BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033615
(115 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q38840|AGL17_ARATH Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana
GN=AGL17 PE=2 SV=2
Length = 227
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 85/113 (75%), Gaps = 5/113 (4%)
Query: 2 GEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKLN 61
G +L GLSVK+LQN+E+QLEM+LRG+R+K+EQILT+EI+EL RK +L+ ENLEL++K+
Sbjct: 112 GVELNGLSVKELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHENLELSRKVQ 171
Query: 62 LIRQENIELYRKAYSTKDENEEGGNASIPYALNNEEEDSHVPIHLQLSQPDQN 114
I QEN+ELY+KAY T + N G + L + +SH + LQLSQP+Q+
Sbjct: 172 RIHQENVELYKKAYGTSNTNGLG-----HHELVDAVYESHAQVRLQLSQPEQS 219
>sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica
GN=MADS27 PE=2 SV=2
Length = 240
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 80/109 (73%), Gaps = 1/109 (0%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
MGE L GL+VK+LQ+LENQLE++LR VR KK+ +L DEI ELNRKG L+ EN+EL KK+
Sbjct: 111 MGEDLSGLNVKELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKKI 170
Query: 61 NLIRQENIELYRKAYSTKDENEEGGNASIPYALNNEEEDSHVPIHLQLS 109
+LIRQEN ELY+K Y T+ +E ++ PY E+ ++VP+ L LS
Sbjct: 171 SLIRQENAELYKKIYETEGPSEVNRDSPTPYNFAVIEK-TNVPVQLGLS 218
>sp|Q9SZJ6|AGL21_ARATH Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana
GN=AGL21 PE=1 SV=1
Length = 228
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 81/114 (71%), Gaps = 6/114 (5%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
MGEQL GLSV +L +LENQ+E++LRG+R++KEQ+LT EIQEL++K +LI ENL+L++K+
Sbjct: 111 MGEQLNGLSVNELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKV 170
Query: 61 NLIRQENIELYRKAYSTKDENEEGGNASIPYALNNEEEDSHVPIHLQLSQPDQN 114
I QEN+ELY+KAY N + +++SH I LQLSQP+ +
Sbjct: 171 QRIHQENVELYKKAYMA------NTNGFTHREVAVADDESHTQIRLQLSQPEHS 218
>sp|A2RVQ5|AGL16_ARATH Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana
GN=AGL16 PE=1 SV=1
Length = 240
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 82/111 (73%), Gaps = 1/111 (0%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
MGE+L GLSV+ LQNLENQLE++LRGVR+KK+Q+L +EIQ LNR+G+L+ ENL+L+KK+
Sbjct: 111 MGEELSGLSVEALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKKV 170
Query: 61 NLIRQENIELYRKAYSTKDENEEGGNASIPYALNNEEEDSHVPIHLQLSQP 111
NL+ Q+N+EL+ K + N+ + L + + S+ +HLQLSQP
Sbjct: 171 NLMHQQNMELHEKVSEVEGVKIANKNSLLTNGL-DMRDTSNEHVHLQLSQP 220
>sp|Q6Z6W2|MAD57_ORYSJ MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica
GN=MADS57 PE=2 SV=2
Length = 241
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 78/115 (67%), Gaps = 3/115 (2%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
MGE+L GL V+DLQ LEN+LE++LR +R++K+ +L EI+EL+ KG LI EN+EL++ L
Sbjct: 110 MGEELSGLGVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQENIELSRSL 169
Query: 61 NLIRQENIELYRKAYSTKDENEEGGN--ASIPYALNNEEEDSHVPIHLQLSQPDQ 113
N++ Q+ +ELY K + + N +S PY+ +++++P L+LSQ Q
Sbjct: 170 NVMSQQKLELYNKLQACEQRGATDANESSSTPYSFRI-IQNANMPPSLELSQSQQ 223
>sp|Q9SI38|ANR1_ARATH MADS-box transcription factor ANR1 OS=Arabidopsis thaliana GN=ANR1
PE=1 SV=1
Length = 234
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 77/110 (70%), Gaps = 4/110 (3%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE+L G++ DLQNLE+QL +L+GVRLKK+Q++T+EI+ELNRKG +IQ EN EL +
Sbjct: 112 VGEELSGMNANDLQNLEDQLVTSLKGVRLKKDQLMTNEIRELNRKGQIIQKENHELQNIV 171
Query: 61 NLIRQENIELYRKAYSTKDENEEGGNASIPYALNNEEEDSHVPIHLQLSQ 110
+++R+ENI+L +K + + E GN+S+ N ++ P LQL Q
Sbjct: 172 DIMRKENIKLQKKVHGRTNAIE--GNSSVDPISNG--TTTYAPPQLQLIQ 217
