BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033611
(115 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C9G6|U195A_ARATH MIP18 family protein At1g68310 OS=Arabidopsis thaliana GN=At1g68310
PE=2 SV=2
Length = 157
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 81/112 (72%), Positives = 98/112 (87%), Gaps = 1/112 (0%)
Query: 1 MVSGLINANPVVYEKKERRARSASSCVNDEYAAEQIDQQEVFDHVRDIKDPEHPYSLEEL 60
MVSGLIN NP++Y KKERR R+ +S + DE E IDQ E+FDH+RDIKDPEHP +LE+L
Sbjct: 1 MVSGLINENPIIYPKKERRLRTDTS-ITDELTPEPIDQLEIFDHIRDIKDPEHPNTLEDL 59
Query: 61 KVITEDAIEVDDERSYVRVTFTPTVEHCSMATVIGLCLRVKLMRSLPPRFKV 112
+V+TED++EVDDE SYVRVTFTPTVEHCSMATVIGLC+RVKL+RSLP R+K+
Sbjct: 60 RVVTEDSVEVDDENSYVRVTFTPTVEHCSMATVIGLCVRVKLLRSLPSRYKI 111
>sp|Q9VTC4|U195A_DROME MIP18 family protein CG7949 OS=Drosophila melanogaster GN=CG7949
PE=1 SV=1
Length = 156
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 82/112 (73%), Gaps = 2/112 (1%)
Query: 1 MVSGLINANPVVYEKKERRARSASSCVNDEYAAEQIDQQEVFDHVRDIKDPEHPYSLEEL 60
M + + N NP VY++ + R +A+ DE + D++E+FD +R+I DPEHP +LEEL
Sbjct: 1 MPTEIENINPNVYDRIKERVLTANE--EDENVPDPFDKREIFDLIRNINDPEHPLTLEEL 58
Query: 61 KVITEDAIEVDDERSYVRVTFTPTVEHCSMATVIGLCLRVKLMRSLPPRFKV 112
V+ ED I ++D ++ V ++FTPT+ HCSMAT+IGL +RVKL+RSLPPRFKV
Sbjct: 59 HVVQEDLIRINDSQNSVHISFTPTIPHCSMATLIGLSIRVKLLRSLPPRFKV 110
>sp|O62252|U195_CAEEL MIP18 family protein F45G2.10 OS=Caenorhabditis elegans GN=F45G2.10
PE=1 SV=1
Length = 160
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 79/110 (71%), Gaps = 3/110 (2%)
Query: 5 LINANPVVYEKKERRARSASSCVNDEYAAEQIDQQEVFDHVRDIKDPEHPYSLEELKVIT 64
L NANP +++ K R R + DE + ID E+FD +RDI DPEHPY+LE+L V+
Sbjct: 6 LDNANPTLFDSKPRH-RPVTGTERDESVEDPIDSWEIFDLIRDINDPEHPYTLEQLNVVQ 64
Query: 65 EDAIEV--DDERSYVRVTFTPTVEHCSMATVIGLCLRVKLMRSLPPRFKV 112
E+ I+V D+E ++V+V FTPT+ HCSMAT+IGL +RVKL+RSL P+ KV
Sbjct: 65 EELIKVFIDEEETFVKVNFTPTIPHCSMATLIGLAIRVKLLRSLHPKVKV 114
>sp|Q9SR25|U195B_ARATH MIP18 family protein At3g09380 OS=Arabidopsis thaliana GN=At3g09380
PE=2 SV=2
Length = 149
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 81/113 (71%), Gaps = 10/113 (8%)
Query: 1 MVSGLINANPVVYEKKERRARSASSCVNDEYAAEQIDQQEVFDHVRDIKDPEHP-YSLEE 59
M S L N NP++Y K+ RR R+ S DE+++ + +RDIKDPEHP SLE+
Sbjct: 1 MDSVLTNKNPIIYPKRTRRYRTDQSST-DEFSST--------NRIRDIKDPEHPELSLED 51
Query: 60 LKVITEDAIEVDDERSYVRVTFTPTVEHCSMATVIGLCLRVKLMRSLPPRFKV 112
