Query 033623
Match_columns 115
No_of_seqs 272 out of 1447
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 06:49:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033623.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033623hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.6 9.6E-15 3.3E-19 80.2 6.6 58 1-59 10-67 (68)
2 1cc8_A Protein (metallochapero 99.5 1.5E-13 5.2E-18 76.1 7.5 58 1-58 13-71 (73)
3 4a4j_A Pacszia, cation-transpo 99.5 3.3E-13 1.1E-17 73.8 7.6 57 1-57 11-69 (69)
4 3dxs_X Copper-transporting ATP 99.4 4E-13 1.4E-17 74.4 7.3 58 1-58 11-71 (74)
5 2crl_A Copper chaperone for su 99.4 7.7E-13 2.6E-17 77.7 7.5 61 1-61 27-87 (98)
6 3fry_A Probable copper-exporti 99.4 6.4E-13 2.2E-17 73.7 5.9 56 1-58 14-69 (73)
7 2xmm_A SSR2857 protein, ATX1; 99.3 4E-12 1.4E-16 67.7 6.6 54 1-54 10-63 (64)
8 2roe_A Heavy metal binding pro 99.3 3.1E-12 1E-16 69.1 6.1 57 1-57 9-65 (66)
9 2k2p_A Uncharacterized protein 99.3 8.4E-12 2.9E-16 71.3 6.5 54 1-54 31-84 (85)
10 1osd_A MERP, hypothetical prot 99.3 3.4E-11 1.2E-15 65.6 8.3 57 1-57 12-71 (72)
11 2kt2_A Mercuric reductase; nme 99.3 1.9E-11 6.5E-16 66.2 7.2 57 1-57 9-67 (69)
12 1aw0_A Menkes copper-transport 99.3 2.9E-11 9.9E-16 65.8 7.4 57 1-57 12-71 (72)
13 1cpz_A Protein (COPZ); copper 99.3 3.2E-11 1.1E-15 64.9 7.4 56 1-56 9-67 (68)
14 2xmw_A PACS-N, cation-transpor 99.3 3.7E-11 1.2E-15 65.2 7.7 56 1-56 12-69 (71)
15 3cjk_B Copper-transporting ATP 99.3 4.8E-11 1.6E-15 65.7 8.0 58 1-58 11-71 (75)
16 1q8l_A Copper-transporting ATP 99.3 2.3E-11 7.7E-16 68.9 6.7 60 1-60 18-80 (84)
17 2l3m_A Copper-ION-binding prot 99.2 5.5E-11 1.9E-15 64.6 7.9 54 1-54 14-70 (71)
18 2g9o_A Copper-transporting ATP 99.2 4.1E-11 1.4E-15 68.9 7.3 59 1-59 12-76 (90)
19 1yg0_A COP associated protein; 99.2 6.3E-11 2.2E-15 63.3 7.5 54 1-54 10-65 (66)
20 1qup_A Superoxide dismutase 1 99.2 5.4E-11 1.8E-15 79.3 8.5 62 1-62 14-75 (222)
21 1kvi_A Copper-transporting ATP 99.2 4.7E-11 1.6E-15 66.4 6.4 58 1-58 17-77 (79)
22 1fvq_A Copper-transporting ATP 99.2 6.5E-11 2.2E-15 64.4 6.7 58 1-58 11-70 (72)
23 2kyz_A Heavy metal binding pro 99.2 3.4E-11 1.1E-15 65.2 5.3 55 1-57 10-64 (67)
24 1mwy_A ZNTA; open-faced beta-s 99.2 1.2E-10 4.2E-15 63.8 7.6 57 1-57 12-69 (73)
25 2qif_A Copper chaperone COPZ; 99.2 1.8E-10 6.1E-15 61.6 7.8 54 1-54 11-67 (69)
26 1opz_A Potential copper-transp 99.2 1.8E-10 6.1E-15 63.1 7.3 57 1-57 15-74 (76)
27 2ew9_A Copper-transporting ATP 99.1 1.6E-10 5.3E-15 71.5 7.4 57 1-57 89-148 (149)
28 1yjr_A Copper-transporting ATP 99.1 1.2E-10 4.3E-15 63.7 6.2 57 1-57 13-72 (75)
29 1y3j_A Copper-transporting ATP 99.1 7.2E-11 2.5E-15 65.4 5.0 58 1-58 12-72 (77)
30 1jk9_B CCS, copper chaperone f 99.1 1.7E-10 5.6E-15 78.1 7.4 62 1-62 15-76 (249)
31 1p6t_A Potential copper-transp 99.1 2.4E-10 8.3E-15 70.9 7.1 59 1-59 83-144 (151)
32 2kkh_A Putative heavy metal tr 99.1 5.7E-10 2E-14 64.5 8.0 61 1-61 25-88 (95)
33 1jww_A Potential copper-transp 99.1 2.8E-10 9.5E-15 63.1 6.2 58 1-58 12-72 (80)
34 2ldi_A Zinc-transporting ATPas 99.1 1.8E-10 6.2E-15 62.1 5.2 55 1-55 12-69 (71)
35 2ofg_X Zinc-transporting ATPas 99.1 4.7E-10 1.6E-14 66.9 7.4 57 1-57 17-76 (111)
36 2rop_A Copper-transporting ATP 99.0 1.4E-09 4.9E-14 70.9 7.7 59 1-59 131-192 (202)
37 2aj0_A Probable cadmium-transp 99.0 8.3E-10 2.8E-14 60.1 5.3 54 1-58 12-65 (71)
38 2ew9_A Copper-transporting ATP 98.8 1.3E-08 4.6E-13 62.7 7.0 58 1-58 13-73 (149)
39 3j09_A COPA, copper-exporting 98.7 7.5E-08 2.6E-12 73.6 7.8 58 1-58 11-71 (723)
40 1p6t_A Potential copper-transp 98.6 1.9E-07 6.4E-12 57.7 6.8 54 1-54 15-71 (151)
41 2rop_A Copper-transporting ATP 98.5 1.9E-07 6.6E-12 60.7 5.4 50 1-50 29-81 (202)
42 3bpd_A Uncharacterized protein 93.7 0.17 5.7E-06 29.1 4.8 50 9-58 23-80 (100)
43 2x3d_A SSO6206; unknown functi 93.2 0.3 1E-05 27.9 5.3 50 9-58 22-79 (96)
44 2raq_A Conserved protein MTH88 92.9 0.26 9E-06 28.2 4.7 50 9-58 23-80 (97)
45 2jsx_A Protein NAPD; TAT, proo 86.5 3 0.0001 23.6 6.7 43 7-49 19-62 (95)
46 4gwb_A Peptide methionine sulf 83.5 3.1 0.00011 26.2 5.3 44 4-47 9-70 (168)
47 1fvg_A Peptide methionine sulf 78.9 3.9 0.00013 26.5 4.6 45 4-48 50-116 (199)
48 3bqh_A PILB, peptide methionin 75.3 5.6 0.00019 25.6 4.6 44 4-47 9-74 (193)
49 2j89_A Methionine sulfoxide re 75.0 5.4 0.00019 26.9 4.6 44 4-47 101-166 (261)
50 1ff3_A Peptide methionine sulf 74.1 6 0.00021 25.8 4.6 45 4-48 49-115 (211)
51 1nwa_A Peptide methionine sulf 72.8 8 0.00027 25.1 4.9 44 4-47 32-93 (203)
52 1uwd_A Hypothetical protein TM 70.2 5.7 0.00019 22.5 3.5 22 7-28 62-83 (103)
53 3cq1_A Putative uncharacterize 70.0 5.9 0.0002 22.4 3.5 22 7-28 61-82 (103)
54 3b1j_C CP12; alpha/beta fold, 64.3 0.95 3.2E-05 19.4 -0.5 14 101-114 7-22 (26)
55 3e0m_A Peptide methionine sulf 63.6 12 0.0004 26.0 4.5 44 4-47 9-72 (313)
56 3hz7_A Uncharacterized protein 59.8 19 0.00065 19.7 4.2 49 1-58 9-60 (87)
57 3lno_A Putative uncharacterize 57.2 9.1 0.00031 21.9 2.7 23 7-29 64-87 (108)
58 2k1h_A Uncharacterized protein 56.1 22 0.00076 20.0 4.1 38 10-49 41-80 (94)
59 3v4k_A DNA DC->DU-editing enzy 54.9 13 0.00045 24.1 3.3 57 2-62 110-166 (203)
60 2nyt_A Probable C->U-editing e 48.3 12 0.0004 24.0 2.3 53 2-59 93-147 (190)
61 2fi0_A Conserved domain protei 47.3 14 0.00047 20.0 2.2 18 38-55 61-78 (81)
62 3pim_A Peptide methionine sulf 44.0 12 0.00043 23.9 1.9 27 4-30 26-54 (187)
63 3qv1_G CP12 protein; rossman f 43.3 3.7 0.00012 22.7 -0.5 16 99-114 62-79 (82)
64 1jdq_A TM006 protein, hypothet 43.2 43 0.0015 18.7 5.7 49 1-58 34-84 (98)
65 2w7v_A General secretion pathw 41.0 48 0.0016 18.6 4.9 49 9-58 16-70 (95)
66 3lvj_C Sulfurtransferase TUSA; 40.5 43 0.0015 17.9 5.6 49 1-58 18-68 (82)
67 3pro_C Alpha-lytic protease; P 38.9 70 0.0024 19.9 6.5 36 18-53 114-150 (166)
68 1gh8_A Translation elongation 38.6 28 0.00096 19.4 2.6 20 7-26 64-83 (89)
69 1pav_A Hypothetical protein TA 36.5 40 0.0014 17.7 3.1 47 1-56 14-62 (78)
70 2lj9_A CP12 domain-containing 35.9 5.5 0.00019 22.8 -0.6 16 99-114 79-96 (99)
71 2v50_A Multidrug resistance pr 34.4 82 0.0028 25.3 5.6 43 8-50 160-210 (1052)
72 2yy3_A Elongation factor 1-bet 34.3 27 0.00093 19.5 2.1 20 7-26 67-86 (91)
73 4eqa_C PA1845 protein, putativ 33.2 9.5 0.00032 22.2 0.1 14 97-110 24-37 (153)
74 2hiy_A Hypothetical protein; C 32.0 96 0.0033 19.4 5.5 46 10-56 27-77 (183)
75 2y9j_Y Lipoprotein PRGK, prote 31.5 42 0.0014 20.9 2.9 21 7-27 90-110 (170)
76 1je3_A EC005, hypothetical 8.6 31.4 56 0.0019 18.3 3.2 47 2-57 36-84 (97)
77 1pqx_A Conserved hypothetical 30.8 23 0.00078 19.8 1.4 37 11-49 42-80 (91)
78 4dx5_A Acriflavine resistance 30.6 1.1E+02 0.0037 24.5 5.7 43 8-50 160-210 (1057)
79 1yj7_A ESCJ; mixed alpha/beta, 30.5 45 0.0015 20.8 2.9 22 7-28 92-113 (171)
80 3gzb_A Putative snoal-like pol 29.6 58 0.002 19.7 3.1 32 16-47 119-151 (154)
81 3vow_A Probable DNA DC->DU-edi 28.6 33 0.0011 21.9 2.1 51 2-62 96-153 (190)
82 4g1a_A AQ-C16C19 peptide; heli 28.3 18 0.0006 15.6 0.5 10 3-12 16-25 (32)
83 2kgs_A Uncharacterized protein 28.0 27 0.00094 20.7 1.5 16 22-37 78-93 (132)
84 3vpj_E TSE1-specific immunity 27.1 14 0.00046 22.3 0.0 14 97-110 63-76 (192)
85 1b64_A Elongation factor 1-bet 25.0 62 0.0021 18.0 2.6 21 7-27 66-87 (91)
86 1kaf_A Transcription regulator 25.0 1.1E+02 0.0036 17.7 4.2 40 18-58 44-83 (108)
87 4e6k_G BFD, bacterioferritin-a 24.7 33 0.0011 18.2 1.3 16 1-16 36-51 (73)
88 2cuy_A Malonyl COA-[acyl carri 24.2 1.7E+02 0.0057 19.7 6.2 52 7-59 137-189 (305)
89 3fpn_B Geobacillus stearotherm 24.2 66 0.0023 18.2 2.7 26 29-54 12-39 (106)
90 1jg5_A GTP cyclohydrolase I fe 23.6 72 0.0025 17.4 2.5 26 33-58 45-70 (83)
91 1q2j_A MU-conotoxin SMIIIA; HE 21.6 27 0.00092 14.6 0.4 6 108-113 6-11 (26)
92 2zzt_A Putative uncharacterize 21.3 74 0.0025 17.8 2.5 17 7-23 12-28 (107)
93 1d1r_A Hypothetical 11.4 KD pr 21.3 45 0.0015 19.5 1.5 37 12-48 24-68 (116)
94 1ytb_A Protein (tata binding p 21.3 1.2E+02 0.0043 19.0 3.7 25 25-49 145-169 (180)
95 2e9h_A EIF-5, eukaryotic trans 21.1 1.6E+02 0.0053 18.2 4.4 28 23-50 72-99 (157)
96 4bby_A Alkyldihydroxyacetoneph 21.1 97 0.0033 23.5 3.7 31 23-53 267-297 (658)
97 3tzy_A Polyketide synthase PKS 20.1 2.6E+02 0.0089 20.4 6.1 51 8-59 282-333 (491)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.56 E-value=9.6e-15 Score=80.16 Aligned_cols=58 Identities=21% Similarity=0.486 Sum_probs=55.4
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHHcCCCceecCC
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGYVDPNKVLKKVKSTGKRAEFWPY 59 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~~~~~ 59 (115)
|+|.+|+.+|+++|.+++|| ++++|+.+++++|.+.+++++|.++|+++||.+.+++.
