Citrus Sinensis ID: 033624

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-----
Protein Sequence
MASQVSDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN
Secondary Structure (PSIPRED)
ccccccccccccccccccEEEEEccccHHHHHHHHHHHHHcccEEEEcccHHHHHHHHHHHHcccccccccccEEEEEEccccccHHHHHHHHHHHHHHcccccEEEEccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHccccHHHHcccEEEEcccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHccccccccccEEEEEEccccccHHHHHHHHHHHHHHHccccEEEEccccccc
Coil and Loop (DISEMBL)
masqvsdhlepwhdlnEKVVMVTgassglgrEFCLDLAKAGCRIVAAARRVDRLKSLCdeinkpgmvgspdSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVnnagirgn
Flexible Loop (DISEMBL)
masqvsdhlepwhdlnEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCdeinkpgmvgspdsVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN
Low Complexity Region (SEG)
MASQVSDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN
Disordered region (IsUnstruct)
***********WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNA*****
Disordered Region (DISOPRED)
************HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG*
Disordered Region (DISEMBL)
********LEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN
Disordered Region (DISPRO)
*****SDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI*GN
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASQVSDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	115	2.2.26 [Sep-21-2011]
Q49WS9	246	Uncharacterized oxidoredu	yes	no	0.739	0.345	0.336	3e-10
P25970	253	Uncharacterized oxidoredu	yes	no	0.817	0.371	0.411	8e-10
P40288	261	Glucose 1-dehydrogenase O	yes	no	0.817	0.360	0.349	2e-09
P25145	248	Uncharacterized oxidoredu	yes	no	0.808	0.375	0.366	3e-09
Q9Y394	339	Dehydrogenase/reductase S	yes	no	0.852	0.289	0.362	7e-09
Q7Q732	317	Dehydrogenase/reductase S	no	no	0.826	0.299	0.387	1e-08
P39482	261	Glucose 1-dehydrogenase 1	yes	no	0.817	0.360	0.330	2e-08
Q92EK7	248	Uncharacterized oxidoredu	yes	no	0.808	0.375	0.356	3e-08
Q21929	251	Probable L-xylulose reduc	no	no	0.782	0.358	0.361	4e-08
Q9CXR1	338	Dehydrogenase/reductase S	yes	no	0.843	0.286	0.346	4e-08

>sp|Q49WS9|Y1627_STAS1 Uncharacterized oxidoreductase SSP1627 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1627 PE=3 SV=1

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 22/107 (20%)

Query: 12  WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEIN------KPG 65
            +++ +KVV++TGASSG+G E    L++ G ++V  ARR+DRL+ +  ++       K  
Sbjct: 1   MNNVKDKVVVITGASSGIGEETVNLLSENGAKLVLGARRLDRLEKIQQKVGHDSVSIKKT 60

Query: 66  MVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            V  PD V A+                ++ A+  FGR+D L+NNAG+
Sbjct: 61  DVTKPDEVNAL----------------IETAYNDFGRIDVLINNAGL 91

Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) (taxid: 342451)
EC: 1EC: .EC: -EC: .EC: -EC: .EC: -

>sp|P25970|Y5909_MYXXD Uncharacterized oxidoreductase MXAN_5909 OS=Myxococcus xanthus (strain DK 1622) GN=MXAN_5909 PE=3 SV=2

 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 58/102 (56%), Gaps = 8/102 (7%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           +++ +  +VTGASSGLGR   L LA+ G R+ AA RR+ +L++L DE    G+   P   
Sbjct: 3   EMSYRTALVTGASSGLGRGLALWLARRGVRVFAAGRRLPQLQALRDEAQAAGVTVEP--- 59

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
               VELDV    AT+E       EA G +D +V NAG+ G 
Sbjct: 60  ----VELDVTKADATLERIRALDAEA-GGLDLVVANAGVGGT 96

Myxococcus xanthus (strain DK 1622) (taxid: 246197)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P40288|DHG_BACME Glucose 1-dehydrogenase OS=Bacillus megaterium PE=1 SV=1

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 9/103 (8%)

Query: 12  WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKPGMVGSP 70
           + DL  KVV++TG+S+GLG+   +  A    ++V   R + D   S+ +EI K G     
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG---- 57

Query: 71  DSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIR 113
               A+AV+ DV  +   I + VQ A + FG++D ++NNAG+ 
Sbjct: 58  ---EAIAVKGDVTVESDVINL-VQSAIKEFGKLDVMINNAGLE 96

Bacillus megaterium (taxid: 1404)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|P25145|Y432_LISMO Uncharacterized oxidoreductase Lmo0432 OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=lmo0432 PE=3 SV=2

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 8/101 (7%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           +  KV+++TGASSG+G+   L LA+ G ++V AARRV++L+ +   I         +S  
Sbjct: 3   IKNKVIIITGASSGIGKATALLLAEKGAKLVLAARRVEKLEKIVQTIKA-------NSGE 55

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
           A+  + DV       ++ V+ A E +G+VDA+  NAGI  N
Sbjct: 56  AIFAKTDVTKREDNKKL-VELAIERYGKVDAIFLNAGIMPN 95

Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) (taxid: 169963)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q9Y394|DHRS7_HUMAN Dehydrogenase/reductase SDR family member 7 OS=Homo sapiens GN=DHRS7 PE=1 SV=1

 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 4/102 (3%)

Query: 11  PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSP 70
           P  +L + VV VTGASSG+G E    L+K G  +V +ARRV  L+ +     + G +   
Sbjct: 44  PEWELTDMVVWVTGASSGIGEELAYQLSKLGVSLVLSARRVHELERVKRRCLENGNLKEK 103

Query: 71  DSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           D    + + LD+  D  + E + +   + FGR+D LVNN G+
Sbjct: 104 D---ILVLPLDL-TDTGSHEAATKAVLQEFGRIDILVNNGGM 141

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q7Q732|DHRS7_ANOGA Dehydrogenase/reductase SDR family protein 7-like OS=Anopheles gambiae GN=AGAP005532 PE=3 SV=3

 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 3/98 (3%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           LN KVV++TGASSGLG         AGC++V AARR D L+ +  ++ +  +  +  +  
Sbjct: 46  LNGKVVLITGASSGLGEALAHSFFLAGCKVVLAARRKDELERVRKDLLE--LHATVPTHP 103

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            + + LD+ +D  +I   VQ   E  G +D LVNN GI
Sbjct: 104 PIILPLDL-SDLNSIGGKVQSVLEIHGAIDILVNNGGI 140

Putative oxidoreductase.

Anopheles gambiae (taxid: 7165)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|P39482|DHG1_BACME Glucose 1-dehydrogenase 1 OS=Bacillus megaterium GN=gdhI PE=2 SV=1

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 9/103 (8%)

Query: 12  WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKPGMVGSP 70
           + DL  KVV++TG+S+GLG+   +  A    ++V   R + +   S+ +EI K G     
Sbjct: 2   YKDLEGKVVVITGSSTGLGKAMAIRFATEKAKVVVNYRSKEEEANSVLEEIKKVGG---- 57

Query: 71  DSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIR 113
               A+AV+ DV  +   I + VQ + + FG++D ++NNAG+ 
Sbjct: 58  ---EAIAVKGDVTVESDVINL-VQSSIKEFGKLDVMINNAGME 96

May play some role in spore germination.

Bacillus megaterium (taxid: 1404)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|Q92EK7|Y452_LISIN Uncharacterized oxidoreductase Lin0452 OS=Listeria innocua serovar 6a (strain CLIP 11262) GN=lin0452 PE=3 SV=1

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 8/101 (7%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           +  KV+++TGASSG+G    + LA+ G ++V AARRV++L+ +   I          S  
Sbjct: 3   IKNKVIIITGASSGIGEATAILLAEKGAKLVLAARRVEKLEKIVQTIKA-------SSGE 55

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
           A+  + DV       ++ V+ A E +G+VDA+  NAGI  N
Sbjct: 56  AIFAKTDVTKREDNKKL-VELAIERYGKVDAIFLNAGIMPN 95

Listeria innocua serovar 6a (strain CLIP 11262) (taxid: 272626)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q21929|DCXR_CAEEL Probable L-xylulose reductase OS=Caenorhabditis elegans GN=dhs-21 PE=3 SV=2

 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 15/105 (14%)

Query: 13  HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDS 72
           +D  +K ++VTGAS G+G+E CL LAKAG +++A AR    L SL  E           S
Sbjct: 5   YDFTDKRILVTGASQGIGKEICLSLAKAGAQVIAFARNEANLLSLVKETT---------S 55

Query: 73  VRAVAVEL--DVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
           +R   + +  DV A+   +   +   +   G    LVNNAGI  N
Sbjct: 56  LRYTIIPIVGDVSANEEVLFKLIVPHFPIHG----LVNNAGIATN 96

Catalyzes the NADPH-dependent reduction of L-xylulose, D-xylulose, D-fructose, and L-sorbose, with the highest affinity for L-xylulose.

Caenorhabditis elegans (taxid: 6239)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

>sp|Q9CXR1|DHRS7_MOUSE Dehydrogenase/reductase SDR family member 7 OS=Mus musculus GN=Dhrs7 PE=2 SV=2

 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%)

Query: 11  PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSP 70
           P  +L + VV VTGASSG+G E    L+K G  +V +ARR   L+ +     + G +   
Sbjct: 44  PEWELTDMVVWVTGASSGIGEELAFQLSKLGVSLVLSARRAQELERVKRRCLENGNLKEK 103

Query: 71  DSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           D    + + LD+  D ++ E + +   + FG++D LVNN G
Sbjct: 104 D---ILVLPLDL-TDTSSHEAATKAVLQEFGKIDILVNNGG 140

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	115
147788942	286	hypothetical protein VITISV_036158 [Viti	1.0	0.402	0.747	6e-43
359481418	296	PREDICTED: 3-oxoacyl-[acyl-carrier-prote	1.0	0.388	0.747	1e-42
255552543	285	2,4-dienoyl-CoA reductase, putative [Ric	0.965	0.389	0.745	6e-41
225440103	286	PREDICTED: 3-oxoacyl-[acyl-carrier-prote	1.0	0.402	0.722	7e-41
297741657	271	unnamed protein product [Vitis vinifera]	1.0	0.424	0.722	8e-41
147802883	316	hypothetical protein VITISV_033145 [Viti	1.0	0.363	0.722	9e-41
356500313	282	PREDICTED: 3-oxoacyl-[acyl-carrier-prote	1.0	0.407	0.704	3e-39
118484228	290	unknown [Populus trichocarpa]	1.0	0.396	0.666	1e-37
224139712	290	predicted protein [Populus trichocarpa]	1.0	0.396	0.658	1e-36
388521159	273	unknown [Medicago truncatula]	0.895	0.377	0.703	1e-36

>gi|147788942|emb|CAN64848.1| hypothetical protein VITISV_036158 [Vitis vinifera]

 Score =  177 bits (449), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 89/119 (74%), Positives = 100/119 (84%), Gaps = 4/119 (3%)

Query: 1   MASQVSDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE 60
           MASQV++HLEPW DL  KVVMVTGASSGLG EFCL+LAKAGC+IVAAARRVDRLKSLCDE
Sbjct: 1   MASQVANHLEPWQDLEGKVVMVTGASSGLGSEFCLNLAKAGCKIVAAARRVDRLKSLCDE 60

Query: 61  INKPGMVGSPDS----VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
           IN       P +    +RAVAVELDV +DG++I  SVQKAWEAFGR+DAL+NNAGIRGN
Sbjct: 61  INNLTHSNLPPNDDPPLRAVAVELDVTSDGSSIGASVQKAWEAFGRIDALLNNAGIRGN 119

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359481418|ref|XP_002282766.2| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] reductase FabG [Vitis vinifera]

 Score =  177 bits (448), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 89/119 (74%), Positives = 100/119 (84%), Gaps = 4/119 (3%)

Query: 1   MASQVSDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE 60
           MASQV++HLEPW DL  KVVMVTGASSGLG EFCL+LAKAGC+IVAAARRVDRLKSLCDE
Sbjct: 1   MASQVANHLEPWQDLEGKVVMVTGASSGLGSEFCLNLAKAGCKIVAAARRVDRLKSLCDE 60

Query: 61  INKPGMVGSPDS----VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
           IN       P +    +RAVAVELDV +DG++I  SVQKAWEAFGR+DAL+NNAGIRGN
Sbjct: 61  INNLTHSNLPPNADPPLRAVAVELDVTSDGSSIGASVQKAWEAFGRIDALLNNAGIRGN 119

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class: N/A

Phylum: Streptophyta

>gi|255552543|ref|XP_002517315.1| 2,4-dienoyl-CoA reductase, putative [Ricinus communis] gi|223543578|gb|EEF45108.1| 2,4-dienoyl-CoA reductase, putative [Ricinus communis]

 Score =  171 bits (432), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 85/114 (74%), Positives = 98/114 (85%), Gaps = 3/114 (2%)

Query: 3   SQVSDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEIN 62
           SQV   LEPW DL+ KVV+VTGAS+GLGREFCLDLAKAGC+I+AAARR+DRLKSLCDEIN
Sbjct: 7   SQVQTQLEPWCDLDNKVVLVTGASAGLGREFCLDLAKAGCKILAAARRIDRLKSLCDEIN 66

Query: 63  K-PGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
           + P   G+    RAVA+ELDVCADG TI+ SVQ AW+AFGR+DALVNNAG+RGN
Sbjct: 67  QLPNTPGA--GPRAVAIELDVCADGPTIDKSVQIAWDAFGRIDALVNNAGVRGN 118

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225440103|ref|XP_002282735.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] reductase FabG [Vitis vinifera]

 Score =  171 bits (432), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 86/119 (72%), Positives = 96/119 (80%), Gaps = 4/119 (3%)

Query: 1   MASQVSDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE 60
           MA QV+DHLEPW DL  KVV+VTGASSGLG EFCL+LAKAGC+IVAAARRVDRLKSLCDE
Sbjct: 1   MACQVADHLEPWQDLEGKVVLVTGASSGLGSEFCLNLAKAGCKIVAAARRVDRLKSLCDE 60

Query: 61  INKPGMVGSPDS----VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
           IN       P +    VRAV VELDV + G++I  SVQKAWEAFGR+D L+NNAGIRGN
Sbjct: 61  INNLTHSNLPPNADRPVRAVVVELDVTSGGSSISASVQKAWEAFGRIDVLLNNAGIRGN 119

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class: N/A

Phylum: Streptophyta

>gi|297741657|emb|CBI32789.3| unnamed protein product [Vitis vinifera]

 Score =  170 bits (431), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 86/119 (72%), Positives = 96/119 (80%), Gaps = 4/119 (3%)

Query: 1   MASQVSDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE 60
           MA QV+DHLEPW DL  KVV+VTGASSGLG EFCL+LAKAGC+IVAAARRVDRLKSLCDE
Sbjct: 1   MACQVADHLEPWQDLEGKVVLVTGASSGLGSEFCLNLAKAGCKIVAAARRVDRLKSLCDE 60

Query: 61  INKPGMVGSPDS----VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
           IN       P +    VRAV VELDV + G++I  SVQKAWEAFGR+D L+NNAGIRGN
Sbjct: 61  INNLTHSNLPPNADRPVRAVVVELDVTSGGSSISASVQKAWEAFGRIDVLLNNAGIRGN 119

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147802883|emb|CAN59905.1| hypothetical protein VITISV_033145 [Vitis vinifera]

 Score =  170 bits (431), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 86/119 (72%), Positives = 96/119 (80%), Gaps = 4/119 (3%)

Query: 1   MASQVSDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE 60
           MA QV+DHLEPW DL  KVV+VTGASSGLG EFCL+LAKAGC+IVAAARRVDRLKSLCDE
Sbjct: 1   MACQVADHLEPWQDLEGKVVLVTGASSGLGSEFCLNLAKAGCKIVAAARRVDRLKSLCDE 60

Query: 61  INKPGMVGSPDS----VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
           IN       P +    VRAV VELDV + G++I  SVQKAWEAFGR+D L+NNAGIRGN
Sbjct: 61  INNLTHSNLPPNADRPVRAVVVELDVTSGGSSISASVQKAWEAFGRIDVLLNNAGIRGN 119

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356500313|ref|XP_003518977.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] reductase FabG-like [Glycine max]

 Score =  165 bits (418), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 81/115 (70%), Positives = 92/115 (80%)

Query: 1   MASQVSDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE 60
           MA+Q+SD LEPWH L  KVVMVTGASSGLGR+FCLDL +AGCR+V AARRVDRL+SLCDE
Sbjct: 1   MATQLSDRLEPWHTLAGKVVMVTGASSGLGRDFCLDLGRAGCRVVVAARRVDRLESLCDE 60

Query: 61  INKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
           IN         S RAVAVELDV AD   ++  VQKAWEAFG +DAL+NNAG+RGN
Sbjct: 61  INSMAAGDGGRSRRAVAVELDVAADDPAVDKYVQKAWEAFGHIDALINNAGVRGN 115

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class: N/A

Phylum: Streptophyta

>gi|118484228|gb|ABK93994.1| unknown [Populus trichocarpa]

 Score =  159 bits (403), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 82/123 (66%), Positives = 96/123 (78%), Gaps = 8/123 (6%)

Query: 1   MASQVSDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE 60
           M+++V+  LEPW DL  KVV+VTGASSGLG++FCLDLAKAGCRI+AAARRVDRLKSLCDE
Sbjct: 1   MSTKVATQLEPWCDLRNKVVLVTGASSGLGKDFCLDLAKAGCRILAAARRVDRLKSLCDE 60

Query: 61  INKPGMVGSPDSV--------RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           IN+  +     S         RAVAVELDV ADG TI+  VQKAW+AFG +DALVNNAG+
Sbjct: 61  INQMSLSFPTSSSTAEVDIQPRAVAVELDVSADGNTIDKCVQKAWDAFGGIDALVNNAGV 120

Query: 113 RGN 115
           RG 
Sbjct: 121 RGT 123

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139712|ref|XP_002323240.1| predicted protein [Populus trichocarpa] gi|222867870|gb|EEF05001.1| predicted protein [Populus trichocarpa]

 Score =  157 bits (396), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 81/123 (65%), Positives = 95/123 (77%), Gaps = 8/123 (6%)

Query: 1   MASQVSDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE 60
           M+++ +  LEPW DL  KVV+VTGASSGLG++FCLDLAKAGCRI+AAARRVDRLKSLCDE
Sbjct: 1   MSTKGATQLEPWCDLRNKVVLVTGASSGLGKDFCLDLAKAGCRILAAARRVDRLKSLCDE 60

Query: 61  INKPGMVGSPDSV--------RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           IN+  +     S         RAVAVELDV ADG TI+  VQKAW+AFG +DALVNNAG+
Sbjct: 61  INQMSLSFPTSSSTAEVDIQPRAVAVELDVSADGNTIDKCVQKAWDAFGGIDALVNNAGV 120

Query: 113 RGN 115
           RG 
Sbjct: 121 RGT 123

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388521159|gb|AFK48641.1| unknown [Medicago truncatula]

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 76/108 (70%), Positives = 88/108 (81%), Gaps = 5/108 (4%)

Query: 8   HLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMV 67
            LEPWH L  KVV+VTGAS+G+GR+FCLDLA+AGC ++AAARRVDRL+SLCDEIN     
Sbjct: 4   QLEPWHHLAGKVVLVTGASAGIGRDFCLDLARAGCFVIAAARRVDRLQSLCDEIN----- 58

Query: 68  GSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
           G    +RAVAVELDV ADG  IE  VQKAWEAFG +DAL+NNAG+RGN
Sbjct: 59  GKDGRLRAVAVELDVAADGGAIEKYVQKAWEAFGHIDALINNAGVRGN 106

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	115
TAIR|locus:2100621	280	AT3G55290 [Arabidopsis thalian	0.947	0.389	0.628	5.8e-34
TAIR|locus:2031376	282	AT1G63380 [Arabidopsis thalian	0.930	0.379	0.648	9.5e-34
TAIR|locus:2100636	279	AT3G55310 [Arabidopsis thalian	0.930	0.383	0.630	1.2e-33
TAIR|locus:2075296	288	AT3G46170 [Arabidopsis thalian	0.939	0.375	0.616	1.8e-32
TAIR|locus:505006251	312	AT2G17845 [Arabidopsis thalian	0.860	0.317	0.647	4.2e-31
TIGR_CMR|GSU_1603	246	GSU_1603 "3-oxoacyl-(acyl-carr	0.756	0.353	0.442	2.7e-13
TAIR|locus:2159737	299	HSD4 "hydroxysteroid dehydroge	0.791	0.304	0.418	9.2e-12
TAIR|locus:2832482	299	HSD7 "hydroxysteroid dehydroge	0.791	0.304	0.418	9.2e-12
TIGR_CMR|BA_3989	246	BA_3989 "3-oxoacyl-(acyl-carri	0.782	0.365	0.414	3.9e-11
WB|WBGene00000993	311	dhs-30 [Caenorhabditis elegans	0.852	0.315	0.345	1.8e-10

TAIR|locus:2100621 AT3G55290 [Arabidopsis thaliana (taxid:3702)]

 Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
 Identities = 71/113 (62%), Positives = 91/113 (80%)

Query:     3 SQVSDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEIN 62
             +QV   LEPW +L +KVV+VTGASSG+GRE CLDLAKAGC+++AAARRVDRL SLC EIN
Sbjct:     6 TQVLKLLEPWCELKDKVVLVTGASSGIGREICLDLAKAGCQVIAAARRVDRLNSLCSEIN 65

Query:    63 KPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
                  G    ++A A+ELDV +D ATI+ +V++AW+ FG++DAL+NNAGIRGN
Sbjct:    66 SFSSTG----IQAAALELDVSSDAATIQKAVREAWDIFGKIDALINNAGIRGN 114

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005777 "peroxisome" evidence=IDA

TAIR|locus:2031376 AT1G63380 [Arabidopsis thaliana (taxid:3702)]

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 72/111 (64%), Positives = 88/111 (79%)

Query:     5 VSDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKP 64
             V   LEPW +L +KVV+VTGASSG+GRE CLDL KAGC+IVAAARRVDRL SLC EIN  
Sbjct:     7 VLKQLEPWCELKDKVVLVTGASSGIGREICLDLCKAGCKIVAAARRVDRLNSLCSEINSF 66

Query:    65 GMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
             G +G    V+AVA+ELDV ++  TI  +V++AWE FG++D L+NNAGIRGN
Sbjct:    67 GAIG----VQAVALELDVSSEADTIRKAVKEAWETFGKIDVLINNAGIRGN 113

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2100636 AT3G55310 [Arabidopsis thaliana (taxid:3702)]

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 70/111 (63%), Positives = 89/111 (80%)

Query:     5 VSDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKP 64
             V   LEPW +L +KVV+VTGASSG+GRE CLDLAKAGC+++AAARRVDRL SLC EIN  
Sbjct:     7 VLKQLEPWCELKDKVVLVTGASSGIGREICLDLAKAGCQVIAAARRVDRLNSLCSEINSF 66

Query:    65 GMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
                G    ++A A+ELDV +D ATI+ +V++AW+ FG++DAL+NNAGIRGN
Sbjct:    67 SSTG----IQAAALELDVSSDAATIQKAVREAWDIFGKIDALINNAGIRGN 113

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0016020 "membrane" evidence=IDA

TAIR|locus:2075296 AT3G46170 [Arabidopsis thaliana (taxid:3702)]

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 69/112 (61%), Positives = 85/112 (75%)

Query:     4 QVSDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINK 63
             +V   LEPW +L +KVV+VTGASSG+GRE CLDL KAGC+I+A ARRVDRL SLC EIN 
Sbjct:    15 EVLKQLEPWCELKDKVVLVTGASSGIGREICLDLGKAGCKIIAVARRVDRLNSLCSEINS 74

Query:    64 PGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
                 G    ++A A++LDV +D ATI+  VQ AW  FG++DAL+NNAGIRGN
Sbjct:    75 SSSTG----IQAAALKLDVTSDAATIQKVVQGAWGIFGKIDALINNAGIRGN 122

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0046686 "response to cadmium ion" evidence=IEP

TAIR|locus:505006251 AT2G17845 [Arabidopsis thaliana (taxid:3702)]

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 66/102 (64%), Positives = 84/102 (82%)

Query:    14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
             +L +KVV+VTGASSG+GRE CLDLAKAGC+I+AAARRVDRLKSLC EIN+         +
Sbjct:    46 ELKDKVVLVTGASSGIGREVCLDLAKAGCKIIAAARRVDRLKSLCSEINR---FEYSAGI 102

Query:    74 RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
             +A A+ELDV +D AT++ +V+KAWE FG++DAL+NNAG RGN
Sbjct:   103 QAEALELDVSSDAATVQKAVKKAWEIFGKIDALINNAGFRGN 144

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TIGR_CMR|GSU_1603 GSU_1603 "3-oxoacyl-(acyl-carrier-protein) reductase" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
 Identities = 42/95 (44%), Positives = 55/95 (57%)

Query:    18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
             K+ +VTGAS G+GRE  L LA+ G  +   A  +D  +   DEI + G        RA+A
Sbjct:     6 KIAVVTGASRGIGREIALRLAREGADVAVTATTLDSARKTADEIEQIGR-------RALA 58

Query:    78 VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             + +DV AD A +E       EAFG+VD LVNNAGI
Sbjct:    59 LAVDV-ADAAAVEALFASVVEAFGKVDILVNNAGI 92

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

TAIR|locus:2159737 HSD4 "hydroxysteroid dehydrogenase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 9.2e-12, P = 9.2e-12
 Identities = 41/98 (41%), Positives = 56/98 (57%)

Query:    15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
             +N KVV++TG+SSG+G     + A+ G  +   ARR DRL+ + D   K   +GSPD V 
Sbjct:    45 VNGKVVIITGSSSGIGEHLAYEYARRGAYLTLVARREDRLQVVADRCRK---LGSPD-VA 100

Query:    75 AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
              V  ++ V  D       VQ+    FGR+D LVNNAGI
Sbjct:   101 VVRGDVSVIKDCKRF---VQETISRFGRLDHLVNNAGI 135

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2832482 HSD7 "hydroxysteroid dehydrogenase 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 9.2e-12, P = 9.2e-12
 Identities = 41/98 (41%), Positives = 56/98 (57%)

Query:    15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
             +N KVV++TG+SSG+G     + A+ G  +   ARR DRL+ + D   K   +GSPD V 
Sbjct:    45 VNGKVVIITGSSSGIGEHLAYEYARRGAYLTLVARREDRLQVVADRCRK---LGSPD-VA 100

Query:    75 AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
              V  ++ V  D       VQ+    FGR+D LVNNAGI
Sbjct:   101 VVRGDVSVIKDCKRF---VQETISRFGRLDHLVNNAGI 135

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TIGR_CMR|BA_3989 BA_3989 "3-oxoacyl-(acyl-carrier-protein) reductase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 154 (59.3 bits), Expect = 3.9e-11, P = 3.9e-11
 Identities = 41/99 (41%), Positives = 56/99 (56%)

Query:    15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDSV 73
             L  KV +VTGAS G+GR   +DLAK G  +V   A    +   + DEI K   +GS    
Sbjct:     2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKK---LGSD--- 55

Query:    74 RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
              A+AV  DV A+   +   V++  + FG+VD LVNNAG+
Sbjct:    56 -AIAVRADV-ANAEDVTNMVKQTVDVFGQVDILVNNAGV 92

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

WB|WBGene00000993 dhs-30 [Caenorhabditis elegans (taxid:6239)]

 Score = 152 (58.6 bits), Expect = 1.8e-10, P = 1.8e-10
 Identities = 38/110 (34%), Positives = 59/110 (53%)

Query:     8 HLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMV 67
             H  P  D+  KVV++TGASSGLG+    +L K G +++  AR  ++LK +C+E+ +   +
Sbjct:    38 HNLPKLDVKNKVVVITGASSGLGKSLAFELYKRGAQVILLARSTEKLKEICEELKETFPL 97