L V+TE+++EVDD +SYVR+TFTPT+ HC + T IGLC+ VKL++SLP RFKV
Sbjct: 52 LNVLTEESVEVDDHKSYVRITFTPTLPHCHLPTHIGLCILVKLVQSLPARFKV 104
>sp|Q9D187|MIP18_MOUSE Mitotic spindle-associated MMXD complex subunit MIP18 OS=Mus
musculus GN=Fam96b PE=2 SV=1
Length = 163
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 75/108 (69%), Gaps = 2/108 (1%)
Query: 5 LINANPVVYEKKERRARSASSCVNDEYAAEQIDQQEVFDHVRDIKDPEHPYSLEELKVIT 64
L NANP++YE+ R +A DE + ID +E+FD +R I DPEHP +LEEL V+
Sbjct: 12 LENANPLIYERSGERPVTAGE--EDEEVPDSIDAREIFDLIRSINDPEHPLTLEELNVVE 69
Query: 65 EDAIEVDDERSYVRVTFTPTVEHCSMATVIGLCLRVKLMRSLPPRFKV 112
+ I+V D S V V FTPT+ HCSMAT+IGL ++VKL+RSLP RFK+
Sbjct: 70 QVRIQVSDPESTVAVAFTPTIPHCSMATLIGLSIKVKLLRSLPQRFKM 117
>sp|Q9Y3D0|MIP18_HUMAN Mitotic spindle-associated MMXD complex subunit MIP18 OS=Homo
sapiens GN=FAM96B PE=1 SV=1
Length = 163
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 75/108 (69%), Gaps = 2/108 (1%)
Query: 5 LINANPVVYEKKERRARSASSCVNDEYAAEQIDQQEVFDHVRDIKDPEHPYSLEELKVIT 64
L NANP++Y++ R +A DE + ID +E+FD +R I DPEHP +LEEL V+
Sbjct: 12 LENANPLIYQRSGERPVTAGE--EDEQVPDSIDAREIFDLIRSINDPEHPLTLEELNVVE 69
Query: 65 EDAIEVDDERSYVRVTFTPTVEHCSMATVIGLCLRVKLMRSLPPRFKV 112
+ ++V D S V V FTPT+ HCSMAT+IGL ++VKL+RSLP RFK+
Sbjct: 70 QVRVQVSDPESTVAVAFTPTIPHCSMATLIGLSIKVKLLRSLPQRFKM 117
>sp|Q54QK1|FA96B_DICDI MIP18 family protein FAM96B OS=Dictyostelium discoideum GN=fam96B
PE=3 SV=2
Length = 163
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 72/115 (62%), Gaps = 10/115 (8%)
Query: 7 NANPVVY---------EKKERRARSASSCVNDEYAAEQIDQQEVFDHVRDIKDPEHPYSL 57
N NPV+Y E E S+ + +E ++ D+QE+FD VR I DPEHP +L
Sbjct: 4 NPNPVIYVDNENCKSFEDNENSFNSSRYSI-EEDQIDEFDEQEIFDLVRSITDPEHPLTL 62
Query: 58 EELKVITEDAIEVDDERSYVRVTFTPTVEHCSMATVIGLCLRVKLMRSLPPRFKV 112
E+L V+ + + ++ E SY+ + FTPTV HCSMA +IGL ++ KL RSLP RFKV
Sbjct: 63 EQLNVVRIENVNINLENSYILLYFTPTVPHCSMANLIGLSIKEKLARSLPKRFKV 117
>sp|Q9UTL0|YIVG_SCHPO MIP18 family protein C144.16 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC144.16 PE=3 SV=1
Length = 179
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 73/133 (54%), Gaps = 21/133 (15%)
Query: 1 MVSGLINANPVVYEKKERRAR---------SASSCVNDEYAAEQ---------IDQQEVF 42
M + L N NP V E + +R S++ E +EQ ID QE++
Sbjct: 1 MSANLQNENPEVKELNQLPSRVEEEEDLLLSSTKQWLTEIESEQTNIKEERDPIDPQEIY 60
Query: 43 DHVRDIKDPEHPYSLEELKVITEDAIEVDDE---RSYVRVTFTPTVEHCSMATVIGLCLR 99
