BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033610
(115 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q65WT0|BD31B_ORYSJ Protein BUD31 homolog 2 OS=Oryza sativa subsp. japonica
GN=Os05g0446300 PE=2 SV=1
Length = 145
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 74/94 (78%), Positives = 88/94 (93%)
Query: 1 MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYI 60
MPK++T+R KYP+GWELI PTLR++EAKMREAENDPHDGKRKCE LWPIF+I+HQ+S+YI
Sbjct: 1 MPKIKTSRVKYPEGWELIEPTLRDLEAKMREAENDPHDGKRKCEALWPIFRISHQKSRYI 60
Query: 61 FELYYKRNEISKELYEFCLDQGYGDSNLIAKWKK 94
++LYY+R EISKELYEFCLDQG+ D NLIAKWKK
Sbjct: 61 YDLYYRRKEISKELYEFCLDQGHADKNLIAKWKK 94
>sp|Q94DE2|BD31A_ORYSJ Protein BUD31 homolog 1 OS=Oryza sativa subsp. japonica
GN=Os01g0857700 PE=2 SV=1
Length = 145
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 74/94 (78%), Positives = 86/94 (91%)
Query: 1 MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYI 60
MPK++T+R KYP GWELI PT+RE++AKMREAEND HDGKRKCE LWPIF+I+HQRS+YI
Sbjct: 1 MPKIKTSRVKYPGGWELIEPTIRELDAKMREAENDTHDGKRKCEALWPIFRISHQRSRYI 60
Query: 61 FELYYKRNEISKELYEFCLDQGYGDSNLIAKWKK 94
++LYY+R EISKELYEFCLDQGY D NLIAKWKK
Sbjct: 61 YDLYYRRKEISKELYEFCLDQGYADRNLIAKWKK 94
>sp|P35682|BD31C_ORYSJ Protein BUD31 homolog 3 OS=Oryza sativa subsp. japonica
GN=Os12g0149800 PE=2 SV=2
Length = 145
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 71/94 (75%), Positives = 83/94 (88%)
Query: 1 MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYI 60
MPK++T+ KYPDGWELI PTL E+ +KMREAENDPHDG+RKCE LWPIFKI HQRS+Y+
Sbjct: 1 MPKIKTSGVKYPDGWELIEPTLSELHSKMREAENDPHDGRRKCEALWPIFKINHQRSRYL 60
Query: 61 FELYYKRNEISKELYEFCLDQGYGDSNLIAKWKK 94
++LYY R EIS+ELYEFCLDQG+ D NLIAKWKK
Sbjct: 61 YDLYYNRKEISQELYEFCLDQGHADRNLIAKWKK 94
>sp|O70454|BUD31_RAT Protein BUD31 homolog OS=Rattus norvegicus GN=Bud31 PE=2 SV=2
Length = 144
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 62/94 (65%), Positives = 79/94 (84%)
Query: 1 MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYI 60
MPKV+ +R PDGWELI PTL E++ KMREAE +PH+GKRK E+LWPIF+I HQ+++YI
Sbjct: 1 MPKVKRSRKAPPDGWELIEPTLDELDQKMREAETEPHEGKRKVESLWPIFRIHHQKTRYI 60
Query: 61 FELYYKRNEISKELYEFCLDQGYGDSNLIAKWKK 94
F+L+YKR IS+ELYE+C+ +GY D NLIAKWKK
Sbjct: 61 FDLFYKRKAISRELYEYCIKEGYADKNLIAKWKK 94
>sp|P41223|BUD31_HUMAN Protein BUD31 homolog OS=Homo sapiens GN=BUD31 PE=1 SV=2
Length = 144
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 62/94 (65%), Positives = 79/94 (84%)
Query: 1 MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYI 60
MPKV+ +R PDGWELI PTL E++ KMREAE +PH+GKRK E+LWPIF+I HQ+++YI
Sbjct: 1 MPKVKRSRKAPPDGWELIEPTLDELDQKMREAETEPHEGKRKVESLWPIFRIHHQKTRYI 60
Query: 61 FELYYKRNEISKELYEFCLDQGYGDSNLIAKWKK 94
F+L+YKR IS+ELYE+C+ +GY D NLIAKWKK
Sbjct: 61 FDLFYKRKAISRELYEYCIKEGYADKNLIAKWKK 94
>sp|Q2NKU3|BUD31_BOVIN Protein BUD31 homolog OS=Bos taurus GN=BUD31 PE=2 SV=1
Length = 144
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 62/94 (65%), Positives = 79/94 (84%)
Query: 1 MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYI 60
MPKV+ +R PDGWELI PTL E++ KMREAE +PH+GKRK E+LWPIF+I HQ+++YI
Sbjct: 1 MPKVKRSRKAPPDGWELIEPTLDELDQKMREAETEPHEGKRKVESLWPIFRIHHQKTRYI 60
Query: 61 FELYYKRNEISKELYEFCLDQGYGDSNLIAKWKK 94
F+L+YKR IS+ELYE+C+ +GY D NLIAKWKK