>sp|Q84NC5|MAD25_ORYSJ MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica
GN=MADS25 PE=2 SV=2
Length = 227
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 75/120 (62%), Gaps = 15/120 (12%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE++ +V+DLQ L+NQ+EM+L +R KK+Q+L +EI +LN KG L+Q EN EL KK
Sbjct: 111 LGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSELRKKF 170
Query: 61 NLIRQENIELYRK---AYSTKDE-----NEEGGNASIPYALNNEEEDSHVPIHLQLSQPD 112
N+ Q NIEL++K ST E +++ G +S P DS V I L+LSQ +
Sbjct: 171 NIAHQRNIELHKKLNSGESTSSEQVTRSSKDPGESSTP-------RDSRVCIDLELSQKE 223
>sp|Q6VAM4|MAD23_ORYSJ MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica
GN=MADS23 PE=2 SV=1
Length = 159
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 40/45 (88%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRK 45
+G+QL GL V+DLQNLE++LEM+L+ +RL+K+ ++ D+IQEL+RK
Sbjct: 111 LGQQLSGLDVEDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRK 155
>sp|Q8GTF5|AP1A_BRAOB Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
botrytis GN=AP1A PE=2 SV=1
Length = 256
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L +S K+LQNLE QL+ L+ +R +K Q++ D I EL RK IQ +N L+K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDSINELQRKEKAIQEQNSMLSKQI 172
>sp|B4YPW6|AP1A_BRAOA Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
alboglabra GN=AP1A PE=3 SV=1
Length = 256
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L +S K+LQNLE QL+ L+ +R +K Q++ D I EL RK IQ +N L+K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDSINELQRKEKAIQEQNSMLSKQI 172
>sp|Q96356|2AP1_BRAOT Floral homeotic protein APETALA 1-2 OS=Brassica oleracea var.
italica GN=2AP1 PE=2 SV=1
Length = 256
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L +S K+LQNLE QL+ L+ +R +K Q++ D I EL RK IQ +N L+K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDSINELQRKEKAIQEQNSMLSKQI 172
>sp|Q41276|AP1_SINAL Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1
Length = 254
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L +S K+LQNLE QL+ L+ +R +K Q++ D I EL RK IQ +N L+K++
Sbjct: 113 LGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSMLSKQI 172
>sp|P0DI14|AP1_BRARP Floral homeotic protein APETALA 1 OS=Brassica rapa subsp.
pekinensis GN=AP1 PE=3 SV=1
Length = 256
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L +S K+LQNLE QL+ L+ +R +K Q++ D + EL RK IQ +N L+K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQI 172
>sp|Q8GTF4|AP1C_BRAOB Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
botrytis GN=AP1C PE=2 SV=1
Length = 256
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L +S K+LQNLE QL+ L+ +R +K Q++ D + EL RK IQ +N L+K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQI 172
>sp|B4YPV4|AP1C_BRAOA Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
alboglabra GN=AP1C PE=3 SV=1
Length = 256
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L +S K+LQNLE QL+ L+ +R +K Q++ D + EL RK IQ +N L+K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQI 172
>sp|Q96355|1AP1_BRAOT Floral homeotic protein APETALA 1-1 OS=Brassica oleracea var.
italica GN=1AP1 PE=2 SV=1
Length = 256
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L +S K+LQNLE QL+ L+ +R +K Q++ D + EL RK IQ +N L+K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQI 172
>sp|Q39081|CAL_ARATH Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL
PE=1 SV=3
Length = 255
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE+L +S+KDLQNLE QLE L+ +R +K Q++ + + L RK IQ EN L K++
Sbjct: 115 LGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQI 174
>sp|D7KWY6|AP1_ARALL Floral homeotic protein APETALA 1 OS=Arabidopsis lyrata subsp.