D + I DPEHP +L +L V+ + IEV D SY+ V TPT+ HCSM T+IGLC+R
Sbjct: 61 DLLAKINDPEHPLTLAQLSVVKLEDIEVVDNVEGDSYITVHITPTIPHCSMCTLIGLCIR 120
Query: 100 VKLMRSLPPRFKV 112
V+L R LPPRF V
Sbjct: 121 VRLERCLPPRFHV 133
>sp|P38829|YHS2_YEAST MIP18 family protein YHR122W OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YHR122W PE=1 SV=1
Length = 231
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 5/101 (4%)
Query: 17 ERRARSASSCVNDEYAAEQIDQQEVFDHVRDIKDPEHPYSLEELKVITEDAIEVDD---- 72
E S + +E + ID QE++D + I DPEHP SL +L V+ + I+V D
Sbjct: 85 ESEDESVAGGGKEEEEPDLIDAQEIYDLIAHISDPEHPLSLGQLSVVNLEDIDVHDSGNQ 144
Query: 73 -ERSYVRVTFTPTVEHCSMATVIGLCLRVKLMRSLPPRFKV 112
E + V + TPT+ HCS+AT+IGL +RV+L RSLPPRF++
Sbjct: 145 NEMAEVVIKITPTITHCSLATLIGLGIRVRLERSLPPRFRI 185
>sp|Q9H5X1|FA96A_HUMAN MIP18 family protein FAM96A OS=Homo sapiens GN=FAM96A PE=1 SV=1
Length = 160
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 57/76 (75%), Gaps = 3/76 (3%)
Query: 40 EVFDHVRDIKDPEHPYSLEELKVITEDAIEV---DDERSYVRVTFTPTVEHCSMATVIGL 96
EV+D +R I+DPE P +LEEL+V++E +EV ++E V + FTPTV HCS+AT+IGL
Sbjct: 39 EVYDLIRTIRDPEKPNTLEELEVVSESCVEVQEINEEEYLVIIRFTPTVPHCSLATLIGL 98
Query: 97 CLRVKLMRSLPPRFKV 112
CLRVKL R LP + K+
Sbjct: 99 CLRVKLQRCLPFKHKL 114
>sp|Q9DCL2|FA96A_MOUSE MIP18 family protein FAM96A OS=Mus musculus GN=Fam96a PE=2 SV=1
Length = 160
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 57/76 (75%), Gaps = 3/76 (3%)
Query: 40 EVFDHVRDIKDPEHPYSLEELKVITEDAIEVD--DERSY-VRVTFTPTVEHCSMATVIGL 96
EV+D +R I+DPE P +LEEL+V+TE +EV +E Y V + FTPTV HCS+AT+IGL
Sbjct: 39 EVYDLIRTIRDPEKPNTLEELEVVTESCVEVQEINEDDYLVIIKFTPTVPHCSLATLIGL 98
Query: 97 CLRVKLMRSLPPRFKV 112
CLRVKL R LP + K+
Sbjct: 99 CLRVKLQRCLPFKHKL 114
>sp|Q3T0U7|FA96A_BOVIN MIP18 family protein FAM96A OS=Bos taurus GN=FAM96A PE=2 SV=1
Length = 160
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 57/76 (75%), Gaps = 3/76 (3%)
Query: 40 EVFDHVRDIKDPEHPYSLEELKVITEDAIEVD--DERSY-VRVTFTPTVEHCSMATVIGL 96
EV+D +R I+DPE P +LEEL+V+TE +EV +E Y V + FTPTV HCS+AT+IGL
Sbjct: 39 EVYDLIRTIRDPEKPNTLEELEVVTESCVEVQEINEDDYLVIIRFTPTVPHCSLATLIGL 98
Query: 97 CLRVKLMRSLPPRFKV 112
CLRVKL R LP + K+
Sbjct: 99 CLRVKLQRCLPFKHKL 114
>sp|Q9V968|U195B_DROME MIP18 family protein CG30152 OS=Drosophila melanogaster GN=CG30152
PE=1 SV=1
Length = 218
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 53/79 (67%), Gaps = 4/79 (5%)