Sbjct: 61 FDLFYKRKAISRELYEYCIKEGYADKNLIAKWKK 94
>sp|P12805|BUD31_XENLA Protein BUD31 homolog OS=Xenopus laevis GN=bud31 PE=2 SV=1
Length = 144
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 62/94 (65%), Positives = 79/94 (84%)
Query: 1 MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYI 60
MPKV+ +R PDGWELI PTL E++ KMREAE DPH+GKRK E+LWPIF+I HQ+++YI
Sbjct: 1 MPKVKRSRKPPPDGWELIEPTLDELDQKMREAETDPHEGKRKVESLWPIFRIHHQKTRYI 60
Query: 61 FELYYKRNEISKELYEFCLDQGYGDSNLIAKWKK 94
F+L+YKR IS+ELY++C+ +GY D NLIAKWKK
Sbjct: 61 FDLFYKRKAISRELYDYCIREGYADKNLIAKWKK 94
>sp|Q962X9|BUD31_BRABE Protein BUD31 homolog OS=Branchiostoma belcheri PE=2 SV=1
Length = 144
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 63/94 (67%), Positives = 77/94 (81%)
Query: 1 MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYI 60
MPKVR +R P+GWELI PTL E++ KMREAE +PH+GKRK E LWPIFKI HQ+S+YI
Sbjct: 1 MPKVRRSRKPPPEGWELIEPTLDELDQKMREAETEPHEGKRKVEALWPIFKIHHQKSRYI 60
Query: 61 FELYYKRNEISKELYEFCLDQGYGDSNLIAKWKK 94
F+L+Y+R IS+ELYE+CL +G D NLIAKWKK
Sbjct: 61 FDLFYRRKAISRELYEYCLKEGIADKNLIAKWKK 94
>sp|Q567Z7|BUD31_DANRE Protein BUD31 homolog OS=Danio rerio GN=bud31 PE=2 SV=1
Length = 144
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 61/94 (64%), Positives = 78/94 (82%)
Query: 1 MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYI 60
MPKV+ +R PDGWEL+ PTL E++ KMREAE +PH+GKRK E+LWPIF++ HQRS+YI
Sbjct: 1 MPKVKRSRKPPPDGWELVEPTLDELDQKMREAETEPHEGKRKVESLWPIFRLHHQRSRYI 60
Query: 61 FELYYKRNEISKELYEFCLDQGYGDSNLIAKWKK 94
F+L+YKR IS+ELY++C+ GY D NLIAKWKK
Sbjct: 61 FDLFYKRKAISRELYKYCIRGGYADKNLIAKWKK 94
>sp|P34313|BUD31_CAEEL Protein BUD31 homolog OS=Caenorhabditis elegans GN=C07A9.2 PE=2
SV=1
Length = 147
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 73/92 (79%)
Query: 3 KVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYIFE 62
K+R R P+GW+LI PTL + EAKMREAE +PH+GKRK E WPIF+I HQRS+Y+++
Sbjct: 6 KLRRVRKSPPEGWDLIEPTLEQFEAKMREAETEPHEGKRKTEINWPIFRIHHQRSRYVYD 65
Query: 63 LYYKRNEISKELYEFCLDQGYGDSNLIAKWKK 94
+YYK+ EIS+ELYEFCL + D+ LIAKWKK
Sbjct: 66 MYYKKAEISRELYEFCLTAKFADAALIAKWKK 97
>sp|O74772|CWF14_SCHPO Pre-mRNA-splicing factor cwf14 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cwf14 PE=1 SV=1
Length = 146
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 68/95 (71%), Gaps = 2/95 (2%)
Query: 1 MPKVRTNRTKYP-DGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQY 59
MP++RT+RTK P DG++ I PTL E + +MR+ EN G K E L PIF++ HQRS+Y
Sbjct: 1 MPRLRTSRTKRPPDGFDEIEPTLIEFQDRMRQIENTMGKGT-KTEMLAPIFQLHHQRSRY 59
Query: 60 IFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKK 94
I++LYYKR IS ELY + L Q Y D NLIAKWKK
Sbjct: 60 IYDLYYKREAISTELYNWLLKQNYADGNLIAKWKK 94
>sp|P25337|BUD31_YEAST Pre-mRNA-splicing factor BUD31 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=BUD31 PE=1 SV=1
Length = 157
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 66/98 (67%), Gaps = 3/98 (3%)
Query: 1 MPKVRTNRTK-YPDGWELIAPTLREMEAKMREAENDPHD--GKRKCETLWPIFKIAHQRS 57
MP+++T R+K PDG+E I PTL + E ++R+A+ D + E LW I ++ HQRS
Sbjct: 1 MPRIKTRRSKPAPDGFEKIKPTLTDFEIQLRDAQKDKSSKLAAKSNEQLWEIMQLHHQRS 60
Query: 58 QYIFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKV 95
+YI+ LYYKR ISK+LY++ + + Y D LIAKW+K
Sbjct: 61 RYIYTLYYKRKAISKDLYDWLIKEKYADKLLIAKWRKT 98