Query:    68 GSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI--RGN 115
                + +       D+  D      S Q  W    RVD L+NNAG+  RG+
Sbjct:    98 NQNEPIYYY---FDI-TD------SEQAPWAEIPRVDILINNAGMSNRGS 137

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0004488 "methylenetetrahydrofolate dehydrogenase (NADP+) activity" evidence=IEA

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	115
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	1e-24
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	1e-23
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	9e-23
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	1e-20
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	3e-20
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	1e-19
cd05233	234	cd05233, SDR_c, classical (c) SDRs	2e-19
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-19
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	4e-19
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-18
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	1e-18
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-18
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	6e-18
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	7e-18
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	3e-17
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	5e-17
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	6e-17
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	7e-17
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	8e-17
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	2e-16
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	3e-16
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	4e-16
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	6e-16
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	7e-16
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-16
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	1e-15
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	2e-15
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	2e-15
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-15
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	3e-15
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	3e-15
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	7e-15
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	8e-15
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	1e-14
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	1e-14
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	2e-14
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	2e-14
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	3e-14
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	4e-14
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	4e-14
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	5e-14
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	8e-14
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-13
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	2e-13
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	2e-13
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	3e-13
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	3e-13
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	4e-13
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	4e-13
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	6e-13
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	6e-13
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	6e-13
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	9e-13
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	9e-13
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	1e-12
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	1e-12
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	2e-12
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	2e-12
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-12
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	2e-12
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	3e-12
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	3e-12
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	3e-12
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	4e-12
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	4e-12
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	5e-12
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	5e-12
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-11
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	2e-11
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	2e-11
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	2e-11
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	2e-11
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	2e-11
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	2e-11
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	2e-11
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	3e-11
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	3e-11
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	3e-11
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	3e-11
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	5e-11
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	7e-11
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	8e-11
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-10
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	1e-10
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-10
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	2e-10
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	2e-10
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	2e-10
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	2e-10
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	2e-10
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	3e-10
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	3e-10
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	3e-10
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	3e-10
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	3e-10
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	3e-10
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	4e-10
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	5e-10
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	5e-10
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	5e-10
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	6e-10
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	6e-10
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	6e-10
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	7e-10
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	7e-10
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	7e-10
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	1e-09
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	1e-09
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	1e-09
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	1e-09
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-09
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	1e-09
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	2e-09
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	2e-09
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	2e-09
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	2e-09
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	2e-09
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	3e-09
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	3e-09
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	3e-09
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	3e-09
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	4e-09
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	5e-09
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	6e-09
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	6e-09
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-09
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	6e-09
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	6e-09
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	6e-09
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	7e-09
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	7e-09
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	8e-09
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	1e-08
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	1e-08
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	1e-08
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	1e-08
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	2e-08
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	2e-08
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	2e-08
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	2e-08
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	2e-08
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	2e-08
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	2e-08
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	3e-08
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	3e-08
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	3e-08
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	3e-08
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	4e-08
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	4e-08
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	5e-08
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	5e-08
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	6e-08
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	6e-08
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	7e-08
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	8e-08
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	1e-07
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	1e-07
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	1e-07
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	2e-07
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	2e-07
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	2e-07
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	2e-07
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	2e-07
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	2e-07
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	3e-07
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	3e-07
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	4e-07
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	5e-07
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	6e-07
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	6e-07
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	6e-07
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	7e-07
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	7e-07
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	9e-07
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	1e-06
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	1e-06
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-06
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	1e-06
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	1e-06
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	1e-06
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	2e-06
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	2e-06
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	2e-06
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	3e-06
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	4e-06
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	4e-06
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	5e-06
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-06
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	6e-06
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	8e-06
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	9e-06
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	1e-05
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	1e-05
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	1e-05
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	1e-05
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	1e-05
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	2e-05
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	2e-05
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	3e-05
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	3e-05
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	3e-05
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	4e-05
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	4e-05
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	4e-05
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	5e-05
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	5e-05
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	8e-05
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	9e-05
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-04
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	1e-04
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	1e-04
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	2e-04
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	3e-04
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	4e-04
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	4e-04
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	5e-04
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	6e-04
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	7e-04
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	8e-04
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.001
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	0.001
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	0.001
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	0.001
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.001
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	0.001
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	0.001
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	0.001
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	0.002
PRK07424	406	PRK07424, PRK07424, bifunctional sterol desaturase	0.002
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	0.002
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	0.002
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	0.003
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	0.004
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	0.004

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 93.1 bits (232), Expect = 1e-24
 Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 11/95 (11%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           KVV++TG SSG+G    L LA  G R++A AR  D+L+SL + +N               
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGELLN----------DNLEV 50

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +ELDV  D  +I+ +V++  E FGR+D LVNNAG 
Sbjct: 51  LELDVT-DEESIKAAVKEVIERFGRIDVLVNNAGY 84

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 90.7 bits (226), Expect = 1e-23
 Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 7/98 (7%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  KVV++TGASSG+G E    LA+ G R+V +ARR +RL+ +  E  + G      +  
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELG------APS 54

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
              V LD+ +D    E  V++A + FG +D L+NNAGI
Sbjct: 55  PHVVPLDM-SDLEDAEQVVEEALKLFGGLDILINNAGI 91

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 88.5 bits (220), Expect = 9e-23
 Identities = 44/98 (44%), Positives = 61/98 (62%), Gaps = 10/98 (10%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  KV ++TGASSG+G      LA+AG ++V AARR +RL++L DEI             
Sbjct: 4   LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA---------GA 54

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           A+A+ LDV  D A +E +++   E FGR+D LVNNAG+
Sbjct: 55  ALALALDVT-DRAAVEAAIEALPEEFGRIDILVNNAGL 91

Length = 246

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 82.6 bits (205), Expect = 1e-20
 Identities = 38/95 (40%), Positives = 48/95 (50%), Gaps = 8/95 (8%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           KV +VTGAS G+GR   L LA  G ++    R  +      +EI   G         A A
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALG-------GNAAA 53

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +E DV +D   +E  V+K    FG VD LVNNAGI
Sbjct: 54  LEADV-SDREAVEALVEKVEAEFGPVDILVNNAGI 87

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 82.2 bits (203), Expect = 3e-20
 Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 8/104 (7%)

Query: 13  HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR--LKSLCDEINKPGMVGSP 70
            DL+ KV +VTGASSG+GR     LA+ G R+V AARR +    ++L   I + G     
Sbjct: 1   MDLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAG----- 55

Query: 71  DSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
              RA AV  DV  D  ++E  V  A E FGR+D LVNNAGI G
Sbjct: 56  -GGRAAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAG 98

Length = 251

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 80.4 bits (199), Expect = 1e-19
 Identities = 41/95 (43%), Positives = 54/95 (56%), Gaps = 8/95 (8%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           KVV++TGAS G+GR   + LA+AG ++V AAR   RL SL  E+   G         A+ 
Sbjct: 2   KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHG-------GEALV 54

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           V  DV +D    E  ++ A   FG +D LVNNAGI
Sbjct: 55  VPTDV-SDAEACERLIEAAVARFGGIDILVNNAGI 88

Length = 263

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 79.6 bits (197), Expect = 2e-19
 Identities = 40/93 (43%), Positives = 52/93 (55%), Gaps = 9/93 (9%)

Query: 20  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVE 79
            +VTGASSG+GR     LA+ G ++V A R  + L  L       G         AVAV+
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAIEALGG--------NAVAVQ 52

Query: 80  LDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            DV +D   +E  V++A E FGR+D LVNNAGI
Sbjct: 53  ADV-SDEEDVEALVEEALEEFGRLDILVNNAGI 84

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 79.1 bits (196), Expect = 3e-19
 Identities = 41/99 (41%), Positives = 51/99 (51%), Gaps = 9/99 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  KV +VTGASSG+G       A  G R+V   R  +  + +  EI   G        
Sbjct: 2   RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGG-------- 53

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           RA+AV  DV +D A +E +V  A E FG VD LVNNAG 
Sbjct: 54  RAIAVAADV-SDEADVEAAVAAALERFGSVDILVNNAGT 91

Length = 251

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 78.7 bits (194), Expect = 4e-19
 Identities = 45/98 (45%), Positives = 60/98 (61%), Gaps = 8/98 (8%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  KV +VTGASSG+G      LA  G  +  AARRVDRL++L DE+   G        +
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGG-------K 53

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           A+ +ELDV  D   ++ +V++  EA GR+D LVNNAGI
Sbjct: 54  ALVLELDV-TDEQQVDAAVERTVEALGRLDILVNNAGI 90

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 77.5 bits (192), Expect = 1e-18
 Identities = 39/100 (39%), Positives = 53/100 (53%), Gaps = 9/100 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRL-KSLCDEINKPGMVGSPDS 72
            L  KV +VTGAS G+GR     LA  G  +V      +   ++L  EI   G       
Sbjct: 2   SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALG------- 54

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            +A+AV+ DV +D  ++E +V +A   FG VD LVNNAGI
Sbjct: 55  GKALAVQGDV-SDAESVERAVDEAKAEFGGVDILVNNAGI 93

Length = 248

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 77.9 bits (192), Expect = 1e-18
 Identities = 46/99 (46%), Positives = 60/99 (60%), Gaps = 8/99 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           +L  KV +VTGASSGLG  F   LA+AG ++V A+RRV+RLK L  EI   G  G+    
Sbjct: 6   NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEG--GA---- 59

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            A  V LDV  D  +I+ +V  A    G +D LVNN+G+
Sbjct: 60  -AHVVSLDV-TDYQSIKAAVAHAETEAGTIDILVNNSGV 96

Length = 258

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 76.7 bits (190), Expect = 2e-18
 Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 8/99 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  K  +VTGAS G+GR   L LA  G ++V      +  ++L  E+   G        
Sbjct: 2   SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAG-------G 54

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            A  +  DV +D A +   ++ A EAFG +D LVNNAGI
Sbjct: 55  EARVLVFDV-SDEAAVRALIEAAVEAFGALDILVNNAGI 92

Length = 246

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 77.3 bits (191), Expect = 6e-18
 Identities = 43/116 (37%), Positives = 57/116 (49%), Gaps = 18/116 (15%)

Query: 8   HLEPW----HDLNE----KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD 59
           HL+P      DL      KVV++TGASSG+GR   + +A+AG  +   AR  + L  L  
Sbjct: 354 HLDPDRARRRDLRGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVA 413

Query: 60  EINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG--IR 113
           EI   G         A A   D+  D A ++ +V+      G VD LVNNAG  IR
Sbjct: 414 EIRAKGG-------TAHAYTCDL-TDSAAVDHTVKDILAEHGHVDYLVNNAGRSIR 461

Length = 657

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 76.5 bits (189), Expect = 7e-18
 Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 8/98 (8%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           +  +VV++TGAS+G+GR      A+ G ++V  AR  + L++L  EI   G         
Sbjct: 6   IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAG-------GE 58

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           A+AV  DV AD   ++ +  +A E  G +D  VNNA +
Sbjct: 59  ALAVVADV-ADAEAVQAAADRAEEELGPIDTWVNNAMV 95

Length = 334

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 73.9 bits (182), Expect = 3e-17
 Identities = 39/99 (39%), Positives = 52/99 (52%), Gaps = 8/99 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  KV +VTGAS G+G      LA+AG  IV  +R  ++ +     I K G       V
Sbjct: 2   SLKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEG-------V 54

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            A A   DV  + A I+ +V+   E FG++D LVNNAGI
Sbjct: 55  EATAFTCDVSDEEA-IKAAVEAIEEDFGKIDILVNNAGI 92

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 73.4 bits (181), Expect = 5e-17
 Identities = 41/100 (41%), Positives = 50/100 (50%), Gaps = 8/100 (8%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           LN KV ++TGASSG+GR      A+ G ++V  ARR   L  L  EI   G         
Sbjct: 4   LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGG-------E 56

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
           AVA+  DV  D A  +  V  A E FG +D   NNAG  G
Sbjct: 57  AVALAGDVR-DEAYAKALVALAVERFGGLDIAFNNAGTLG 95

Length = 254

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 73.1 bits (180), Expect = 6e-17
 Identities = 38/95 (40%), Positives = 50/95 (52%), Gaps = 8/95 (8%)

Query: 17  EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
            KV +VT ASSG+G      LA+ G R+   AR  + L+    E+   G          +
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGG-------AGVL 53

Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           AV  D+  D   I+  V+KA +AFGRVD LVNNAG
Sbjct: 54  AVVADL-TDPEDIDRLVEKAGDAFGRVDILVNNAG 87

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 73.0 bits (180), Expect = 7e-17
 Identities = 31/95 (32%), Positives = 56/95 (58%), Gaps = 6/95 (6%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           KVV++TGA+SG+G+E   +LAK G  ++ A R  ++ +    EI K     + ++ +   
Sbjct: 2   KVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKE----TGNA-KVEV 56

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           ++LD+ +  A++    ++    F R+D L+NNAGI
Sbjct: 57  IQLDL-SSLASVRQFAEEFLARFPRLDILINNAGI 90

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 73.1 bits (180), Expect = 8e-17
 Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 11/97 (11%)

Query: 16  NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRA 75
            EKV  +TGAS G GR +     + G R+VA AR    L  L ++          D +  
Sbjct: 2   MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY--------GDRL-- 51

Query: 76  VAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           + + LDV  D A +  +V+ A E FGR+D +VNNAG 
Sbjct: 52  LPLALDVT-DRAAVFAAVETAVEHFGRLDIVVNNAGY 87

Length = 275

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 71.9 bits (177), Expect = 2e-16
 Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 7/94 (7%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           K V++TGASSG+G       AKAG +++   RR +RL+ L DE+      G+   V+ + 
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADEL------GAKFPVKVLP 54

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           ++LDV +D  +IE +++   E F  +D LVNNAG
Sbjct: 55  LQLDV-SDRESIEAALENLPEEFRDIDILVNNAG 87

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 71.1 bits (175), Expect = 3e-16
 Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 8/98 (8%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  KV +VTGA+SG+G E  L LAK G ++V A    +   +  + + K G        +
Sbjct: 2   LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAG-------GK 54

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           A+ V +DV  D   I   +  A E FG VD LVNNAGI
Sbjct: 55  AIGVAMDV-TDEEAINAGIDYAVETFGGVDILVNNAGI 91

Length = 258

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 71.1 bits (175), Expect = 4e-16
 Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 7/101 (6%)

Query: 12  WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPD 71
              +  K  ++TGASSG+G E    LA+ G  ++  ARR D+L++L  E+          
Sbjct: 1   PGPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT------ 54

Query: 72  SVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            V    +  D+    A +E    +  E  G +D LVNNAG 
Sbjct: 55  GVEVEVIPADLSDPEA-LERLEDELKERGGPIDVLVNNAGF 94

Length = 265

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 70.4 bits (173), Expect = 6e-16
 Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 8/98 (8%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  K  +VTGA+ GLG  F   LA+AG  +          + L   +   G        R
Sbjct: 5   LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGG-------R 57

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           A A+  D+ AD A+++     A  A G +D LVNNAGI
Sbjct: 58  AHAIAADL-ADPASVQRFFDAAAAALGGLDGLVNNAGI 94

Length = 250

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 70.4 bits (173), Expect = 7e-16
 Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 14/94 (14%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           KV +VTGASSG+G+     LA  G  +  AARRVD+++ L              S+    
Sbjct: 4   KVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL-------------ASLGVHP 50

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           + LDV  D A+I+ +V       GR+D LVNNAG
Sbjct: 51  LSLDV-TDEASIKAAVDTIIAEEGRIDVLVNNAG 83

Length = 273

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 69.9 bits (172), Expect = 8e-16
 Identities = 41/100 (41%), Positives = 54/100 (54%), Gaps = 9/100 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKPGMVGSPDS 72
            L  +V +VTGA+ GLGR   L LA+AG   +V      +  + L + +   G       
Sbjct: 3   SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALG------- 55

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            RA AV+ DV  D A +E +V  A E FGR+D LVNNAGI
Sbjct: 56  RRAQAVQADV-TDKAALEAAVAAAVERFGRIDILVNNAGI 94

Length = 249

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 69.9 bits (172), Expect = 1e-15
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 10/103 (9%)

Query: 13  HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDS 72
             L  KV ++TG    LG     +LA+AG ++    R  ++ +++  EI   G       
Sbjct: 6   FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGG------ 59

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
             A+AV+ DV  D  ++E + Q+  E FG  D L+N AG  GN
Sbjct: 60  -EALAVKADV-LDKESLEQARQQILEDFGPCDILINGAG--GN 98

Length = 278

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 68.9 bits (169), Expect = 2e-15
 Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 7/99 (7%)

Query: 16  NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRA 75
            +K++++TGA+  +G+ FC  L  AG R++ A      L+ L +E+       +    R 
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEEL------TNLYKNRV 54

Query: 76  VAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
           +A+ELD+     +I+  ++   E FGR+D L+NNA    
Sbjct: 55  IALELDI-TSKESIKELIESYLEKFGRIDILINNAYPSP 92

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 69.0 bits (169), Expect = 2e-15
 Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 5/98 (5%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L+ KV ++TG+SSG+G    +  A+ G R+    R  +RL+       + G+        
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKK---- 56

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            + V  D+  +    +  +      FGR+D LVNNAGI
Sbjct: 57  ILLVVADL-TEEEGQDRIISTTLAKFGRLDILVNNAGI 93

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 68.7 bits (169), Expect = 3e-15
 Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 9/100 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKPGMVGSPDS 72
            L  KV +VTGAS G+GR     LAK G + ++A     +  + L +EI + G       
Sbjct: 2   KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEG------- 54

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             A+AV+ DV +    +E  V++  E FG++D LVNNAGI
Sbjct: 55  GDAIAVKADV-SSEEDVENLVEQIVEKFGKIDILVNNAGI 93

Length = 247

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 68.4 bits (168), Expect = 3e-15
 Identities = 41/96 (42%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  KVV+V+G   GLGR   +  A+AG  +V AAR  +RL  +  EI+           R
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEID-------DLGRR 55

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
           A+AV  D+  D       V  A E FGRVDALVNNA
Sbjct: 56  ALAVPTDI-TDEDQCANLVALALERFGRVDALVNNA 90

Length = 258

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 68.8 bits (169), Expect = 3e-15
 Identities = 34/97 (35%), Positives = 41/97 (42%), Gaps = 11/97 (11%)

Query: 16  NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRA 75
           + K  ++TG SSG GR        AG R+V   R                    PD  RA
Sbjct: 3   SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEA--------LHPD--RA 52

Query: 76  VAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +A  LDV  D   I+  V  A   FG +D LVNNAG 
Sbjct: 53  LARLLDV-TDFDAIDAVVADAEATFGPIDVLVNNAGY 88

Length = 277

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 67.2 bits (165), Expect = 7e-15
 Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)

Query: 20  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-RLKSLCDEINKPGMVGSPDSVRAVAV 78
            +VTGAS G+GR   L LAK G +++   R  +   + + +E+   G       V+A+ V
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYG-------VKALGV 53

Query: 79  ELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             DV +D   ++  V++  E  G +D LVNNAGI
Sbjct: 54  VCDV-SDREDVKAVVEEIEEELGPIDILVNNAGI 86

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 67.7 bits (166), Expect = 8e-15
 Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 10/99 (10%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           DL +K V++TGAS G+G+     LA AG R++   R  ++L++L   +  PG        
Sbjct: 2   DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPG-------- 53

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           R   V  D+    A  E  V       G ++ L+NNAG+
Sbjct: 54  RHRWVVADLT-SEAGREA-VLARAREMGGINVLINNAGV 90

Length = 263

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 67.3 bits (165), Expect = 1e-14
 Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 8/98 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           DL+ K  +VTG S GLG +    L +AG R+V +AR+ + L+     +   G       +
Sbjct: 9   DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALG-------I 61

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
            A+ +  D  AD A IE   ++  E FG VD LVNNAG
Sbjct: 62  DALWIAAD-VADEADIERLAEETLERFGHVDILVNNAG 98

Length = 259

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 67.0 bits (164), Expect = 1e-14
 Identities = 42/108 (38%), Positives = 53/108 (49%), Gaps = 20/108 (18%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR---------LKSLCDEINKP 64
             + +VV+VTGA  GLGR + L  A+ G ++V      DR            + DEI   
Sbjct: 2   RFDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAA 61

Query: 65  GMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           G        +AVA    V  DG  I   V+ A +AFGRVD LVNNAGI
Sbjct: 62  GG-------KAVANYDSV-EDGEKI---VKTAIDAFGRVDILVNNAGI 98

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 66.2 bits (162), Expect = 2e-14
 Identities = 36/97 (37%), Positives = 46/97 (47%), Gaps = 16/97 (16%)

Query: 20  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVE 79
           V++TGASSG+GR    + AKAG  +  AARR DRL  L  E+  P       SV      
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNP-----NPSVE--VEI 53

Query: 80  LDVCADGATIEISVQKAWEAF----GRVDALVNNAGI 112
           LDV     T E   Q          G +D ++ NAG+
Sbjct: 54  LDV-----TDEERNQLVIAELEAELGGLDLVIINAGV 85

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 66.1 bits (162), Expect = 2e-14
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 9/101 (8%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  KV  +TG  +G+G+      A+ G  +  A R+ + L++  +EI+           R
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSAT------GGR 54

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
           A  ++ DV  D   +E +V +  + FG++D L+NNA   GN
Sbjct: 55  AHPIQCDV-RDPEAVEAAVDETLKEFGKIDILINNAA--GN 92

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 66.1 bits (162), Expect = 3e-14
 Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 16/97 (16%)

Query: 16  NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRA 75
           N KV +VTGASSG+GR     LA+AG R+   +R              P        V  
Sbjct: 3   NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRN-------------PARAAPIPGVE- 48

Query: 76  VAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             +ELDV  D A+++ +V +     GR+D LVNNAG+
Sbjct: 49  -LLELDV-TDDASVQAAVDEVIARAGRIDVLVNNAGV 83

Length = 270

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 66.4 bits (163), Expect = 4e-14
 Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 17/99 (17%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           KV +VTGA+ G+G+     LA  G  +V A    +  ++   E+  P         RA+ 
Sbjct: 423 KVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPD--------RALG 474

Query: 78  VELDVCADGATIEISVQKAWE----AFGRVDALVNNAGI 112
           V  DV     T E +VQ A+E    AFG VD +V+NAGI
Sbjct: 475 VACDV-----TDEAAVQAAFEEAALAFGGVDIVVSNAGI 508

Length = 681

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 65.8 bits (161), Expect = 4e-14
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 7/96 (7%)

Query: 16  NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRA 75
           N+K+ +VTGASSG G    L+LAK G  ++A  R  ++ ++L  +  +  +     +++ 
Sbjct: 2   NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNL---QQNIKV 58

Query: 76  VAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
               LDV  D  +I  + Q   +  GR+D LVNNAG
Sbjct: 59  QQ--LDV-TDQNSIH-NFQLVLKEIGRIDLLVNNAG 90

Length = 280

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 65.1 bits (159), Expect = 5e-14
 Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 8/94 (8%)

Query: 19  VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAV 78
           VV++TGASSG+GR   L  A+ G ++V AAR  + L  L  E+ + G         A+AV
Sbjct: 2   VVVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGG-------EAIAV 54

Query: 79  ELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             DV AD A +E +   A E FGR+D  VNNAG+
Sbjct: 55  VADV-ADAAQVERAADTAVERFGRIDTWVNNAGV 87

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 64.9 bits (158), Expect = 8e-14
 Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 8/100 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           +LN K  +VTGA+SG+G+E  L+LA+AG  +  A    D   ++ DEINK G        
Sbjct: 4   NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAG-------G 56

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIR 113
           +A+ V +DV  + A +   + K  E FG VD LV+NAGI+
Sbjct: 57  KAIGVAMDVTNEDA-VNAGIDKVAERFGSVDILVSNAGIQ 95

Length = 262

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 63.9 bits (156), Expect = 1e-13
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 8/99 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  K  ++TGA  G+GR   + LAK G  +   AR  + LK++ +E+   G       V
Sbjct: 4   SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYG-------V 56

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           + V    DV +D   +  ++++     G +D L+NNAGI
Sbjct: 57  KVVIATADV-SDYEEVTAAIEQLKNELGSIDILINNAGI 94

Length = 239

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 64.2 bits (157), Expect = 2e-13
 Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 15/105 (14%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD---RLK----SLCDEINKPGM 66
            L+ K + +TGAS G+G    L  A+ G  IV AA+  +   +L     +  +EI   G 
Sbjct: 3   SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAG- 61

Query: 67  VGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
                  +A+ +  DV  D   +  +V KA E FG +D  VNNA 
Sbjct: 62  ------GQALPLVGDV-RDEDQVAAAVAKAVERFGGIDICVNNAS 99

Length = 273

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 63.4 bits (155), Expect = 2e-13
 Identities = 37/99 (37%), Positives = 45/99 (45%), Gaps = 15/99 (15%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARR----VDRLKSLCDEINKPGMVGSPDSV 73
            V +VTGA+  +GR     LA  G R+V    R      RLK   DE+N           
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLK---DELNALR-------N 50

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            AV V+ D+  D A     V  A+ AFGR D LVNNA  
Sbjct: 51  SAVLVQADLS-DFAACADLVAAAFRAFGRCDVLVNNASA 88

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 63.2 bits (154), Expect = 3e-13
 Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 10/99 (10%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  KV +VTGA++GLG+   + LA+AG  IV A R         +   +   +G     
Sbjct: 2   SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRS-----EPSETQQQVEALGR---- 52

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           R +++  D+ +D   I+  V  A E FG +D LVNNAGI
Sbjct: 53  RFLSLTADL-SDIEAIKALVDSAVEEFGHIDILVNNAGI 90

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 63.2 bits (154), Expect = 3e-13
 Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 20/109 (18%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-----RVDRLKSL-------CDEIN 62
           L+ KV  VTGAS G+GR   L LAKAG  +V AA+          KSL        +EI 
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60

Query: 63  KPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
             G        +A+ + +DV  D   +   V+   + FGR+D LVNNAG
Sbjct: 61  AAG-------GQALPIVVDV-RDEDQVRALVEATVDQFGRLDILVNNAG 101

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 63.1 bits (154), Expect = 4e-13
 Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 6/96 (6%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  K +++TGA   +G      + +AG  ++AA    + L  L + + K        S +
Sbjct: 2   LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGK-----EFKSKK 56

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
              VELD+  D  ++E  + K+ E +G++D  VN A
Sbjct: 57  LSLVELDIT-DQESLEEFLSKSAEKYGKIDGAVNCA 91

Length = 256

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 62.6 bits (153), Expect = 4e-13
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 8/99 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           DL  +V +VTGA+ G+GR   + LA  G  ++      D   +  + +   G        
Sbjct: 3   DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGG------- 55

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +A A ++DV  D A ++ +V    E FGR+D LV NAGI
Sbjct: 56  KARARQVDV-RDRAALKAAVAAGVEDFGRLDILVANAGI 93

Length = 251

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 62.8 bits (153), Expect = 6e-13
 Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 10/103 (9%)

Query: 13  HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDS 72
            DL  K +++TGASSG+G       A+ G  +VA ARR D L ++ D I + G       
Sbjct: 36  VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAG-----GD 90

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG--IR 113
             AV  +L   +D   ++  V    +  G VD L+NNAG  IR
Sbjct: 91  AMAVPCDL---SDLDAVDALVADVEKRIGGVDILINNAGRSIR 130

Length = 293

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 62.4 bits (152), Expect = 6e-13
 Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 9/101 (8%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKPGMVGSPDSV 73
           L  KV +VTGASSG+G+   + LA AG  +V   R + D  + + +EI   G        
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVG-------G 53

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
           +A+AV+ DV +    +    Q A + FG +D LVNNAG++G
Sbjct: 54  KAIAVQADV-SKEEDVVALFQSAIKEFGTLDILVNNAGLQG 93