Query: 38 QQEVFDHVRDIKDPEHPYSLEELKVITEDAIEV----DDERSYVRVTFTPTVEHCSMATV 93
Q+ ++D +R I+DPE P +LE+L V+ ED I V S VR+ F PTV HCS+AT+
Sbjct: 94 QETIYDLLRGIRDPEKPCTLEDLNVVYEDGIFVMPPTRSNVSVVRIEFNPTVPHCSLATL 153
Query: 94 IGLCLRVKLMRSLPPRFKV 112
IGLC+RVK+ R LP K+
Sbjct: 154 IGLCIRVKVERGLPHNIKL 172
>sp|Q9GPR0|FA96A_DICDI MIP18 family protein FAM96A OS=Dictyostelium discoideum GN=fam96A
PE=3 SV=1
Length = 150
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 52/96 (54%), Gaps = 19/96 (19%)
Query: 36 IDQQEVFDHVRDIKDPEHPYSLEELKVITEDAIEVDDER-------------------SY 76
ID+ +VFD +R IKDPE P +LEELKV+ ED I V D +
Sbjct: 8 IDKIDVFDIIRHIKDPEFPKTLEELKVVNEDWITVIDNNDINDSDDINNNNNENYKGYCF 67
Query: 77 VRVTFTPTVEHCSMATVIGLCLRVKLMRSLPPRFKV 112
+++ F PTV HC +A I LC+R K+ LP R K+
Sbjct: 68 IKILFQPTVPHCHLAPTIALCIREKIKEYLPKRSKI 103
>sp|A6QC95|ACCA_SULNB Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Sulfurovum sp. (strain NBC37-1) GN=accA PE=3 SV=1
Length = 312
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 20/26 (76%)
Query: 51 PEHPYSLEELKVITEDAIEVDDERSY 76
P+ PYSL+ +K++ +DA E+ +R++
Sbjct: 60 PDRPYSLDYIKLLMDDAYEIHGDRAF 85
>sp|B3MK91|EFGM_DROAN Elongation factor G, mitochondrial OS=Drosophila ananassae GN=ico
PE=3 SV=1
Length = 745
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Query: 38 QQEVFDHVRDIKDPEHPYSLEELKVITEDAIEVDDERSYVRVTFTPTVEHCSMATVIGLC 97
+QE+ +H+ + D LEE K TED I+ R+ ++ TFTP ++G
Sbjct: 246 RQELIEHLSNADDTFGELFLEE-KPFTEDDIKAALRRTCIKRTFTP--------VLVGTA 296
Query: 98 LRVKLMRSL 106
L+ K ++ L
Sbjct: 297 LKNKGVQPL 305
>sp|B5YIK7|ACCA_THEYD Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303
/ DSM 11347 / YP87) GN=accA PE=3 SV=1
Length = 328
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 51 PEHPYSLEELKVITEDAIEVDDERSY 76
PE PY+L+ + +I ED IE+ +R +
Sbjct: 66 PERPYTLDYISIIFEDFIELHGDRRF 91
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,042,333
Number of Sequences: 539616
Number of extensions: 1544581
Number of successful extensions: 4985
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 4948
Number of HSP's gapped (non-prelim): 35
length of query: 115
length of database: 191,569,459
effective HSP length: 83
effective length of query: 32
effective length of database: 146,781,331
effective search space: 4697002592
effective search space used: 4697002592
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)