T Consensus 10 m~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~ 67 (68)
T 3iwl_A 10 MTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGL 67 (68)
T ss_dssp CCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEEC
T ss_pred cCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecCC
Confidence 89999999999999999999 99999999999999989999999999999999998763
No 2
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.49 E-value=1.5e-13 Score=76.08 Aligned_cols=58 Identities=22% Similarity=0.436 Sum_probs=54.8
Q ss_pred CCcHhHHHHHHHHHhCCC-CceEEEEeccCCEEEEEeeCCHHHHHHHHHHcCCCceecC
Q 033623 1 MDCDGCERKVRNAVSSIR-GAKSVEVNRKQSRVTVTGYVDPNKVLKKVKSTGKRAEFWP 58 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~-gv~~~~v~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~~~~ 58 (115)
|+|.+|+.+|+++|.+++ ||.++++|+.+++++|.+..+.++|.+.|+++||.+.++.
T Consensus 13 m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (73)
T 1cc8_A 13 MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGK 71 (73)
T ss_dssp CCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEEEE
T ss_pred eECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCceeee
Confidence 799999999999999999 9999999999999999988899999999999999987764
No 3
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.46 E-value=3.3e-13 Score=73.76 Aligned_cols=57 Identities=25% Similarity=0.458 Sum_probs=53.0
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEe--eCCHHHHHHHHHHcCCCceec
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTG--YVDPNKVLKKVKSTGKRAEFW 57 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~--~~~~~~i~~~i~~~G~~~~~~ 57 (115)
|+|.+|+.+|+++|.+++||.++++|+.+++++|.. ..+.++|.++|+++||.++++
T Consensus 11 m~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~ 69 (69)
T 4a4j_A 11 MDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL 69 (69)
T ss_dssp CCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEEC
T ss_pred eecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEeC
Confidence 899999999999999999999999999999999984 489999999999999988753
No 4
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.45 E-value=4e-13 Score=74.42 Aligned_cols=58 Identities=24% Similarity=0.398 Sum_probs=54.1
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHHcCCCceecC
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFWP 58 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~~~ 58 (115)
|+|.+|+.+|+++|.+++||.++++|+.+++++|..+ ++.++|.++|+++||.++++.
T Consensus 11 m~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (74)
T 3dxs_X 11 MTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILA 71 (74)
T ss_dssp CCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEE
T ss_pred cCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEcc
Confidence 7999999999999999999999999999999999864 689999999999999998765
No 5
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=7.7e-13 Score=77.65 Aligned_cols=61 Identities=25% Similarity=0.414 Sum_probs=57.0
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHHcCCCceecCCCC
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGYVDPNKVLKKVKSTGKRAEFWPYVP 61 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~~~~~~~ 61 (115)
|+|.+|+.+|+++|.+++||.++++|+.+++++|.+.++.++|.++|+++||.+.++..+.
T Consensus 27 m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~~~~ 87 (98)
T 2crl_A 27 MTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGS 87 (98)
T ss_dssp CCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEESCC
T ss_pred eECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEEccCCC
Confidence 7999999999999999999999999999999999988899999999999999998877543
No 6
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.40 E-value=6.4e-13 Score=73.67 Aligned_cols=56 Identities=27% Similarity=0.470 Sum_probs=53.5
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHHcCCCceecC
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGYVDPNKVLKKVKSTGKRAEFWP 58 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~~~~ 58 (115)
|+|.+|+.+|+++|.+ +||..+++|+.+++++|.++ +.++|.++|+++||.+.+.+
T Consensus 14 m~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~~~~~ 69 (73)
T 3fry_A 14 LSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQAKLRS 69 (73)
T ss_dssp SBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEEEECC
T ss_pred CCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCceEecC
Confidence 7999999999999999 99999999999999999988 99999999999999998876
No 7
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=99.34 E-value=4e-12 Score=67.72 Aligned_cols=54 Identities=22% Similarity=0.449 Sum_probs=51.0
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHHcCCCc
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGYVDPNKVLKKVKSTGKRA 54 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~~~~~~i~~~i~~~G~~~ 54 (115)
|+|.+|+.+|+++|.+++||.++++++.+++++|.+..+.+.|.+.|+++||.+
T Consensus 10 m~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~~~ 63 (64)
T 2xmm_A 10 IACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGYEV 63 (64)
T ss_dssp CCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHHHTTCCC
T ss_pred cCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence 789999999999999999999999999999999987788899999999999975
No 8
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=99.34 E-value=3.1e-12 Score=69.11 Aligned_cols=57 Identities=30% Similarity=0.567 Sum_probs=52.2
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHHcCCCceec
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGYVDPNKVLKKVKSTGKRAEFW 57 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~~~ 57 (115)
|+|.+|+.+|+++|.+++||.++++|+.+++++|.+..+.+.|.+.|+++||.+..+
T Consensus 9 m~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~ 65 (66)
T 2roe_A 9 MTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEVL 65 (66)
T ss_dssp CCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTCEEEEC
T ss_pred eEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCCCcEec
Confidence 799999999999999999999999999999999965588999999999999987643
No 9
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=99.29 E-value=8.4e-12 Score=71.32 Aligned_cols=54 Identities=19% Similarity=0.390 Sum_probs=51.4
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHHcCCCc
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGYVDPNKVLKKVKSTGKRA 54 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~~~~~~i~~~i~~~G~~~ 54 (115)
|+|.+|+.+|+++|.+++||.++++|+.+++++|...++.++|.++|+++||.+
T Consensus 31 m~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~Gy~~ 84 (85)
T 2k2p_A 31 MTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTP 84 (85)
T ss_dssp CCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHHHTTCCC
T ss_pred CCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence 789999999999999999999999999999999998888999999999999975
No 10
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.28 E-value=3.4e-11 Score=65.56 Aligned_cols=57 Identities=25% Similarity=0.387 Sum_probs=51.8
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHHcCCCceec
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFW 57 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~~ 57 (115)
|+|.+|+.+|+++|.+++||.++++++..++++|..+ .+.+.|.+.|+++||.+.+.
T Consensus 12 m~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 71 (72)
T 1osd_A 12 MTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK 71 (72)
T ss_dssp CCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred eEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEec
Confidence 7899999999999999999999999999999999754 57889999999999987653
No 11
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.28 E-value=1.9e-11 Score=66.19 Aligned_cols=57 Identities=23% Similarity=0.433 Sum_probs=51.8
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee--CCHHHHHHHHHHcCCCceec
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY--VDPNKVLKKVKSTGKRAEFW 57 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~--~~~~~i~~~i~~~G~~~~~~ 57 (115)
|+|.+|+.+|+++|.+++||.++++++..++++|..+ .+.++|.+.|+++||.+.+.
T Consensus 9 m~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~ 67 (69)
T 2kt2_A 9 MTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKATLA 67 (69)
T ss_dssp SCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEEECC
T ss_pred cccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCceEeC
Confidence 7899999999999999999999999999999998754 57889999999999987654
No 12
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.26 E-value=2.9e-11 Score=65.83 Aligned_cols=57 Identities=25% Similarity=0.396 Sum_probs=51.8
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHHcCCCceec
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFW 57 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~~ 57 (115)
|+|.+|+.+|+++|.+++||.++++++..++++|..+ ++.+.|.+.|+++||.+.+.
T Consensus 12 m~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 71 (72)
T 1aw0_A 12 MTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS 71 (72)
T ss_dssp CCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred eecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEeC
Confidence 7899999999999999999999999999999999864 57889999999999987654
No 13
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=99.26 E-value=3.2e-11 Score=64.88 Aligned_cols=56 Identities=29% Similarity=0.516 Sum_probs=51.3
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHHcCCCcee
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEF 56 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~ 56 (115)
|+|.+|+.+|+++|.+++||.++++++..++++|..+ .+.++|.+.|+++||.+++
T Consensus 9 m~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 67 (68)
T 1cpz_A 9 MSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEV 67 (68)
T ss_dssp CCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred eeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCccc
Confidence 7899999999999999999999999999999999864 5788999999999998765
No 14
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.26 E-value=3.7e-11 Score=65.17 Aligned_cols=56 Identities=23% Similarity=0.443 Sum_probs=50.4
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee--CCHHHHHHHHHHcCCCcee
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY--VDPNKVLKKVKSTGKRAEF 56 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~--~~~~~i~~~i~~~G~~~~~ 56 (115)
|+|.+|+.+|+++|.+++||.++++++..++++|..+ .+.+.|.+.|+++||.+.+
T Consensus 12 m~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~ 69 (71)
T 2xmw_A 12 MRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARV 69 (71)
T ss_dssp CCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEEEE
T ss_pred cccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCcee
Confidence 7899999999999999999999999999999999754 6788899999999998754
No 15
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.25 E-value=4.8e-11 Score=65.66 Aligned_cols=58 Identities=16% Similarity=0.386 Sum_probs=52.6
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHHcCCCceecC
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFWP 58 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~~~ 58 (115)
|+|.+|+.+|+++|.+++||.++++++..++++|..+ .+.+.|.+.|+++||.+.+..
T Consensus 11 m~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (75)
T 3cjk_B 11 MTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 71 (75)
T ss_dssp CCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEEE
T ss_pred ccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEeec
Confidence 7999999999999999999999999999999999854 578899999999999877654
No 16
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.25 E-value=2.3e-11 Score=68.85 Aligned_cols=60 Identities=15% Similarity=0.345 Sum_probs=54.4
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHHcCCCceecCCC
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFWPYV 60 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~~~~~ 60 (115)
|+|.+|+.+|+++|.+++||.++++++..++++|..+ ++.+.|.+.|+++||.+.+....
T Consensus 18 m~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 80 (84)
T 1q8l_A 18 MTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQP 80 (84)
T ss_dssp TTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCCT
T ss_pred cccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecCCc
Confidence 7999999999999999999999999999999999864 57889999999999998877643
No 17
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.24 E-value=5.5e-11 Score=64.60 Aligned_cols=54 Identities=22% Similarity=0.428 Sum_probs=49.6
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHHcCCCc
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRA 54 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~ 54 (115)
|+|.+|+.+|+++|.+++||.++.+++..++++|..+ ++.+.|.+.|+++||.+
T Consensus 14 m~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 70 (71)
T 2l3m_A 14 MSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV 70 (71)
T ss_dssp CCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred ccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 7899999999999999999999999999999999754 67889999999999965
No 18
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.23 E-value=4.1e-11 Score=68.91 Aligned_cols=59 Identities=19% Similarity=0.317 Sum_probs=53.2
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHHc---CCCceecCC
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKST---GKRAEFWPY 59 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~---~~~~~i~~~i~~~---G~~~~~~~~ 59 (115)
|+|.+|+.+|+++|.+++||.++++++.+++++|..+ ++.+.|.++|+++ ||.+.++..