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 62.2 bits (151), Expect = 6e-13
 Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 8/97 (8%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L+ K  ++TGA +G+G+E  +  A AG  +V +    D    + DEI + G        +
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG-------Q 61

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           A A   D+      +      A    G+VD LVNNAG
Sbjct: 62  AFACRCDI-TSEQELSALADFALSKLGKVDILVNNAG 97

Length = 255

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 62.0 bits (151), Expect = 9e-13
 Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 6/98 (6%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  KV +VTGA+ G+G       A+ G  +  A       +     I +          R
Sbjct: 5   LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDV-----AGAR 59

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            +AV  DV  D A++  +V  A EAFG +D LVNNAGI
Sbjct: 60  VLAVPADV-TDAASVAAAVAAAEEAFGPLDVLVNNAGI 96

Length = 260

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 62.0 bits (151), Expect = 9e-13
 Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 6/96 (6%)

Query: 17  EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
            +V +V G    LG   C  LA+ G R+  A    ++  ++  EIN            A 
Sbjct: 2   NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEIN-----AEYGEGMAY 56

Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               D      ++    +   E FGRVD LV NAGI
Sbjct: 57  GFGADAT-SEQSVLALSRGVDEIFGRVDLLVYNAGI 91

Length = 259

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 61.5 bits (150), Expect = 1e-12
 Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 9/98 (9%)

Query: 16  NEKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
              V +VTG   G+G      LA AG  + +      + L +   E+   G       V 
Sbjct: 1   MRPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALG-------VE 53

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            +    DV AD +  E  +  A  A+GR+D LVNNAG+
Sbjct: 54  VIFFPADV-ADLSAHEAMLDAAQAAWGRIDCLVNNAGV 90

Length = 256

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 61.6 bits (150), Expect = 1e-12
 Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 11/105 (10%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKPGMVGSPDS 72
            L+ KV +VTG + GLG       A+ G   +V   R  ++ ++   E+   G       
Sbjct: 3   RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALG------- 55

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI--RGN 115
            +AV V+ D+ +D       V  A EAFGR+DALVN AG+  RG 
Sbjct: 56  AKAVFVQADL-SDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGT 99

Length = 260

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 61.2 bits (149), Expect = 2e-12
 Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 16/99 (16%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGM----VGSPDSV 73
           KV ++TG +SG+G      L K G ++            + D    PG           V
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVA-----------ILDRNENPGAAAELQAINPKV 49

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +A  V+ DV +    +  + +KA E FGRVD L+NNAGI
Sbjct: 50  KATFVQCDVTSWEQ-LAAAFKKAIEKFGRVDILINNAGI 87

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 61.2 bits (149), Expect = 2e-12
 Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 8/93 (8%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           KVV++TG SSG+G+      A+ G  +V   R  ++L+    EI +          + + 
Sbjct: 2   KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPG-------QVLT 54

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
           V++DV  +   ++  V++  E FGR+DAL+NNA
Sbjct: 55  VQMDV-RNPEDVQKMVEQIDEKFGRIDALINNA 86

Length = 252

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 61.1 bits (149), Expect = 2e-12
 Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 8/99 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           DL +KV+++TG + GLGR     LA+ G ++       ++L+    E    G        
Sbjct: 2   DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALG-------T 54

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                  +V  D   +E +  +  E FG+++ L+NNAGI
Sbjct: 55  EVRGYAANV-TDEEDVEATFAQIAEDFGQLNGLINNAGI 92

Length = 253

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 60.9 bits (148), Expect = 2e-12
 Identities = 37/96 (38%), Positives = 48/96 (50%), Gaps = 9/96 (9%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-LKSLCDEINKPGMVGSPDSVRAV 76
           KV ++TGA+ G+GR     LA  G  IV A   ++   KS   EI+            AV
Sbjct: 3   KVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEIS-------EAGYNAV 55

Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           AV  DV  D   +E  + +A E FG  D +VNNAGI
Sbjct: 56  AVGADV-TDKDDVEALIDQAVEKFGSFDVMVNNAGI 90

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 60.4 bits (147), Expect = 3e-12
 Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 9/98 (9%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  KV ++TG S G+G      L   G ++   AR    L+    E+N  G         
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKG--------N 55

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            + +  DV  D A ++ +V     AFG +D L+ NAG+
Sbjct: 56  VLGLAADV-RDEADVQRAVDAIVAAFGGLDVLIANAGV 92

Length = 237

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 60.3 bits (147), Expect = 3e-12
 Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 9/96 (9%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
           KV +VTGA+ G+G E    LAK+G   ++  AR V+R ++  +++   G       +   
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEG-------LSVR 53

Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             +LDV  D A+IE +     E +G +D LVNNAGI
Sbjct: 54  FHQLDV-TDDASIEAAADFVEEKYGGLDILVNNAGI 88

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 60.3 bits (147), Expect = 3e-12
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 4/95 (4%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           K V++TG SSG+G+    +L K G  ++  AR   +L+   +EI +     S   V  ++
Sbjct: 2   KHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEI-EAEANASGQKVSYIS 60

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            +L   +D   +E +  +A E  G  D +VN AGI
Sbjct: 61  ADL---SDYEEVEQAFAQAVEKGGPPDLVVNCAGI 92

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 60.1 bits (146), Expect = 4e-12
 Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 9/95 (9%)

Query: 17  EKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDSVRA 75
            KV +VTG+S G+G+   L LA+ G  I    AR     +   +EI   G        +A
Sbjct: 4   GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALG-------RKA 56

Query: 76  VAVELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
           +AV+ +V  D   I+    +  E FGR+D  VNNA
Sbjct: 57  LAVKANV-GDVEKIKEMFAQIDEEFGRLDVFVNNA 90

Length = 250

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 60.1 bits (146), Expect = 4e-12
 Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 8/101 (7%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
             ++KV +VTGA+ G+G+ +   LA+ G  +V A    +  + +  +I   G        
Sbjct: 3   RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGG------- 55

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
            A+AV++DV +D  + +        AFG +D LVNNA I G
Sbjct: 56  TAIAVQVDV-SDPDSAKAMADATVSAFGGIDYLVNNAAIYG 95

Length = 250

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 60.0 bits (146), Expect = 5e-12
 Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 9/99 (9%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDSV 73
           L  KV +VTGAS G+GR     LA+ G  +V   A      + +  EI   G        
Sbjct: 1   LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAG-------G 53

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +A+AV+ DV +D + +      A +AFG VD LVNNAG+
Sbjct: 54  KAIAVQADV-SDPSQVARLFDAAEKAFGGVDILVNNAGV 91

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 59.7 bits (145), Expect = 5e-12
 Identities = 28/95 (29%), Positives = 39/95 (41%), Gaps = 8/95 (8%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           K  +VTGA+SG+G      LA AG  +V      +  ++        G          + 
Sbjct: 2   KTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAG-------GSVIY 54

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +  DV      I   +  A   FG +D LVNNAGI
Sbjct: 55  LPADV-TKEDEIADMIAAAAAEFGGLDILVNNAGI 88

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 59.0 bits (143), Expect = 1e-11
 Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 16/102 (15%)

Query: 11  PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSP 70
              D   K  +VTGA  G+GR     LAKAG R+VA +R    L SL  E   PG+    
Sbjct: 1   MELDFAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVREC--PGIE--- 55

Query: 71  DSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                      VC D +  + + ++A  + G VD LVNNA +
Sbjct: 56  ----------PVCVDLSDWD-ATEEALGSVGPVDLLVNNAAV 86

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 58.6 bits (142), Expect = 2e-11
 Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 8/97 (8%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L+++V +VTGA  GLG    L  A+AG  ++ AAR   +L  + ++I   G        R
Sbjct: 8   LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGR-------R 60

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           A  V  D+    AT  +   +A EAFGR+D +VNN G
Sbjct: 61  AHVVAADLAHPEATAGL-AGQAVEAFGRLDIVVNNVG 96

Length = 263

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 58.5 bits (142), Expect = 2e-11
 Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 12/97 (12%)

Query: 16  NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRA 75
              V +VTG +SGLG      L   G ++V           + D  N PG   +      
Sbjct: 1   KGLVAVVTGGASGLGLATVERLLAQGAKVV-----------ILDLPNSPGETVAKLGDNC 49

Query: 76  VAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             V +DV      ++ ++  A   FGR+D +VN AGI
Sbjct: 50  RFVPVDVT-SEKDVKAALALAKAKFGRLDIVVNCAGI 85

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 58.0 bits (141), Expect = 2e-11
 Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 8/95 (8%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
              ++TGASSG+G+   L  AKAG  +   AR  D L++L  E+           V+A A
Sbjct: 7   PRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAEL-------RSTGVKAAA 59

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             +D+ ++   I   + +  E FG  D L+NNAG+
Sbjct: 60  YSIDL-SNPEAIAPGIAELLEQFGCPDVLINNAGM 93

Length = 241

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 58.5 bits (142), Expect = 2e-11
 Identities = 39/107 (36%), Positives = 50/107 (46%), Gaps = 17/107 (15%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIV---------AAARRVDRLKSLCDEINKPG 65
           L+ +VV+VTGA  G+GR   L  A  G R+V          +A      +++ DEI   G
Sbjct: 4   LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAG 63

Query: 66  MVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                    AVA   D+ AD       V  A E FG +D LVNNAGI
Sbjct: 64  G-------EAVANGDDI-ADWDGAANLVDAAVETFGGLDVLVNNAGI 102

Length = 286

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 58.3 bits (141), Expect = 2e-11
 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 6/98 (6%)

Query: 17  EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
           +KVV++TG  SGLG    + LAK G ++       + L++      K  ++        +
Sbjct: 3   DKVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEA-----AKAALLEIAPDAEVL 57

Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
            ++ DV +D A +E  V    E FGR+D   NNAGI G
Sbjct: 58  LIKADV-SDEAQVEAYVDATVEQFGRIDGFFNNAGIEG 94

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 58.0 bits (141), Expect = 2e-11
 Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 8/94 (8%)

Query: 19  VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAV 78
           +V++TG  SG+GR   L+ AK G ++V         +   + + K G        +    
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAG-------GKVHYY 53

Query: 79  ELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           + D  +    +  + +K  +  G V  L+NNAG+
Sbjct: 54  KCD-VSKREEVYEAAKKIKKEVGDVTILINNAGV 86

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 58.7 bits (142), Expect = 2e-11
 Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 6/98 (6%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  +V  VTG + G+GRE    LA  G  +V A   ++  +++  EIN     G     R
Sbjct: 412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAG-----R 466

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           AVA+++DV  D   ++ +      A+G VD +VNNAGI
Sbjct: 467 AVALKMDV-TDEQAVKAAFADVALAYGGVDIVVNNAGI 503

Length = 676

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 57.9 bits (140), Expect = 3e-11
 Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 9/97 (9%)

Query: 17  EKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKPGMVGSPDSVRA 75
             V +VTGAS G+GR    +LA  G  I +      D+   +  E+   G        RA
Sbjct: 1   RPVAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAG-------RRA 53

Query: 76  VAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +  + D+  + +  E  + +AWE FGR+D LVNNAGI
Sbjct: 54  IYFQADI-GELSDHEALLDQAWEDFGRLDCLVNNAGI 89

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 57.8 bits (140), Expect = 3e-11
 Identities = 33/99 (33%), Positives = 43/99 (43%), Gaps = 11/99 (11%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  KV +VTG + GLG      L   G ++V +    +  ++   E+            
Sbjct: 2   RLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGD---------- 51

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            A    LDV  D       V  A EAFGR+D LVNNAGI
Sbjct: 52  AARFFHLDV-TDEDGWTAVVDTAREAFGRLDVLVNNAGI 89

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 57.8 bits (140), Expect = 3e-11
 Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 9/100 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKPGMVGSPDS 72
           DL  KVV++TG S+GLGR   +   K   ++V   R   +    + +EI K G       
Sbjct: 4   DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGG------ 57

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             A+AV+ DV  +   + + +Q A + FG +D ++NNAGI
Sbjct: 58  -EAIAVKGDVTVESDVVNL-IQTAVKEFGTLDVMINNAGI 95

Length = 261

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 57.9 bits (140), Expect = 3e-11
 Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 8/99 (8%)

Query: 13  HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDS 72
             L  KV ++TG +  LG      LA+AG ++ A  R  ++   +  EI   G       
Sbjct: 1   FSLKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGG------ 54

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
            RA+A+  DV  D A++E + ++    FG VD L+N AG
Sbjct: 55  -RAIALAADV-LDRASLERAREEIVAQFGTVDILINGAG 91

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 56.8 bits (138), Expect = 5e-11
 Identities = 40/101 (39%), Positives = 48/101 (47%), Gaps = 20/101 (19%)

Query: 13  HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIV-AAARRVDRLKSLCDEINKPGMVGSPD 71
            D+  KVV+VTGA+ G+GR F   L   G   V AAAR  + +  L              
Sbjct: 2   MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLGP------------ 49

Query: 72  SVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             R V ++LDV  D A    SV  A EA   V  LVNNAGI
Sbjct: 50  --RVVPLQLDV-TDPA----SVAAAAEAASDVTILVNNAGI 83

Length = 238

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 56.7 bits (137), Expect = 7e-11
 Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 8/95 (8%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           KV +VTG + G+G+     LAK G  +  A    +  K    EIN+ G        +AVA
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGG-------KAVA 53

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            +LDV +D   +  ++ +A E FG  D +VNNAG+
Sbjct: 54  YKLDV-SDKDQVFSAIDQAAEKFGGFDVMVNNAGV 87

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 57.0 bits (138), Expect = 8e-11
 Identities = 36/108 (33%), Positives = 48/108 (44%), Gaps = 28/108 (25%)

Query: 13  HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMV----G 68
           HDL+ K  +VTG  SGLG E    LA+AG  ++  ARR D  +     I+   +V     
Sbjct: 22  HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLA 81

Query: 69  SPDSVRAVAVELDVCADGATIEISVQKAWEAFG----RVDALVNNAGI 112
             +SVRA A                    E F     R+D L+NNAG+
Sbjct: 82  DLESVRAFA--------------------ERFLDSGRRIDILINNAGV 109

Length = 315

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 56.3 bits (136), Expect = 1e-10
 Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 9/101 (8%)

Query: 13  HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVA-AARRVDRLKSLCDEINKPGMVGSPD 71
           + L +KVV+VTG+  G+GR   + LAK G  +V  A +R + +      + + G      
Sbjct: 2   YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGG----- 56

Query: 72  SVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               + V  DV        +  +   + +G  D LVNNAG+
Sbjct: 57  --EGIGVLADVSTREGCETL-AKATIDRYGVADILVNNAGL 94

Length = 252

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 56.2 bits (136), Expect = 1e-10
 Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 11/98 (11%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  KV ++TGA+SG+G          G R+V A  +  R +    EI             
Sbjct: 4   LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPA---------- 53

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           A+AV LDV     +I+  V  A E FG +D L NNA +
Sbjct: 54  AIAVSLDV-TRQDSIDRIVAAAVERFGGIDILFNNAAL 90

Length = 257

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 56.4 bits (136), Expect = 1e-10
 Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 11/97 (11%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           +VV+VTGA+ G+GR  C   A+AG ++V A R V+R +   D +               A
Sbjct: 6   RVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPD----------HHA 55

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
           + +DV +D A I    ++    FGR+D LVNNAG+  
Sbjct: 56  LAMDV-SDEAQIREGFEQLHREFGRIDVLVNNAGVTD 91

Length = 520

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 11/98 (11%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCR-IVAAARR--VDRLKSLCDEINKPGMVGSPDSVR 74
             V++TG + GLG      LA  G R +V  +RR        L  E+   G         
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALG-------AE 53

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                 DV AD   +   +     A G +D +V+NAG+
Sbjct: 54  VTVAACDV-ADRDALAALLAALPAALGPLDGVVHNAGV 90

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 55.5 bits (134), Expect = 2e-10
 Identities = 39/99 (39%), Positives = 48/99 (48%), Gaps = 17/99 (17%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           D + K V+VTGASSG+GR   + LA+ G R+VAAAR    L  L  E             
Sbjct: 6   DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETG----------- 54

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               + LDV  D A     ++ A  A G  D LVN AGI
Sbjct: 55  -CEPLRLDVGDDAA-----IRAALAAAGAFDGLVNCAGI 87

Length = 245

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 55.2 bits (133), Expect = 2e-10
 Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 7/100 (7%)

Query: 13  HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDS 72
                +V +VTGAS G+G      L + G ++V  ARRVD++++L  E       G P +
Sbjct: 2   ERWRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQS---AGYP-T 57

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +     +L   ++   I             VD  +NNAG+
Sbjct: 58  LFPYQCDL---SNEEQILSMFSAIRTQHQGVDVCINNAGL 94

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 55.3 bits (134), Expect = 2e-10
 Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 21/105 (20%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAG------CRIVAAARRVDRLKSLCDEINKPGMV 67
           +L +KVV+VTG +SG+G    L LA+ G       R        + L++L          
Sbjct: 4   NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRAL---------- 53

Query: 68  GSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                 RA  V++D+  D A    +V++    FGR+D LVNNAG+
Sbjct: 54  ----QPRAEFVQVDLT-DDAQCRDAVEQTVAKFGRIDGLVNNAGV 93

Length = 258

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 55.5 bits (134), Expect = 2e-10
 Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 11/91 (12%)

Query: 21  MVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVEL 80
            +TGASSG GR     L   G R+ A  RR D L  L             D +    ++L
Sbjct: 6   FITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKAR--------YGDRLW--VLQL 55

Query: 81  DVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           DV  D A +   V +A+ A GR+D +V+NAG
Sbjct: 56  DV-TDSAAVRAVVDRAFAALGRIDVVVSNAG 85

Length = 276

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 55.1 bits (133), Expect = 3e-10
 Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 17/100 (17%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVA-----AARRVDRLKSLCDEINKPGMVGSPDS 72
           ++ +VTG   G+G   C  LAK G R+ A       R    L+            G+   
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQ----------GALGF 50

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
              V VE DV +  +    +V K     G +D LVNNAGI
Sbjct: 51  DFRV-VEGDVSSFESCKA-AVAKVEAELGPIDVLVNNAGI 88

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 55.0 bits (133), Expect = 3e-10
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 11/98 (11%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L+ +V ++TG  SG+GR         G R+    R  ++L SL             D V 
Sbjct: 4   LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF--------GDHV- 54

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            + VE DV    A  + +V +  +AFG++D  V NAGI
Sbjct: 55  -LVVEGDV-TSYADNQRAVDQTVDAFGKLDCFVGNAGI 90

Length = 263

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 55.1 bits (133), Expect = 3e-10
 Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 11/98 (11%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  KV +VTGA SG G       A+ G R+V A    D  + +  +I         ++  
Sbjct: 3   LEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADI--------GEA-- 52

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           A+A++ DV    A +E  V+ A   FGR+D LVNNAGI
Sbjct: 53  AIAIQADV-TKRADVEAMVEAALSKFGRLDILVNNAGI 89

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 55.1 bits (133), Expect = 3e-10
 Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 8/97 (8%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKPGMVGSPDSV 73
           L+ K+ +VTGAS G+GR   L L +AG  +    R +  +L    +EI   G        
Sbjct: 1   LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGG------- 53

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
           + + V  D   D     +  + A E  GR+D LVNNA
Sbjct: 54  KCIPVRCDHSDDDEVEALFERVAREQQGRLDILVNNA 90

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 54.8 bits (132), Expect = 3e-10
 Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 9/98 (9%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  K  ++TGA  G+G       A+ G  ++        ++ L DE+   G        R
Sbjct: 4   LTGKTALITGALQGIGEGIARVFARHGANLILLDIS-PEIEKLADELCGRGH-------R 55

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             AV  DV  D A++  ++++A E  GR+D LVNNAG+
Sbjct: 56  CTAVVADV-RDPASVAAAIKRAKEKEGRIDILVNNAGV 92

Length = 263

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 55.0 bits (133), Expect = 3e-10
 Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 16/100 (16%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           +V +VTGA++GLG E    LA  G  +V A R +D+ K+    I       +P +   V 
Sbjct: 17  RVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITA----ATPGA--DVT 70

Query: 78  V-ELDVCADGATIEISVQKAWEAFG----RVDALVNNAGI 112
           + ELD+ +       SV+ A +A      R+D L+NNAG+
Sbjct: 71  LQELDLTSLA-----SVRAAADALRAAYPRIDLLINNAGV 105

Length = 306

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 54.7 bits (132), Expect = 4e-10
 Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 13/101 (12%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAA--RRVDRLKSLCDEINKPGMVGSPD 71
            L+ KV +VTG ++GLG+ + + LAKAG  I+        D  + L   I K G      
Sbjct: 12  SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRL---IEKEGR----- 63

Query: 72  SVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             +   V++D+    +  E  V++A E FG++D LVNNAG 
Sbjct: 64  --KVTFVQVDLTKPES-AEKVVKEALEEFGKIDILVNNAGT 101

Length = 258

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 54.6 bits (132), Expect = 5e-10
 Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 8/99 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           D   KV ++TGA+SG G  F    A  G ++V A  + D L     E+   G        
Sbjct: 3   DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQG-------A 55

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             + V  DV +D A +E     A E FG V  L NNAG+
Sbjct: 56  EVLGVRTDV-SDAAQVEALADAALERFGAVHLLFNNAGV 93

Length = 287

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 54.2 bits (131), Expect = 5e-10
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 12/99 (12%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L    V++TG +SG+G        +AG  ++   RR +RL     E+  P +       
Sbjct: 2   KLTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKEL--PNI------- 52

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               + LDV  D  ++E   +     +  +D L+NNAGI
Sbjct: 53  --HTIVLDV-GDAESVEALAEALLSEYPNLDILINNAGI 88

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 54.5 bits (131), Expect = 5e-10
 Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 12/99 (12%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGM--VGSPDSVRA 75
           +V +VTGA+SG+G      L K G R+   AR  + L +   E+ + G+   G    VR 
Sbjct: 4   EVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDVR- 62

Query: 76  VAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
                        IE  V  A   +G +D LVNNAG  G
Sbjct: 63  ---------SVPEIEALVAAAVARYGPIDVLVNNAGRSG 92

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 54.4 bits (131), Expect = 6e-10
 Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)

Query: 20  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVE 79
            +V GASSG+G    ++LA AG  +   ARRV++ + L D+I   G         AVA  
Sbjct: 13  ALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGG-------EAVAFP 65

Query: 80  LDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           LDV  D  +++  V +A EA G ++ LV+ AG
Sbjct: 66  LDV-TDPDSVKSFVAQAEEALGEIEVLVSGAG 96

Length = 274

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 54.6 bits (132), Expect = 6e-10
 Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 8/95 (8%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           K+V+VTGA SG+GRE  L  A+ G  +VA+       +   + I   G         A A
Sbjct: 316 KLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAG-------AVAHA 368

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             +DV +D   +E   +      G  D +VNNAGI
Sbjct: 369 YRVDV-SDADAMEAFAEWVRAEHGVPDIVVNNAGI 402

Length = 582

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 53.9 bits (130), Expect = 6e-10
 Identities = 33/95 (34%), Positives = 44/95 (46%), Gaps = 12/95 (12%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           KV +VTGAS G+G E    LA+ G R+    R  + L +L           S   V AV 
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAAL---------SASGGDVEAVP 51

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            +     D   +   V    + FGR+D LV+NAGI
Sbjct: 52  YDARDPEDARAL---VDALRDRFGRIDVLVHNAGI 83

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 54.0 bits (130), Expect = 7e-10
 Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 6/95 (6%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           K V++TGA++G+G+E   +LA+ G R++ A R + + +    EI          +   + 
Sbjct: 2   KTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEI-----RRDTLNHEVIV 56

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             LD+ A   +I     +      R+D L+NNAG+
Sbjct: 57  RHLDL-ASLKSIRAFAAEFLAEEDRLDVLINNAGV 90

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 53.8 bits (130), Expect = 7e-10
 Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 14/95 (14%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           K +++TGA SG GRE  L LA+ G  ++A  +   ++ +L  E  + G       +    
Sbjct: 3   KTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRG-------LALRV 55

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            +LD+     T  I   +A E    VD L+NNAGI
Sbjct: 56  EKLDL-----TDAIDRAQAAEW--DVDVLLNNAGI 83

Length = 257

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 54.0 bits (130), Expect = 7e-10
 Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 9/98 (9%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  KV ++TGAS+G+G+   + LA+ G  ++A     + +    D+I   G        +
Sbjct: 4   LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGG-------K 55

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           A A  +D+ +D   ++    +  E FGRVD L NNAG+
Sbjct: 56  AKAYHVDI-SDEQQVKDFASEIKEQFGRVDVLFNNAGV 92

Length = 272

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 53.3 bits (128), Expect = 1e-09
 Identities = 29/100 (29%), Positives = 56/100 (56%), Gaps = 5/100 (5%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           LN+++++VTGAS G+GRE  L  A+ G  ++   R  ++L+ + D IN+ G        +
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGR----QPQ 57

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
              ++L  C      +++ + A   + R+D +++NAG+ G
Sbjct: 58  WFILDLLTCTSENCQQLAQRIAVN-YPRLDGVLHNAGLLG 96

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 53.4 bits (129), Expect = 1e-09
 Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 9/99 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  KVV+VTGA+ G+G E    L   G ++         L +L  E      +G  D  
Sbjct: 6   SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAE------LGGDD-- 57

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           R + V  DV  D A ++ + ++A E FG +D +V NAGI
Sbjct: 58  RVLTVVADVT-DLAAMQAAAEEAVERFGGIDVVVANAGI 95

Length = 296

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 53.0 bits (128), Expect = 1e-09
 Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 28/105 (26%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
              +VTGA+ G+G+ +  +LAK G  ++  +R  ++L ++  EI +   V      + +A
Sbjct: 2   TWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGV----ETKTIA 57

Query: 78  VELDVCADG----------ATIEISVQKAWEAFGRVDALVNNAGI 112
              D  A              ++I +            LVNN GI
Sbjct: 58  A--DFSAGDDIYERIEKELEGLDIGI------------LVNNVGI 88

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 53.2 bits (128), Expect = 1e-09
 Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 9/98 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  +V +VTGA SG+GR      A+ G R+V A R  +  + +   I   G        
Sbjct: 2   RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGG-------- 53

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           RA A + DV      +E  V      +GR+D LVNNAG
Sbjct: 54  RAFARQGDV-GSAEAVEALVDFVAARWGRLDVLVNNAG 90

Length = 252

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 53.2 bits (128), Expect = 1e-09
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 13/99 (13%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKPGMVGSPDS 72
            ++E+ V+VTG S GLG       A+ G R+V    +  D  ++L DE+           
Sbjct: 2   QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGD--------- 52

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGR-VDALVNNA 110
            RA+A++ DV  D   ++     A E FG+ +  +VNNA
Sbjct: 53  -RAIALQADV-TDREQVQAMFATATEHFGKPITTVVNNA 89

Length = 253

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 53.0 bits (127), Expect = 1e-09
 Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 4/97 (4%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L++K ++VTGAS GLG +     A AG  ++  AR   +L+ + D I +    G P+   
Sbjct: 4   LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVE---AGHPEPF- 59

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           A+  +L    +    + +   A    G++D +V+ AG
Sbjct: 60  AIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAG 96

Length = 239

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 52.7 bits (127), Expect = 2e-09
 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 8/98 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           DL  K+ +VTGAS G+G      LA+ G  ++ ++R++D  +++ D I   G  G  +++
Sbjct: 5   DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAG--GKAEAL 62

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
                E++       I+       E  GR+D LVNNA 
Sbjct: 63  ACHIGEME------QIDALFAHIRERHGRLDILVNNAA 94

Length = 252

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 52.8 bits (127), Expect = 2e-09
 Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAA-RRVDRLKSLCDEINKPGMVGSPDSVRAV 76
           KV +VTG++SG+G      LA AG  IV         ++++   +       +   V+ +
Sbjct: 3   KVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLA------AKHGVKVL 56

Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIR 113
               D+ +  A IE  V  A   FG VD LVNNAGI+
Sbjct: 57  YHGADL-SKPAAIEDMVAYAQRQFGGVDILVNNAGIQ 92

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 52.6 bits (127), Expect = 2e-09
 Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 22/116 (18%)

Query: 8   HLEPWHD-LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGM 66
           H +P  D L +++++VTGA  G+GRE  L  A+ G  ++   R  ++L+++ DEI   G 
Sbjct: 2   HYQPKPDLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG- 60

Query: 67  VGSPDSVRAVAVELDV-------CADGA-TIEISVQKAWEAFGRVDALVNNAGIRG 114
                  +   + LD+           A TIE       E FGR+D +++NAG+ G
Sbjct: 61  -----GPQPAIIPLDLLTATPQNYQQLADTIE-------EQFGRLDGVLHNAGLLG 104

Length = 247

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 52.6 bits (127), Expect = 2e-09
 Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 8/94 (8%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVGSPDSVRAV 76
           KV ++TG +  +G      L  AG R+     R      +L  E+N       P S  A+
Sbjct: 7   KVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNA----LRPGSAAAL 62

Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
             +L    D   +   V     AFGR+DALVNNA
Sbjct: 63  QADL---LDPDALPELVAACVAAFGRLDALVNNA 93

Length = 249

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 52.3 bits (126), Expect = 2e-09
 Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 17/101 (16%)

Query: 12  WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPD 71
           W +L  K+++VTG SSG+G     +L   G  +V A            +I+     G   
Sbjct: 4   WLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNA------------DIHG----GDGQ 47

Query: 72  SVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                 V  DV +    +  +V +  E FGR+D LVNNAGI
Sbjct: 48  HENYQFVPTDV-SSAEEVNHTVAEIIEKFGRIDGLVNNAGI 87

Length = 266

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 52.5 bits (126), Expect = 3e-09
 Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 9/92 (9%)

Query: 20  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVE 79
           V+VT +S G+G     +L K G R+V ++R  + L+    E+ + G V         AV+
Sbjct: 3   VLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEV--------YAVK 54

Query: 80  LDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
            D+  D   ++  V++AWE  G +DALV NAG
Sbjct: 55  ADLS-DKDDLKNLVKEAWELLGGIDALVWNAG 85

Length = 259

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 52.3 bits (126), Expect = 3e-09
 Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 11/95 (11%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           KVV+VTGA+ G+GR   L  A  G R+V    R + +  +  E+   G         A+A
Sbjct: 9   KVVVVTGAAQGIGRGVALRAAAEGARVV-LVDRSELVHEVAAELRAAG-------GEALA 60

Query: 78  VELDVCA-DGATIEISVQKAWEAFGRVDALVNNAG 111
           +  D+    GA  + ++  A EAFGR+D L+NN G
Sbjct: 61  LTADLETYAGA--QAAMAAAVEAFGRIDVLINNVG 93

Length = 260

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 52.4 bits (126), Expect = 3e-09
 Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 8/95 (8%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           KV +VTGA  G+G      L + G ++       +  ++  D+++K G        +A+A
Sbjct: 3   KVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGG-------KAIA 55

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           V+ DV +D   +  +V++  + FG ++ +VNNAG+
Sbjct: 56  VKADV-SDRDQVFAAVRQVVDTFGDLNVVVNNAGV 89

Length = 256

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 52.1 bits (125), Expect = 3e-09
 Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 11/94 (11%)

Query: 19  VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAV 78
           +V+VTGA++G G        + G +++A  RR +RL+ L DE+         D++     
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG--------DNL--YIA 51

Query: 79  ELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +LDV  + A IE  +      +  +D LVNNAG+
Sbjct: 52  QLDV-RNRAAIEEMLASLPAEWRNIDVLVNNAGL 84

Length = 248

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 52.1 bits (125), Expect = 4e-09
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 12/94 (12%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
           +VV+VTGAS GLG       A+ G R +V   R  +  +++  E  +          RA+
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGE----------RAI 50

Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
           A++ DV  D   ++  +++A   FG VD +VNNA
Sbjct: 51  AIQADV-RDRDQVQAMIEEAKNHFGPVDTIVNNA 83

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 51.4 bits (123), Expect = 5e-09
 Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 9/97 (9%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
              KVV+VTGA+ G+GR     LA  G R++   R  + +  +  EI     + + D+  
Sbjct: 2   FEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRS-ELVHEVLAEI-----LAAGDAAH 55

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
               +L+  A     +  V+ A E FGRVD L+NN G
Sbjct: 56  VHTADLETYAGA---QGVVRAAVERFGRVDVLINNVG 89

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 51.4 bits (123), Expect = 6e-09
 Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 7/94 (7%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           KVV+VTG S G+GR       + G ++V  AR     ++L  E+N+ G            
Sbjct: 10  KVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGS------CKF 63

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           V  DV  +   I+  +    E FGR+D LVNNAG
Sbjct: 64  VPCDVTKE-EDIKTLISVTVERFGRIDCLVNNAG 96

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 51.3 bits (123), Expect = 6e-09
 Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 8/101 (7%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
             + KV +VTG ++G+GR   L  A+ G ++V A R     +     I + G        
Sbjct: 4   TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGG------- 56

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
            A+ V  DV  D A ++  V++   A+GR+D   NNAGI  
Sbjct: 57  EALFVACDVTRD-AEVKALVEQTIAAYGRLDYAFNNAGIEI 96

Length = 253

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 51.7 bits (124), Expect = 6e-09
 Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 16/103 (15%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIV----AAARRVDRLKSLCDEINKPGMVGS 69
           DL+ KV +VTGA++GLGR   L LA+ G  +V    A+A        + DEI   G    
Sbjct: 9   DLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDAS---DVLDEIRAAG---- 61

Query: 70  PDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               +AVAV  D+ +  AT +  V  A    G +D +VNNAGI
Sbjct: 62  ---AKAVAVAGDI-SQRATADELVATA-VGLGGLDIVVNNAGI 99

Length = 306

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 51.5 bits (124), Expect = 6e-09
 Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 11/97 (11%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  KV +VTG ++ +G      L  AG R+       D   ++   + +          
Sbjct: 3   GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGE---------- 52

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
           RA  +  D+  D A IE +V      FGRVD LVN A
Sbjct: 53  RARFIATDI-TDDAAIERAVATVVARFGRVDILVNLA 88

Length = 261

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 6e-09
 Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 8/100 (8%)

Query: 13  HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDS 72
             L+  VV++TGASSG+G+      A+ G R+V AAR  + L+++ +E    G       
Sbjct: 3   GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALG------- 55

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
              + V  DV  D   ++    +A    GR+D  VNN G+
Sbjct: 56  AEVLVVPTDV-TDADQVKALATQAASFGGRIDVWVNNVGV 94

Length = 330

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 51.3 bits (123), Expect = 6e-09
 Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 16/96 (16%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
           K V+VTGA+ G+G+ F   L   G  ++ AA R       L  +             + V
Sbjct: 4   KTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAK----------YGDKVV 53

Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            + LDV  D  +I+ +  +A +    VD ++NNAG+
Sbjct: 54  PLRLDV-TDPESIKAAAAQAKD----VDVVINNAGV 84

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 51.1 bits (123), Expect = 7e-09
 Identities = 26/103 (25%), Positives = 37/103 (35%), Gaps = 22/103 (21%)

Query: 20  VMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAV 78
           V++TGAS G+G E    L   G   ++A  R       L                R   +
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAAL--------GASHSRLHIL 52

Query: 79  ELDV------CADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
           ELDV       A+     +           +D L+NNAGI  +
Sbjct: 53  ELDVTDEIAESAEAVAERLGDAG-------LDVLINNAGILHS 88

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 50.9 bits (122), Expect = 7e-09
 Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 15/103 (14%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD---RLK----SLCDEINKPGMV 67
           L  K + +TGAS G+G+   L  A+ G  +V AA+  +   +L     +  +EI   G  
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGG- 59

Query: 68  GSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
                 +A+   +D+  D   +  +V+KA E FG +D LVNNA
Sbjct: 60  ------KALPCIVDI-RDEDQVRAAVEKAVEKFGGIDILVNNA 95

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 51.1 bits (123), Expect = 8e-09
 Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 14/99 (14%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           + +++TGASSGLG     + A  G  +   ARR DRL+ L  E+    +   P  ++   
Sbjct: 3   QKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAEL----LARYPG-IKVAV 57

Query: 78  VELDVCADGATIEISVQKAWEAF----GRVDALVNNAGI 112
             LDV          V + +  F    G +D ++ NAGI
Sbjct: 58  AALDV-----NDHDQVFEVFAEFRDELGGLDRVIVNAGI 91

Length = 248

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 50.8 bits (122), Expect = 1e-08
 Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 10/101 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L+   V+VTG +SG+GR      A+AG R+         L +    +  PG        
Sbjct: 8   PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARL--PGAK------ 59

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
              A   DV AD A +E     A E FG +D LVNNAGI G
Sbjct: 60  -VTATVADV-ADPAQVERVFDTAVERFGGLDVLVNNAGIAG 98

Length = 264

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 50.6 bits (121), Expect = 1e-08
 Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 8/93 (8%)

Query: 19  VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAV 78
           V +VTG ++G+G+     LAKAG  +V A  + +  +++   I + G        +A+ +
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGG-------QAIGL 53

Query: 79  ELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           E +V ++   +E  V+     FG +  LVNNAG
Sbjct: 54  ECNVTSE-QDLEAVVKATVSQFGGITILVNNAG 85

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 50.4 bits (121), Expect = 1e-08
 Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 8/93 (8%)

Query: 20  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVE 79
           V+VTGA+ G+G      LA+AG R+ A  R  ++L  L  ++ + G             +
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYG-------YPFATYK 53

Query: 80  LDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           LDV AD A ++  VQ+    +G +D LVN AGI
Sbjct: 54  LDV-ADSAAVDEVVQRLEREYGPIDVLVNVAGI 85

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 50.5 bits (121), Expect = 1e-08
 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 8/100 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  +V +VTG++ GLG E    LA AG  ++   R    L++    +   G        
Sbjct: 8   SLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGG------- 60

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIR 113
            A A+  D+  D   +  +  +     GR+D LVNN G R
Sbjct: 61  AAEALAFDIA-DEEAVAAAFARIDAEHGRLDILVNNVGAR 99

Length = 256

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 50.0 bits (120), Expect = 2e-08
 Identities = 32/98 (32%), Positives = 41/98 (41%), Gaps = 6/98 (6%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  +V +VTG SSG+G      L +AG  +    R  +RL S    +            
Sbjct: 5   QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARL-----REKFPGA 59

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           R +A   DV  D A +          FG VD LVNNAG
Sbjct: 60  RLLAARCDV-LDEADVAAFAAAVEARFGGVDMLVNNAG 96

Length = 265

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 50.0 bits (120), Expect = 2e-08
 Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 8/93 (8%)

Query: 20  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVE 79
           VM+TGA+SGLGR   L  A+ G R+  A    +  +     + + G              
Sbjct: 3   VMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGG-------DGFYQR 55

Query: 80  LDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            DV  D + +    Q   E +G +D +VNNAG+
Sbjct: 56  CDV-RDYSQLTALAQACEEKWGGIDVIVNNAGV 87

Length = 270

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 50.0 bits (120), Expect = 2e-08
 Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 11/99 (11%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           DL+ KV +VTG +SG+G       A  G R+    R  D  +                  
Sbjct: 12  DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQL----------LGG 61

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            A  +  DV +D  ++E +V     AFGR+D LVN+AG+
Sbjct: 62  NAKGLVCDV-SDSQSVEAAVAAVISAFGRIDILVNSAGV 99

Length = 255

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 49.9 bits (119), Expect = 2e-08
 Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 18/103 (17%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           DLN KV ++TG ++GLG+   + LAKAG  IV               +       +   V
Sbjct: 5   DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVG--------------VGVAEAPETQAQV 50

Query: 74  RAVAVELDVCA----DGATIEISVQKAWEAFGRVDALVNNAGI 112
            A+  +             I+  V +A E  G +D L+NNAGI
Sbjct: 51  EALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGI 93

Length = 251

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 49.5 bits (119), Expect = 2e-08
 Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 17/95 (17%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
              ++TGAS G+G     +LA     ++   R  +RL  L  E+                
Sbjct: 4   PTALITGASRGIGAAIARELAPTH-TLLLGGRPAERLDELAAEL---------PGATPFP 53

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           V+L    D   I      A E  GR+D LV+NAG+
Sbjct: 54  VDL---TDPEAIA----AAVEQLGRLDVLVHNAGV 81

Length = 227

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 49.7 bits (119), Expect = 2e-08
 Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 11/99 (11%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  +V ++TG  SGLGR         G ++    R  +++  L  +          D+V
Sbjct: 1   WLKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFG--------DAV 52

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             V VE DV    A  E +V +  E FG++D  + NAGI
Sbjct: 53  --VGVEGDV-RSLADNERAVARCVERFGKLDCFIGNAGI 88

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 49.9 bits (119), Expect = 2e-08
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 10/99 (10%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  KV +VTG  +GLG+   L LA+AGC IV        +    + I +   +G     
Sbjct: 7   SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGI-----NIVEPTETIEQVTALGR---- 57

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           R +++  D+        + +++A   FG +D LVNNAG+
Sbjct: 58  RFLSLTADLRKIDGIPAL-LERAVAEFGHIDILVNNAGL 95

Length = 253

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 49.3 bits (118), Expect = 3e-08
 Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 12/93 (12%)

Query: 20  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVE 79
           +++TG +SG+G        + G  ++   R  +RL     E   P +             
Sbjct: 8   ILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN--PEIHT---------EV 56

Query: 80  LDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            DV AD  +    V+   + +  ++ L+NNAGI
Sbjct: 57  CDV-ADRDSRRELVEWLKKEYPNLNVLINNAGI 88

Length = 245

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 49.4 bits (118), Expect = 3e-08
 Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 11/97 (11%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC--DEINKPGMVGSPDSVRA 75
           K+ +VTGA  G+G     +L   G R++A         + C  D   + G   + D VR 
Sbjct: 3   KIALVTGAKRGIGSAIARELLNDGYRVIAT----YFSGNDCAKDWFEEYGF--TEDQVR- 55

Query: 76  VAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
              ELDV  D      ++ +  E  G VD LVNNAGI
Sbjct: 56  -LKELDVT-DTEECAEALAEIEEEEGPVDILVNNAGI 90

Length = 245

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 49.4 bits (118), Expect = 3e-08
 Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 9/100 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-LKSLCDEINKPGMVGSPDS 72
           DL+ +V  VTGA SG+G+   + LA+AG  +     R D  L    + I   G       
Sbjct: 5   DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGR------ 58

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            RA+ +  DV    A +  +V +     G +   VN AGI
Sbjct: 59  -RAIQIAADV-TSKADLRAAVARTEAELGALTLAVNAAGI 96

Length = 254

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 49.4 bits (118), Expect = 3e-08
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 14/94 (14%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
            VV++TG SSG+GR        AG  + A AR+ + +++L       G           A
Sbjct: 2   PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL----AAAGF---------TA 48

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           V+LDV  DGA +    ++     G +D L+NNAG
Sbjct: 49  VQLDV-NDGAALARLAEELEAEHGGLDVLINNAG 81

Length = 274

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 49.0 bits (117), Expect = 4e-08
 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 11/95 (11%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           KV +VTGA +G+G      LA+ G R+V A       +++  +I          +  A+A
Sbjct: 4   KVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQI----------AGGALA 53

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           + +DV  D   +    ++A E FG +D LVNNAG 
Sbjct: 54  LRVDV-TDEQQVAALFERAVEEFGGLDLLVNNAGA 87

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 49.0 bits (117), Expect = 4e-08
 Identities = 39/99 (39%), Positives = 48/99 (48%), Gaps = 9/99 (9%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDSV 73
           L+ KV +VTGAS G+G      LA  G  +    A        L  EI   G        
Sbjct: 3   LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGG------- 55

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           RA+AV+ DV AD A +      A  AFGR+D LVNNAG+
Sbjct: 56  RAIAVQADV-ADAAAVTRLFDAAETAFGRIDVLVNNAGV 93

Length = 245

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 48.9 bits (117), Expect = 5e-08
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 11/104 (10%)

Query: 18  KVVMVTGASSGLGREFC-----LDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDS 72
           KVV+VTGA+SGLG   C      D       ++ A R + R ++ C  +    +   PD+
Sbjct: 2   KVVLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRAL----LASHPDA 57

Query: 73  VRAVAVE-LDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
                   +D+ ++  ++  + ++  + + R+D L  NAGI  N
Sbjct: 58  RVVFDYVLVDL-SNMVSVFAAAKELKKRYPRLDYLYLNAGIMPN 100

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 48.8 bits (117), Expect = 5e-08
 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 9/93 (9%)

Query: 20  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVE 79
           V +TGASSG+G+    + A+ G  +   ARR D L++    +        P + R     
Sbjct: 5   VFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARL--------PKAARVSVYA 56

Query: 80  LDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            DV  D   +  +      A G  D ++ NAGI
Sbjct: 57  ADVR-DADALAAAAADFIAAHGLPDVVIANAGI 88

Length = 257

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 48.3 bits (115), Expect = 6e-08
 Identities = 32/100 (32%), Positives = 39/100 (39%), Gaps = 10/100 (10%)

Query: 13  HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDS 72
           H L  KVV +TG   GLGR     LA  G R+    R    L             G P  
Sbjct: 3   HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLP--------GVPAD 54

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                  +D+    A    +V +    FGR+DALVN AG 
Sbjct: 55  -ALRIGGIDLVDPQAARR-AVDEVNRQFGRLDALVNIAGA 92

Length = 239

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 48.3 bits (115), Expect = 6e-08
 Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 11/95 (11%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           K  +VTGAS G+G      L   G R+   AR   RL +   +    G++G    VR   
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQE-LEGVLGLAGDVR--- 56

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                  D A +  +V    EAFG +DALVNNAG+
Sbjct: 57  -------DEADVRRAVDAMEEAFGGLDALVNNAGV 84

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 48.4 bits (116), Expect = 7e-08
 Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 11/96 (11%)

Query: 19  VVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
           V+++TGAS G+GR    +L K G    +V  AR  + L+ L +E+           V  V
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELR------PGLRVTTV 54

Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             +L   A    +  +++K     G  D L+NNAG 
Sbjct: 55  KADLSDAAGVEQLLEAIRKLD---GERDLLINNAGS 87

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 48.4 bits (116), Expect = 8e-08
 Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 9/96 (9%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
           +  +VTGA+  +GR   LDLA  G  + V   R  D  ++L  EI   G        RAV
Sbjct: 10  RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALG-------RRAV 62

Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           A++ D+  +     + V +A  A G +  LVNNA +
Sbjct: 63  ALQADLADEAEVRAL-VARASAALGPITLLVNNASL 97

Length = 258

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 47.8 bits (114), Expect = 1e-07
 Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 17/99 (17%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           KV +VTG +SG+G      LA  G  +V A         +  EI +     +    RA+ 
Sbjct: 2   KVALVTGGASGIGLAIAKRLAAEGAAVVVA--------DIDPEIAEKVAEAAQGGPRALG 53

Query: 78  VELDVCADGATIEISVQKAWE----AFGRVDALVNNAGI 112
           V+ DV     T E  VQ A+E     FG +D +V+NAGI
Sbjct: 54  VQCDV-----TSEAQVQSAFEQAVLEFGGLDIVVSNAGI 87

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 47.7 bits (114), Expect = 1e-07
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
           +V +VT + SG+G+   L LA+ G  I +      +  K   +E+   G       VRA 
Sbjct: 3   QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHG-------VRAE 55

Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
             +LD+ +D      ++ K  +  GR+D LVNNAG
Sbjct: 56  IRQLDL-SDLPEGAQALDKLIQRLGRIDVLVNNAG 89

Length = 256

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 47.6 bits (113), Expect = 1e-07
 Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 11/98 (11%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L+ K  ++TG++ G+GR F     + G R+  A   ++  ++   EI             
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGP----------A 50

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           A A+ LDV  D A+I+  V    + +G +D LVNNA +
Sbjct: 51  ACAISLDV-TDQASIDRCVAALVDRWGSIDILVNNAAL 87

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 47.4 bits (113), Expect = 2e-07
 Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 8/99 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  K+ ++TGAS G+G       AKAG  IV      + +        + G       +
Sbjct: 7   SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELG-------I 59

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            A     DV  D   ++  V +  +  G +D LVNNAGI
Sbjct: 60  EAHGYVCDV-TDEDGVQAMVSQIEKEVGVIDILVNNAGI 97

Length = 265

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 47.3 bits (113), Expect = 2e-07
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 9/92 (9%)

Query: 20  VMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVGSPDSVRAVAV 78
            +VTG S G+G+   L LA+ G  +V   R+  D    +  EI + G        +AV V
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELG-------GKAVVV 53

Query: 79  ELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
             DV +    +E       E FGR+D LV+NA
Sbjct: 54  RADV-SQPQDVEEMFAAVKERFGRLDVLVSNA 84

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 47.1 bits (112), Expect = 2e-07
 Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 10/94 (10%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           +  +VTGA+ G+G+        AG R++A       L +  D +            R V 
Sbjct: 3   RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDA---------RFVP 53

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           V  D+  D A++  ++  A    G VD LV NAG
Sbjct: 54  VACDL-TDAASLAAALANAAAERGPVDVLVANAG 86

Length = 257

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 46.8 bits (111), Expect = 2e-07
 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 19/99 (19%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAA----ARRVDRLKSLCDEINKPGMVGSPDSV 73
           KV +VTG   G+G++ CLD  +AG ++V A     R  D  ++             P+  
Sbjct: 2   KVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAE-----------GPN-- 48

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               V  DV AD   ++  V    E  GR+D LVNNA  
Sbjct: 49  -LFFVHGDV-ADETLVKFVVYAMLEKLGRIDVLVNNAAR 85

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 47.1 bits (112), Expect = 2e-07
 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 9/98 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            +  K+V+VTG S G+GR       +AG R++ +AR+ +      +E++  G        
Sbjct: 3   SVAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYG-------- 54

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
             +A+  D+ ++   IE  V +  E   R+D LVNNAG
Sbjct: 55  ECIAIPADLSSEEG-IEALVARVAERSDRLDVLVNNAG 91

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 47.0 bits (112), Expect = 2e-07
 Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 11/98 (11%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  K V++TGAS G+G       A  GC +   AR  D L++L  +      + +   V
Sbjct: 4   HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAAD------LRAAHGV 57

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
                 LD+ +  A      ++     G +D LVNNAG
Sbjct: 58  DVAVHALDLSSPEA-----REQLAAEAGDIDILVNNAG 90

Length = 259

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 46.6 bits (110), Expect = 3e-07
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 8/99 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           DL+ K  ++TGAS+G+G+   L   +AG ++  AAR +D L+ L DEI   G        
Sbjct: 6   DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGG------- 58

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           + V V  DV +    +   + +     G +D  V NAGI
Sbjct: 59  KVVPVCCDV-SQHQQVTSMLDQVTAELGGIDIAVCNAGI 96

Length = 253

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 46.6 bits (111), Expect = 3e-07
 Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 15/103 (14%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIV----AAARRVDRLKSLCDEINKPGMVGS 69
            L  KV +VTG S G+G      LA+AG  +     +A R  ++ + L  +         
Sbjct: 5   SLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYG------- 57

Query: 70  PDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
              V+  A + DV +   ++E + ++  + FG++D L+ NAGI
Sbjct: 58  ---VKTKAYKCDV-SSQESVEKTFKQIQKDFGKIDILIANAGI 96

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 46.5 bits (111), Expect = 4e-07
 Identities = 29/99 (29%), Positives = 38/99 (38%), Gaps = 12/99 (12%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           DL  KVV +TG + G+G      LA  G R+          K    E+            
Sbjct: 2   DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----------- 50

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             V   LDV  D A+    +       G +D LVNNAG+
Sbjct: 51  LVVGGPLDV-TDPASFAAFLDAVEADLGPIDVLVNNAGV 88

Length = 273

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 45.8 bits (109), Expect = 5e-07
 Identities = 28/95 (29%), Positives = 38/95 (40%), Gaps = 7/95 (7%)

Query: 19  VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAV 78
           V  V GA  GLG       A  G  +  AARR  +L++L  +I +     +     A AV
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIR----DAGG--SAKAV 54

Query: 79  ELDVCADGATIEISVQKAWEAFGRVDALVNNAGIR 113
             D   D   +        E  G ++ LV NAG  
Sbjct: 55  PTDA-RDEDEVIALFDLIEEEIGPLEVLVYNAGAN 88

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 45.9 bits (109), Expect = 6e-07
 Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 9/99 (9%)

Query: 13  HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKPGMVGSPD 71
            DL  K  +VTG+S G+G +    LA AG  +V   R +  R   +  EI   G      
Sbjct: 2   GDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAG------ 55

Query: 72  SVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
             RA AV  D+  D  ++   +  A E FG +DALV NA
Sbjct: 56  -GRASAVGADL-TDEESVAALMDTAREEFGGLDALVLNA 92

Length = 248

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 45.8 bits (108), Expect = 6e-07
 Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 9/99 (9%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKPGMVGSPDSV 73
           LN KV +VTG + G+G+   + LA+ G ++V       +  ++L +E+ K G        
Sbjct: 4   LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGH------- 56

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
              AV+ DV        + V++A   FG+VD LVNNAGI
Sbjct: 57  DVYAVQADVSKVEDANRL-VEEAVNHFGKVDILVNNAGI 94

Length = 247

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 45.7 bits (109), Expect = 6e-07
 Identities = 30/98 (30%), Positives = 38/98 (38%), Gaps = 16/98 (16%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           DL  +VV+VTG + G+G         AG  +V   RR                  + D  
Sbjct: 3   DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE---------------TVDGR 47

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
            A     DV  D   +   V    E  GR+D LVNNAG
Sbjct: 48  PAEFHAADV-RDPDQVAALVDAIVERHGRLDVLVNNAG 84

Length = 252

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 45.6 bits (109), Expect = 7e-07
 Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 17/99 (17%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           D + K V VTGA+ G+G    L   +AG +++   +     +                  
Sbjct: 5   DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQEDY---------------- 48

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                 LDV +D A +    Q+     G +D LVN AGI
Sbjct: 49  PFATFVLDV-SDAAAVAQVCQRLLAETGPLDVLVNAAGI 86

Length = 252

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 45.7 bits (108), Expect = 7e-07
 Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 8/97 (8%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L +K  +VTG   G+G   C   A+ G ++       +  + +  +I   G      + +
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKG-----GNAQ 55

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           A A ++    D  +++ +V  A +A G VD LVNNAG
Sbjct: 56  AFACDI---TDRDSVDTAVAAAEQALGPVDVLVNNAG 89

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 45.2 bits (107), Expect = 9e-07
 Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 11/98 (11%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  +VV+VTG +SGLGR         G R+    +    L+ L             D+V 
Sbjct: 3   LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQEL--------EAAHGDAVV 54

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            V  ++    D      +V +   AFG++D L+ NAGI
Sbjct: 55  GVEGDVRSLDDHKE---AVARCVAAFGKIDCLIPNAGI 89

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 45.1 bits (107), Expect = 1e-06
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L+ + V++TG S GLGR   + LA  G  ++       R ++  D +   G+  +     
Sbjct: 4   LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAA-GIEAAGGKAL 62

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            +A ++    D A    ++    E FGR+D LVNNAGI
Sbjct: 63  GLAFDVR---DFAATRAALDAGVEEFGRLDILVNNAGI 97

Length = 249

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 45.1 bits (107), Expect = 1e-06
 Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 13/98 (13%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  +V ++TG  SG+G      LA  G  +V      +  K+  DE+             
Sbjct: 5   LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG------------ 52

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            + V  DV  D   +      A E +G VD   NNAGI
Sbjct: 53  GLFVPTDVT-DEDAVNALFDTAAETYGSVDIAFNNAGI 89