lyrata GN=AP1 PE=3 SV=1
Length = 256
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L +S K+LQNLE QL+ L+ +R +K Q++ + I EL RK IQ +N L+K++
Sbjct: 113 LGEDLNAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQRKEKAIQEQNSMLSKQI 172
>sp|Q39371|3AP1_BRAOL Floral homeotic protein APETALA 1 OS=Brassica oleracea GN=AP1 PE=2
SV=1
Length = 256
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L +S K+LQNLE QL+ L+ +R +K Q++ + I EL RK IQ +N L+K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYESINELQRKEKAIQEQNSMLSKQI 172
>sp|D7KQR8|CAL_ARALL Transcription factor CAULIFLOWER OS=Arabidopsis lyrata subsp.
lyrata GN=CAL PE=3 SV=1
Length = 256
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L +S+KDLQNLE QLE L+ +R +K Q++ + + L RK + IQ EN L K++
Sbjct: 115 LGEDLEPMSLKDLQNLEQQLETALKHIRSRKNQLMYESLNHLQRKENEIQEENSMLTKQI 174
>sp|Q10PZ9|MADS1_ORYSJ MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica
GN=MADS1 PE=1 SV=1
Length = 257
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L LS+K+L+ LENQ+E++L+ +R +K Q L D++ +L K +Q N +L KKL
Sbjct: 110 LGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKL 169
Query: 61 NLIRQENI 68
EN+
Sbjct: 170 QETSAENV 177
>sp|A2XDY1|MADS1_ORYSI MADS-box transcription factor 1 OS=Oryza sativa subsp. indica
GN=MADS1 PE=2 SV=2
Length = 257
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L LS+K+L+ LENQ+E++L+ +R +K Q L D++ +L K +Q N +L KKL
Sbjct: 110 LGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKL 169
Query: 61 NLIRQENI 68
EN+
Sbjct: 170 QETSAENV 177
>sp|P35631|AP1_ARATH Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1
PE=1 SV=2
Length = 256
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L +S K+LQNLE QL+ L+ +R +K Q++ + I EL +K IQ +N L+K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQI 172
>sp|Q0DEB8|MADS5_ORYSJ MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica
GN=MADS5 PE=1 SV=1
Length = 225
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L LS+K+L+ LENQ+E++L +R K Q L D++ EL RK +Q N +L +K+
Sbjct: 114 LGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRKI 173
Query: 61 NLIRQENI 68
EN+
Sbjct: 174 QETSGENM 181
>sp|A2Y9P0|MADS5_ORYSI MADS-box transcription factor 5 OS=Oryza sativa subsp. indica
GN=MADS5 PE=2 SV=1
Length = 225
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L LS+K+L+ LENQ+E++L +R K Q L D++ EL RK +Q N +L +K+
Sbjct: 114 LGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRKI 173
Query: 61 NLIRQENI 68
EN+
Sbjct: 174 QETSGENM 181
>sp|Q40170|AGL8_SOLLC Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum
GN=TDR4 PE=2 SV=1
Length = 227
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 42/60 (70%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L LS+K+LQNLE+QL+ L+ +R +K Q++ + I L +K +Q +N +L+KK+
Sbjct: 113 VGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKKDRALQEQNNQLSKKV 172
>sp|Q6Q9H6|MAD34_ORYSJ MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica
GN=MADS34 PE=2 SV=2
Length = 239
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L L+ +L+ LE+Q+ TL+ +R +K Q+L DE+ +L RK ++Q N L +KL
Sbjct: 113 LGEDLAPLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKL 172
Query: 61 NLI 63
+ I
Sbjct: 173 DEI 175
>sp|Q0D4T4|MAD18_ORYSJ MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica
GN=MADS18 PE=1 SV=1
Length = 249
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRK 45
+GEQL L++K+LQ LE+QLE +L+ +R KK Q+L + I EL +K
Sbjct: 113 LGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKK 157
>sp|A2YNI2|MAD18_ORYSI MADS-box transcription factor 18 OS=Oryza sativa subsp. indica
GN=MADS18 PE=2 SV=2
Length = 249
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRK 45
+GEQL L++K+LQ LE+QLE +L+ +R KK Q+L + I EL +K
Sbjct: 113 LGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKK 157