T Consensus 12 m~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~ 76 (90)
T 2g9o_A 12 MHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSE 76 (90)
T ss_dssp CCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCC
T ss_pred cCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCC
Confidence 8999999999999999999999999999999999753 5778899999999 598877764
No 19
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=99.23 E-value=6.3e-11 Score=63.31 Aligned_cols=54 Identities=19% Similarity=0.386 Sum_probs=49.5
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee--CCHHHHHHHHHHcCCCc
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY--VDPNKVLKKVKSTGKRA 54 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~--~~~~~i~~~i~~~G~~~ 54 (115)
|+|.+|+.+|+++|.+++||.++++++.+++++|..+ .+.+.|.+.|+++||.+
T Consensus 10 m~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 10 ITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQEV 65 (66)
T ss_dssp CSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHTCCC
T ss_pred cccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCCc
Confidence 7899999999999999999999999999999999854 57788999999999964
No 20
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.23 E-value=5.4e-11 Score=79.26 Aligned_cols=62 Identities=19% Similarity=0.431 Sum_probs=57.9
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHHcCCCceecCCCCC
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGYVDPNKVLKKVKSTGKRAEFWPYVPY 62 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~~~~~~~~ 62 (115)
|+|.+|+.+|+++|++++||.++++|+.+++++|.+..+.++|.++|+++||.+.++..+..
T Consensus 14 MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~~~~ 75 (222)
T 1qup_A 14 MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKP 75 (222)
T ss_dssp CCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEECCSCT
T ss_pred cccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCccccccCCCc
Confidence 89999999999999999999999999999999999888999999999999999998876544
No 21
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=99.21 E-value=4.7e-11 Score=66.38 Aligned_cols=58 Identities=16% Similarity=0.386 Sum_probs=52.6
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHHcCCCceecC
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFWP 58 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~~~ 58 (115)
|+|.+|+.+|+++|.+++||.++++++.+++++|..+ .+.+.|.+.|+++||.+.+..
T Consensus 17 m~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 77 (79)
T 1kvi_A 17 MTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 77 (79)
T ss_dssp CCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEECC
T ss_pred ccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEecC
Confidence 7899999999999999999999999999999999754 577889999999999887654
No 22
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=99.20 E-value=6.5e-11 Score=64.40 Aligned_cols=58 Identities=16% Similarity=0.389 Sum_probs=52.7
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee--CCHHHHHHHHHHcCCCceecC
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY--VDPNKVLKKVKSTGKRAEFWP 58 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~--~~~~~i~~~i~~~G~~~~~~~ 58 (115)
|+|.+|+.+|+++|.+++||.++++++..++++|..+ .+.+.|.+.|++.||.+.++.
T Consensus 11 m~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~ 70 (72)
T 1fvq_A 11 MTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR 70 (72)
T ss_dssp CCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEE
T ss_pred eecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEcc
Confidence 7899999999999999999999999999999998754 677889999999999987764
No 23
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=99.19 E-value=3.4e-11 Score=65.15 Aligned_cols=55 Identities=25% Similarity=0.479 Sum_probs=49.6
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHHcCCCceec
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGYVDPNKVLKKVKSTGKRAEFW 57 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~~~ 57 (115)
|+|.+|+.+|+++|.++ ||.++++|+.+++++|..+.+ +.|.++|+++||.+...
T Consensus 10 m~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~Gy~~~~~ 64 (67)
T 2kyz_A 10 ISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLEEIDYPVESY 64 (67)
T ss_dssp GGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTTCCCCBC
T ss_pred cCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcCCceeeE
Confidence 78999999999999999 999999999999999987644 88999999999987654
No 24
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=99.19 E-value=1.2e-10 Score=63.76 Aligned_cols=57 Identities=28% Similarity=0.374 Sum_probs=50.5
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee-CCHHHHHHHHHHcCCCceec
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY-VDPNKVLKKVKSTGKRAEFW 57 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~-~~~~~i~~~i~~~G~~~~~~ 57 (115)
|+|.+|+.+|+++|.+++||.++++|+.+++++|..+ ...+.|.+.|+++||.+...
T Consensus 12 m~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~~~~~ 69 (73)
T 1mwy_A 12 MDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDE 69 (73)
T ss_dssp CCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCEEEEC
T ss_pred cCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCccccc
Confidence 7899999999999999999999999999999999865 23677889999999987654
No 25
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=99.18 E-value=1.8e-10 Score=61.61 Aligned_cols=54 Identities=24% Similarity=0.465 Sum_probs=49.3
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHHcCCCc
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRA 54 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~ 54 (115)
|+|.+|+.+|+++|.+++||.++.+++..++++|..+ .+.+.|.+.|+++||.+
T Consensus 11 m~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 67 (69)
T 2qif_A 11 MSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV 67 (69)
T ss_dssp CCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred cccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 7899999999999999999999999999999999753 57888999999999864
No 26
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=99.16 E-value=1.8e-10 Score=63.09 Aligned_cols=57 Identities=18% Similarity=0.346 Sum_probs=51.4
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHHcCCCceec
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFW 57 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~~ 57 (115)
|+|.+|+.+|+++|.+++||.++++++..++++|..+ .+.+.|.+.|+++||.+.++
T Consensus 15 m~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 74 (76)
T 1opz_A 15 MTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVIE 74 (76)
T ss_dssp CCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEECC
T ss_pred cccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceecC
Confidence 7899999999999999999999999999999998753 57888999999999987654
No 27
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.15 E-value=1.6e-10 Score=71.51 Aligned_cols=57 Identities=19% Similarity=0.382 Sum_probs=52.3
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHHcCCCceec
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFW 57 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~~ 57 (115)
|+|.+|+.+|+++|.+++||.++++|+.+++++|..+ ++.++|.++|+++||.+.+.
T Consensus 89 m~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 148 (149)
T 2ew9_A 89 MTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASLA 148 (149)
T ss_dssp CCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEECC
T ss_pred ccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEec
Confidence 7999999999999999999999999999999999864 67899999999999987654
No 28
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=99.15 E-value=1.2e-10 Score=63.73 Aligned_cols=57 Identities=18% Similarity=0.411 Sum_probs=51.0
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHHcCCCceec
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFW 57 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~~ 57 (115)
|+|.+|+.+|+++|.+++||.++++++..++++|..+ ++.+.|.+.|+++||.+.+.
T Consensus 13 m~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 72 (75)
T 1yjr_A 13 MTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSLV 72 (75)
T ss_dssp CCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEES
T ss_pred cccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCceee
Confidence 7899999999999999999999999999999999864 45678899999999987654
No 29
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=99.13 E-value=7.2e-11 Score=65.38 Aligned_cols=58 Identities=17% Similarity=0.294 Sum_probs=52.4
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHHcCCCceecC
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFWP 58 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~~~ 58 (115)
|+|.+|+.+|+++|.+++||.++++++..++++|..+ ++.+.|.+.|+++||.+.++.
T Consensus 12 m~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 72 (77)
T 1y3j_A 12 MTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIE 72 (77)
T ss_dssp GGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEES
T ss_pred eeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEECC
Confidence 7899999999999999999999999999999999754 578889999999999887654
No 30
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.13 E-value=1.7e-10 Score=78.09 Aligned_cols=62 Identities=19% Similarity=0.431 Sum_probs=57.5
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHHcCCCceecCCCCC
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGYVDPNKVLKKVKSTGKRAEFWPYVPY 62 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~~~~~~~~ 62 (115)
|+|.+|+.+|+++|++++||.++++|+.+++++|.+..++++|.++|+++||.+.++..+..
T Consensus 15 MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~~~~ 76 (249)
T 1jk9_B 15 MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKP 76 (249)
T ss_dssp CCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCCEEEEESST
T ss_pred eccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCcccccCCcc
Confidence 89999999999999999999999999999999999878999999999999999988775544
No 31
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.11 E-value=2.4e-10 Score=70.91 Aligned_cols=59 Identities=20% Similarity=0.334 Sum_probs=54.1
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHHcCCCceecCC
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFWPY 59 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~~~~ 59 (115)
|+|.+|+++|+++|.+++||.++++|+.+++++|..+ ++.++|.+.|+++||.+.+...
T Consensus 83 m~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 144 (151)
T 1p6t_A 83 MTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGE 144 (151)
T ss_dssp CCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCS
T ss_pred CCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcCc
Confidence 7999999999999999999999999999999999853 6889999999999999887654
No 32
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=99.10 E-value=5.7e-10 Score=64.46 Aligned_cols=61 Identities=18% Similarity=0.194 Sum_probs=54.4
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHHcCCCceecCCCC
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFWPYVP 61 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~~~~~~ 61 (115)
|+|.+|+.+|+++|.+++||..+.+++..++++|..+ ++.+.|...|+.+||.+.+...+.
T Consensus 25 m~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~ 88 (95)
T 2kkh_A 25 ICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRVNGE 88 (95)
T ss_dssp CCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCCCC
T ss_pred cCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEecCCC
Confidence 7899999999999999999999999999999999854 578889999999999988776543
No 33
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=99.09 E-value=2.8e-10 Score=63.13 Aligned_cols=58 Identities=21% Similarity=0.355 Sum_probs=52.4
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHHcCCCceecC
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFWP 58 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~~~ 58 (115)
|+|.+|+.+|+++|.+++||.++++++..++++|..+ .+.+.|.+.|+++||.+.+..
T Consensus 12 m~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 72 (80)
T 1jww_A 12 MTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKG 72 (80)
T ss_dssp CCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECC
T ss_pred ccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecC
Confidence 7899999999999999999999999999999998753 578889999999999887765
No 34
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=99.09 E-value=1.8e-10 Score=62.11 Aligned_cols=55 Identities=22% Similarity=0.420 Sum_probs=49.7
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHHcCCCce
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAE 55 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~ 55 (115)
|+|.+|+.+|+++|.+++||.++++++..++++|..+ .+.+.+.+.|+++||.+.
T Consensus 12 m~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 69 (71)
T 2ldi_A 12 MRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLA 69 (71)
T ss_dssp CTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEEE
T ss_pred ccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence 7899999999999999999999999999999998753 567889999999999764
No 35
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=99.09 E-value=4.7e-10 Score=66.90 Aligned_cols=57 Identities=23% Similarity=0.390 Sum_probs=51.7
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHHcCCCceec
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFW 57 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~~ 57 (115)
|+|..|+.+|+++|.+++||.++++++.+++++|..+ ++.+.|.+.|+++||.+...
T Consensus 17 m~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~~~Gy~~~~~ 76 (111)
T 2ofg_X 17 MDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLAEP 76 (111)
T ss_dssp CCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHHTTTCCEECC
T ss_pred cCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHHHcCCeeeec
Confidence 7899999999999999999999999999999999864 57788999999999987653
No 36
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=99.00 E-value=1.4e-09 Score=70.85 Aligned_cols=59 Identities=19% Similarity=0.399 Sum_probs=52.9
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHHcCCCceecCC
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFWPY 59 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~~~~ 59 (115)
|+|.+|+.+|+++|.+++||.++++++..++++|..+ ++.++|.+.|+++||.+.++..
T Consensus 131 m~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 192 (202)
T 2rop_A 131 MTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVSE 192 (202)
T ss_dssp CCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC--
T ss_pred ccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcCC
Confidence 8999999999999999999999999999999999853 6788999999999999887653
No 37
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.99 E-value=8.3e-10 Score=60.11 Aligned_cols=54 Identities=28% Similarity=0.473 Sum_probs=46.6
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHHcCCCceecC
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGYVDPNKVLKKVKSTGKRAEFWP 58 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~~~~ 58 (115)
|+|.+|+.+|+++|.+++||.++++++..++++|.++.. .+.|+++||.+.+.+
T Consensus 12 m~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~~~Gy~~~~~~ 65 (71)
T 2aj0_A 12 LSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVEQAGAFEHLKI 65 (71)
T ss_dssp CCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHHHHHTTTTCEE
T ss_pred cccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHHHhCCCccccc
Confidence 789999999999999999999999999999999987653 457788998765544
No 38
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.82 E-value=1.3e-08 Score=62.66 Aligned_cols=58 Identities=17% Similarity=0.306 Sum_probs=51.9
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHHcCCCceecC
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFWP 58 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~~~ 58 (115)
|+|.+|+.+|+++|.+++||.++.+++.++++.|..+ .+.+.+.+.|++.||.+.+..