Length = 255

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 19/99 (19%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVA----AARRVDRLKSLCDEINKPGMVGSPDSV 73
           KV +VTGA+ G+G      LA+ G  +V     AA   + L ++ + +            
Sbjct: 211 KVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG--EALAAVANRVG----------- 257

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
              A+ LD+ A  A   I  +   E  G +D +V+NAGI
Sbjct: 258 -GTALALDITAPDAPARI-AEHLAERHGGLDIVVHNAGI 294

Length = 450

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 45.0 bits (107), Expect = 1e-06
 Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 29/108 (26%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA-----------ARRVDRLKSLCDEINK 63
           L  KV ++TG  SG+GR   +  AK G  I               +RV++          
Sbjct: 44  LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEK---------- 93

Query: 64  PGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
                  + V+ + +  DV  D A  + +V++     GR+D LVNNA 
Sbjct: 94  -------EGVKCLLIPGDVS-DEAFCKDAVEETVRELGRLDILVNNAA 133

Length = 290

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 44.7 bits (106), Expect = 1e-06
 Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 8/99 (8%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  K +++TG++ G+G      LA+ G  I+      +R +    ++ + G+       +
Sbjct: 7   LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGI-------K 59

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIR 113
           A A   +V      +E +++   +  G +D L+NNAGI+
Sbjct: 60  AHAAPFNV-THKQEVEAAIEHIEKDIGPIDVLINNAGIQ 97

Length = 254

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 44.5 bits (106), Expect = 1e-06
 Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 17/99 (17%)

Query: 13  HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDS 72
            +L  K  +VTG + G+G      L +AG R+V  AR            ++P     P+ 
Sbjct: 5   LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTAR------------SRPD--DLPEG 50

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           V  VA +L      A +    +   E  G VD LV+  G
Sbjct: 51  VEFVAADLTTAEGCAAV---ARAVLERLGGVDILVHVLG 86

Length = 260

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 44.6 bits (106), Expect = 2e-06
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 32/110 (29%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA--------ARRVDRLKSLCDEINKPGM 66
           L  K  ++TG  SG+GR   +  A+ G  +           A    +L      I + G 
Sbjct: 24  LKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKL------IEEEG- 76

Query: 67  VGSPDSVRAVAVELDV-----CADGATIEISVQKAWEAFGRVDALVNNAG 111
                  + + +  D+     C D       V++  + FG++D LVNNA 
Sbjct: 77  ------RKCLLIPGDLGDESFCRD------LVKEVVKEFGKLDILVNNAA 114

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 44.4 bits (105), Expect = 2e-06
 Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 9/96 (9%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
           KV+++TGAS G+G    L  A+ G  + +   R  D  +++   I + G         A+
Sbjct: 3   KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQG-------GEAL 55

Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           AV  DV AD A +    +      GR+DALVNNAGI
Sbjct: 56  AVAADV-ADEADVLRLFEAVDRELGRLDALVNNAGI 90

Length = 248

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 44.1 bits (104), Expect = 2e-06
 Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 11/99 (11%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           DL+ +  +VTGAS G+G E    L   G  +     RV++L++L  E+         + V
Sbjct: 3   DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELG--------ERV 54

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +     L   +D   ++   QKA      VD LVNNAGI
Sbjct: 55  KIFPANL---SDRDEVKALGQKAEADLEGVDILVNNAGI 90

Length = 245

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 44.1 bits (104), Expect = 3e-06
 Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 10/94 (10%)

Query: 21  MVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVEL 80
           +VTG + G+G+ F   LA+ G  +V  AR  D+LK + D I            +   V +
Sbjct: 57  LVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQS-----KYSKTQIKTVVV 111

Query: 81  DVCADGATIEISVQKAWEAFGRVDA--LVNNAGI 112
           D   D   I+  V++  E    +D   L+NN G+
Sbjct: 112 DFSGD---IDEGVKRIKETIEGLDVGVLINNVGV 142

Length = 320

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 43.4 bits (103), Expect = 4e-06
 Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 8/97 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           D   K V+V G +SG+        A+AG  +  A+R  +++ +   ++ + G        
Sbjct: 6   DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAG-------P 58

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
             + V  DV  D A +E +  +  + FG +D LV+ A
Sbjct: 59  EGLGVSADV-RDYAAVEAAFAQIADEFGPIDVLVSGA 94

Length = 264

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 43.2 bits (102), Expect = 4e-06
 Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 31/104 (29%)

Query: 17  EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR---VDRLKSLCDEINKPGMVG----- 68
           +K V++TG SSG+G E  L+L + G R++AA R+   V R+ SL       G  G     
Sbjct: 2   QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSL-------GFTGILLDL 54

Query: 69  -SPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
             P+SV   A E+    D                R+  L NNAG
Sbjct: 55  DDPESVERAADEVIALTD---------------NRLYGLFNNAG 83

Length = 256

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 43.3 bits (102), Expect = 5e-06
 Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 19/110 (17%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV- 73
           L  KV  +TGA+ G GR   + LA  G  I+A    +D    L D    P  + + + + 
Sbjct: 1   LEGKVAFITGAARGQGRAHAVRLAAEGADIIA----IDLCAPLSDYPTYP--LATREDLD 54

Query: 74  -----------RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                      + +A + DV  D A +   V+   E FGR+D +V NAG+
Sbjct: 55  ETARLVEALGRKVLARKADV-RDLAEVRAVVEDGVEQFGRLDVVVANAGV 103

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 43.2 bits (102), Expect = 6e-06
 Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 21/102 (20%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIV----AAARRVDRLKSLCDEINKPGMVGSP 70
              KV ++TG + G+GR       + G ++     +A      L+       K   VG+ 
Sbjct: 5   FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCD-VGNR 63

Query: 71  DSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           D V+     ++                + FGRVD LVNNAGI
Sbjct: 64  DQVKKSKEVVE----------------KEFGRVDVLVNNAGI 89

Length = 255

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 42.9 bits (101), Expect = 6e-06
 Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 19/99 (19%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L +KV +VTG S G+G+     L + G  ++    +                   P   
Sbjct: 3   GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIK------------------EPSYN 44

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                ++DV      I+  +      +GR+D LVNNAGI
Sbjct: 45  DVDYFKVDVSNKEQVIK-GIDYVISKYGRIDILVNNAGI 82

Length = 258

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 42.6 bits (101), Expect = 8e-06
 Identities = 32/100 (32%), Positives = 40/100 (40%), Gaps = 19/100 (19%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           K + +TGA+SG+GR   L  A  G R+ A       L +L  E+             A  
Sbjct: 2   KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAG---------NAWT 52

Query: 78  VELDVCADGATIEISVQKAWEAF-----GRVDALVNNAGI 112
             LDV    A        A   F     GR+D L NNAGI
Sbjct: 53  GALDVTDRAA-----WDAALADFAAATGGRLDVLFNNAGI 87

Length = 260

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 42.4 bits (100), Expect = 9e-06
 Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 16/103 (15%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L+ KV ++TG +SG+G       AK G R+V A    D  +++  E+      G PD   
Sbjct: 2   LDGKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAEL------GDPDISF 55

Query: 75  A---VAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
               V VE DV A       +V  A   FGR+D + NNAG+ G
Sbjct: 56  VHCDVTVEADVRA-------AVDTAVARFGRLDIMFNNAGVLG 91

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 42.4 bits (100), Expect = 1e-05
 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 11/96 (11%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           K + +TGA+SG+GRE  L  A+ G  +       D L +L  E+          +   VA
Sbjct: 1   KAIFITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAEL---------GAENVVA 51

Query: 78  VELDVCADGATIEISVQKAWEAFG-RVDALVNNAGI 112
             LDV  D A    ++     A G R+DAL NNAG+
Sbjct: 52  GALDV-TDRAAWAAALADFAAATGGRLDALFNNAGV 86

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 42.1 bits (99), Expect = 1e-05
 Identities = 35/96 (36%), Positives = 46/96 (47%), Gaps = 9/96 (9%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
           KVV++TGAS G+GR   +  A  G  + +  AR     +   D +   G        RA 
Sbjct: 3   KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGG-------RAC 55

Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            V  DV  +   I +       AFGR+DALVNNAGI
Sbjct: 56  VVAGDVANEADVIAM-FDAVQSAFGRLDALVNNAGI 90

Length = 248

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 42.0 bits (99), Expect = 1e-05
 Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 10/100 (10%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINK--PGMVGSPDS 72
           L+ +  ++TGAS G+G     +    G  ++  AR  D L    DE+ +  P        
Sbjct: 7   LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPER-----E 61

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           V  +A ++    D   I   V+  W     +  LVNNAG 
Sbjct: 62  VHGLAADVSDDEDRRAILDWVEDHW---DGLHILVNNAGG 98

Length = 257

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 41.9 bits (99), Expect = 1e-05
 Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 9/103 (8%)

Query: 15  LNEKVVMVTGAS-SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           L  KVV+VT A+ +G+G        + G R+V +     RL    DE+     +G  ++V
Sbjct: 15  LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAV 74

Query: 74  RA-VAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
              V  E  V A        +  A E  GR+D LVNNAG+ G 
Sbjct: 75  VCDVTSEAQVDA-------LIDAAVERLGRLDVLVNNAGLGGQ 110

Length = 262

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 42.0 bits (99), Expect = 1e-05
 Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 7/95 (7%)

Query: 22  VTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVEL 80
           +TGA+ GLGR     +A+ G ++ +        L +   EIN     G      A A   
Sbjct: 4   ITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGV-----AFAAVQ 58

Query: 81  DVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
           DV  +     + + +A +A G +  LVNNAG+   
Sbjct: 59  DVTDEAQWQAL-LAQAADAMGGLSVLVNNAGVGSF 92

Length = 251

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 41.6 bits (98), Expect = 2e-05
 Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 14/104 (13%)

Query: 13  HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVA-----AARRVDRLKSLCDEINKPGMV 67
           H L  KVV++ G +  LG     DLA  G + VA     AA + D  +++   +   G  
Sbjct: 4   HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETV-AAVKAAG-- 60

Query: 68  GSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
                 +AVA + D+    A +E     A  AFGR D  +N  G
Sbjct: 61  -----AKAVAFQADLTTAAA-VEKLFDDAKAAFGRPDIAINTVG 98

Length = 257

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 41.4 bits (97), Expect = 2e-05
 Identities = 16/39 (41%), Positives = 25/39 (64%)

Query: 19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL 57
           V++TGA+SG+G++  LD AK G +++A  R    L  L
Sbjct: 3  AVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDEL 41

Length = 240

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 41.3 bits (97), Expect = 3e-05
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 8/100 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           DL  +  +VTG+S G+G      LA+AG  ++   R   +L +  + +   G+       
Sbjct: 7   DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGL------- 59

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIR 113
            A A+  DV  D   +  ++       G +D LVNNAG++
Sbjct: 60  SAHALAFDV-TDHDAVRAAIDAFEAEIGPIDILVNNAGMQ 98

Length = 255

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 41.2 bits (97), Expect = 3e-05
 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 15/94 (15%)

Query: 17  EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
           ++ +++TG SSG+G      L   G R+ A  R+ + + +L  E    G+          
Sbjct: 4   KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAE----GL---------E 50

Query: 77  AVELDVCADGATIEISVQKAWE-AFGRVDALVNN 109
           A +LD  A+  +I   V +  E + GR+DAL NN
Sbjct: 51  AFQLDY-AEPESIAALVAQVLELSGGRLDALFNN 83

Length = 277

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 40.8 bits (96), Expect = 3e-05
 Identities = 27/95 (28%), Positives = 36/95 (37%), Gaps = 7/95 (7%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           K   VTGA+SG+GR   L LA  G  +    R  D L     +    G            
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALG------GTVPEH 54

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             LD+    A    +      A G +D ++N AGI
Sbjct: 55  RALDISDYDAVAAFA-ADIHAAHGSMDVVMNIAGI 88

Length = 272

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 40.9 bits (96), Expect = 4e-05
 Identities = 28/95 (29%), Positives = 39/95 (41%), Gaps = 7/95 (7%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           +V +V G    LG   C  LA+AG  +  A    +  + + DEIN      +        
Sbjct: 3   QVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGADAT 62

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            E  V A    ++       E F RVD LV +AGI
Sbjct: 63  NEQSVIALSKGVD-------EIFKRVDLLVYSAGI 90

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 40.7 bits (95), Expect = 4e-05
 Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 14/99 (14%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           KV+++TGA+SG+G E     A  G  ++ A R + R  +    I +         V A+ 
Sbjct: 2   KVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEE---WHKARVEAMT 58

Query: 78  VELDVCADGATIEISVQKAWEAFGR----VDALVNNAGI 112
           ++L      A++  SVQ+  EAF      +  LV NA +
Sbjct: 59  LDL------ASLR-SVQRFAEAFKAKNSPLHVLVCNAAV 90

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 40.7 bits (96), Expect = 4e-05
 Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 17/96 (17%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
            VV V GA+  +GR     LAK G +++   R                ++   D  + + 
Sbjct: 1   MVVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCEA---------YARRLLVMGDLGQVLF 51

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGIR 113
           VE D+  D  +I        +A    D ++N  G  
Sbjct: 52  VEFDL-RDDESIR-------KALEGSDVVINLVGRL 79

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 40.5 bits (95), Expect = 5e-05
 Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 20/98 (20%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           ++ + V+VTGA+ G+G    L LA  G +++  AR            + PG         
Sbjct: 1   MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID--------DFPG--------E 44

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             A +L   AD      ++ +  E    VDA+VNN GI
Sbjct: 45  LFACDL---ADIEQTAATLAQINEIHP-VDAIVNNVGI 78

Length = 234

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score = 40.4 bits (95), Expect = 5e-05
 Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 10/94 (10%)

Query: 20  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVE 79
           V++TGASSG+G      LAK G  ++ A R + + ++   E+  P     PDS   + ++
Sbjct: 9   VIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP-----PDSYTIIHID 63

Query: 80  LDVCADGATIEISVQKAWEAFGR-VDALVNNAGI 112
           L    D  ++   V   + A G+ +DALV NA +
Sbjct: 64  L---GDLDSVRRFV-DDFRALGKPLDALVCNAAV 93

Length = 322

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 39.8 bits (93), Expect = 8e-05
 Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 11/97 (11%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKPGMVGSPDSVRA- 75
            + +VTG S G+GR   L LA+ G  + V   + +   + + + I + G  G    ++A 
Sbjct: 2   AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAG--GKAFVLQAD 59

Query: 76  VAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           ++ E  V A    I+       +    + ALVNNAGI
Sbjct: 60  ISDENQVVAMFTAID-------QHDEPLAALVNNAGI 89

Length = 247

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 39.8 bits (93), Expect = 9e-05
 Identities = 28/93 (30%), Positives = 38/93 (40%), Gaps = 15/93 (16%)

Query: 20  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVE 79
           V+VTGA+ G+GR     L +AG  ++A                     G P         
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDL----------PFVLLLEYGDP----LRLTP 46

Query: 80  LDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           LDV AD A +     +     G +DALVN AG+
Sbjct: 47  LDV-ADAAAVREVCSRLLAEHGPIDALVNCAGV 78

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 39.8 bits (93), Expect = 1e-04
 Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 11/95 (11%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           +VV +TG + G+GR      A AG R++   R  +  K L         +G         
Sbjct: 270 RVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKL------AEALGDEHLSVQAD 323

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +      D A +E +  +    +GR+D LVNNAGI
Sbjct: 324 I-----TDEAAVESAFAQIQARWGRLDVLVNNAGI 353

Length = 520

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 39.4 bits (92), Expect = 1e-04
 Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 8/98 (8%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
             ++  +VTG  SG+G+     L  AG  ++   R  D+L +  +EI      G+     
Sbjct: 5   FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEP 64

Query: 75  A-VAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           A V  E  V         +V  A    GR+  +V+ AG
Sbjct: 65  ADVTDEDQVAR-------AVDAATAWHGRLHGVVHCAG 95

Length = 276

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 39.5 bits (92), Expect = 1e-04
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 10/103 (9%)

Query: 19  VVMVTGASSGLGREFCLDLAKA----GCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           V +VTGAS G GR    +LAK     G  +V +AR  + L+ L  EI   G   S   V 
Sbjct: 2   VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEI---GAERSGLRVV 58

Query: 75  AVAVELDVCADGATIEISVQKA--WEAFGRVDALVNNAGIRGN 115
            V+++L   A    +  ++++    +   R+  L+NNAG  G+
Sbjct: 59  RVSLDLGAEAGLEQLLKALRELPRPKGLQRL-LLINNAGTLGD 100

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 38.5 bits (89), Expect = 2e-04
 Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 25/107 (23%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVA-----AARRV---DRLKSL-CDEINKPG 65
           +++++  VTG   G+G   C  L K G ++VA     + RRV   +  K+L  D I   G
Sbjct: 1   MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEG 60

Query: 66  MVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            VG  DS +A                +  K     G +D LVNNAGI
Sbjct: 61  NVGDWDSTKA----------------AFDKVKAEVGEIDVLVNNAGI 91

Length = 246

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 38.2 bits (89), Expect = 3e-04
 Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 22/102 (21%)

Query: 16  NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRL---KSLCDEINKP--GMVGSP 70
             K + +TG+S GLG      L   G  +V  AR   R    K+ C        G + S 
Sbjct: 6   PMKRIFITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAKAACPGAAGVLIGDLSSL 65

Query: 71  DSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
              R +A +++                 A GR DA+++NAGI
Sbjct: 66  AETRKLADQVN-----------------AIGRFDAVIHNAGI 90

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 37.6 bits (87), Expect = 4e-04
 Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 8/98 (8%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  KV +VTG   G+GR   L LAK G +++      +  ++  +EI   G         
Sbjct: 14  LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLG-----GEAL 68

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            V+ +++   D   + IS+     AF R+D L  NAG+
Sbjct: 69  FVSYDMEKQGDWQRV-ISI--TLNAFSRIDMLFQNAGL 103

Length = 169

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 37.4 bits (87), Expect = 4e-04
 Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 17/95 (17%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           KV ++T A+ G+GR   L  A+ G  ++A             +IN+  +           
Sbjct: 3   KVALITAAAQGIGRAIALAFAREGANVIAT------------DINEEKLKELERGPGITT 50

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             LDV     T +  V    +  GR+D L N AG 
Sbjct: 51  RVLDV-----TDKEQVAALAKEEGRIDVLFNCAGF 80

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 37.4 bits (87), Expect = 5e-04
 Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 4/67 (5%)

Query: 18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARR---VDRLKSLCDEINKPGMVGSPDSVR 74
          K V++ GAS G+GREF       G R++A AR    +  L++L  E      V  P SV 
Sbjct: 2  KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALD-VADPASVA 60

Query: 75 AVAVELD 81
           +A +LD
Sbjct: 61 GLAWKLD 67

Length = 222

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 37.4 bits (87), Expect = 6e-04
 Identities = 31/109 (28%), Positives = 45/109 (41%), Gaps = 26/109 (23%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINK--PGM----- 66
           DL+ K  +VTGAS GLG      LA AG  ++   R   + ++    I    P       
Sbjct: 11  DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLR 70

Query: 67  ---VGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
              + S  SV A+  +L   A+G  I +              L+NNAG+
Sbjct: 71  ALDLSSLASVAALGEQL--RAEGRPIHL--------------LINNAGV 103

Length = 313

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 37.1 bits (86), Expect = 7e-04
 Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 15/116 (12%)

Query: 2   ASQVSDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI 61
            +  S    P   L  KV +VTG ++G+G        K G ++     + D  +++CD +
Sbjct: 3   TASSSASSLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSL 62

Query: 62  NKPGMVGSPDSVRA---VAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
                 G P+       V VE DV         +V    + FG +D +VNNAG+ G
Sbjct: 63  G-----GEPNVCFFHCDVTVEDDVSR-------AVDFTVDKFGTLDIMVNNAGLTG 106

Length = 280

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 37.1 bits (86), Expect = 8e-04
 Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 7/95 (7%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
             V++TGASSGLG      LA+ G   V  A R D LK+   E     +    DS   + 
Sbjct: 2   GTVVITGASSGLGLAAAKALARRGEWHVVMACR-DFLKA---EQAAQEVGMPKDSYSVLH 57

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            +L   A   ++   V         +DALV NA +
Sbjct: 58  CDL---ASLDSVRQFVDNFRRTGRPLDALVCNAAV 89

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 36.5 bits (85), Expect = 0.001
 Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 23/99 (23%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           +   K V++TGA+SG+G          G ++      VD+         KP + G+    
Sbjct: 2   EFMTKTVLITGAASGIGLAQARAFLAQGAQVYG----VDKQD-------KPDLSGN---- 46

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               ++LD+  D       ++  ++    VD L N AGI
Sbjct: 47  -FHFLQLDLSDD-------LEPLFDWVPSVDILCNTAGI 77

Length = 235

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 36.7 bits (85), Expect = 0.001
 Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 7/98 (7%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  K  +VTG + G+G     +LA  G  +   AR    L     E  + G       V 
Sbjct: 4   LEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFK-----VE 58

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               ++   ++   +  +V   +   G+++ LVNNAG 
Sbjct: 59  GSVCDVSSRSERQELMDTVASHFG--GKLNILVNNAGT 94

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 36.4 bits (85), Expect = 0.001
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 7/86 (8%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           K +++ GA+S + R      A AG R+  AAR V+RL+ L D++   G      +V    
Sbjct: 2   KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARG------AVAVST 55

Query: 78  VELDVCADGATIEISVQKAWEAFGRV 103
            ELD+  D A+    +         V
Sbjct: 56  HELDIL-DTASHAAFLDSLPALPDIV 80

Length = 243

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 36.6 bits (85), Expect = 0.001
 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 14/100 (14%)

Query: 19  VVMVTGASSGLGREFCLDLAK-AGCRIVAAARRV-----DRLKSLCDEINKPGMVGSPDS 72
           V +VTG + G+GR     LA+  G R+V   R       +        +   G       
Sbjct: 207 VYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALG------- 259

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            R + +  DV  D A +   ++K  E +G +D +++ AG+
Sbjct: 260 ARVLYISADV-TDAAAVRRLLEKVRERYGAIDGVIHAAGV 298

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 36.3 bits (84), Expect = 0.001
 Identities = 26/104 (25%), Positives = 40/104 (38%), Gaps = 23/104 (22%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINK-------PGMV 67
           L  K V + G S GLG        K G ++   +R  ++LK +   ++K        G V
Sbjct: 3   LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDV 62

Query: 68  GSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
            S +S R V                ++KA +    +D LV   G
Sbjct: 63  SSTESARNV----------------IEKAAKVLNAIDGLVVTVG 90

Length = 238

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 36.3 bits (84), Expect = 0.001
 Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 21/109 (19%)

Query: 15  LNEKVVMVTGAS--SGLGREFCLDLAKAGCRI-----VAAARRV------DRLKSLCDEI 61
           L  KV +VTG S   G+G   C +LA+AG  I      A  + +      D    L +E+
Sbjct: 4   LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEEL 63

Query: 62  NKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
            K G       V+  ++ELD+  + A  E+ + K  E  G    LVNNA
Sbjct: 64  LKNG-------VKVSSMELDLTQNDAPKEL-LNKVTEQLGYPHILVNNA 104

Length = 256

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 36.2 bits (84), Expect = 0.001
 Identities = 29/109 (26%), Positives = 40/109 (36%), Gaps = 21/109 (19%)

Query: 15  LNEKVVMVTGAS--SGLGREFCLDLAKAGCRIVA-------AARRVDRLKS----LCDEI 61
           L +K+ +VTGAS  +G+G   C  LA  G  I                       L +EI
Sbjct: 3   LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEI 62

Query: 62  NKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
              G       VR   +E+D+    A   +      E  G    L+NNA
Sbjct: 63  ESYG-------VRCEHMEIDLSQPYAPNRV-FYAVSERLGDPSILINNA 103

Length = 256

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 35.9 bits (84), Expect = 0.001
 Identities = 23/99 (23%), Positives = 37/99 (37%), Gaps = 12/99 (12%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRV---DRLKSLCDEINKPGMVGSPDSV 73
              ++TG   GLGR     LA+ G R +V  +R         +L  E+   G        
Sbjct: 1   GTYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAG-------A 53

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           R   V  DV    A   + +       G +  +++ AG+
Sbjct: 54  RVTVVACDVADRDALAAV-LAAIPAVEGPLTGVIHAAGV 91

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 36.1 bits (83), Expect = 0.002
 Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 12/97 (12%)

Query: 19  VVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVGSPDSVRA-- 75
             +VTGA+  +G    + L + G R+V    R      +L  E+N      S  + +A  
Sbjct: 3   AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNA-RRPNSAVTCQADL 61

Query: 76  --VAVELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
              A     C         +   + AFGR D LVNNA
Sbjct: 62  SNSATLFSRCEA------IIDACFRAFGRCDVLVNNA 92

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|236016 PRK07424, PRK07424, bifunctional sterol desaturase/short chain dehydrogenase; Validated

 Score = 36.2 bits (84), Expect = 0.002
 Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 18/98 (18%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  K V VTGAS  LG+    +L + G ++VA     D++    +  + P        V+
Sbjct: 176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLP--------VK 227

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            +  ++     G    ++     E   +VD L+ N GI
Sbjct: 228 TLHWQV-----GQEAALA-----ELLEKVDILIINHGI 255

Length = 406

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 35.9 bits (83), Expect = 0.002
 Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 16/100 (16%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
            VV++TG SSG+G    + LA         ++R     ++ D   K  +  +  ++    
Sbjct: 1   TVVLITGCSSGIGLHLAVRLAS------DPSKRFKVYATMRDLKKKGRLWEAAGALAGGT 54

Query: 78  VE---LDVCADGATIEISVQKAWEAF--GRVDALVNNAGI 112
           +E   LDVC        SV  A E      VD LV NAG+
Sbjct: 55  LETLQLDVCDSK-----SVAAAVERVTERHVDVLVCNAGV 89

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 35.7 bits (83), Expect = 0.002
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 21 MVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL 57
          +VTGA+  LG      L      +VA  R  ++ K+ 
Sbjct: 2  LVTGATGKLGTAVVELLLAKVASVVALVRNPEKAKAF 38

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 35.4 bits (81), Expect = 0.003
 Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 11/104 (10%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           +L+ KV +VTGAS G+GR   + LA  G  +   A    R K   DE  +       +  
Sbjct: 3   NLDGKVALVTGASRGIGRAIAMRLANDGALV---AIHYGRNKQAADETIRE---IESNGG 56

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRV-----DALVNNAGI 112
           +A  +E D+ +     ++  Q   E   RV     D LVNNAGI
Sbjct: 57  KAFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGI 100

Length = 254

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 34.9 bits (81), Expect = 0.004
 Identities = 31/102 (30%), Positives = 39/102 (38%), Gaps = 15/102 (14%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVG--SPDSVRA 75
           K V++TG  SG G      L   G  ++A           C   N PG        S R 
Sbjct: 1   KAVLITGCDSGFGNLLAKKLDSLGFTVLAG----------CLTKNGPGAKELRRVCSDRL 50

Query: 76  VAVELDVCADGATIEISVQKAWEAFGRVD--ALVNNAGIRGN 115
             ++LDV      I+ + Q   E  G      LVNNAGI G 
Sbjct: 51  RTLQLDVT-KPEQIKRAAQWVKEHVGEKGLWGLVNNAGILGF 91

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 34.8 bits (80), Expect = 0.004
 Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 22/99 (22%)

Query: 21  MVTGASSGLGREFCLDLAKAGCRIV--------AAARRVDRLKSLCDEINKPGMVGSPDS 72
           ++TGA SG+GR   +  A+ G  I           A  V +L      I   G       
Sbjct: 59  LITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQL------IQAEGRK----- 107

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
             AVA+  D+  D A     V++A +  G +D LVN AG
Sbjct: 108 --AVALPGDL-KDEAFCRQLVERAVKELGGLDILVNIAG 143

