YDII_ECOLI Esterase YdiI OS=Escherichia coli (strain K12) GN=ydiI PE=1 SV=1
Length = 136
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 54 SMKVPPRLLNAGNFMHGGATATLVDLVGSAA--IFTVGAPSVGVSVEINVSYLDAAFGGV 111
+M V R +HGGA+ L + +GS A + T G V V +EIN +++ +A G
Sbjct: 39 TMPVDSRTKQPFGLLHGGASVVLAESIGSVAGYLCTEGEQKV-VGLEINANHVRSAREGR 97
Query: 112 KR 113
R
Sbjct: 98 VR 99
>sp|Q1J0P6|RPOB_DEIGD DNA-directed RNA polymerase subunit beta OS=Deinococcus
geothermalis (strain DSM 11300) GN=rpoB PE=3 SV=1
Length = 1152
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Query: 42 RVDLSEPGRVICSMKVPPR-------LLNAGNFMHGGATAT---LVDLVGSAAIFTVGAP 91
R DL EPGR + K+ R G F G T L+ L T+GA
Sbjct: 273 RYDLGEPGRFKMNTKLGTRRQDRTLLTFEDGRFGDAGLVDTIRYLMALQQGLETVTMGAD 332
Query: 92 SVGVSVEINVSYLDAAFGGVKRLR 115
GV++E+ V+ D G +R+R
Sbjct: 333 EDGVAIEVPVTEDDIDHLGNRRVR 356
>sp|Q1E1H4|NST1_COCIM Stress response protein NST1 OS=Coccidioides immitis (strain RS)
GN=NST1 PE=3 SV=2
Length = 1235
Score = 29.3 bits (64), Expect = 7.1, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 17 DDDK-NKSTMEEMPTKFFERFIMQGLRVDLSEPGRVICSMKVPPRLLNAGNFMHGGATAT 75
D+ K N+ ++E+ T+ ++ + L+ P S +PP L AG G +
Sbjct: 979 DESKTNQQEIDELSTQLGSSALLDDSDIPLTAPPSQPLSSALPPGLPGAGRIGFAGPSLF 1038
Query: 76 LVDLVGSAAIFTVGAPSVG 94
L S F++GAP G
Sbjct: 1039 SDHLGSSKPHFSLGAPGSG 1057
>sp|P20378|Y1336_HALSA Putative esterase VNG_1336C OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=VNG_1336C PE=3 SV=1
Length = 151
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 40 GLRVDLSEPGRVICSMKVPPRLLNAG---NFMHGGATATLVDLVGSAAIFTVGAPSVGVS 96
G+ V+ + G + + +L N G +HGG ATL+D G A+ + V +
Sbjct: 27 GVSVEDASDGEMRLRIPYHEKLTNHGPGEGDVHGGIAATLIDTAGGLAVRSALPKPVAAN 86
Query: 97 V---EINVSYLDAAFG 109
V ++NVSYL A G
Sbjct: 87 VATIDLNVSYLRPARG 102
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,727,392
Number of Sequences: 539616
Number of extensions: 1722020
Number of successful extensions: 3953
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 3936
Number of HSP's gapped (non-prelim): 31
length of query: 115
length of database: 191,569,459
effective HSP length: 83
effective length of query: 32
effective length of database: 146,781,331
effective search space: 4697002592
effective search space used: 4697002592
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)