T Consensus 13 m~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 73 (149)
T 2ew9_A 13 MTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVME 73 (149)
T ss_dssp CCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECS
T ss_pred eecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEeec
Confidence 7999999999999999999999999999999998753 577889999999999877543
No 39
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.65 E-value=7.5e-08 Score=73.61 Aligned_cols=58 Identities=21% Similarity=0.303 Sum_probs=53.0
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHHcCCCceecC
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRAEFWP 58 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~~~ 58 (115)
|+|.+|+.+||++|++++||.++++|+.+++++|..+ .+.+++.++|++.||++....
T Consensus 11 M~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~~~~ 71 (723)
T 3j09_A 11 MTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVVDEQ 71 (723)
T ss_dssp CCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEESSCC
T ss_pred CCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCcccccc
Confidence 8999999999999999999999999999999999853 689999999999999876543
No 40
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.58 E-value=1.9e-07 Score=57.68 Aligned_cols=54 Identities=19% Similarity=0.398 Sum_probs=48.5
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHHcCCCc
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKSTGKRA 54 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~ 54 (115)
|+|.+|+.+|+++|.+++||.++.+++..+++.|..+ .+...+.+.+++.||.+
T Consensus 15 m~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 71 (151)
T 1p6t_A 15 MTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV 71 (151)
T ss_dssp CCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred CcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCcc
Confidence 7999999999999999999999999999999988743 57788899999999864
No 41
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.49 E-value=1.9e-07 Score=60.67 Aligned_cols=50 Identities=16% Similarity=0.412 Sum_probs=46.0
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee---CCHHHHHHHHHHc
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY---VDPNKVLKKVKST 50 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~---~~~~~i~~~i~~~ 50 (115)
|+|.+|+.+|+++|.+++||.++.+++..++++|..+ ++.+.|.+.|+++
T Consensus 29 m~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~ 81 (202)
T 2rop_A 29 MHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEAL 81 (202)
T ss_dssp GGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTS
T ss_pred eEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHh
Confidence 7899999999999999999999999999999999754 5778899999988
No 42
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=93.75 E-value=0.17 Score=29.06 Aligned_cols=50 Identities=12% Similarity=0.185 Sum_probs=36.8
Q ss_pred HHHHHHhCCCCceEEEEec-----cCCE--EEEEee-CCHHHHHHHHHHcCCCceecC
Q 033623 9 KVRNAVSSIRGAKSVEVNR-----KQSR--VTVTGY-VDPNKVLKKVKSTGKRAEFWP 58 (115)
Q Consensus 9 ~v~~~l~~~~gv~~~~v~~-----~~~~--v~v~~~-~~~~~i~~~i~~~G~~~~~~~ 58 (115)
.+-+.|.+++||..+++.. .+.. ++|+|+ ++.++|.++|++.|-...-+.
T Consensus 23 dlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~GgvIHSID 80 (100)
T 3bpd_A 23 VFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVIHSVD 80 (100)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEeee
Confidence 3567789999998877654 3333 345665 999999999999997665554
No 43
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=93.24 E-value=0.3 Score=27.88 Aligned_cols=50 Identities=12% Similarity=0.266 Sum_probs=36.7
Q ss_pred HHHHHHhCCCCceEEEEec-----cCCE--EEEEee-CCHHHHHHHHHHcCCCceecC
Q 033623 9 KVRNAVSSIRGAKSVEVNR-----KQSR--VTVTGY-VDPNKVLKKVKSTGKRAEFWP 58 (115)
Q Consensus 9 ~v~~~l~~~~gv~~~~v~~-----~~~~--v~v~~~-~~~~~i~~~i~~~G~~~~~~~ 58 (115)
.+-+.|.+++||..+++.. .+.. ++|+|+ ++.++|.++|++.|-..+-+.
T Consensus 22 d~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg~IHSID 79 (96)
T 2x3d_A 22 DLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGCAIHSID 79 (96)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEeee
Confidence 3567789999998877654 3333 345675 999999999999997665544
No 44
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=92.85 E-value=0.26 Score=28.17 Aligned_cols=50 Identities=18% Similarity=0.355 Sum_probs=36.2
Q ss_pred HHHHHHhCCCCceEEEEec-----cCCEE--EEEee-CCHHHHHHHHHHcCCCceecC
Q 033623 9 KVRNAVSSIRGAKSVEVNR-----KQSRV--TVTGY-VDPNKVLKKVKSTGKRAEFWP 58 (115)
Q Consensus 9 ~v~~~l~~~~gv~~~~v~~-----~~~~v--~v~~~-~~~~~i~~~i~~~G~~~~~~~ 58 (115)
.+-+.|.+++||..+++.. .+..+ +|+|+ ++.++|.++|++.|-..+-+.
T Consensus 23 d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg~IHSID 80 (97)
T 2raq_A 23 EYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSIHSVD 80 (97)
T ss_dssp HHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEeee
Confidence 3456788889988776543 44444 45565 999999999999997665544
No 45
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=86.47 E-value=3 Score=23.61 Aligned_cols=43 Identities=9% Similarity=0.217 Sum_probs=29.9
Q ss_pred HHHHHHHHhCCCCceEEEEeccCCEEEEEee-CCHHHHHHHHHH
Q 033623 7 ERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY-VDPNKVLKKVKS 49 (115)
Q Consensus 7 ~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~-~~~~~i~~~i~~ 49 (115)
...|.++|.+++|+.-..++...+++.|+-+ -+.+++.+.|++
T Consensus 19 ~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i~~ 62 (95)
T 2jsx_A 19 ISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIES 62 (95)
T ss_dssp HHHHHHHHTTSTTEEEEEEETTTTEEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCeEEEEecCCCCCEEEEEEeCCHHHHHHHHHH
Confidence 5678999999999954455666788776633 466666666644
No 46
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=83.53 E-value=3.1 Score=26.22 Aligned_cols=44 Identities=11% Similarity=0.256 Sum_probs=35.5
Q ss_pred HhHHHHHHHHHhCCCCceEEEEeccCC---------------EEEEEee---CCHHHHHHHH
Q 033623 4 DGCERKVRNAVSSIRGAKSVEVNRKQS---------------RVTVTGY---VDPNKVLKKV 47 (115)
Q Consensus 4 ~~C~~~v~~~l~~~~gv~~~~v~~~~~---------------~v~v~~~---~~~~~i~~~i 47 (115)
.+|-+-+|..+.+++||.++.+-...+ .|.|..+ ++.++|++..
T Consensus 9 gGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F 70 (168)
T 4gwb_A 9 GGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELF 70 (168)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHH
T ss_pred ccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHH
Confidence 479999999999999999999987654 4556654 7888888765
No 47
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=78.93 E-value=3.9 Score=26.51 Aligned_cols=45 Identities=20% Similarity=0.183 Sum_probs=35.1
Q ss_pred HhHHHHHHHHHhCCCCceEEEEeccCCE-------------------EEEEee---CCHHHHHHHHH
Q 033623 4 DGCERKVRNAVSSIRGAKSVEVNRKQSR-------------------VTVTGY---VDPNKVLKKVK 48 (115)
Q Consensus 4 ~~C~~~v~~~l~~~~gv~~~~v~~~~~~-------------------v~v~~~---~~~~~i~~~i~ 48 (115)
.+|-+-+|+.+.+++||.++.+-...+. |.|..+ ++.++|++..-
T Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F~ 116 (199)
T 1fvg_A 50 MGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFW 116 (199)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 4799999999999999999998875543 556654 78888887653
No 48
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=75.27 E-value=5.6 Score=25.61 Aligned_cols=44 Identities=18% Similarity=0.224 Sum_probs=34.4
Q ss_pred HhHHHHHHHHHhCCCCceEEEEeccCCE-------------------EEEEee---CCHHHHHHHH
Q 033623 4 DGCERKVRNAVSSIRGAKSVEVNRKQSR-------------------VTVTGY---VDPNKVLKKV 47 (115)
Q Consensus 4 ~~C~~~v~~~l~~~~gv~~~~v~~~~~~-------------------v~v~~~---~~~~~i~~~i 47 (115)
.+|-+-+|..+.+++||.++.+-...+. |.|..+ ++.++|++..
T Consensus 9 gGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f 74 (193)
T 3bqh_A 9 GGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYF 74 (193)
T ss_dssp ESCHHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHH
T ss_pred cCCeeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHH
Confidence 4799999999999999999998765442 555554 7888888755
No 49
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=75.05 E-value=5.4 Score=26.88 Aligned_cols=44 Identities=23% Similarity=0.261 Sum_probs=34.6
Q ss_pred HhHHHHHHHHHhCCCCceEEEEeccCCE-------------------EEEEee---CCHHHHHHHH
Q 033623 4 DGCERKVRNAVSSIRGAKSVEVNRKQSR-------------------VTVTGY---VDPNKVLKKV 47 (115)
Q Consensus 4 ~~C~~~v~~~l~~~~gv~~~~v~~~~~~-------------------v~v~~~---~~~~~i~~~i 47 (115)
.+|-+-+|+.+.+++||.++.+-...+. |.|..+ ++.++|++..
T Consensus 101 gGCFWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~F 166 (261)
T 2j89_A 101 AGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVL 166 (261)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHH
Confidence 4799999999999999999998875543 556654 7788887755
No 50
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=74.14 E-value=6 Score=25.85 Aligned_cols=45 Identities=13% Similarity=0.059 Sum_probs=34.9
Q ss_pred HhHHHHHHHHHhCCCCceEEEEeccCC-------------------EEEEEee---CCHHHHHHHHH
Q 033623 4 DGCERKVRNAVSSIRGAKSVEVNRKQS-------------------RVTVTGY---VDPNKVLKKVK 48 (115)
Q Consensus 4 ~~C~~~v~~~l~~~~gv~~~~v~~~~~-------------------~v~v~~~---~~~~~i~~~i~ 48 (115)
.+|-+-+|+.+.+++||.++.+-...+ .|.|..+ ++.++|++..-
T Consensus 49 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F~ 115 (211)
T 1ff3_A 49 MGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFW 115 (211)
T ss_dssp CSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred cCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHHH
Confidence 479999999999999999999887643 2556654 78888887653
No 51
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=72.85 E-value=8 Score=25.12 Aligned_cols=44 Identities=18% Similarity=0.222 Sum_probs=34.8
Q ss_pred HhHHHHHHHHHhCCCCceEEEEeccCC---------------EEEEEee---CCHHHHHHHH
Q 033623 4 DGCERKVRNAVSSIRGAKSVEVNRKQS---------------RVTVTGY---VDPNKVLKKV 47 (115)
Q Consensus 4 ~~C~~~v~~~l~~~~gv~~~~v~~~~~---------------~v~v~~~---~~~~~i~~~i 47 (115)
.+|-+-+|..+.+++||.++.+-...+ .|.|..+ ++.++|++..
T Consensus 32 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp~~iSy~~LL~~F 93 (203)
T 1nwa_A 32 GGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFF 93 (203)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCHHHHHHHH
T ss_pred cCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECCCcCCHHHHHHHH
Confidence 479999999999999999999887554 3456654 7888888765
No 52
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=70.22 E-value=5.7 Score=22.48 Aligned_cols=22 Identities=27% Similarity=0.404 Sum_probs=17.8
Q ss_pred HHHHHHHHhCCCCceEEEEecc
Q 033623 7 ERKVRNAVSSIRGAKSVEVNRK 28 (115)
Q Consensus 7 ~~~v~~~l~~~~gv~~~~v~~~ 28 (115)
...|+++|..++||.++++++.
T Consensus 62 ~~~i~~al~~l~gv~~v~V~l~ 83 (103)
T 1uwd_A 62 LSDAEEAIKKIEGVNNVEVELT 83 (103)
T ss_dssp HHHHHHHHHTSSSCCEEEEEEC
T ss_pred HHHHHHHHHhCCCcceEEEEEe
Confidence 4568889999999998887743
No 53
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=70.04 E-value=5.9 Score=22.42 Aligned_cols=22 Identities=36% Similarity=0.510 Sum_probs=17.9
Q ss_pred HHHHHHHHhCCCCceEEEEecc
Q 033623 7 ERKVRNAVSSIRGAKSVEVNRK 28 (115)
Q Consensus 7 ~~~v~~~l~~~~gv~~~~v~~~ 28 (115)
...|+++|..++||.++++++.