>sp|A2IB53|AP1_CITSI Floral homeotic protein APETALA 1 OS=Citrus sinensis GN=AP1 PE=2
SV=1
Length = 256
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L +S K+LQNLE QL+ L+ +R +K Q++ + I EL +K IQ +N L K++
Sbjct: 113 LGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLFKQI 172
>sp|O65874|MTF1_PEA MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1
Length = 247
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
MGE L LS KDL+ LE QL+ +L+ +R + Q + D++ +L RK HL+ N L +++
Sbjct: 116 MGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQRM 175
>sp|Q03489|AGL9_PETHY Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida
GN=FBP2 PE=1 SV=2
Length = 241
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 41/60 (68%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L L+ K+L++LE QL+M+L+ +R + Q++ D++Q+L RK H + N L ++L
Sbjct: 114 LGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQRL 173
>sp|Q9XJ66|MAD22_ORYSJ MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica
GN=MADS22 PE=2 SV=1
Length = 228
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 2 GEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKLN 61
GE+L GLS+ +LQ LE LE L V L K+Q ++I EL RK + EN++L +++
Sbjct: 112 GEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVS 171
Query: 62 LI 63
I
Sbjct: 172 QI 173
>sp|Q38837|AGL13_ARATH Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana
GN=AGL13 PE=2 SV=2
Length = 244
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRK 45
+GE L G+S+K+LQ LE QLE L R +K Q++ ++++EL RK
Sbjct: 110 VGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRK 154
>sp|Q41274|AGL8_SINAL Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8
PE=2 SV=1
Length = 241
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
MGE L LS+K+LQ+LE+QL ++ +R +K Q + + I L +K ++Q N L KK+
Sbjct: 113 MGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISALQKKDKVLQDHNNALLKKI 172
>sp|Q38876|AGL8_ARATH Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8
PE=1 SV=1
Length = 242
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
MGE L LS+K+LQ+LE+QL+ ++ +R +K Q + + I L +K +Q N L KK+
Sbjct: 113 MGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKI 172
>sp|Q6EU39|MADS6_ORYSJ MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica
GN=MADS6 PE=1 SV=1
Length = 250
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L LSVK+LQ LE QLE L R +K Q++ ++++EL RK + N +L KL
Sbjct: 111 LGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKL 170
Query: 61 NL 62
+
Sbjct: 171 EV 172
>sp|Q9SBK9|CAL_BRARP Transcription factor CAULIFLOWER OS=Brassica rapa subsp. pekinensis
GN=CAL PE=2 SV=1
Length = 254
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L +S+K+LQNLE QL+ +L+ +R +K Q++ + + L RK I EN L K++
Sbjct: 115 LGEDLESISIKELQNLEQQLDTSLKHIRSRKNQLMHESLNHLQRKEKEILEENSMLTKQI 174
>sp|Q6R4S6|CAL_BRARC Transcription factor CAULIFLOWER OS=Brassica rapa subsp. chinensis
GN=CAL PE=2 SV=1
Length = 254
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L +S+K+LQNLE QL+ +L+ +R +K Q++ + + L RK I EN L K++
Sbjct: 115 LGEDLESISIKELQNLEQQLDTSLKHIRSRKNQLMHESLNHLQRKEKEILEENSMLTKQI 174
>sp|Q6R4S3|CAL_BRARA Transcription factor CAULIFLOWER OS=Brassica rapa GN=CAL PE=2 SV=1
Length = 254
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L +S+K+LQNLE QL+ +L+ +R +K Q++ + + L RK I EN L K++
Sbjct: 115 LGEDLESISIKELQNLEQQLDTSLKHIRSRKNQLMHESLNHLQRKEKEILEENSMLTKQI 174
>sp|Q69TG5|MAD55_ORYSJ MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica
GN=MADS55 PE=2 SV=2
Length = 245
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 2 GEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
GE+L GLSV++LQ +E LE L+ V K+Q EI EL RKG + EN+ L ++
Sbjct: 135 GEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKGIQLAEENMRLRDQM 193
>sp|Q42429|AGL8_SOLTU Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum
PE=2 SV=1
Length = 250
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 42/60 (70%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L L++K+LQNLE+QL+ L+ +R +K Q++ + I L ++ +Q +N +L+KK+
Sbjct: 113 VGEDLESLNMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKV 172
>sp|Q0J466|MADS7_ORYSJ MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica
GN=MADS7 PE=1 SV=2
Length = 249
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L L +K+L++LE QL+ +L+ VR + + L D++ EL RK ++ N L +KL
Sbjct: 115 LGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKL 174
>sp|P0C5B0|MADS7_ORYSI MADS-box transcription factor 7 OS=Oryza sativa subsp. indica
GN=MADS7 PE=2 SV=2
Length = 249
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L L +K+L++LE QL+ +L+ VR + + L D++ EL RK ++ N L +KL
Sbjct: 115 LGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKL 174
>sp|Q39375|CAL_BRAOT Transcription factor CAULIFLOWER OS=Brassica oleracea var. italica
GN=CAL PE=2 SV=1
Length = 251
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L +S+K+LQNLE QL+ +L+ +R +K Q++ + + L RK I EN L K++
Sbjct: 115 LGEDLESISIKELQNLEQQLDTSLKHIRSRKNQLMHESLNHLQRKEKEILEENSMLAKQI 174
>sp|O22328|AGL8_SOLCO Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii
GN=SCM1 PE=2 SV=1
Length = 250
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 41/60 (68%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L L++K+LQNLE+QL L+ +R +K Q++ + I L ++ +Q +N +L+KK+
Sbjct: 113 VGEDLESLNMKELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKV 172
>sp|Q6H711|MAD29_ORYSJ MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica
GN=MADS29 PE=2 SV=1
Length = 260
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 2 GEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKLN 61
G+ L L++ D+ +LE QLE ++ VR +K Q+L ++ L RK H+++ +N L + +N
Sbjct: 111 GDDLSNLTLADINDLEQQLEFSVTKVRARKHQLLNQQLDNLRRKEHILEDQNSFLCRMIN 170
>sp|Q7XUN2|MAD17_ORYSJ MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica
GN=MADS17 PE=1 SV=2
Length = 249
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L LS+K+LQ LE QLE +L R +K QI+ +++ +L RK + ELNK+L
Sbjct: 113 LGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLG----ELNKQL 168
>sp|O64645|SOC1_ARATH MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1
Length = 214
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 40/60 (66%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE + S+++LQ +E QLE +++ +R +K Q+ ++I++L +K + EN +L++K
Sbjct: 112 LGEGIGTCSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEKW 171
>sp|Q39685|CMB1_DIACA MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1
Length = 233
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 1 MGEQLYGLSVKDLQNLENQLEMTLRGVRLKKEQILTDEIQELNRKGHLIQLENLELNKKL 60
+GE L LS K+L+ LE+QL+ +LR +R K Q + D++ +L +K ++ E N+ L
Sbjct: 112 LGEDLGELSTKELEQLEHQLDKSLRQIRSIKTQHMLDQLADLQKKEEML----FESNRAL 167
Query: 61 NLIRQENIELYRKAYSTKDENEEGGNASIPYALNN 95
+E+ +R + + +G +P NN
Sbjct: 168 KTKLEESCASFRPNWDVRQPG-DGFFEPLPLPCNN 201
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.131 0.347
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,775,624
Number of Sequences: 539616
Number of extensions: 1598511
Number of successful extensions: 6068
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 97
Number of HSP's that attempted gapping in prelim test: 5868
Number of HSP's gapped (non-prelim): 292
length of query: 115
length of database: 191,569,459
effective HSP length: 83
effective length of query: 32
effective length of database: 146,781,331
effective search space: 4697002592
effective search space used: 4697002592
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 55 (25.8 bits)