Length = 300

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	115
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.88
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.88
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.88
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.85
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.84
KOG1208	314	consensus Dehydrogenases with different specificit	99.84
PRK05854	313	short chain dehydrogenase; Provisional	99.84
PRK07478	254	short chain dehydrogenase; Provisional	99.82
PRK05867	253	short chain dehydrogenase; Provisional	99.82
KOG0725	270	consensus Reductases with broad range of substrate	99.82
PRK05876	275	short chain dehydrogenase; Provisional	99.82
PRK08589	272	short chain dehydrogenase; Validated	99.81
PRK08303	305	short chain dehydrogenase; Provisional	99.81
PRK08862	227	short chain dehydrogenase; Provisional	99.81
PRK07791	286	short chain dehydrogenase; Provisional	99.8
PRK06139	330	short chain dehydrogenase; Provisional	99.8
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.8
PRK07062	265	short chain dehydrogenase; Provisional	99.8
PRK07063	260	short chain dehydrogenase; Provisional	99.8
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.8
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.8
PRK06197	306	short chain dehydrogenase; Provisional	99.79
PLN02253	280	xanthoxin dehydrogenase	99.79
PRK06720	169	hypothetical protein; Provisional	99.79
PRK06194	287	hypothetical protein; Provisional	99.79
PRK08339	263	short chain dehydrogenase; Provisional	99.79
PRK06114	254	short chain dehydrogenase; Provisional	99.79
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.79
PRK05866	293	short chain dehydrogenase; Provisional	99.79
PRK08265	261	short chain dehydrogenase; Provisional	99.79
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.79
PRK07109	334	short chain dehydrogenase; Provisional	99.79
PRK05872	296	short chain dehydrogenase; Provisional	99.78
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.78
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.78
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.78
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.78
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.78
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.78
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.78
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.78
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.77
PRK05717	255	oxidoreductase; Validated	99.77
PRK07035	252	short chain dehydrogenase; Provisional	99.77
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.77
PRK06172	253	short chain dehydrogenase; Provisional	99.77
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.77
PRK06196	315	oxidoreductase; Provisional	99.77
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.77
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.77
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.77
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.77
PRK07890	258	short chain dehydrogenase; Provisional	99.77
PRK07774	250	short chain dehydrogenase; Provisional	99.76
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.76
PRK08643	256	acetoin reductase; Validated	99.76
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.76
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.76
PRK07814	263	short chain dehydrogenase; Provisional	99.76
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.76
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.76
PRK05599	246	hypothetical protein; Provisional	99.76
PRK07576	264	short chain dehydrogenase; Provisional	99.76
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.75
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.75
PRK08628	258	short chain dehydrogenase; Provisional	99.75
PRK08278	273	short chain dehydrogenase; Provisional	99.75
PRK09242	257	tropinone reductase; Provisional	99.75
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.75
PRK07825	273	short chain dehydrogenase; Provisional	99.75
PRK09186	256	flagellin modification protein A; Provisional	99.75
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.75
PRK07677	252	short chain dehydrogenase; Provisional	99.75
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.74
PRK08251	248	short chain dehydrogenase; Provisional	99.74
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.74
PRK12939	250	short chain dehydrogenase; Provisional	99.74
PRK06128	300	oxidoreductase; Provisional	99.74
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.74
PRK07831	262	short chain dehydrogenase; Provisional	99.74
PRK07024	257	short chain dehydrogenase; Provisional	99.74
PRK06949	258	short chain dehydrogenase; Provisional	99.73
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.73
PRK06138	252	short chain dehydrogenase; Provisional	99.73
PRK07067	257	sorbitol dehydrogenase; Provisional	99.73
PRK09134	258	short chain dehydrogenase; Provisional	99.73
PRK08226	263	short chain dehydrogenase; Provisional	99.73
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.73
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.73
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.73
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.73
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.73
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.73
PRK07454	241	short chain dehydrogenase; Provisional	99.73
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.73
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.72
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.72
PRK05855	582	short chain dehydrogenase; Validated	99.72
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.72
PRK06500	249	short chain dehydrogenase; Provisional	99.72
PRK06484	520	short chain dehydrogenase; Validated	99.71
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.71
PRK12743	256	oxidoreductase; Provisional	99.71
PRK07985	294	oxidoreductase; Provisional	99.71
PRK07856	252	short chain dehydrogenase; Provisional	99.71
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.71
PRK07806	248	short chain dehydrogenase; Provisional	99.71
PRK05650	270	short chain dehydrogenase; Provisional	99.71
PRK06398	258	aldose dehydrogenase; Validated	99.71
PRK06701	290	short chain dehydrogenase; Provisional	99.71
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.71
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.71
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.71
PRK06484	520	short chain dehydrogenase; Validated	99.71
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.71
PRK07775	274	short chain dehydrogenase; Provisional	99.71
PRK07904	253	short chain dehydrogenase; Provisional	99.7
PRK06198	260	short chain dehydrogenase; Provisional	99.7
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.7
PRK06841	255	short chain dehydrogenase; Provisional	99.7
PRK12937	245	short chain dehydrogenase; Provisional	99.7
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.7
PRK07201	657	short chain dehydrogenase; Provisional	99.7
PRK06182	273	short chain dehydrogenase; Validated	99.7
PRK09072	263	short chain dehydrogenase; Provisional	99.7
PRK06940	275	short chain dehydrogenase; Provisional	99.7
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.7
PRK06914	280	short chain dehydrogenase; Provisional	99.7
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.7
PRK12746	254	short chain dehydrogenase; Provisional	99.7
PRK06523	260	short chain dehydrogenase; Provisional	99.7
PRK06123	248	short chain dehydrogenase; Provisional	99.7
PRK05875	276	short chain dehydrogenase; Provisional	99.7
PRK08703	239	short chain dehydrogenase; Provisional	99.69
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.69
PRK06180	277	short chain dehydrogenase; Provisional	99.69
PLN00015	308	protochlorophyllide reductase	99.69
PRK12744	257	short chain dehydrogenase; Provisional	99.69
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.69
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.69
PRK08267	260	short chain dehydrogenase; Provisional	99.69
PRK07832	272	short chain dehydrogenase; Provisional	99.68
PRK06483	236	dihydromonapterin reductase; Provisional	99.68
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.68
PRK09135	249	pteridine reductase; Provisional	99.68
PRK06181	263	short chain dehydrogenase; Provisional	99.68
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.68
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.68
PRK06057	255	short chain dehydrogenase; Provisional	99.68
PRK12747	252	short chain dehydrogenase; Provisional	99.68
PRK06179	270	short chain dehydrogenase; Provisional	99.68
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.68
PRK08263	275	short chain dehydrogenase; Provisional	99.68
PRK07326	237	short chain dehydrogenase; Provisional	99.67
PLN02780	320	ketoreductase/ oxidoreductase	99.67
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.67
PRK07074	257	short chain dehydrogenase; Provisional	99.67
PRK12828	239	short chain dehydrogenase; Provisional	99.66
PRK06125	259	short chain dehydrogenase; Provisional	99.66
PRK05993	277	short chain dehydrogenase; Provisional	99.66
PRK12827	249	short chain dehydrogenase; Provisional	99.66
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.66
PRK06482	276	short chain dehydrogenase; Provisional	99.66
PRK12829	264	short chain dehydrogenase; Provisional	99.66
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.66
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.65
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.65
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.65
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.65
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.65
PRK05693	274	short chain dehydrogenase; Provisional	99.65
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.64
COG1028	251	FabG Dehydrogenases with different specificities (	99.64
PRK10538	248	malonic semialdehyde reductase; Provisional	99.63
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.63
PRK07069	251	short chain dehydrogenase; Validated	99.63
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.62
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.62
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.62
PRK08324	681	short chain dehydrogenase; Validated	99.62
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.61
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.61
PRK07102	243	short chain dehydrogenase; Provisional	99.59
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.59
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.59
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.58
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.58
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.57
PRK07060	245	short chain dehydrogenase; Provisional	99.56
PRK09291	257	short chain dehydrogenase; Provisional	99.56
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.56
PRK12742	237	oxidoreductase; Provisional	99.55
PRK08177	225	short chain dehydrogenase; Provisional	99.53
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.52
PRK12367	245	short chain dehydrogenase; Provisional	99.52
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.52
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.52
PRK06101	240	short chain dehydrogenase; Provisional	99.52
PRK07041	230	short chain dehydrogenase; Provisional	99.51
PRK08264	238	short chain dehydrogenase; Validated	99.51
PRK05884	223	short chain dehydrogenase; Provisional	99.5
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.5
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.5
PRK06924	251	short chain dehydrogenase; Provisional	99.5
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.5
PRK07023	243	short chain dehydrogenase; Provisional	99.49
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.49
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.48
PRK08017	256	oxidoreductase; Provisional	99.46
PRK07577	234	short chain dehydrogenase; Provisional	99.46
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.45
PLN03209	576	translocon at the inner envelope of chloroplast su	99.44
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.44
PRK06953	222	short chain dehydrogenase; Provisional	99.43
PRK08219	227	short chain dehydrogenase; Provisional	99.41
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.4
PLN02653	340	GDP-mannose 4,6-dehydratase	99.4
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.39
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.39
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.37
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.33
PRK08309	177	short chain dehydrogenase; Provisional	99.33
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.32
PLN02240	352	UDP-glucose 4-epimerase	99.31
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.3
PRK07578	199	short chain dehydrogenase; Provisional	99.29
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.28
PLN02214	342	cinnamoyl-CoA reductase	99.27
PLN00198	338	anthocyanidin reductase; Provisional	99.27
PLN02572	442	UDP-sulfoquinovose synthase	99.26
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.25
PLN02650	351	dihydroflavonol-4-reductase	99.23
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.2
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.19
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.18
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.16
PLN02583	297	cinnamoyl-CoA reductase	99.11
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.1
PLN02686	367	cinnamoyl-CoA reductase	99.1
PLN02427	386	UDP-apiose/xylose synthase	99.09
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.09
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.09
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.07
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	99.06
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.04
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.03
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.03
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.03
CHL00194	317	ycf39 Ycf39; Provisional	99.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.0
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.0
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	98.99
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.99
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.97
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	98.91
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	98.9
TIGR01746	367	Thioester-redct thioester reductase domain. It has	98.87
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.87
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	98.85
PLN02260	668	probable rhamnose biosynthetic enzyme	98.85
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	98.84
PLN02695	370	GDP-D-mannose-3',5'-epimerase	98.82
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	98.8
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	98.79
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.79
PRK05865	854	hypothetical protein; Provisional	98.75
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	98.74
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.7
PLN02206	442	UDP-glucuronate decarboxylase	98.69
PLN02166	436	dTDP-glucose 4,6-dehydratase	98.65
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	98.63
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	98.62
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	98.61
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	98.61
PRK09620	229	hypothetical protein; Provisional	98.55
PRK07201	657	short chain dehydrogenase; Provisional	98.54
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.54
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.53
PRK12320	699	hypothetical protein; Provisional	98.5
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	98.49
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	98.49
PLN02503	605	fatty acyl-CoA reductase 2	98.49
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.49
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.49
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.46
PLN02778	298	3,5-epimerase/4-reductase	98.44
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.42
PLN00016	378	RNA-binding protein; Provisional	98.4
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	98.39
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	98.39
PLN02996	491	fatty acyl-CoA reductase	98.36
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	98.36
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.36
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	98.29
PRK14982	340	acyl-ACP reductase; Provisional	98.27
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	98.25
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.18
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.18
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.17
COG3320	382	Putative dehydrogenase domain of multifunctional n	98.14
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	98.13
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	98.11
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	98.09
PLN02260	668	probable rhamnose biosynthetic enzyme	98.05
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.03
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	97.97
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.96
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.91
PRK06849	389	hypothetical protein; Provisional	97.79
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	97.77
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.77
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	97.73
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.7
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.69
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.64
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	97.63
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.62
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.6
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.58
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.56
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	97.56
COG3268	382	Uncharacterized conserved protein [Function unknow	97.53
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.53
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.51
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.5
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.49
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.48
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.47
COG2910	211	Putative NADH-flavin reductase [General function p	97.46
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.46
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.45
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.45
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.43
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.39
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.38
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.38
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.36
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.36
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.35
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.35
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	97.34
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	97.34
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.34
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.29
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	97.29
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.27
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	97.26
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.26
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	97.25
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.24
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	97.2
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	97.17
PRK06719	157	precorrin-2 dehydrogenase; Validated	97.17
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.16
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.12
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	97.12
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.1
PRK05479	330	ketol-acid reductoisomerase; Provisional	97.1
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.05
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.05
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	97.04
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.04
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	97.04
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	97.01
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.0
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.98
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.97
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	96.95
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.94
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.93
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	96.92
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.92
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.92
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.92
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.9
PRK08655	437	prephenate dehydrogenase; Provisional	96.9
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	96.89
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.87
PLN00203	519	glutamyl-tRNA reductase	96.87
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.86
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.86
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.85
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.83
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	96.82
PRK04148	134	hypothetical protein; Provisional	96.81
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.8
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.8
PRK09496	453	trkA potassium transporter peripheral membrane com	96.79
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	96.79
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.78
PRK12480	330	D-lactate dehydrogenase; Provisional	96.75
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.74
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.73
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.73
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.72
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.72
PRK13243	333	glyoxylate reductase; Reviewed	96.71
PRK08223	287	hypothetical protein; Validated	96.71
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.7
PLN02740	381	Alcohol dehydrogenase-like	96.7
PRK09496	453	trkA potassium transporter peripheral membrane com	96.66
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	96.63
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	96.62
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.62
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.59
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.58
PRK07411	390	hypothetical protein; Validated	96.57
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.56
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	96.56
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.55
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.55
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	96.55
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	96.54
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.53
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.51
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	96.49
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.49
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.48
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	96.47
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	96.47
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	96.45
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.45
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.44
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.44
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	96.44
PRK10669	558	putative cation:proton antiport protein; Provision	96.42
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	96.39
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	96.38
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.38
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	96.37
PTZ00354	334	alcohol dehydrogenase; Provisional	96.36
PRK06932	314	glycerate dehydrogenase; Provisional	96.36
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.36
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.34
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.34
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	96.33
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.32
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	96.32
PLN02586	360	probable cinnamyl alcohol dehydrogenase	96.32
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.32
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	96.3
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.29
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	96.29
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.29
PRK14851	679	hypothetical protein; Provisional	96.28
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	96.27
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	96.26
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.26
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.26
PRK07574	385	formate dehydrogenase; Provisional	96.25
PLN02178	375	cinnamyl-alcohol dehydrogenase	96.25
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.24
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.24
PLN02928	347	oxidoreductase family protein	96.23
PTZ00325	321	malate dehydrogenase; Provisional	96.23
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.23
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.22
PLN00106	323	malate dehydrogenase	96.22
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.21
PLN02827	378	Alcohol dehydrogenase-like	96.21
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	96.21
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.2
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.2
PRK06487	317	glycerate dehydrogenase; Provisional	96.2
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.19
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	96.18
PLN03139	386	formate dehydrogenase; Provisional	96.17
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	96.16
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.15
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	96.13
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.13
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	96.13
PLN02494	477	adenosylhomocysteinase	96.12
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	96.11
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.11
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.1
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.1
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.1
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.09
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	96.09
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.09
PRK01710	458	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.97
PRK05086	312	malate dehydrogenase; Provisional	95.96
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.96
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	95.96
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	95.96
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	95.95
PTZ00075	476	Adenosylhomocysteinase; Provisional	95.95
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.94
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	95.94
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.93
PLN02306	386	hydroxypyruvate reductase	95.92
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.9
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	95.9
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	95.86
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	95.85
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.85
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	95.84
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	95.84

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.88  E-value=2.7e-22  Score=134.13  Aligned_cols=97  Identities=43%  Similarity=0.673  Sum_probs=87.9

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      ++..+.+|+++|||+++|||.++|++|++.|++++++.|...+++...+++++.+..     .++..+++|++ +.+++.
T Consensus         6 ~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~-----~~v~~~~~Dvs-~~~~~~   79 (282)
T KOG1205|consen    6 FMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSL-----EKVLVLQLDVS-DEESVK   79 (282)
T ss_pred             cHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCc-----CccEEEeCccC-CHHHHH
Confidence            345678999999999999999999999999999999999999999998888877621     16999999996 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .+++++..++|++|+||||||+.
T Consensus        80 ~~~~~~~~~fg~vDvLVNNAG~~  102 (282)
T KOG1205|consen   80 KFVEWAIRHFGRVDVLVNNAGIS  102 (282)
T ss_pred             HHHHHHHHhcCCCCEEEecCccc
Confidence            99999999999999999999986

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.88  E-value=6.9e-22  Score=131.31  Aligned_cols=94  Identities=34%  Similarity=0.525  Sum_probs=86.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+++++|||+++|||.++|+.|+++|++|+++.|+.+++.++.++++...      +.++..+.+|++ +++++..+.
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~------~v~v~vi~~DLs-~~~~~~~l~   75 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT------GVEVEVIPADLS-DPEALERLE   75 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh------CceEEEEECcCC-ChhHHHHHH
Confidence            4568999999999999999999999999999999999999999999998754      467899999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++......||+||||||+..
T Consensus        76 ~~l~~~~~~IdvLVNNAG~g~   96 (265)
T COG0300          76 DELKERGGPIDVLVNNAGFGT   96 (265)
T ss_pred             HHHHhcCCcccEEEECCCcCC
Confidence            999988889999999999863

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.88  E-value=1.1e-21  Score=127.93  Aligned_cols=91  Identities=48%  Similarity=0.701  Sum_probs=83.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+|+++|||+++|||.++|++|++.|++|++++|+.++++++.+++.+         ..+.....|++ |.+++..++
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~---------~~~~~~~~DVt-D~~~~~~~i   72 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA---------GAALALALDVT-DRAAVEAAI   72 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc---------CceEEEeeccC-CHHHHHHHH
Confidence            45679999999999999999999999999999999999999999998853         36788999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      ..+..+|+++|+||||||++-
T Consensus        73 ~~~~~~~g~iDiLvNNAGl~~   93 (246)
T COG4221          73 EALPEEFGRIDILVNNAGLAL   93 (246)
T ss_pred             HHHHHhhCcccEEEecCCCCc
Confidence            999999999999999999863

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.85  E-value=3e-20  Score=124.02  Aligned_cols=95  Identities=35%  Similarity=0.458  Sum_probs=87.4

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      +..+..|++++||||++|+|+.+|.+++++|+++++++.+.....+..+++++.        +++..+.||++ +.+.+.
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~--------g~~~~y~cdis-~~eei~  102 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI--------GEAKAYTCDIS-DREEIY  102 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc--------CceeEEEecCC-CHHHHH
Confidence            456778999999999999999999999999999999999999998888888754        27899999995 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccCC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      ...+++++..|.+|+||||||+..
T Consensus       103 ~~a~~Vk~e~G~V~ILVNNAGI~~  126 (300)
T KOG1201|consen  103 RLAKKVKKEVGDVDILVNNAGIVT  126 (300)
T ss_pred             HHHHHHHHhcCCceEEEecccccc
Confidence            999999999999999999999975

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.84  E-value=1.7e-20  Score=119.43  Aligned_cols=89  Identities=22%  Similarity=0.339  Sum_probs=81.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .++|.++|||||++|||+++|+++.+.|-+|++++|+.+.+++..++.           ..+....||+. |.++++.++
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~-----------p~~~t~v~Dv~-d~~~~~~lv   69 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN-----------PEIHTEVCDVA-DRDSRRELV   69 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC-----------cchheeeeccc-chhhHHHHH
Confidence            357999999999999999999999999999999999999998877765           34678889995 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++++.++.+++||||||+..
T Consensus        70 ewLkk~~P~lNvliNNAGIqr   90 (245)
T COG3967          70 EWLKKEYPNLNVLINNAGIQR   90 (245)
T ss_pred             HHHHhhCCchheeeecccccc
Confidence            999999999999999999975

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.84  E-value=5.5e-20  Score=125.48  Aligned_cols=96  Identities=31%  Similarity=0.435  Sum_probs=87.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .++.+++++|||+++|||+++|+.|+.+|++|++..|+.+..++..+.+....     ...++.++++|++ +..+++.+
T Consensus        31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~-----~~~~i~~~~lDLs-sl~SV~~f  104 (314)
T KOG1208|consen   31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGK-----ANQKIRVIQLDLS-SLKSVRKF  104 (314)
T ss_pred             ccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcC-----CCCceEEEECCCC-CHHHHHHH
Confidence            45678999999999999999999999999999999999999999888888632     2457889999995 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      .++..+.++++|+||||||++.
T Consensus       105 a~~~~~~~~~ldvLInNAGV~~  126 (314)
T KOG1208|consen  105 AEEFKKKEGPLDVLINNAGVMA  126 (314)
T ss_pred             HHHHHhcCCCccEEEeCccccc
Confidence            9999999999999999999975

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.84  E-value=8.4e-20  Score=124.86  Aligned_cols=98  Identities=26%  Similarity=0.303  Sum_probs=85.2

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      ...++.+++++|||+++|||++++++|+++|++|++++|+.++.++..+++....     ...++.++.+|++ +.++++
T Consensus         8 ~~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~-----~~~~v~~~~~Dl~-d~~sv~   81 (313)
T PRK05854          8 TVPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAV-----PDAKLSLRALDLS-SLASVA   81 (313)
T ss_pred             cCcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC-----CCCceEEEEecCC-CHHHHH
Confidence            3456789999999999999999999999999999999999988888887776432     1246788999995 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccCC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      .+++++.+.++++|+||||||+..
T Consensus        82 ~~~~~~~~~~~~iD~li~nAG~~~  105 (313)
T PRK05854         82 ALGEQLRAEGRPIHLLINNAGVMT  105 (313)
T ss_pred             HHHHHHHHhCCCccEEEECCcccc
Confidence            999999999999999999999853

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.82  E-value=4.8e-19  Score=117.49  Aligned_cols=92  Identities=43%  Similarity=0.542  Sum_probs=82.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++++++++|||+++|||.+++++|++.|++|++++|+.++.++..+.++..+       .++.++.+|++ ++++++.++
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~~   74 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEG-------GEAVALAGDVR-DEAYAKALV   74 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEEcCCC-CHHHHHHHH
Confidence            4578999999999999999999999999999999999888888777776543       46788999995 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.++++++|+||||||+.
T Consensus        75 ~~~~~~~~~id~li~~ag~~   94 (254)
T PRK07478         75 ALAVERFGGLDIAFNNAGTL   94 (254)
T ss_pred             HHHHHhcCCCCEEEECCCCC
Confidence            99999999999999999975

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.82  E-value=5.7e-19  Score=117.16  Aligned_cols=93  Identities=35%  Similarity=0.555  Sum_probs=82.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .++.+++++|||+++|||.+++++|+++|++|++++|+.+..++..+.++..+       .++..+.+|++ ++++++.+
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~D~~-~~~~~~~~   76 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSG-------GKVVPVCCDVS-QHQQVTSM   76 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-------CeEEEEEccCC-CHHHHHHH
Confidence            35679999999999999999999999999999999999888888777776532       46788999995 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|+||||||+.
T Consensus        77 ~~~~~~~~g~id~lv~~ag~~   97 (253)
T PRK05867         77 LDQVTAELGGIDIAVCNAGII   97 (253)
T ss_pred             HHHHHHHhCCCCEEEECCCCC
Confidence            999999999999999999975

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.82  E-value=6.7e-19  Score=118.27  Aligned_cols=98  Identities=40%  Similarity=0.573  Sum_probs=85.6

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ...+.+|+++|||+++|||+++|++|++.|++|++++|+.+..+.....+...+.    ...++..+.||++ ++++++.
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~-~~~~~~~   77 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGY----TGGKVLAIVCDVS-KEVDVEK   77 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC----CCCeeEEEECcCC-CHHHHHH
Confidence            4568899999999999999999999999999999999999999888888776441    1356899999996 7888888


Q ss_pred             HHHHHHHH-cCCccEEEeCCccCC
Q 033624           92 SVQKAWEA-FGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~-~~~id~li~naG~~~  114 (115)
                      +++...+. +++||+||||||...
T Consensus        78 l~~~~~~~~~GkidiLvnnag~~~  101 (270)
T KOG0725|consen   78 LVEFAVEKFFGKIDILVNNAGALG  101 (270)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCcCC
Confidence            88888888 799999999999865

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.82  E-value=5.4e-19  Score=118.91  Aligned_cols=92  Identities=24%  Similarity=0.394  Sum_probs=81.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+|+++|||+++|||++++++|+++|++|++++|+.+.+++..++++..+       .++.++.+|++ +++++..++
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~-------~~~~~~~~Dv~-d~~~v~~~~   74 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEG-------FDVHGVMCDVR-HREEVTHLA   74 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CeEEEEeCCCC-CHHHHHHHH
Confidence            4679999999999999999999999999999999999888887777776432       46788999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|+||||||+.
T Consensus        75 ~~~~~~~g~id~li~nAg~~   94 (275)
T PRK05876         75 DEAFRLLGHVDVVFSNAGIV   94 (275)
T ss_pred             HHHHHHcCCCCEEEECCCcC
Confidence            99999999999999999974

>PRK08589 short chain dehydrogenase; Validated

Probab=99.81  E-value=1.1e-18  Score=117.05  Aligned_cols=91  Identities=34%  Similarity=0.550  Sum_probs=80.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+++++|||+++|||+++++.|+++|++|++++|+ +..++..+.++..+       .++..+.+|++ +++++..++
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~-------~~~~~~~~Dl~-~~~~~~~~~   73 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNG-------GKAKAYHVDIS-DEQQVKDFA   73 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcC-------CeEEEEEeecC-CHHHHHHHH
Confidence            4678999999999999999999999999999999999 66777777775432       46888999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|+||||||+.
T Consensus        74 ~~~~~~~g~id~li~~Ag~~   93 (272)
T PRK08589         74 SEIKEQFGRVDVLFNNAGVD   93 (272)
T ss_pred             HHHHHHcCCcCEEEECCCCC
Confidence            99999999999999999975

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.81  E-value=8.5e-19  Score=119.61  Aligned_cols=92  Identities=28%  Similarity=0.468  Sum_probs=78.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc----------chHHHHHHHhhCCCCCCCCCccceEEEEeec
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV----------DRLKSLCDEINKPGMVGSPDSVRAVAVELDV   82 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di   82 (115)
                      ..+.+|+++|||+++|||+++|+.|++.|++|++++|+.          +..+...+.++..+       .++.++.+|+
T Consensus         4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~Dv   76 (305)
T PRK08303          4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAG-------GRGIAVQVDH   76 (305)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcC-------CceEEEEcCC
Confidence            457899999999999999999999999999999999974          34455555665432       4577899999


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEeCC-cc
Q 033624           83 CADGATIEISVQKAWEAFGRVDALVNNA-GI  112 (115)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~id~li~na-G~  112 (115)
                      + ++++++.+++++.+.+++||+||||| |+
T Consensus        77 ~-~~~~v~~~~~~~~~~~g~iDilVnnA~g~  106 (305)
T PRK08303         77 L-VPEQVRALVERIDREQGRLDILVNDIWGG  106 (305)
T ss_pred             C-CHHHHHHHHHHHHHHcCCccEEEECCccc
Confidence            6 89999999999999999999999999 74

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.81  E-value=9.1e-19  Score=115.01  Aligned_cols=91  Identities=21%  Similarity=0.297  Sum_probs=81.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+++++|||+++|||++++++|+++|++|++++|+.+.+++..+.++..+       .++..+.+|++ ++++++.++
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~-------~~~~~~~~D~~-~~~~~~~~~   73 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALT-------DNVYSFQLKDF-SQESIRHLF   73 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-------CCeEEEEccCC-CHHHHHHHH
Confidence            4678999999999999999999999999999999999988888877776543       45778899996 899999999