T Consensus 61 ~~~i~~al~~l~gv~~V~V~l~ 82 (103)
T 3cq1_A 61 GEAVRQALSRLPGVEEVEVEVT 82 (103)
T ss_dssp HHHHHHHHHTSTTCCEEEEEEC
T ss_pred HHHHHHHHHhCCCceeEEEEEe
Confidence 4578899999999998888754
No 54
>3b1j_C CP12; alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_C*
Probab=64.32 E-value=0.95 Score=19.45 Aligned_cols=14 Identities=43% Similarity=0.748 Sum_probs=10.7
Q ss_pred ccCCccCCCCC--ccc
Q 033623 101 TTLFSDENPNA--CSI 114 (115)
Q Consensus 101 ~~~FsDenp~a--CsI 114 (115)
...|.|+||.| |.|
T Consensus 7 lE~yC~enPea~Ecr~ 22 (26)
T 3b1j_C 7 FGDYCSENPDAAECLI 22 (26)
T ss_dssp HHHHHHHCTTSTTTCC
T ss_pred HHHHHHHCCCcHHHHh
Confidence 46789999987 654
No 55
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=63.60 E-value=12 Score=25.99 Aligned_cols=44 Identities=23% Similarity=0.243 Sum_probs=34.9
Q ss_pred HhHHHHHHHHHhCCCCceEEEEeccCCE-----------------EEEEee---CCHHHHHHHH
Q 033623 4 DGCERKVRNAVSSIRGAKSVEVNRKQSR-----------------VTVTGY---VDPNKVLKKV 47 (115)
Q Consensus 4 ~~C~~~v~~~l~~~~gv~~~~v~~~~~~-----------------v~v~~~---~~~~~i~~~i 47 (115)
.+|-+-+|..+.+++||.++.+-...+. |.|..+ ++.++|++..
T Consensus 9 gGCFWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp~~isy~~LL~~f 72 (313)
T 3e0m_A 9 GGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYY 72 (313)
T ss_dssp CSCHHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECTTTSCHHHHHHHH
T ss_pred cCCchhhHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECCCcCCHHHHHHHH
Confidence 4789999999999999999998876543 556654 7888888755
No 56
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=59.77 E-value=19 Score=19.74 Aligned_cols=49 Identities=16% Similarity=0.208 Sum_probs=34.2
Q ss_pred CCcHhHHHHHHHHHhCCC-CceEEEEeccCCEEEEEee--CCHHHHHHHHHHcCCCceecC
Q 033623 1 MDCDGCERKVRNAVSSIR-GAKSVEVNRKQSRVTVTGY--VDPNKVLKKVKSTGKRAEFWP 58 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~-gv~~~~v~~~~~~v~v~~~--~~~~~i~~~i~~~G~~~~~~~ 58 (115)
+.|+.-.-+++++|.+++ . .+.+.|..+ .....|...+++.|+......
T Consensus 9 l~CP~Pvl~~kkal~~l~~~---------G~~L~V~~dd~~a~~dI~~~~~~~G~~v~~~~ 60 (87)
T 3hz7_A 9 QVCPIPVIRAKKALAELGEA---------GGVVTVLVDNDISRQNLQKMAEGMGYQSEYLE 60 (87)
T ss_dssp CCTTHHHHHHHHHHHTTGGG---------CCEEEEEESSHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCHHHHHHHHHHHhccCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence 368888999999999873 2 123444433 455678888899999876554
No 57
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=57.21 E-value=9.1 Score=21.88 Aligned_cols=23 Identities=17% Similarity=0.286 Sum_probs=18.0
Q ss_pred HHHHHHHH-hCCCCceEEEEeccC
Q 033623 7 ERKVRNAV-SSIRGAKSVEVNRKQ 29 (115)
Q Consensus 7 ~~~v~~~l-~~~~gv~~~~v~~~~ 29 (115)
...|+++| .+++||.++++++.-
T Consensus 64 ~~~i~~al~~~l~Gv~~V~V~l~~ 87 (108)
T 3lno_A 64 VSDVKKVLSTNVPEVNEIEVNVVW 87 (108)
T ss_dssp HHHHHHHHHHHCTTCCCEEEEECC
T ss_pred HHHHHHHHHHhCCCCceEEEEEEe
Confidence 45688888 899999988776543
No 58
>2k1h_A Uncharacterized protein Ser13; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Staphylococcus epidermidis}
Probab=56.14 E-value=22 Score=20.00 Aligned_cols=38 Identities=18% Similarity=0.244 Sum_probs=27.8
Q ss_pred HHHHHhCCCCceEEEEeccCCEEEEEe--eCCHHHHHHHHHH
Q 033623 10 VRNAVSSIRGAKSVEVNRKQSRVTVTG--YVDPNKVLKKVKS 49 (115)
Q Consensus 10 v~~~l~~~~gv~~~~v~~~~~~v~v~~--~~~~~~i~~~i~~ 49 (115)
+-+.|-.++||.+|-+. .+=++|+- +.+++.|...|..
T Consensus 41 LA~~LF~i~gVk~Vf~g--~dFITVtK~~~~dW~~ikp~I~~ 80 (94)
T 2k1h_A 41 FINRLFEIEGVKSIFYV--LDFISIDKEDNANWNELLPQIEN 80 (94)
T ss_dssp HHHHHHTSTTEEEEEEE--TTEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhCCCCeeEEEEe--CCEEEEecCCCCCHHHHHHHHHH
Confidence 34556689999987665 67788874 4789988877754
No 59
>3v4k_A DNA DC->DU-editing enzyme apobec-3G; antiviral defense, HOST-virus interaction, hydrola metal-binding, nucleus; HET: DNA; 1.38A {Homo sapiens} PDB: 3v4j_A* 3ir2_A* 2kem_A* 2jyw_A* 2kbo_A* 3e1u_A* 3iqs_A*
Probab=54.86 E-value=13 Score=24.08 Aligned_cols=57 Identities=12% Similarity=0.296 Sum_probs=35.8
Q ss_pred CcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHHHHcCCCceecCCCCC
Q 033623 2 DCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGYVDPNKVLKKVKSTGKRAEFWPYVPY 62 (115)
Q Consensus 2 ~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~~~~~~~~ 62 (115)
-|..|+.+|-.-|.+.+.|. ..|- ..++--. +-+-.+=+..|.++|-++.++....+
T Consensus 110 PC~~CA~~v~~FL~~~~~v~-L~If--~aRLY~~-~~~~~~gLr~L~~aG~~v~iM~~~ef 166 (203)
T 3v4k_A 110 PCFSCAQEMAKFISKNKHVS-LCIK--TARIYDD-QGRCQEGLRTLAEAGAKISIMTYSEF 166 (203)
T ss_pred ChHHHHHHHHHHHhhCCCeE-EEEE--EEeeccc-CchHHHHHHHHHHCCCeEEecCHHHH
Confidence 39999999999999887763 1111 1111111 22334556677788988888876443
No 60
>2nyt_A Probable C->U-editing enzyme apobec-2; cytidine deaminase, zinc-ION binding, hydrolase; 2.50A {Homo sapiens} PDB: 2rpz_A
Probab=48.26 E-value=12 Score=23.99 Aligned_cols=53 Identities=15% Similarity=0.276 Sum_probs=35.1
Q ss_pred CcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEe--eCCHHHHHHHHHHcCCCceecCC
Q 033623 2 DCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTG--YVDPNKVLKKVKSTGKRAEFWPY 59 (115)
Q Consensus 2 ~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~--~~~~~~i~~~i~~~G~~~~~~~~ 59 (115)
-|..|+..|-.+|.+.+||..+-+-.. ... +-....-++.|+++|.+++.+..
T Consensus 93 PC~~Ca~aIi~al~~~~gI~rVV~~~~-----d~~~~~p~~~~g~~~L~~aGI~V~~~~~ 147 (190)
T 2nyt_A 93 PCAACADRIIKTLSKTKNLRLLILVGR-----LFMWEEPEIQAALKKLKEAGCKLRIMKP 147 (190)
T ss_pred hHHHHHHHHHHhhhhcCCccEEEEEee-----cCCcCChHHHHHHHHHHHCCCEEEEecH
Confidence 389999999999999899875533211 000 01123566788999988876653
No 61
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=47.35 E-value=14 Score=20.00 Aligned_cols=18 Identities=11% Similarity=0.314 Sum_probs=16.1
Q ss_pred CCHHHHHHHHHHcCCCce
Q 033623 38 VDPNKVLKKVKSTGKRAE 55 (115)
Q Consensus 38 ~~~~~i~~~i~~~G~~~~ 55 (115)
++.+.+++.|+..||.+.
T Consensus 61 id~d~l~~~L~~~g~~~~ 78 (81)
T 2fi0_A 61 TPMDKIVRTLEANGYEVI 78 (81)
T ss_dssp CCHHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHcCCEee
Confidence 789999999999999764
No 62
>3pim_A Peptide methionine sulfoxide reductase; methionine-S-sulfoxide reductase, oxidoreductase; 1.90A {Saccharomyces cerevisiae} PDB: 3pil_A 3pin_B
Probab=43.96 E-value=12 Score=23.87 Aligned_cols=27 Identities=11% Similarity=0.100 Sum_probs=22.0
Q ss_pred HhHHHHHHHHHhCC--CCceEEEEeccCC
Q 033623 4 DGCERKVRNAVSSI--RGAKSVEVNRKQS 30 (115)
Q Consensus 4 ~~C~~~v~~~l~~~--~gv~~~~v~~~~~ 30 (115)
.+|-+-+|..+.++ +||.++.+-...+
T Consensus 26 gGCFWg~E~~F~~l~g~GV~~t~~GYagG 54 (187)
T 3pim_A 26 CGCFWGTEHMYRKYLNDRIVDCKVGYANG 54 (187)
T ss_dssp SSCHHHHHHHHHHHHGGGSSEEEEEEEEE
T ss_pred cCCchhhHHHHHHhcCCCeEEEEeeecCC
Confidence 47889999999999 9999888766544
No 63
>3qv1_G CP12 protein; rossman fold, calvin cycle, NAD, chloroplast, oxidoreductase binding complex; HET: NAD; 2.00A {Arabidopsis thaliana} PDB: 3rvd_I*
Probab=43.35 E-value=3.7 Score=22.74 Aligned_cols=16 Identities=19% Similarity=0.526 Sum_probs=12.8
Q ss_pred ccccCCccCCCCC--ccc
Q 033623 99 RLTTLFSDENPNA--CSI 114 (115)
Q Consensus 99 ~~~~~FsDenp~a--CsI 114 (115)
.+.-.|+|+||.+ |.|
T Consensus 62 t~lE~yC~~nPea~ECr~ 79 (82)
T 3qv1_G 62 DPLEEYCKDNPETNECRT 79 (82)
T ss_dssp CHHHHHHHHCTTSTTTCC
T ss_pred ChHHHHHHHCCCchHhhh
Confidence 4468999999997 765
No 64
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=43.18 E-value=43 Score=18.75 Aligned_cols=49 Identities=12% Similarity=0.109 Sum_probs=34.5
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee--CCHHHHHHHHHHcCCCceecC
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY--VDPNKVLKKVKSTGKRAEFWP 58 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~--~~~~~i~~~i~~~G~~~~~~~ 58 (115)
+.|+.-.-+++++|.+++. .+.+.|..+ .....|...+++.|+......
T Consensus 34 l~CP~Pvl~tkkaL~~l~~---------Ge~L~Vl~dd~~a~~dI~~~~~~~G~~v~~~e 84 (98)
T 1jdq_A 34 EVCPVPDVETKRALQNMKP---------GEILEVWIDYPMSKERIPETVKKLGHEVLEIE 84 (98)
T ss_dssp CCSSHHHHHHHHHHHTCCT---------TCEEEEEESSCTHHHHHHHHHHHSSCCEEEEE
T ss_pred CCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence 3688889999999998742 223444433 446778888899999876543
No 65
>2w7v_A General secretion pathway protein L; transport, type II secretion, transport protein; 2.30A {Vibrio parahaemolyticus}
Probab=41.02 E-value=48 Score=18.65 Aligned_cols=49 Identities=8% Similarity=0.073 Sum_probs=32.7
Q ss_pred HHHHHHhCCCCce--EEEEeccCCEEEEEe---e-CCHHHHHHHHHHcCCCceecC
Q 033623 9 KVRNAVSSIRGAK--SVEVNRKQSRVTVTG---Y-VDPNKVLKKVKSTGKRAEFWP 58 (115)
Q Consensus 9 ~v~~~l~~~~gv~--~~~v~~~~~~v~v~~---~-~~~~~i~~~i~~~G~~~~~~~ 58 (115)
.+..+|...+++. +++.|-..+.+.+.- + ...+.+...+.+ ||.++.-.