>sp|Q6PGH1|BUD31_MOUSE Protein BUD31 homolog OS=Mus musculus GN=Bud31 PE=2 SV=1
Length = 103
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 43/94 (45%), Gaps = 41/94 (43%)
Query: 1 MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYI 60
MPKV+ +R PDGWELI PTL E++ KMRE
Sbjct: 1 MPKVKRSRKAPPDGWELIEPTLDELDQKMRE----------------------------- 31
Query: 61 FELYYKRNEISKELYEFCLDQGYGDSNLIAKWKK 94
ELYE+C+ +GY D NLIAKWKK
Sbjct: 32 ------------ELYEYCIKEGYADKNLIAKWKK 53
>sp|Q5AZY1|MRH4_EMENI ATP-dependent RNA helicase mrh4, mitochondrial OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=mrh4 PE=3 SV=1
Length = 630
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 7/51 (13%)
Query: 8 RTKYPDGWELIAPTL----REMEAKMREAENDPHDGKRK---CETLWPIFK 51
R YPD W L P L R ++ + + + DP+ G R + +W I K
Sbjct: 398 RKLYPDIWRLTTPNLHAIPRRVQLGVVDIQKDPYRGNRNLACADVIWSIGK 448
>sp|Q03001|DYST_HUMAN Dystonin OS=Homo sapiens GN=DST PE=1 SV=4
Length = 7570
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 16/82 (19%)
Query: 15 WELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEISKEL 74
W+ ++E E K++E+ K + ETLWP + + + + E
Sbjct: 4936 WDTFNKQVKERENKLKESLEKALKYKEQVETLWP---------------WIDKCQNNLEE 4980
Query: 75 YEFCLDQGYGDSNLIAKWKKVH 96
+FCLD G+ N IAK K +
Sbjct: 4981 IKFCLDPAEGE-NSIAKLKSLQ 5001
>sp|Q57620|ACDB2_METJA Acetyl-CoA decarbonylase/synthase complex subunit beta 2
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=cdhC2
PE=3 SV=1
Length = 469
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 62 ELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKVHTCSSFMNK--LCKGVSYL 112
E+Y KR+E +K L+E +D YG + + H C ++ LC G++YL
Sbjct: 164 EIYNKRDEKTKALHEEDVDVFYG-CVMCQSFAPTHVCVITPDRPALCGGINYL 215
>sp|O70075|Y1391_AQUAE Uncharacterized protein aq_1391/aq_1640/aq_aa40 OS=Aquifex aeolicus
(strain VF5) GN=aq_1391 PE=4 SV=1
Length = 321
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 11/76 (14%)
Query: 11 YPDGWELIAPTLREMEAKMREAENDPHDGKR----------KCETLWPIFKIAHQRSQYI 60
Y D L+ L+E+ + R D + GK + E++ P+ AH R + +
Sbjct: 178 YADENMLLRSMLKELGFRARYFLGDAYYGKSAGVLEEIKKLRMESIVPVRDTAHTRVRNM 237
Query: 61 FELYYKRN-EISKELY 75
+ L+ KRN EI +++Y
Sbjct: 238 YRLWAKRNYEIRRKVY 253
>sp|Q8ZTP4|SYS_PYRAE Serine--tRNA ligase OS=Pyrobaculum aerophilum (strain ATCC 51768 /
IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=serS PE=3
SV=1
Length = 451
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 21/98 (21%)
Query: 18 IAPTLREMEAKMREAENDPHDGKR-KCETLWPIFKIAHQRSQYIFELYYKRNEISKELYE 76
IA RE+ A++ AE + + +R + E LW + H E
Sbjct: 72 IADKARELAARLERAEKELEETERAREEVLWSFPNLIH------------------ESVP 113
Query: 77 FCLDQGYGDSNLIAKWKKVHTCSSFMNKLCKGVSYLFT 114
C +G DS + W V T ++KL KGV YL
Sbjct: 114 IC-PEGV-DSIPVRHWGVVKTTKDVVDKLDKGVDYLVV 149
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,152,048
Number of Sequences: 539616
Number of extensions: 1664319
Number of successful extensions: 3538
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 3521
Number of HSP's gapped (non-prelim): 26
length of query: 115
length of database: 191,569,459
effective HSP length: 83
effective length of query: 32
effective length of database: 146,781,331
effective search space: 4697002592
effective search space used: 4697002592
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)