Q ss_pred             HHHHHHcC-CccEEEeCCcc
Q 033624           94 QKAWEAFG-RVDALVNNAGI  112 (115)
Q Consensus        94 ~~~~~~~~-~id~li~naG~  112 (115)
                      +++.+.++ ++|++|||||.
T Consensus        74 ~~~~~~~g~~iD~li~nag~   93 (227)
T PRK08862         74 DAIEQQFNRAPDVLVNNWTS   93 (227)
T ss_pred             HHHHHHhCCCCCEEEECCcc
Confidence            99999998 99999999985

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.4e-18  Score=117.55  Aligned_cols=93  Identities=41%  Similarity=0.529  Sum_probs=80.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc---------chHHHHHHHhhCCCCCCCCCccceEEEEeecCC
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV---------DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCA   84 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~   84 (115)
                      .+++++++|||+++|||++++++|+++|++|++++++.         +..++..+++...+       .++..+.+|++ 
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~Dv~-   74 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAG-------GEAVANGDDIA-   74 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcC-------CceEEEeCCCC-
Confidence            36789999999999999999999999999999988765         55666667775432       46788999996 


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           85 DGATIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++++..+++++.+.++++|+||||||+..
T Consensus        75 ~~~~v~~~~~~~~~~~g~id~lv~nAG~~~  104 (286)
T PRK07791         75 DWDGAANLVDAAVETFGGLDVLVNNAGILR  104 (286)
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence            899999999999999999999999999853

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.4e-18  Score=119.66  Aligned_cols=92  Identities=35%  Similarity=0.522  Sum_probs=82.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+++++|||+++|||++++++|+++|++|++++|+.+.+++..++++..+       .++..+.+|++ +.++++.++
T Consensus         4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g-------~~~~~~~~Dv~-d~~~v~~~~   75 (330)
T PRK06139          4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALG-------AEVLVVPTDVT-DADQVKALA   75 (330)
T ss_pred             CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------CcEEEEEeeCC-CHHHHHHHH
Confidence            4678999999999999999999999999999999999988888888876543       46778899996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|++|||||+.
T Consensus        76 ~~~~~~~g~iD~lVnnAG~~   95 (330)
T PRK06139         76 TQAASFGGRIDVWVNNVGVG   95 (330)
T ss_pred             HHHHHhcCCCCEEEECCCcC
Confidence            99988889999999999974

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.80  E-value=1.4e-18  Score=115.85  Aligned_cols=96  Identities=16%  Similarity=0.229  Sum_probs=76.3

Q ss_pred             cCCCCCCCCcEEEEecCC--ChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCH
Q 033624            9 LEPWHDLNEKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADG   86 (115)
Q Consensus         9 ~~~~~~~~~~~~lvtG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~   86 (115)
                      |.+..++.+|+++|||++  +|||+++|++|+++|++|++++|+....+. .+++....       .....+.+|++ ++
T Consensus         2 ~~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~-~~~~~~~~-------~~~~~~~~D~~-~~   72 (258)
T PRK07533          2 MQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPY-VEPLAEEL-------DAPIFLPLDVR-EP   72 (258)
T ss_pred             CCcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHH-HHHHHHhh-------ccceEEecCcC-CH
Confidence            445566789999999998  599999999999999999999988543222 22222111       12457889996 89


Q ss_pred             HHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           87 ATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        87 ~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+++.+.+.++++|+||||||+.
T Consensus        73 ~~v~~~~~~~~~~~g~ld~lv~nAg~~   99 (258)
T PRK07533         73 GQLEAVFARIAEEWGRLDFLLHSIAFA   99 (258)
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEcCccC
Confidence            999999999999999999999999975

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.80  E-value=2.1e-18  Score=115.03  Aligned_cols=94  Identities=34%  Similarity=0.414  Sum_probs=82.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+++++|||+++|||++++++|+++|++|++++|+.+.+++..+.+....     ...++..+.+|++ ++++++.++
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~-~~~~v~~~~   78 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKF-----PGARLLAARCDVL-DEADVAAFA   78 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhC-----CCceEEEEEecCC-CHHHHHHHH
Confidence            5679999999999999999999999999999999999888887777775432     1246788999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|+||||||+.
T Consensus        79 ~~~~~~~g~id~li~~Ag~~   98 (265)
T PRK07062         79 AAVEARFGGVDMLVNNAGQG   98 (265)
T ss_pred             HHHHHhcCCCCEEEECCCCC
Confidence            99999999999999999974

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.80  E-value=2.3e-18  Score=114.62  Aligned_cols=95  Identities=36%  Similarity=0.504  Sum_probs=82.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+.+++++|||+++|||++++++|+++|++|++++|+.+..++..+.+....     .+.++.++.+|++ +++++..+
T Consensus         3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~-~~~~~~~~   76 (260)
T PRK07063          3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDV-----AGARVLAVPADVT-DAASVAAA   76 (260)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcc-----CCceEEEEEccCC-CHHHHHHH
Confidence            34679999999999999999999999999999999999888888877776421     1246888999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|++|||||+.
T Consensus        77 ~~~~~~~~g~id~li~~ag~~   97 (260)
T PRK07063         77 VAAAEEAFGPLDVLVNNAGIN   97 (260)
T ss_pred             HHHHHHHhCCCcEEEECCCcC
Confidence            999999999999999999974

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.80  E-value=1.7e-18  Score=115.89  Aligned_cols=90  Identities=20%  Similarity=0.355  Sum_probs=75.0

Q ss_pred             CCCcEEEEecCCC--hHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           15 LNEKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        15 ~~~~~~lvtG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      +++|+++|||+++  |||+++|++|+++|++|++++|+ ...++..+++....       .....+.+|++ ++++++.+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~-------~~~~~~~~Dl~-~~~~v~~~   74 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQL-------GSDIVLPCDVA-EDASIDAM   74 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhcc-------CCceEeecCCC-CHHHHHHH
Confidence            6789999999985  99999999999999999999887 34444455554332       23567889996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|+||||||+.
T Consensus        75 ~~~~~~~~g~iD~linnAg~~   95 (262)
T PRK07984         75 FAELGKVWPKFDGFVHSIGFA   95 (262)
T ss_pred             HHHHHhhcCCCCEEEECCccC
Confidence            999999999999999999975

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.80  E-value=1.9e-18  Score=114.88  Aligned_cols=89  Identities=19%  Similarity=0.303  Sum_probs=74.7

Q ss_pred             CCCCcEEEEecCC--ChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           14 DLNEKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        14 ~~~~~~~lvtG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .+.+|+++|||++  +|||++++++|++.|++|++++|+. +..+..+++..         .++..+++|++ ++++++.
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~---------~~~~~~~~Dl~-~~~~v~~   72 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVD---------EEDLLVECDVA-SDESIER   72 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhcc---------CceeEEeCCCC-CHHHHHH
Confidence            4679999999998  7999999999999999999999873 33333333321         25778999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++++.++++++|+||||||+.
T Consensus        73 ~~~~~~~~~g~iD~lv~nAg~~   94 (252)
T PRK06079         73 AFATIKERVGKIDGIVHAIAYA   94 (252)
T ss_pred             HHHHHHHHhCCCCEEEEccccc
Confidence            9999999999999999999975

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.79  E-value=2.8e-18  Score=116.84  Aligned_cols=97  Identities=32%  Similarity=0.457  Sum_probs=82.7

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      .+.++.+++++|||+++|||++++++|+++|++|++++|+.+..++..+.+....     ...++.++.+|++ +.++++
T Consensus        10 ~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~~Dl~-d~~~v~   83 (306)
T PRK06197         10 DIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAAT-----PGADVTLQELDLT-SLASVR   83 (306)
T ss_pred             ccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC-----CCCceEEEECCCC-CHHHHH
Confidence            3456789999999999999999999999999999999999887776666665321     1245788999996 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .+++++.+.++++|+||||||+.
T Consensus        84 ~~~~~~~~~~~~iD~li~nAg~~  106 (306)
T PRK06197         84 AAADALRAAYPRIDLLINNAGVM  106 (306)
T ss_pred             HHHHHHHhhCCCCCEEEECCccc
Confidence            99999999999999999999975

>PLN02253 xanthoxin dehydrogenase

Probab=99.79  E-value=4.1e-18  Score=114.50  Aligned_cols=94  Identities=27%  Similarity=0.432  Sum_probs=81.1

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      +...+.+++++|||+++|||++++++|+++|++|++++|+.+..++..+.+..        ..++.++++|++ ++++++
T Consensus        12 ~~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~Dl~-d~~~~~   82 (280)
T PLN02253         12 PSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG--------EPNVCFFHCDVT-VEDDVS   82 (280)
T ss_pred             cccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC--------CCceEEEEeecC-CHHHHH
Confidence            44567899999999999999999999999999999999987766666655532        136789999996 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .+++.+.+.++++|+||||||+.
T Consensus        83 ~~~~~~~~~~g~id~li~~Ag~~  105 (280)
T PLN02253         83 RAVDFTVDKFGTLDIMVNNAGLT  105 (280)
T ss_pred             HHHHHHHHHhCCCCEEEECCCcC
Confidence            99999999999999999999975

>PRK06720 hypothetical protein; Provisional

Probab=99.79  E-value=5.6e-18  Score=106.85  Aligned_cols=93  Identities=30%  Similarity=0.447  Sum_probs=80.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+++++++|||+++|||.++++.|++.|++|++++|+.+..+...+++...+       .+..++.+|++ +.++++.++
T Consensus        13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dl~-~~~~v~~~v   84 (169)
T PRK06720         13 KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLG-------GEALFVSYDME-KQGDWQRVI   84 (169)
T ss_pred             ccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------CcEEEEEccCC-CHHHHHHHH
Confidence            4679999999999999999999999999999999998877766666665332       35667899996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+.++++|++|||||+..
T Consensus        85 ~~~~~~~G~iDilVnnAG~~~  105 (169)
T PRK06720         85 SITLNAFSRIDMLFQNAGLYK  105 (169)
T ss_pred             HHHHHHcCCCCEEEECCCcCC
Confidence            999999999999999999753

>PRK06194 hypothetical protein; Provisional

Probab=99.79  E-value=3.5e-18  Score=115.12  Aligned_cols=93  Identities=37%  Similarity=0.521  Sum_probs=81.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+++++|||+++|||+.++++|+++|++|++++|+.+..++..+.+...+       .++.++.+|++ +.++++.++
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-d~~~~~~~~   74 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQG-------AEVLGVRTDVS-DAAQVEALA   74 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC-------CeEEEEECCCC-CHHHHHHHH
Confidence            4568999999999999999999999999999999998887777777665432       46888999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +.+.+.++++|+||||||+..
T Consensus        75 ~~~~~~~g~id~vi~~Ag~~~   95 (287)
T PRK06194         75 DAALERFGAVHLLFNNAGVGA   95 (287)
T ss_pred             HHHHHHcCCCCEEEECCCCCC
Confidence            999999999999999999853

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.79  E-value=3.3e-18  Score=114.40  Aligned_cols=92  Identities=24%  Similarity=0.350  Sum_probs=79.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+|+++|||+++|||++++++|+++|++|++++|+.+.+++..+.+....      +.++..+.+|++ ++++++.++
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~-~~~~i~~~~   77 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSES------NVDVSYIVADLT-KREDLERTV   77 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc------CCceEEEEecCC-CHHHHHHHH
Confidence            3679999999999999999999999999999999999888877777765421      246788999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++. +++++|++|||||+.
T Consensus        78 ~~~~-~~g~iD~lv~nag~~   96 (263)
T PRK08339         78 KELK-NIGEPDIFFFSTGGP   96 (263)
T ss_pred             HHHH-hhCCCcEEEECCCCC
Confidence            9875 689999999999974

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.79  E-value=5.2e-18  Score=112.66  Aligned_cols=94  Identities=33%  Similarity=0.524  Sum_probs=80.4

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc-hHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-RLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      +.++.+++++|||+++|||+++|++|+++|++|++++|+.+ ..++..+.++..+       .++..+.+|++ ++++++
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~-------~~~~~~~~D~~-~~~~i~   74 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAG-------RRAIQIAADVT-SKADLR   74 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcC-------CceEEEEcCCC-CHHHHH
Confidence            34578999999999999999999999999999999998764 3566666665432       46778899996 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .+++++.+.++++|++|||||+.
T Consensus        75 ~~~~~~~~~~g~id~li~~ag~~   97 (254)
T PRK06114         75 AAVARTEAELGALTLAVNAAGIA   97 (254)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCC
Confidence            99999999999999999999975

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.79  E-value=4.7e-18  Score=112.75  Aligned_cols=93  Identities=26%  Similarity=0.482  Sum_probs=82.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+.+|+++|||+++|||++++++|+++|++|++++|+.+..++..++++..+       .++..+.+|++ ++++++.+
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dl~-~~~~~~~~   76 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEG-------IKAHAAPFNVT-HKQEVEAA   76 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcC-------CeEEEEecCCC-CHHHHHHH
Confidence            35679999999999999999999999999999999999888888777776432       45778899996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++.+.+.++++|++|||||+.
T Consensus        77 ~~~~~~~~~~id~vi~~ag~~   97 (254)
T PRK08085         77 IEHIEKDIGPIDVLINNAGIQ   97 (254)
T ss_pred             HHHHHHhcCCCCEEEECCCcC
Confidence            999999999999999999974

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.79  E-value=5.4e-18  Score=115.03  Aligned_cols=94  Identities=38%  Similarity=0.533  Sum_probs=82.6

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ...+.+++++|||+++|||+++++.|+++|++|++++|+.+.+++..+.+...+       .++.++.+|++ +.+++..
T Consensus        35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~-------~~~~~~~~Dl~-d~~~v~~  106 (293)
T PRK05866         35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAG-------GDAMAVPCDLS-DLDAVDA  106 (293)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------CcEEEEEccCC-CHHHHHH
Confidence            345678999999999999999999999999999999999888887777775432       45778999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.+.++++|++|||||+.
T Consensus       107 ~~~~~~~~~g~id~li~~AG~~  128 (293)
T PRK05866        107 LVADVEKRIGGVDILINNAGRS  128 (293)
T ss_pred             HHHHHHHHcCCCCEEEECCCCC
Confidence            9999999999999999999975

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.79  E-value=4.8e-18  Score=113.35  Aligned_cols=89  Identities=33%  Similarity=0.415  Sum_probs=78.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+++++|||+++|||++++++|+++|++|++++|+.+..++..+.+.          .++.++.+|++ +++++..++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dl~-~~~~~~~~~   71 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLG----------ERARFIATDIT-DDAAIERAV   71 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----------CeeEEEEecCC-CHHHHHHHH
Confidence            4678999999999999999999999999999999999877766655541          35778999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|++|||||+.
T Consensus        72 ~~~~~~~g~id~lv~~ag~~   91 (261)
T PRK08265         72 ATVVARFGRVDILVNLACTY   91 (261)
T ss_pred             HHHHHHhCCCCEEEECCCCC
Confidence            99999999999999999974

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.79  E-value=3.6e-18  Score=113.84  Aligned_cols=94  Identities=22%  Similarity=0.444  Sum_probs=79.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEec-ccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ..+.+|+++|||+++|||++++++|++.|++|++++| +.+..+...+.++...      +.++.++.+|++ ++++++.
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~D~~-~~~~~~~   76 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKY------GIKAKAYPLNIL-EPETYKE   76 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhc------CCceEEEEcCCC-CHHHHHH
Confidence            4567999999999999999999999999999988865 4555666666665321      246889999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++++.+.++++|+||||||+.
T Consensus        77 ~~~~~~~~~g~id~lv~nAg~~   98 (260)
T PRK08416         77 LFKKIDEDFDRVDFFISNAIIS   98 (260)
T ss_pred             HHHHHHHhcCCccEEEECcccc
Confidence            9999999999999999999864

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.79  E-value=4.6e-18  Score=117.30  Aligned_cols=92  Identities=36%  Similarity=0.560  Sum_probs=82.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+++++|||+++|||++++++|+++|++|++++|+.+.+++..++++..+       .++.++.+|++ ++++++.++
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g-------~~~~~v~~Dv~-d~~~v~~~~   76 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAG-------GEALAVVADVA-DAEAVQAAA   76 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcC-------CcEEEEEecCC-CHHHHHHHH
Confidence            4678999999999999999999999999999999999888888877776543       56888999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +.+.+.++++|++|||||+.
T Consensus        77 ~~~~~~~g~iD~lInnAg~~   96 (334)
T PRK07109         77 DRAEEELGPIDTWVNNAMVT   96 (334)
T ss_pred             HHHHHHCCCCCEEEECCCcC
Confidence            99999999999999999974

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.78  E-value=6.2e-18  Score=114.77  Aligned_cols=93  Identities=34%  Similarity=0.506  Sum_probs=81.3

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      +.++.+++++|||+++|||+.+++.|++.|++|++++|+.+.+++..+.+..        ..++..+.+|++ +.++++.
T Consensus         4 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~--------~~~~~~~~~Dv~-d~~~v~~   74 (296)
T PRK05872          4 MTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG--------DDRVLTVVADVT-DLAAMQA   74 (296)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC--------CCcEEEEEecCC-CHHHHHH
Confidence            3467899999999999999999999999999999999998888777776642        135667789996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++++.+.++++|++|||||+.
T Consensus        75 ~~~~~~~~~g~id~vI~nAG~~   96 (296)
T PRK05872         75 AAEEAVERFGGIDVVVANAGIA   96 (296)
T ss_pred             HHHHHHHHcCCCCEEEECCCcC
Confidence            9999999999999999999975

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.78  E-value=2.4e-18  Score=111.12  Aligned_cols=95  Identities=25%  Similarity=0.442  Sum_probs=81.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      +++||++++||+.+|||++++++|++.|..+.++..+.+..+. ...+++..     +..++.+++||++ +..+++..+
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a-~akL~ai~-----p~~~v~F~~~DVt-~~~~~~~~f   74 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEA-IAKLQAIN-----PSVSVIFIKCDVT-NRGDLEAAF   74 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHH-HHHHhccC-----CCceEEEEEeccc-cHHHHHHHH
Confidence            5679999999999999999999999999998888877777554 44444432     2467999999997 699999999


Q ss_pred             HHHHHHcCCccEEEeCCccCCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRGN  115 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~~  115 (115)
                      +++.+.++.||++||+||++.|
T Consensus        75 ~ki~~~fg~iDIlINgAGi~~d   96 (261)
T KOG4169|consen   75 DKILATFGTIDILINGAGILDD   96 (261)
T ss_pred             HHHHHHhCceEEEEcccccccc
Confidence            9999999999999999999764

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.78  E-value=4.7e-18  Score=113.54  Aligned_cols=91  Identities=14%  Similarity=0.186  Sum_probs=73.5

Q ss_pred             CCCCcEEEEecC--CChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           14 DLNEKVVMVTGA--SSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        14 ~~~~~~~lvtG~--~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .+.+|+++|||+  ++|||+++|++|+++|++|++++|+. +..+..+++....       .....+++|++ ++++++.
T Consensus         3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~-------~~~~~~~~Dv~-~~~~v~~   73 (261)
T PRK08690          3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAEL-------DSELVFRCDVA-SDDEINQ   73 (261)
T ss_pred             ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhcc-------CCceEEECCCC-CHHHHHH
Confidence            367899999997  67999999999999999999987753 3333344443221       13457899996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++++.++++++|+||||||+.
T Consensus        74 ~~~~~~~~~g~iD~lVnnAG~~   95 (261)
T PRK08690         74 VFADLGKHWDGLDGLVHSIGFA   95 (261)
T ss_pred             HHHHHHHHhCCCcEEEECCccC
Confidence            9999999999999999999985

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.78  E-value=7e-18  Score=112.03  Aligned_cols=90  Identities=34%  Similarity=0.520  Sum_probs=75.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+|+++|||+++|||++++++|+++|++|++++|+..  +...+.++..+       .++..+.+|++ ++++++.++
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~-------~~~~~~~~Dl~-~~~~~~~~~   74 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALG-------RKFHFITADLI-QQKDIDSIV   74 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcC-------CeEEEEEeCCC-CHHHHHHHH
Confidence            467999999999999999999999999999999887642  23334443322       46788999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|+||||||+.
T Consensus        75 ~~~~~~~g~iD~lv~~ag~~   94 (251)
T PRK12481         75 SQAVEVMGHIDILINNAGII   94 (251)
T ss_pred             HHHHHHcCCCCEEEECCCcC
Confidence            99999999999999999975

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.78  E-value=4.1e-18  Score=114.45  Aligned_cols=90  Identities=17%  Similarity=0.233  Sum_probs=73.0

Q ss_pred             CCCcEEEEecCCC--hHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           15 LNEKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        15 ~~~~~~lvtG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      +++|+++|||+++  |||+++|++|+++|++|++++|+....+...+..+..+        ....+++|++ ++++++.+
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g--------~~~~~~~Dv~-d~~~v~~~   75 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLG--------SDFVLPCDVE-DIASVDAV   75 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcC--------CceEEeCCCC-CHHHHHHH
Confidence            5789999999996  99999999999999999999987543333222222211        1246899996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|+||||||+.
T Consensus        76 ~~~~~~~~g~iD~lVnnAG~~   96 (271)
T PRK06505         76 FEALEKKWGKLDFVVHAIGFS   96 (271)
T ss_pred             HHHHHHHhCCCCEEEECCccC
Confidence            999999999999999999975

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.78  E-value=8.2e-18  Score=112.97  Aligned_cols=93  Identities=33%  Similarity=0.520  Sum_probs=81.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .++.+++++|||+++|||++++++|+++|++|++++|+.+..++..+.+...+       .++.++.+|++ +++++..+
T Consensus         6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~-~~~~v~~~   77 (278)
T PRK08277          6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAG-------GEALAVKADVL-DKESLEQA   77 (278)
T ss_pred             eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CeEEEEECCCC-CHHHHHHH
Confidence            35679999999999999999999999999999999999887777777776432       46888999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|++|||||+.
T Consensus        78 ~~~~~~~~g~id~li~~ag~~   98 (278)
T PRK08277         78 RQQILEDFGPCDILINGAGGN   98 (278)
T ss_pred             HHHHHHHcCCCCEEEECCCCC
Confidence            999999999999999999964

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.78  E-value=7.8e-18  Score=115.39  Aligned_cols=92  Identities=27%  Similarity=0.344  Sum_probs=79.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+++++|||+++|||.++++.|+++|++|++++|+.+..+...+.+...       ..++.++.+|++ +.++++.++
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dl~-~~~~v~~~~   74 (322)
T PRK07453          3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP-------PDSYTIIHIDLG-DLDSVRRFV   74 (322)
T ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc-------CCceEEEEecCC-CHHHHHHHH
Confidence            456899999999999999999999999999999999988877777766432       246788999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+..+++|+||||||+.
T Consensus        75 ~~~~~~~~~iD~li~nAg~~   94 (322)
T PRK07453         75 DDFRALGKPLDALVCNAAVY   94 (322)
T ss_pred             HHHHHhCCCccEEEECCccc
Confidence            98877778899999999974

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.78  E-value=6.3e-18  Score=105.65  Aligned_cols=89  Identities=35%  Similarity=0.621  Sum_probs=78.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCC-eEEEEecc--cchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR--VDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      |+++|||+++|||++++++|+++|+ +|++++|+  .+..++....++..+       .++.++++|++ ++++++.+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~-------~~~~~~~~D~~-~~~~~~~~~~   72 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPG-------AKITFIECDLS-DPESIRALIE   72 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTT-------SEEEEEESETT-SHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccc-------ccccccccccc-cccccccccc
Confidence            6899999999999999999999966 67888888  666777777776443       67899999996 8999999999


Q ss_pred             HHHHHcCCccEEEeCCccCC
Q 033624           95 KAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~~  114 (115)
                      ++.+.++++|++|||||+..
T Consensus        73 ~~~~~~~~ld~li~~ag~~~   92 (167)
T PF00106_consen   73 EVIKRFGPLDILINNAGIFS   92 (167)
T ss_dssp             HHHHHHSSESEEEEECSCTT
T ss_pred             cccccccccccccccccccc
Confidence            99999999999999999864

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.78  E-value=1.2e-17  Score=110.85  Aligned_cols=93  Identities=30%  Similarity=0.530  Sum_probs=82.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .++.+|+++|||++++||++++++|+++|++|++.+|+.+..++..+.++..+       .++..+.+|++ ++++++.+
T Consensus         6 ~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~-------~~~~~~~~D~~-~~~~~~~~   77 (255)
T PRK07523          6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQG-------LSAHALAFDVT-DHDAVRAA   77 (255)
T ss_pred             cCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-------ceEEEEEccCC-CHHHHHHH
Confidence            35679999999999999999999999999999999999887777777775432       46788999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|++|||||..
T Consensus        78 ~~~~~~~~~~~d~li~~ag~~   98 (255)
T PRK07523         78 IDAFEAEIGPIDILVNNAGMQ   98 (255)
T ss_pred             HHHHHHhcCCCCEEEECCCCC
Confidence            999999999999999999975

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.77  E-value=1.2e-17  Score=113.91  Aligned_cols=93  Identities=41%  Similarity=0.532  Sum_probs=79.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc-chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .++++++++|||+++|||++++++|+++|++|++.+++. +..++..++++..+       .++.++.+|++ +.+++..
T Consensus         8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g-------~~~~~~~~Dv~-d~~~~~~   79 (306)
T PRK07792          8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAG-------AKAVAVAGDIS-QRATADE   79 (306)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcC-------CeEEEEeCCCC-CHHHHHH
Confidence            567899999999999999999999999999999988753 44556666666433       56888999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+.+ ++++|+||||||+..
T Consensus        80 ~~~~~~~-~g~iD~li~nAG~~~  101 (306)
T PRK07792         80 LVATAVG-LGGLDIVVNNAGITR  101 (306)
T ss_pred             HHHHHHH-hCCCCEEEECCCCCC
Confidence            9999888 999999999999864

>PRK05717 oxidoreductase; Validated

Probab=99.77  E-value=1.3e-17  Score=110.83  Aligned_cols=92  Identities=33%  Similarity=0.451  Sum_probs=78.6

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      |...+++++++|||++++||+.++++|+++|++|++++|+.+...+..+.+.          .++.++.+|++ +.++++
T Consensus         4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~----------~~~~~~~~Dl~-~~~~~~   72 (255)
T PRK05717          4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALG----------ENAWFIAMDVA-DEAQVA   72 (255)
T ss_pred             CCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcC----------CceEEEEccCC-CHHHHH
Confidence            4456789999999999999999999999999999999988766555444331          35778999996 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .+++++.+.++++|++|||||+.
T Consensus        73 ~~~~~~~~~~g~id~li~~ag~~   95 (255)
T PRK05717         73 AGVAEVLGQFGRLDALVCNAAIA   95 (255)
T ss_pred             HHHHHHHHHhCCCCEEEECCCcc
Confidence            99999999999999999999975

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.4e-17  Score=110.28  Aligned_cols=93  Identities=32%  Similarity=0.509  Sum_probs=81.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      +.+.+++++|||+++|||.+++++|+++|++|++++|+.+..+...+.+...+       .++..+++|++ +.++++.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~   75 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAG-------GKAEALACHIG-EMEQIDAL   75 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CeEEEEEcCCC-CHHHHHHH
Confidence            45778999999999999999999999999999999999888877777775432       35778999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|++|||||..
T Consensus        76 ~~~~~~~~~~id~li~~ag~~   96 (252)
T PRK07035         76 FAHIRERHGRLDILVNNAAAN   96 (252)
T ss_pred             HHHHHHHcCCCCEEEECCCcC
Confidence            999999999999999999863

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.77  E-value=1.1e-17  Score=111.56  Aligned_cols=89  Identities=33%  Similarity=0.511  Sum_probs=77.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+++++++|||+++|||++++++|+++|++|++++|+.+..+++.+.+.          .++.++++|++ ++++++.++
T Consensus         3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~-~~~~~~~~~   71 (263)
T PRK06200          3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFG----------DHVLVVEGDVT-SYADNQRAV   71 (263)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----------CcceEEEccCC-CHHHHHHHH
Confidence            3578999999999999999999999999999999999877766555431          35778899996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|+||||||+.
T Consensus        72 ~~~~~~~g~id~li~~ag~~   91 (263)
T PRK06200         72 DQTVDAFGKLDCFVGNAGIW   91 (263)
T ss_pred             HHHHHhcCCCCEEEECCCCc
Confidence            99999999999999999974