T Consensus 16 ~L~~~l~~vp~l~~~sLryD~~R~ELrlq~~A~dF~~~E~lr~~l~~-gf~Ve~Gs 70 (95)
T 2w7v_A 16 ALPATLGQVKDLEITSFKYDGQRGEVRIHARSSDFQPFEQARVKLAE-KFNVEQGQ 70 (95)
T ss_dssp GHHHHHHTSTTCEEEEEEEETTTTEEEEEEEESSSHHHHHHHHHHHT-TEEEEECC
T ss_pred HHHHHhccCCCceEEEEeecCCCCeEEEEEecCCHHHHHHHHHHhhc-CcEEehhh
Confidence 3456778888876 555666777777652 2 346677777865 88877654
No 66
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=40.52 E-value=43 Score=17.92 Aligned_cols=49 Identities=8% Similarity=0.036 Sum_probs=33.8
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee--CCHHHHHHHHHHcCCCceecC
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY--VDPNKVLKKVKSTGKRAEFWP 58 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~--~~~~~i~~~i~~~G~~~~~~~ 58 (115)
+.|+.-.-+++++|.+++. .+.+.|..+ .....|...+++.|+......
T Consensus 18 l~CP~Pvl~~kkal~~l~~---------G~~l~V~~dd~~a~~di~~~~~~~G~~~~~~~ 68 (82)
T 3lvj_C 18 LRCPEPVMMVRKTVRNMQP---------GETLLIIADDPATTRDIPGFCTFMEHELVAKE 68 (82)
T ss_dssp CCTTHHHHHHHHHHHTSCT---------TCEEEEEECCTTHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence 3688889999999998742 123444432 445678888899999876543
No 67
>3pro_C Alpha-lytic protease; Pro region, foldase, protein folding, serine protease, hydro hydrolase inhibitor complex; HET: AES; 1.80A {Lysobacter enzymogenes} SCOP: d.52.1.1 d.52.1.1 PDB: 2pro_A* 4pro_C
Probab=38.89 E-value=70 Score=19.92 Aligned_cols=36 Identities=19% Similarity=0.148 Sum_probs=26.2
Q ss_pred CCceEEEEeccCCEEEEEee-CCHHHHHHHHHHcCCC
Q 033623 18 RGAKSVEVNRKQSRVTVTGY-VDPNKVLKKVKSTGKR 53 (115)
Q Consensus 18 ~gv~~~~v~~~~~~v~v~~~-~~~~~i~~~i~~~G~~ 53 (115)
.||.+|-||..+++|.|+.+ -........++.+|-.
T Consensus 114 ~~v~~W~VD~~tN~VVV~a~~~~~~aa~~f~~~AG~~ 150 (166)
T 3pro_C 114 DGVQSWYVDPRSNAVVVKVDDGATDAGVDFVALSGAD 150 (166)
T ss_dssp TTEEEEEEEGGGTEEEEEEETTCHHHHHHHHHHHTCC
T ss_pred CCCceEEEeCCCCeEEEEeCCCChHHHHHHHHHhCCC
Confidence 57889999999999999865 3344455555677744
No 68
>1gh8_A Translation elongation factor 1BETA; alpha-beta sandwich, gene regulation, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.58.12.1
Probab=38.57 E-value=28 Score=19.37 Aligned_cols=20 Identities=25% Similarity=0.493 Sum_probs=16.7
Q ss_pred HHHHHHHHhCCCCceEEEEe
Q 033623 7 ERKVRNAVSSIRGAKSVEVN 26 (115)
Q Consensus 7 ~~~v~~~l~~~~gv~~~~v~ 26 (115)
...++..+++++||+++++.
T Consensus 64 td~lee~i~~~e~Vqsvdv~ 83 (89)
T 1gh8_A 64 TEAAEESLSGIEGVSNIEVT 83 (89)
T ss_dssp GGHHHHHHTTSCSSEEEEEE
T ss_pred hHHHHHHHhccCCccEEEEE
Confidence 34678899999999999875
No 69
>1pav_A Hypothetical protein TA1170/TA1414; structural genomics, structure, fast NMR, semiautomated analysis; NMR {Thermoplasma acidophilum} SCOP: d.68.3.3
Probab=36.45 E-value=40 Score=17.68 Aligned_cols=47 Identities=11% Similarity=0.061 Sum_probs=31.7
Q ss_pred CCcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee--CCHHHHHHHHHHcCCCcee
Q 033623 1 MDCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY--VDPNKVLKKVKSTGKRAEF 56 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~--~~~~~i~~~i~~~G~~~~~ 56 (115)
+.|+.-.-+++++|.+++.- +.+.|..+ .....|...+++.|+....
T Consensus 14 l~CP~Pvl~~k~al~~l~~G---------~~L~V~~dd~~a~~di~~~~~~~G~~~~~ 62 (78)
T 1pav_A 14 SYCPGPLMELIKAYKQAKVG---------EVISVYSTDAGTKKDAPAWIQKSGQELVG 62 (78)
T ss_dssp CSSCTTHHHHHHHHTTSCTT---------CCEECCBSSSCHHHHHHHHHHHHTEEECC
T ss_pred CCCCHHHHHHHHHHHcCCCC---------CEEEEEECCccHHHHHHHHHHHCCCEEEE
Confidence 35778888999999987422 22333332 3456788888999987654
No 70
>2lj9_A CP12 domain-containing protein 2; helix, protein binding, intrinsically disordered protein; NMR {Arabidopsis thaliana}
Probab=35.86 E-value=5.5 Score=22.81 Aligned_cols=16 Identities=19% Similarity=0.526 Sum_probs=12.8
Q ss_pred ccccCCccCCCCC--ccc
Q 033623 99 RLTTLFSDENPNA--CSI 114 (115)
Q Consensus 99 ~~~~~FsDenp~a--CsI 114 (115)
.....|.||||.+ |.|
T Consensus 79 t~lE~yCdeNPea~ECrv 96 (99)
T 2lj9_A 79 DPLEEYCKDNPETNECRT 96 (99)
T ss_dssp CHHHHHHHHCTTTTSTTT
T ss_pred ChHHHHHHHCCCchHHhh
Confidence 3468999999998 765
No 71
>2v50_A Multidrug resistance protein MEXB; DDM, RND, membrane, detergent, transport, cell membrane, transmembrane, membrane protein; HET: LMT; 3.00A {Pseudomonas aeruginosa PA01}
Probab=34.38 E-value=82 Score=25.25 Aligned_cols=43 Identities=14% Similarity=0.261 Sum_probs=32.1
Q ss_pred HHHHHHHhCCCCceEEEEeccCCEEEEEe--------eCCHHHHHHHHHHc
Q 033623 8 RKVRNAVSSIRGAKSVEVNRKQSRVTVTG--------YVDPNKVLKKVKST 50 (115)
Q Consensus 8 ~~v~~~l~~~~gv~~~~v~~~~~~v~v~~--------~~~~~~i~~~i~~~ 50 (115)
..+++.|++++||.+++++-....+.|.- .++.++|.++|+..
T Consensus 160 ~~i~~~L~~i~gv~~v~~~g~~~~i~i~id~~kl~~~Gls~~~v~~~l~~~ 210 (1052)
T 2v50_A 160 SNIQDPLSRTKGVGDFQVFGSQYSMRIWLDPAKLNSYQLTPGDVSSAIQAQ 210 (1052)
T ss_dssp HHTHHHHHTSTTEEEEEESSCCEEEEEEECHHHHTTTTCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCceEEEecCCcEEEEEEeCHHHHHHcCCCHHHHHHHHHhc
Confidence 56899999999999999875333445542 17888899999754
No 72
>2yy3_A Elongation factor 1-beta; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 2.50A {Pyrococcus horikoshii}
Probab=34.28 E-value=27 Score=19.53 Aligned_cols=20 Identities=20% Similarity=0.272 Sum_probs=17.1
Q ss_pred HHHHHHHHhCCCCceEEEEe
Q 033623 7 ERKVRNAVSSIRGAKSVEVN 26 (115)
Q Consensus 7 ~~~v~~~l~~~~gv~~~~v~ 26 (115)
...++.++++++||+++++.
T Consensus 67 tD~lee~i~~~e~VqSvdV~ 86 (91)
T 2yy3_A 67 FDEVAEKFEEVENVESAEVE 86 (91)
T ss_dssp HHHHHHHHHHSTTEEEEEEE
T ss_pred cHHHHHHHhcCCCceEEEEE
Confidence 46788999999999999875
No 73
>4eqa_C PA1845 protein, putative uncharacterized protein; type VI secretion, T6S, antitoxin-toxin complex, unknown FUN; 1.60A {Pseudomonas aeruginosa} PDB: 4fgi_B
Probab=33.22 E-value=9.5 Score=22.19 Aligned_cols=14 Identities=50% Similarity=0.997 Sum_probs=9.5
Q ss_pred ccccccCCccCCCC
Q 033623 97 DERLTTLFSDENPN 110 (115)
Q Consensus 97 ~~~~~~~FsDenp~ 110 (115)
+.+...|||.|+||
T Consensus 24 dehvrvmfsnedpn 37 (153)
T 4eqa_C 24 DEHVRVMFSNEDPN 37 (153)
T ss_dssp CSSEEEEEECCCTT
T ss_pred cceEEEEeccCCCC
Confidence 33556788877776
No 74
>2hiy_A Hypothetical protein; COG3797, structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GOL; 1.40A {Streptococcus pneumoniae} SCOP: d.356.1.1
Probab=31.96 E-value=96 Score=19.44 Aligned_cols=46 Identities=15% Similarity=0.233 Sum_probs=32.5
Q ss_pred HHHHHhCCCCceEEEEeccCCEEEEEeeCCHHHHHHHH-----HHcCCCcee
Q 033623 10 VRNAVSSIRGAKSVEVNRKQSRVTVTGYVDPNKVLKKV-----KSTGKRAEF 56 (115)
Q Consensus 10 v~~~l~~~~gv~~~~v~~~~~~v~v~~~~~~~~i~~~i-----~~~G~~~~~ 56 (115)
+++.|..+ |-.+|+.-+.++.+..+++.+.++|...| ++.|+.+.+
T Consensus 27 Lr~~l~~l-Gf~~V~TyI~SGNvvF~s~~~~~~l~~~ie~~l~~~fg~~v~v 77 (183)
T 2hiy_A 27 LRQELTNL-GLEKVESYINSGNIFFTSIDSKAQLVEKLETFFAVHYPFIQSF 77 (183)
T ss_dssp HHHHHHHH-TCEEEEEETTTTEEEEEECSCHHHHHHHHHHHHHHHCTTCCCC
T ss_pred HHHHHHHc-CCccceEEEecCCEEEecCCCHHHHHHHHHHHHHHhcCCCCCE
Confidence 45556654 88999999999999988765656555444 357877643
No 75
>2y9j_Y Lipoprotein PRGK, protein PRGK; protein transport, type III secretion, IR1, inner membrane R C24-fold; 6.40A {Salmonella enterica subsp}
Probab=31.51 E-value=42 Score=20.91 Aligned_cols=21 Identities=19% Similarity=0.441 Sum_probs=17.0
Q ss_pred HHHHHHHHhCCCCceEEEEec
Q 033623 7 ERKVRNAVSSIRGAKSVEVNR 27 (115)
Q Consensus 7 ~~~v~~~l~~~~gv~~~~v~~ 27 (115)
...+++.|..++||.+++|.+
T Consensus 90 e~ELartI~~i~gV~~ArVhl 110 (170)
T 2y9j_Y 90 EQRLEQSLQTMEGVLSARVHI 110 (170)
T ss_dssp HHHHHHHHTTSTTEEEEEEEE
T ss_pred HHHHHHHHHcCCCeeEEEEEE
Confidence 345788999999999988764
No 76
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=31.39 E-value=56 Score=18.27 Aligned_cols=47 Identities=11% Similarity=0.061 Sum_probs=31.3
Q ss_pred CcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEee--CCHHHHHHHHHHcCCCceec
Q 033623 2 DCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY--VDPNKVLKKVKSTGKRAEFW 57 (115)
Q Consensus 2 ~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~--~~~~~i~~~i~~~G~~~~~~ 57 (115)
.|+.-.-+++++|.+++.- +.+.|..+ .....|...+++.|+.....
T Consensus 36 ~CP~PvlktkkaL~~l~~G---------e~L~Vl~dd~~a~~dIp~~~~~~G~~v~~~ 84 (97)
T 1je3_A 36 PCPYPAVATLEAMPQLKKG---------EILEVVSDCPQSINNIPLDARNHGYTVLDI 84 (97)
T ss_dssp SSSSSTHHHHHHTTTCCSS---------CEEEEEEBCSSSSCHHHHHHHHHTCSEEEE
T ss_pred CCCHHHHHHHHHHHcCCCC---------CEEEEEECCcchHHHHHHHHHHCCCEEEEE
Confidence 5777788899999887422 23333322 44567888889999987653
No 77
>1pqx_A Conserved hypothetical protein; ZR18,structure, autostructure,spins,autoassign, northeast structural genomics consortium; NMR {Staphylococcus aureus subsp} SCOP: d.267.1.1 PDB: 2ffm_A
Probab=30.78 E-value=23 Score=19.82 Aligned_cols=37 Identities=24% Similarity=0.247 Sum_probs=26.1
Q ss_pred HHHHhCCCCceEEEEeccCCEEEEEe--eCCHHHHHHHHHH
Q 033623 11 RNAVSSIRGAKSVEVNRKQSRVTVTG--YVDPNKVLKKVKS 49 (115)
Q Consensus 11 ~~~l~~~~gv~~~~v~~~~~~v~v~~--~~~~~~i~~~i~~ 49 (115)
-+.|-.++||.+|-+. .+-++|+- +.+++.|...|..
T Consensus 42 A~~LF~i~gVk~Vf~g--~dFITVtK~~~~dW~~ikp~V~~ 80 (91)
T 1pqx_A 42 INDILKVEGVKSIFHV--MDFISVDKENDANWETVLPKVEA 80 (91)
T ss_dssp HHHHHHSTTEEEEEEE--TTEEEEEECTTSCSTTTHHHHHH
T ss_pred HHHhhCCCCeeEEEEe--CCEEEEecCCCCCHHHHHHHHHH
Confidence 3456679999887665 67788873 3777777777654
No 78
>4dx5_A Acriflavine resistance protein B; multidrug efflux protein, membrane protein, transpor; HET: LMT OCT D10 HEX D12 MIY C14 LMU DD9 UND GOL; 1.90A {Escherichia coli} PDB: 2hrt_A* 2gif_A* 4dx7_A* 4dx6_A* 3noc_A* 1oy6_A* 1oy9_A* 1oyd_A* 1oy8_A* 1oye_A 2rdd_A* 2w1b_A* 3d9b_A 2i6w_A* 3nog_A* 1t9x_A* 1t9t_A* 1t9v_A* 1t9w_A* 1t9u_A* ...
Probab=30.58 E-value=1.1e+02 Score=24.54 Aligned_cols=43 Identities=19% Similarity=0.307 Sum_probs=32.0
Q ss_pred HHHHHHHhCCCCceEEEEeccCCEEEEEe--------eCCHHHHHHHHHHc
Q 033623 8 RKVRNAVSSIRGAKSVEVNRKQSRVTVTG--------YVDPNKVLKKVKST 50 (115)
Q Consensus 8 ~~v~~~l~~~~gv~~~~v~~~~~~v~v~~--------~~~~~~i~~~i~~~ 50 (115)
..+++.|++++||.++++......+.|.- .++..+|.++|+..
T Consensus 160 ~~i~~~l~~i~gv~~v~~~g~~~~i~i~~d~~~l~~~glt~~~v~~~l~~~ 210 (1057)
T 4dx5_A 160 ANMKDAISRTSGVGDVQLFGSQYAMRIWMNPNELNKFQLTPVDVITAIKAQ 210 (1057)
T ss_dssp HHTHHHHHTSTTEEEEEESSCCEEEEEEECHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCceEEEecCCcEEEEEEeCHHHHHHcCCCHHHHHHHHHHh
Confidence 57889999999999999865523344542 27888899999763
No 79
>1yj7_A ESCJ; mixed alpha/beta, extended linker, protein transport; 1.80A {Escherichia coli}
Probab=30.51 E-value=45 Score=20.82 Aligned_cols=22 Identities=23% Similarity=0.359 Sum_probs=17.9
Q ss_pred HHHHHHHHhCCCCceEEEEecc
Q 033623 7 ERKVRNAVSSIRGAKSVEVNRK 28 (115)
Q Consensus 7 ~~~v~~~l~~~~gv~~~~v~~~ 28 (115)
...+++.|..++||.+++|.+.
T Consensus 92 egELartI~~i~~V~~ARVhl~ 113 (171)
T 1yj7_A 92 EQDIERLLSKIPGVIDCSVSLN 113 (171)
T ss_dssp HHHHHHHHTTSTTEEEEEEEEE
T ss_pred HHHHHHHHHcCCCeeEEEEEEE
Confidence 3457889999999999988763
No 80
>3gzb_A Putative snoal-like polyketide cyclase; YP_001182657.1, STRU genomics, joint center for structural genomics, JCSG; HET: MSE; 1.44A {Shewanella putrefaciens} PDB: 3lza_A*
Probab=29.55 E-value=58 Score=19.73 Aligned_cols=32 Identities=19% Similarity=0.230 Sum_probs=23.8
Q ss_pred CCCCceEEEEeccCCEEEEEee-CCHHHHHHHH
Q 033623 16 SIRGAKSVEVNRKQSRVTVTGY-VDPNKVLKKV 47 (115)
Q Consensus 16 ~~~gv~~~~v~~~~~~v~v~~~-~~~~~i~~~i 47 (115)
.++||..++.|+.+.+++-.-+ .|-..+.+.|
T Consensus 119 aiPGVTtlklDm~~~Rv~eh~DlmDyqTm~DQl 151 (154)
T 3gzb_A 119 AIPAVTSLKLDMLNRRVTEHVDLIDYQTMSDQL 151 (154)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEEECHHHHHHHH
T ss_pred ecCceEEEeecCCccchhhhHhHHhHHHHHHHh
Confidence 4689999999999999986544 5665555544
No 81
>3vow_A Probable DNA DC->DU-editing enzyme apobec-3C; antiviral deffense, HOST-virus interaction, metal- HIV-1 VIF, BET, single domain, sivagm, hydrolase; 2.15A {Homo sapiens} PDB: 3vm8_A
Probab=28.61 E-value=33 Score=21.95 Aligned_cols=51 Identities=18% Similarity=0.357 Sum_probs=34.7
Q ss_pred CcHhHHHHHHHHHhCCCCceEEEEeccCCEEEEEe----e-CC--HHHHHHHHHHcCCCceecCCCCC
Q 033623 2 DCDGCERKVRNAVSSIRGAKSVEVNRKQSRVTVTG----Y-VD--PNKVLKKVKSTGKRAEFWPYVPY 62 (115)
Q Consensus 2 ~C~~C~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~----~-~~--~~~i~~~i~~~G~~~~~~~~~~~ 62 (115)
-|..|+.+|-+-|.+.+.|. ++|-. . -+ -.+=+..|.++|-.+.+..+.++
T Consensus 96 PC~~CA~~va~FL~~~~~v~----------L~If~aRLY~~~~~~~q~gLr~L~~~G~~v~iM~~~eF 153 (190)
T 3vow_A 96 PCPDCAGEVAEFLARHSNVN----------LTIFTARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDF 153 (190)
T ss_dssp CCHHHHHHHHHHHHHCTTEE----------EEEEEEECTTTTSHHHHHHHHHHHHHTCEEEECCHHHH
T ss_pred chHHHHHHHHHHHHhCCCeE----------EEEEEEecccccCchHHHHHHHHHHCCCcEEEeChHHH
Confidence 39999999999999887763 33321 1 12 23445667788999888876443
No 82
>4g1a_A AQ-C16C19 peptide; helical bundles, metallopeptide complexes, polynuclear metal CD(II), SELF-assembly, metal binding protein; 1.85A {Synthetic construct}
Probab=28.26 E-value=18 Score=15.56 Aligned_cols=10 Identities=40% Similarity=1.122 Sum_probs=7.5
Q ss_pred cHhHHHHHHH
Q 033623 3 CDGCERKVRN 12 (115)
Q Consensus 3 C~~C~~~v~~ 12 (115)
|..|..+|..
T Consensus 16 caaceqkiaa 25 (32)
T 4g1a_A 16 CAACEQKIAA 25 (32)
T ss_dssp TSSHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7888888754
No 83
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=27.99 E-value=27 Score=20.67 Aligned_cols=16 Identities=25% Similarity=0.383 Sum_probs=9.3
Q ss_pred EEEEeccCCEEEEEee
Q 033623 22 SVEVNRKQSRVTVTGY 37 (115)
Q Consensus 22 ~~~v~~~~~~v~v~~~ 37 (115)
.+++....+.|+++|.
T Consensus 78 ~i~V~V~~g~VtLsG~ 93 (132)
T 2kgs_A 78 DFGLKVERDTVTLTGT 93 (132)
T ss_dssp TCEEEEEETEEEEECE
T ss_pred ceEEEEECCEEEEEEE
Confidence 3445555666666665
No 84
>3vpj_E TSE1-specific immunity protein; hydrolase-hydrolase inhibitor complex; 2.50A {Pseudomonas aeruginosa}
Probab=27.10 E-value=14 Score=22.30 Aligned_cols=14 Identities=50% Similarity=0.997 Sum_probs=9.7
Q ss_pred ccccccCCccCCCC
Q 033623 97 DERLTTLFSDENPN 110 (115)
Q Consensus 97 ~~~~~~~FsDenp~ 110 (115)
+.+...|||.|+||
T Consensus 63 dehvrvmfsnedpn 76 (192)
T 3vpj_E 63 DEHVRVMFSNEDPN 76 (192)
T ss_dssp CSSEEEEEECCCSS
T ss_pred cceEEEEeccCCCC
Confidence 34556788877776
No 85
>1b64_A Elongation factor 1-beta; guanine nucleotide exchange factor, G-protein, translation elongation; NMR {Homo sapiens} SCOP: d.58.12.1
Probab=25.04 E-value=62 Score=18.01 Aligned_cols=21 Identities=10% Similarity=0.302 Sum_probs=17.0
Q ss_pred HHHHHHHHhCCCC-ceEEEEec
Q 033623 7 ERKVRNAVSSIRG-AKSVEVNR 27 (115)
Q Consensus 7 ~~~v~~~l~~~~g-v~~~~v~~ 27 (115)
...++..+++++| |+++++..
T Consensus 66 tD~lee~i~~~ed~VqSvdI~~ 87 (91)
T 1b64_A 66 TDMLEEQITAFEDYVQSMDVAA 87 (91)
T ss_dssp HHHHHHHHTTCTTTEEEEEESC
T ss_pred hHHHHHHHHhccCceeEEEEEE
Confidence 4568888999999 99988753
No 86
>1kaf_A Transcription regulatory protein MOTA; escherichia coli, X-RAY crystallography, protein-DNA interactions, structural genomics; 1.60A {Enterobacteria phage T4} SCOP: d.199.1.1
Probab=25.03 E-value=1.1e+02 Score=17.72 Aligned_cols=40 Identities=18% Similarity=0.357 Sum_probs=28.1
Q ss_pred CCceEEEEeccCCEEEEEeeCCHHHHHHHHHHcCCCceecC
Q 033623 18 RGAKSVEVNRKQSRVTVTGYVDPNKVLKKVKSTGKRAEFWP 58 (115)
Q Consensus 18 ~gv~~~~v~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~~~~ 58 (115)
.|+...++. .++...|-+.--.+++++.+.+.|..+..-+
T Consensus 44 ~GiRqfEi~-n~G~fRI~gYk~se~~~~~f~slGm~~K~~~ 83 (108)
T 1kaf_A 44 NGIRNFEIN-NNGNMRIFGYKMMEHHIQKFTDIGMSCKIAK 83 (108)
T ss_dssp TTEEEEEEC-TTSEEEEEEESCCHHHHHHHHTTTCEEEECT
T ss_pred CceeEEEEe-cCCcEEEEEecCCHHHHHHHHhcCceEEEcC
Confidence 566666653 5566777776677888999999997665444
No 87
>4e6k_G BFD, bacterioferritin-associated ferredoxin; protein complex, iron storage, iron binding, iron mobilizati ferritin, iron homeostasis; HET: HEM; 2.00A {Pseudomonas aeruginosa}
Probab=24.73 E-value=33 Score=18.25 Aligned_cols=16 Identities=19% Similarity=0.563 Sum_probs=12.5
Q ss_pred CCcHhHHHHHHHHHhC
Q 033623 1 MDCDGCERKVRNAVSS 16 (115)
Q Consensus 1 m~C~~C~~~v~~~l~~ 16 (115)
+.|..|...|++.|..
T Consensus 36 t~CG~C~~~i~~il~~ 51 (73)
T 4e6k_G 36 TQCGKCASLAKQVVRE 51 (73)
T ss_dssp SSSCTTHHHHHHHHHH
T ss_pred CCCCchHHHHHHHHHH
Confidence 3588899888888764
No 88
>2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=24.22 E-value=1.7e+02 Score=19.68 Aligned_cols=52 Identities=15% Similarity=0.360 Sum_probs=35.6
Q ss_pred HHHHHHHHhCCCCceEEEEeccCCEEEEEee-CCHHHHHHHHHHcCCCceecCC
Q 033623 7 ERKVRNAVSSIRGAKSVEVNRKQSRVTVTGY-VDPNKVLKKVKSTGKRAEFWPY 59 (115)
Q Consensus 7 ~~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~-~~~~~i~~~i~~~G~~~~~~~~ 59 (115)
...+++.+...+||.-..+| ..+.++|.|+ ...+++.+.++..|..+..++.
T Consensus 137 ~~~v~~~l~~~~~v~iA~~N-sp~~~visG~~~~l~~~~~~l~~~g~~~~~L~v 189 (305)
T 2cuy_A 137 LEEIQKALEGLEGVEIANLN-APEQTVISGRRQAVEEAAERLKERRARVVFLPV 189 (305)
T ss_dssp HHHHHHHHTTCSSEEEEEEE-ETTEEEEEEEHHHHHHHHHHHHHTTCEEEECSC
T ss_pred HHHHHHHHhhcCCeEEEEEe-cCCcEEEEcCHHHHHHHHHHHHhCCceEEECCC
Confidence 35677777777676555566 4455667776 5667788888988887766653
No 89
>3fpn_B Geobacillus stearothermophilus UVRB interaction domain; UVRA, nucleotide excision repair, DNA repair, DNA binding protein; 1.80A {Geobacillus stearothermophilus}
Probab=24.17 E-value=66 Score=18.19 Aligned_cols=26 Identities=15% Similarity=0.303 Sum_probs=19.5
Q ss_pred CCEEEEE-e-eCCHHHHHHHHHHcCCCc
Q 033623 29 QSRVTVT-G-YVDPNKVLKKVKSTGKRA 54 (115)
Q Consensus 29 ~~~v~v~-~-~~~~~~i~~~i~~~G~~~ 54 (115)
...+.+. | .++.+++.+.|...||.-
T Consensus 12 ~~~l~l~~G~~i~~~~l~~~L~~~GY~r 39 (106)
T 3fpn_B 12 ELVVSLRVGMEIERNALLRRLVDIQYDR 39 (106)
T ss_dssp -CCEEEETTCBCCHHHHHHHHHHTTCEE
T ss_pred hCCeEEECCCCcCHHHHHHHHHHcCCEE
Confidence 3445554 4 389999999999999964
No 90
>1jg5_A GTP cyclohydrolase I feedback regulatory protein; alpha/beta structure, beta sheet, protein binding; 2.60A {Rattus norvegicus} SCOP: d.205.1.1 PDB: 1is8_K* 1is7_K* 1wpl_K*
Probab=23.57 E-value=72 Score=17.38 Aligned_cols=26 Identities=23% Similarity=0.130 Sum_probs=19.8
Q ss_pred EEEeeCCHHHHHHHHHHcCCCceecC
Q 033623 33 TVTGYVDPNKVLKKVKSTGKRAEFWP 58 (115)
Q Consensus 33 ~v~~~~~~~~i~~~i~~~G~~~~~~~ 58 (115)
+...+-.+..++.+|++.||++.-..
T Consensus 45 ey~v~dpPr~VLnKLE~~G~rVvsmt 70 (83)
T 1jg5_A 45 EYYVNDPPRIVLDKLECRGFRVLSMT 70 (83)
T ss_dssp EEEESSCHHHHHHHHHHTTCEEEEEE
T ss_pred EEEcCCChHHHHHHHhccCeEEEEEe
Confidence 33344688899999999999876544
No 91
>1q2j_A MU-conotoxin SMIIIA; HET: PCA; NMR {Synthetic} SCOP: j.30.1.1 PDB: 2yen_A*
Probab=21.64 E-value=27 Score=14.57 Aligned_cols=6 Identities=33% Similarity=0.778 Sum_probs=4.1
Q ss_pred CCCCcc
Q 033623 108 NPNACS 113 (115)
Q Consensus 108 np~aCs 113 (115)
-||.||
T Consensus 6 ~pngCs 11 (26)
T 1q2j_A 6 GRRGCS 11 (26)
T ss_dssp SSSCCC
T ss_pred CCCccc
Confidence 377776
No 92
>2zzt_A Putative uncharacterized protein; cation diffusion facilitator (CDF), transporter, zinc, membrane protein, cytosolic domain; 2.84A {Thermotoga maritima}
Probab=21.35 E-value=74 Score=17.76 Aligned_cols=17 Identities=0% Similarity=-0.011 Sum_probs=14.0
Q ss_pred HHHHHHHHhCCCCceEE
Q 033623 7 ERKVRNAVSSIRGAKSV 23 (115)
Q Consensus 7 ~~~v~~~l~~~~gv~~~ 23 (115)
..+|++.|.+.+||.++
T Consensus 12 ~~~I~~~l~~~~gV~~v 28 (107)
T 2zzt_A 12 YDDIFAVLERFPNVHNP 28 (107)
T ss_dssp HHHHHHHHTTCSSCEEE
T ss_pred HHHHHHHHHcCCCcccc
Confidence 46789999999998765
No 93
>1d1r_A Hypothetical 11.4 KD protein YCIH in PYRF-OSMB intergenic region; alpha-beta plait, open-faced beta sandwich, ferredoxin-like fold; NMR {Escherichia coli} SCOP: d.64.1.1
Probab=21.32 E-value=45 Score=19.52 Aligned_cols=37 Identities=14% Similarity=0.184 Sum_probs=17.8
Q ss_pred HHHhCCCCceEEEEecc-C--CEEEEE-e----eCCHHHHHHHHH
Q 033623 12 NAVSSIRGAKSVEVNRK-Q--SRVTVT-G----YVDPNKVLKKVK 48 (115)
Q Consensus 12 ~~l~~~~gv~~~~v~~~-~--~~v~v~-~----~~~~~~i~~~i~ 48 (115)
..+.+-.+...+.+.-. . ..||+. + ..+..+|.+.|.
T Consensus 24 ~~~p~~~~~V~I~~er~gR~GK~VT~V~Gl~~~~~dlk~laK~LK 68 (116)
T 1d1r_A 24 PVRPKGDGVVRIQRQTSGRKGKGVCLITGVDLDDAELTKLAAELK 68 (116)
T ss_dssp ----CCCCEEEEEECCCSSSSCCCEEEECCCSCHHHHHHHHHHHT
T ss_pred cCCCCCCCeEEEEEEeCCCCCCeEEEEeCCcCchhhHHHHHHHHH
Confidence 45555566666665521 1 346643 3 245666777775
No 94
>1ytb_A Protein (tata binding protein (TBP)); protein-DNA complex, transcription/DNA complex; HET: DNA; 1.80A {Saccharomyces cerevisiae} SCOP: d.129.1.1 d.129.1.1 PDB: 1ngm_A* 1tba_B 1nh2_A* 1ytf_A* 1tbp_A 1qna_A* 1qn3_A* 1qn5_A* 1qn6_A* 1qn7_A* 1qn8_A* 1qn9_A* 1qn4_A* 1qnb_A* 1qnc_A* 1qne_A* 1vok_A 1vol_B* 1vto_A* 1vtl_E* ...
Probab=21.28 E-value=1.2e+02 Score=18.96 Aligned_cols=25 Identities=8% Similarity=0.218 Sum_probs=19.3
Q ss_pred EeccCCEEEEEeeCCHHHHHHHHHH
Q 033623 25 VNRKQSRVTVTGYVDPNKVLKKVKS 49 (115)
Q Consensus 25 v~~~~~~v~v~~~~~~~~i~~~i~~ 49 (115)
.=+.++++.|+|.-..+++.++++.
T Consensus 145 lIF~SGkivitGak~~~~~~~a~~~ 169 (180)
T 1ytb_A 145 LIFVSGKIVLTGAKQREEIYQAFEA 169 (180)
T ss_dssp EECTTSEEEEEEESSHHHHHHHHHH
T ss_pred EEecCCeEEEEecCCHHHHHHHHHH
Confidence 3468999999998788887777654
No 95
>2e9h_A EIF-5, eukaryotic translation initiation factor 5; zinc binding, C4 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.11 E-value=1.6e+02 Score=18.20 Aligned_cols=28 Identities=21% Similarity=0.309 Sum_probs=23.4
Q ss_pred EEEeccCCEEEEEeeCCHHHHHHHHHHc
Q 033623 23 VEVNRKQSRVTVTGYVDPNKVLKKVKST 50 (115)
Q Consensus 23 ~~v~~~~~~v~v~~~~~~~~i~~~i~~~ 50 (115)
.++|..++++.|.|..+..+|...|++-
T Consensus 72 g~id~~~~rlii~G~~~~~~i~~~L~~y 99 (157)
T 2e9h_A 72 TQFDVKNDRYIVNGSHEANKLQDMLDGF 99 (157)
T ss_dssp EEEETTTTEEEEEBCCCHHHHHHHHHHH
T ss_pred eeecCCCCEEEEEeeeCHHHHHHHHHHH
Confidence 5567679999999999999998888764
No 96
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=21.11 E-value=97 Score=23.46 Aligned_cols=31 Identities=13% Similarity=0.194 Sum_probs=25.7
Q ss_pred EEEeccCCEEEEEeeCCHHHHHHHHHHcCCC
Q 033623 23 VEVNRKQSRVTVTGYVDPNKVLKKVKSTGKR 53 (115)
Q Consensus 23 ~~v~~~~~~v~v~~~~~~~~i~~~i~~~G~~ 53 (115)
+++|..+..++|..-+...+|.+.|++.|+.
T Consensus 267 leiD~~~~~atVeaGv~~~~L~~~L~~~Gl~ 297 (658)
T 4bby_A 267 LWVDENNLTAHVEAGITGQELERQLKESGYC 297 (658)
T ss_dssp EEEETTTTEEEEETTCBHHHHHHHHHHHTEE
T ss_pred EEEcCCCCEEEEecCchHHHHHHHHHHcCCc
Confidence 4677788888888778899999999999865
No 97
>3tzy_A Polyketide synthase PKS13; acyltransferase, long fatty acid chain transferase, acyl CAR protein, transferase; HET: PLM; 2.20A {Mycobacterium tuberculosis} PDB: 3tzw_A 3tzx_A* 3tzz_A*
Probab=20.10 E-value=2.6e+02 Score=20.37 Aligned_cols=51 Identities=14% Similarity=0.230 Sum_probs=36.0
Q ss_pred HHHHHHHhCCCCceEEEEeccCCEEEEEee-CCHHHHHHHHHHcCCCceecCC
Q 033623 8 RKVRNAVSSIRGAKSVEVNRKQSRVTVTGY-VDPNKVLKKVKSTGKRAEFWPY 59 (115)
Q Consensus 8 ~~v~~~l~~~~gv~~~~v~~~~~~v~v~~~-~~~~~i~~~i~~~G~~~~~~~~ 59 (115)
..++..+....+|.-..+|- .+.++|.|+ ...+++.+.++..|..+..+..
T Consensus 282 ~~v~~~~~~~~~v~iA~~Ns-P~~~ViSG~~~ai~~~~~~l~~~g~~~~~L~V 333 (491)
T 3tzy_A 282 DEIREVFSDFPDLEVCVYAA-PTQTVIGGPPEQVDAILARAEAEGKFARKFAT 333 (491)
T ss_dssp HHHHHHGGGCTTCEEEEEEE-TTEEEEEECHHHHHHHHHHHHHHTCCEEEESC
T ss_pred HHHHhhhcccccceeeeecC-CCcEEeCCcHHHHHHHHHHHHhcCceEEeccc
Confidence 45566666667777677774 455677776 5567788888999988877654
Done!