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.6e-17  Score=110.13  Aligned_cols=92  Identities=34%  Similarity=0.521  Sum_probs=81.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+++++|||++++||.+++++|+++|++|++++|+.+..++..+.++..+       .++..+.+|++ +.+++..++
T Consensus         4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~i~~~~   75 (253)
T PRK06172          4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAG-------GEALFVACDVT-RDAEVKALV   75 (253)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-------CceEEEEcCCC-CHHHHHHHH
Confidence            4678999999999999999999999999999999999888877777776543       46888999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|++|||+|+.
T Consensus        76 ~~~~~~~g~id~li~~ag~~   95 (253)
T PRK06172         76 EQTIAAYGRLDYAFNNAGIE   95 (253)
T ss_pred             HHHHHHhCCCCEEEECCCCC
Confidence            99999999999999999974

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.77  E-value=1.2e-17  Score=112.39  Aligned_cols=90  Identities=14%  Similarity=0.210  Sum_probs=72.1

Q ss_pred             CCCcEEEEecCC--ChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           15 LNEKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        15 ~~~~~~lvtG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      +.+|+++|||++  +|||+++|+.|+++|++|++++|+.. ..+..+.+....      +.. ..+.+|++ +.++++.+
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~------~~~-~~~~~Dv~-d~~~v~~~   73 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQEL------GSD-YVYELDVS-KPEHFKSL   73 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhc------CCc-eEEEecCC-CHHHHHHH
Confidence            468999999997  79999999999999999999998853 222233332211      122 56889996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|+||||||+.
T Consensus        74 ~~~i~~~~g~iDilVnnAG~~   94 (274)
T PRK08415         74 AESLKKDLGKIDFIVHSVAFA   94 (274)
T ss_pred             HHHHHHHcCCCCEEEECCccC
Confidence            999999999999999999974

>PRK06196 oxidoreductase; Provisional

Probab=99.77  E-value=1e-17  Score=114.61  Aligned_cols=89  Identities=36%  Similarity=0.510  Sum_probs=77.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .++.+++++|||+++|||++++++|+++|++|++++|+.+..++..+.+.           .+.++.+|++ +.++++.+
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~-----------~v~~~~~Dl~-d~~~v~~~   89 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID-----------GVEVVMLDLA-DLESVRAF   89 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-----------hCeEEEccCC-CHHHHHHH
Confidence            35678999999999999999999999999999999999877766655542           2667899996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|+||||||+.
T Consensus        90 ~~~~~~~~~~iD~li~nAg~~  110 (315)
T PRK06196         90 AERFLDSGRRIDILINNAGVM  110 (315)
T ss_pred             HHHHHhcCCCCCEEEECCCCC
Confidence            999988889999999999975

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.77  E-value=1.3e-17  Score=111.29  Aligned_cols=92  Identities=24%  Similarity=0.333  Sum_probs=75.3

Q ss_pred             CCCCcEEEEecCC--ChHHHHHHHHHHHhCCeEEEEecccc--hHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHH
Q 033624           14 DLNEKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVD--RLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATI   89 (115)
Q Consensus        14 ~~~~~~~lvtG~~--~giG~~~a~~l~~~g~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~   89 (115)
                      .+.+|+++|||++  +|||+++|++|+++|++|+++.++.+  +.++..+++....       .++.++.+|++ +++++
T Consensus         3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~-d~~~v   74 (258)
T PRK07370          3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPL-------NPSLFLPCDVQ-DDAQI   74 (258)
T ss_pred             ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhcc-------CcceEeecCcC-CHHHH
Confidence            4679999999986  89999999999999999988876543  3344455554332       24568899995 89999


Q ss_pred             HHHHHHHHHHcCCccEEEeCCccC
Q 033624           90 EISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        90 ~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      +.+++++.++++++|+||||||+.
T Consensus        75 ~~~~~~~~~~~g~iD~lv~nag~~   98 (258)
T PRK07370         75 EETFETIKQKWGKLDILVHCLAFA   98 (258)
T ss_pred             HHHHHHHHHHcCCCCEEEEccccc
Confidence            999999999999999999999975

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.77  E-value=1.3e-17  Score=111.16  Aligned_cols=90  Identities=17%  Similarity=0.285  Sum_probs=74.4

Q ss_pred             CCCCcEEEEecCC--ChHHHHHHHHHHHhCCeEEEEeccc---chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHH
Q 033624           14 DLNEKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRV---DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGAT   88 (115)
Q Consensus        14 ~~~~~~~lvtG~~--~giG~~~a~~l~~~g~~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~   88 (115)
                      .+.+|+++|||++  +|||+++|++|++.|++|++++|+.   +.++++.++++         ..++..+.+|++ ++++
T Consensus         4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~---------~~~~~~~~~Dv~-d~~~   73 (257)
T PRK08594          4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE---------GQESLLLPCDVT-SDEE   73 (257)
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC---------CCceEEEecCCC-CHHH
Confidence            4679999999997  8999999999999999999988753   23333333332         146778999996 8999


Q ss_pred             HHHHHHHHHHHcCCccEEEeCCccC
Q 033624           89 IEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        89 ~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      ++.+++++.+.++++|++|||||+.
T Consensus        74 v~~~~~~~~~~~g~ld~lv~nag~~   98 (257)
T PRK08594         74 ITACFETIKEEVGVIHGVAHCIAFA   98 (257)
T ss_pred             HHHHHHHHHHhCCCccEEEECcccC
Confidence            9999999999999999999999975

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.77  E-value=2.1e-17  Score=109.89  Aligned_cols=93  Identities=35%  Similarity=0.574  Sum_probs=79.3

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      +.++.+++++|||+++|||.+++++|++.|++|++++|+ ...+++.+.+...+       .++.++.+|++ +.+++..
T Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~i~~   80 (258)
T PRK06935         10 FFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEG-------RKVTFVQVDLT-KPESAEK   80 (258)
T ss_pred             cccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcC-------CceEEEEcCCC-CHHHHHH
Confidence            345789999999999999999999999999999999988 55555555554332       46788999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++++.+.++++|++|||||..
T Consensus        81 ~~~~~~~~~g~id~li~~ag~~  102 (258)
T PRK06935         81 VVKEALEEFGKIDILVNNAGTI  102 (258)
T ss_pred             HHHHHHHHcCCCCEEEECCCCC
Confidence            9999999999999999999974

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.77  E-value=2e-17  Score=110.48  Aligned_cols=94  Identities=31%  Similarity=0.384  Sum_probs=83.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .++.+++++|||++++||.+++++|+++|++|++.+|+.+..++..+.++..+       .++..+.+|++ ++++++.+
T Consensus         6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~-~~~~~~~~   77 (265)
T PRK07097          6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELG-------IEAHGYVCDVT-DEDGVQAM   77 (265)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcC-------CceEEEEcCCC-CHHHHHHH
Confidence            35678999999999999999999999999999999999888877777776432       46888999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++...++++|+||||||+..
T Consensus        78 ~~~~~~~~~~id~li~~ag~~~   99 (265)
T PRK07097         78 VSQIEKEVGVIDILVNNAGIIK   99 (265)
T ss_pred             HHHHHHhCCCCCEEEECCCCCC
Confidence            9999999999999999999854

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.5e-17  Score=110.36  Aligned_cols=91  Identities=46%  Similarity=0.618  Sum_probs=80.3

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +.+++++|||++++||++++++|+++|++|++++|+.+..++..+.+...+       .++.++.+|++ ++++++.+++
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~~~   74 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLG-------RRALAVPTDIT-DEDQCANLVA   74 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhC-------CceEEEecCCC-CHHHHHHHHH
Confidence            468999999999999999999999999999999999887777777765432       46788999996 8999999999


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                      ++.+.++++|++|||||..
T Consensus        75 ~~~~~~g~~d~vi~~ag~~   93 (258)
T PRK07890         75 LALERFGRVDALVNNAFRV   93 (258)
T ss_pred             HHHHHcCCccEEEECCccC
Confidence            9999999999999999874

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.76  E-value=2.2e-17  Score=109.08  Aligned_cols=92  Identities=34%  Similarity=0.543  Sum_probs=79.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++++++++|||++++||..++++|+++|++|++++|+.+..+...+.++...       .++..+.+|++ +.++++.++
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~-~~~~~~~~~   74 (250)
T PRK07774          3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADG-------GTAIAVQVDVS-DPDSAKAMA   74 (250)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEEcCCC-CHHHHHHHH
Confidence            4678999999999999999999999999999999999877766666665322       35678899996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|+||||||+.
T Consensus        75 ~~~~~~~~~id~vi~~ag~~   94 (250)
T PRK07774         75 DATVSAFGGIDYLVNNAAIY   94 (250)
T ss_pred             HHHHHHhCCCCEEEECCCCc
Confidence            99999999999999999975

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.76  E-value=1.8e-17  Score=113.48  Aligned_cols=90  Identities=29%  Similarity=0.345  Sum_probs=78.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhC-CeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      ++++++|||+++|||+++++.|+++| ++|++++|+.+..++..+.+...       ..++..+.+|++ +.++++.+++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dl~-~~~~v~~~~~   73 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMP-------KDSYTIMHLDLG-SLDSVRQFVQ   73 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCC-------CCeEEEEEcCCC-CHHHHHHHHH
Confidence            47899999999999999999999999 99999999988777777666432       245778899995 8999999999


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                      ++.+.++++|+||||||+.
T Consensus        74 ~~~~~~~~iD~lI~nAG~~   92 (314)
T TIGR01289        74 QFRESGRPLDALVCNAAVY   92 (314)
T ss_pred             HHHHhCCCCCEEEECCCcc
Confidence            9988889999999999975

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08643 acetoin reductase; Validated

Probab=99.76  E-value=2e-17  Score=109.80  Aligned_cols=89  Identities=30%  Similarity=0.533  Sum_probs=79.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +|+++|||++++||..+++.|+++|++|++++|+.+..++....+...+       .++.++.+|++ ++++++.+++++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~-~~~~~~~~~~~~   73 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDG-------GKAIAVKADVS-DRDQVFAAVRQV   73 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CeEEEEECCCC-CHHHHHHHHHHH
Confidence            6899999999999999999999999999999999888777777775432       45778999996 899999999999


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                      .+.++++|++|||||+.
T Consensus        74 ~~~~~~id~vi~~ag~~   90 (256)
T PRK08643         74 VDTFGDLNVVVNNAGVA   90 (256)
T ss_pred             HHHcCCCCEEEECCCCC
Confidence            99999999999999975

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.76  E-value=1.1e-17  Score=106.09  Aligned_cols=93  Identities=29%  Similarity=0.382  Sum_probs=82.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+..+.++|||+++|||+++++.|++.|++|++++++.+..++....+...        .....+.||++ +..+++..+
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~--------~~h~aF~~DVS-~a~~v~~~l   81 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY--------GDHSAFSCDVS-KAHDVQNTL   81 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC--------CccceeeeccC-cHHHHHHHH
Confidence            456889999999999999999999999999999999988877777776542        35678999995 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRGN  115 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~~  115 (115)
                      ++..+.++++++||||||+..|
T Consensus        82 ~e~~k~~g~psvlVncAGItrD  103 (256)
T KOG1200|consen   82 EEMEKSLGTPSVLVNCAGITRD  103 (256)
T ss_pred             HHHHHhcCCCcEEEEcCccccc
Confidence            9999999999999999999754

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.76  E-value=3.2e-17  Score=108.91  Aligned_cols=92  Identities=43%  Similarity=0.701  Sum_probs=81.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++++++++|||++++||..+++.|+++|++|++++|+++..++..+.++..+       .++.++.+|++ +.++++.++
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~-~~~~~~~~~   75 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAG-------GKAIGVAMDVT-NEDAVNAGI   75 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcC-------ceEEEEECCCC-CHHHHHHHH
Confidence            4668999999999999999999999999999999999988888777776543       46778999995 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|++|||||..
T Consensus        76 ~~~~~~~~~~d~vi~~ag~~   95 (262)
T PRK13394         76 DKVAERFGSVDILVSNAGIQ   95 (262)
T ss_pred             HHHHHHcCCCCEEEECCccC
Confidence            99988899999999999975

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.76  E-value=3.3e-17  Score=109.39  Aligned_cols=92  Identities=37%  Similarity=0.553  Sum_probs=80.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+++++|||+++|||.+++++|+++|++|++++|+.+..++..+.++..+       .++.++.+|++ +++++..++
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~D~~-~~~~~~~~~   78 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAG-------RRAHVVAADLA-HPEATAGLA   78 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEEccCC-CHHHHHHHH
Confidence            4678999999999999999999999999999999999887777777665432       46788899996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|++|||||..
T Consensus        79 ~~~~~~~~~id~vi~~Ag~~   98 (263)
T PRK07814         79 GQAVEAFGRLDIVVNNVGGT   98 (263)
T ss_pred             HHHHHHcCCCCEEEECCCCC
Confidence            99999999999999999964

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.76  E-value=2e-17  Score=110.41  Aligned_cols=91  Identities=18%  Similarity=0.171  Sum_probs=73.4

Q ss_pred             CCCCcEEEEecCCC--hHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           14 DLNEKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        14 ~~~~~~~lvtG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .+.+|+++|||+++  |||+++|+.|+++|++|++.+|+. ..++..+++....       .....+++|++ ++++++.
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~-------g~~~~~~~Dv~-~~~~v~~   75 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEI-------GCNFVSELDVT-NPKSISN   75 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhc-------CCceEEEccCC-CHHHHHH
Confidence            45789999999997  999999999999999999988873 3333444443321       11246789996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++++.++++++|+||||||+.
T Consensus        76 ~~~~~~~~~g~iDilVnnag~~   97 (260)
T PRK06603         76 LFDDIKEKWGSFDFLLHGMAFA   97 (260)
T ss_pred             HHHHHHHHcCCccEEEEccccC
Confidence            9999999999999999999974

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.76  E-value=1.7e-17  Score=110.60  Aligned_cols=89  Identities=19%  Similarity=0.261  Sum_probs=74.0

Q ss_pred             CCCCcEEEEecC--CChHHHHHHHHHHHhCCeEEEEeccc--chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHH
Q 033624           14 DLNEKVVMVTGA--SSGLGREFCLDLAKAGCRIVAAARRV--DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATI   89 (115)
Q Consensus        14 ~~~~~~~lvtG~--~~giG~~~a~~l~~~g~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~   89 (115)
                      .+.+|+++|||+  ++|||++++++|+++|++|++++|+.  +..++..+.+.          .++.++.+|++ +++++
T Consensus         4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~----------~~~~~~~~Dv~-~~~~i   72 (256)
T PRK07889          4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP----------EPAPVLELDVT-NEEHL   72 (256)
T ss_pred             cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC----------CCCcEEeCCCC-CHHHH
Confidence            367899999999  89999999999999999999998764  23344433331          24668899996 89999


Q ss_pred             HHHHHHHHHHcCCccEEEeCCccC
Q 033624           90 EISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        90 ~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      +.+++++.+.++++|+||||||+.
T Consensus        73 ~~~~~~~~~~~g~iD~li~nAG~~   96 (256)
T PRK07889         73 ASLADRVREHVDGLDGVVHSIGFA   96 (256)
T ss_pred             HHHHHHHHHHcCCCcEEEEccccc
Confidence            999999999999999999999985

>PRK05599 hypothetical protein; Provisional

Probab=99.76  E-value=2e-17  Score=109.61  Aligned_cols=89  Identities=25%  Similarity=0.344  Sum_probs=77.7

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      ++++|||+++|||+++|++|+ +|++|++++|+.+.+++..+.++..+      ...+.++.+|++ ++++++.+++++.
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~------~~~~~~~~~Dv~-d~~~v~~~~~~~~   72 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRG------ATSVHVLSFDAQ-DLDTHRELVKQTQ   72 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcc------CCceEEEEcccC-CHHHHHHHHHHHH
Confidence            368999999999999999999 59999999999988888888886543      124778999996 8999999999999


Q ss_pred             HHcCCccEEEeCCccCC
Q 033624           98 EAFGRVDALVNNAGIRG  114 (115)
Q Consensus        98 ~~~~~id~li~naG~~~  114 (115)
                      +.++++|++|||||+..
T Consensus        73 ~~~g~id~lv~nag~~~   89 (246)
T PRK05599         73 ELAGEISLAVVAFGILG   89 (246)
T ss_pred             HhcCCCCEEEEecCcCC
Confidence            99999999999999853

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.76  E-value=2.9e-17  Score=109.81  Aligned_cols=93  Identities=27%  Similarity=0.459  Sum_probs=80.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+.+++++|||+++|||..++++|+++|++|++++|+.+..+...+.+...+       .++.++.+|++ +++++..+
T Consensus         5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~-~~~~i~~~   76 (264)
T PRK07576          5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAG-------PEGLGVSADVR-DYAAVEAA   76 (264)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC-------CceEEEECCCC-CHHHHHHH
Confidence            35679999999999999999999999999999999999887776666665432       35678899996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|++|||||..
T Consensus        77 ~~~~~~~~~~iD~vi~~ag~~   97 (264)
T PRK07576         77 FAQIADEFGPIDVLVSGAAGN   97 (264)
T ss_pred             HHHHHHHcCCCCEEEECCCCC
Confidence            999999899999999999853

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.75  E-value=3.8e-17  Score=108.65  Aligned_cols=91  Identities=36%  Similarity=0.523  Sum_probs=76.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+++++++|||+++|||++++++|+++|++|++++|+.. .....+.+...+       .++.++.+|++ +++++..++
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~~   75 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAG-------GEALALTADLE-TYAGAQAAM   75 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcC-------CeEEEEEEeCC-CHHHHHHHH
Confidence            467899999999999999999999999999999999753 344555554332       46778999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|+||||||..
T Consensus        76 ~~~~~~~~~id~lv~nAg~~   95 (260)
T PRK12823         76 AAAVEAFGRIDVLINNVGGT   95 (260)
T ss_pred             HHHHHHcCCCeEEEECCccc
Confidence            99999999999999999853

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.75  E-value=2.8e-17  Score=109.61  Aligned_cols=88  Identities=34%  Similarity=0.476  Sum_probs=75.7

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +.+++++|||+++|||++++++|+++|++|++++|+.+..+++.+..          +.++..+.+|++ +++++..+++
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~----------~~~~~~~~~D~~-~~~~~~~~~~   71 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH----------GDAVVGVEGDVR-SLDDHKEAVA   71 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc----------CCceEEEEeccC-CHHHHHHHHH
Confidence            56899999999999999999999999999999999876665543321          135778999995 8999999999


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                      ++.+.++++|+||||||+.
T Consensus        72 ~~~~~~g~id~li~~Ag~~   90 (262)
T TIGR03325        72 RCVAAFGKIDCLIPNAGIW   90 (262)
T ss_pred             HHHHHhCCCCEEEECCCCC
Confidence            9999999999999999974

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.75  E-value=3.5e-17  Score=108.75  Aligned_cols=91  Identities=37%  Similarity=0.562  Sum_probs=79.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+++++|||++++||+.++++|+++|++|++++|+.+.. +..+.++..+       .++.++.+|++ +++++..++
T Consensus         4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~~   74 (258)
T PRK08628          4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQ-------PRAEFVQVDLT-DDAQCRDAV   74 (258)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcC-------CceEEEEccCC-CHHHHHHHH
Confidence            57799999999999999999999999999999999987766 5556665433       46788999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|++|||||..
T Consensus        75 ~~~~~~~~~id~vi~~ag~~   94 (258)
T PRK08628         75 EQTVAKFGRIDGLVNNAGVN   94 (258)
T ss_pred             HHHHHhcCCCCEEEECCccc
Confidence            99999999999999999964

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.75  E-value=4.8e-17  Score=109.25  Aligned_cols=92  Identities=36%  Similarity=0.524  Sum_probs=77.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch-------HHHHHHHhhCCCCCCCCCccceEEEEeecCCCH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-------LKSLCDEINKPGMVGSPDSVRAVAVELDVCADG   86 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~   86 (115)
                      ++.+++++|||+++|||..+++.|+++|++|++++|+.+.       +++..+.++..+       .++.++.+|++ ++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-------~~~~~~~~D~~-~~   74 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAG-------GQALPLVGDVR-DE   74 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcC-------CceEEEEecCC-CH
Confidence            3578999999999999999999999999999999987642       334444554332       46888999996 89


Q ss_pred             HHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           87 ATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        87 ~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++..+++++.+.++++|++|||||+.
T Consensus        75 ~~i~~~~~~~~~~~g~id~li~~ag~~  101 (273)
T PRK08278         75 DQVAAAVAKAVERFGGIDICVNNASAI  101 (273)
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCCCc
Confidence            999999999999999999999999974

>PRK09242 tropinone reductase; Provisional

Probab=99.75  E-value=4e-17  Score=108.49  Aligned_cols=96  Identities=24%  Similarity=0.326  Sum_probs=83.3

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .+.+.+|+++|||+++|||+.+++.|+++|++|++++|+.+..++..+.+....     .+.++..+.+|++ +++++..
T Consensus         4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~~Dl~-~~~~~~~   77 (257)
T PRK09242          4 RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEF-----PEREVHGLAADVS-DDEDRRA   77 (257)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhC-----CCCeEEEEECCCC-CHHHHHH
Confidence            356789999999999999999999999999999999999888877777775431     1246888999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++++.+.++++|++|||||..
T Consensus        78 ~~~~~~~~~g~id~li~~ag~~   99 (257)
T PRK09242         78 ILDWVEDHWDGLHILVNNAGGN   99 (257)
T ss_pred             HHHHHHHHcCCCCEEEECCCCC
Confidence            9999999999999999999974

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.75  E-value=5.1e-17  Score=107.86  Aligned_cols=93  Identities=31%  Similarity=0.502  Sum_probs=82.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+++++++|||++++||+.++++|+++|++|++++|+.+.+++..+.++..+       .++.++.+|++ +++++..+
T Consensus         7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~-~~~~~~~~   78 (256)
T PRK06124          7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAG-------GAAEALAFDIA-DEEAVAAA   78 (256)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcC-------CceEEEEccCC-CHHHHHHH
Confidence            34679999999999999999999999999999999999887777777776543       45788999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++...++++|++|||+|..
T Consensus        79 ~~~~~~~~~~id~vi~~ag~~   99 (256)
T PRK06124         79 FARIDAEHGRLDILVNNVGAR   99 (256)
T ss_pred             HHHHHHhcCCCCEEEECCCCC
Confidence            999999999999999999974

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.75  E-value=3.9e-17  Score=109.43  Aligned_cols=88  Identities=32%  Similarity=0.408  Sum_probs=77.0

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +.+++++|||+++|||+.++++|+++|++|++++|+.+..++..+.+.           ++..+.+|++ +++++..+++
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----------~~~~~~~D~~-~~~~~~~~~~   70 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG-----------LVVGGPLDVT-DPASFAAFLD   70 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-----------cceEEEccCC-CHHHHHHHHH
Confidence            568899999999999999999999999999999999887766655542           3667899996 8999999999


Q ss_pred             HHHHHcCCccEEEeCCccCC
Q 033624           95 KAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~~  114 (115)
                      .+.+.++++|++|||||+..
T Consensus        71 ~~~~~~~~id~li~~ag~~~   90 (273)
T PRK07825         71 AVEADLGPIDVLVNNAGVMP   90 (273)
T ss_pred             HHHHHcCCCCEEEECCCcCC
Confidence            99999999999999999753

>PRK09186 flagellin modification protein A; Provisional

Probab=99.75  E-value=4.8e-17  Score=107.84  Aligned_cols=93  Identities=30%  Similarity=0.423  Sum_probs=78.8

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +.+++++|||+++|||+.+++.|+++|++|++++|+.+..++..+.+....     ....+.++.+|++ +++++..+++
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~~Dl~-d~~~~~~~~~   75 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEF-----KSKKLSLVELDIT-DQESLEEFLS   75 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhc-----CCCceeEEEecCC-CHHHHHHHHH
Confidence            468999999999999999999999999999999999888877777764321     1124566799996 8999999999


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                      ++.+.++++|++|||||..
T Consensus        76 ~~~~~~~~id~vi~~A~~~   94 (256)
T PRK09186         76 KSAEKYGKIDGAVNCAYPR   94 (256)
T ss_pred             HHHHHcCCccEEEECCccc
Confidence            9999999999999999753

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.75  E-value=3.6e-17  Score=109.97  Aligned_cols=91  Identities=19%  Similarity=0.218  Sum_probs=72.3

Q ss_pred             CCCCcEEEEecCC--ChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           14 DLNEKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        14 ~~~~~~~lvtG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .+.+|+++|||++  +|||+++|+.|+++|++|++++|+.. ..+..+++.+..       .....+++|++ ++++++.
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~-------~~~~~~~~Dl~-~~~~v~~   77 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAEL-------GAFVAGHCDVT-DEASIDA   77 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhc-------CCceEEecCCC-CHHHHHH
Confidence            4568999999996  89999999999999999999887632 222233332211       12456899996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++++.++++++|+||||||+.
T Consensus        78 ~~~~~~~~~g~iD~lv~nAG~~   99 (272)
T PRK08159         78 VFETLEKKWGKLDFVVHAIGFS   99 (272)
T ss_pred             HHHHHHHhcCCCcEEEECCccc
Confidence            9999999999999999999975

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.75  E-value=4.7e-17  Score=107.90  Aligned_cols=89  Identities=35%  Similarity=0.539  Sum_probs=78.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +|+++|||+++|||++++++|+++|++|++++|+.+..++..+.+...+       .++.++++|++ ++++++++++++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~~~~~   72 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFP-------GQVLTVQMDVR-NPEDVQKMVEQI   72 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEEecCC-CHHHHHHHHHHH
Confidence            5789999999999999999999999999999999887777776665432       46888999996 899999999999


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                      .+.++++|++|||||..
T Consensus        73 ~~~~~~id~lI~~ag~~   89 (252)
T PRK07677         73 DEKFGRIDALINNAAGN   89 (252)
T ss_pred             HHHhCCccEEEECCCCC
Confidence            99999999999999863

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.74  E-value=3.5e-17  Score=108.98  Aligned_cols=86  Identities=35%  Similarity=0.519  Sum_probs=76.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      +++|||+++|||++++++|+++|++|++++|+.+..++..++++..        .++.++.+|++ ++++++.+++++.+
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--------~~~~~~~~Dv~-d~~~~~~~~~~~~~   72 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY--------GEVYAVKADLS-DKDDLKNLVKEAWE   72 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--------CCceEEEcCCC-CHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999988888777777542        25678999996 89999999999999


Q ss_pred             HcCCccEEEeCCccC
Q 033624           99 AFGRVDALVNNAGIR  113 (115)
Q Consensus        99 ~~~~id~li~naG~~  113 (115)
                      .++++|+||||||+.
T Consensus        73 ~~g~id~li~naG~~   87 (259)
T PRK08340         73 LLGGIDALVWNAGNV   87 (259)
T ss_pred             hcCCCCEEEECCCCC
Confidence            999999999999974

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.74  E-value=6e-17  Score=106.98  Aligned_cols=92  Identities=30%  Similarity=0.452  Sum_probs=79.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +++++|||+++|||++++++|+++|++|++++|+.+..++....+....     .+.++.++.+|++ +++++..+++++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~-~~~~~~~~~~~~   75 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARY-----PGIKVAVAALDVN-DHDQVFEVFAEF   75 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhC-----CCceEEEEEcCCC-CHHHHHHHHHHH
Confidence            6789999999999999999999999999999999888777766665421     1246889999996 899999999999


Q ss_pred             HHHcCCccEEEeCCccCC
Q 033624           97 WEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        97 ~~~~~~id~li~naG~~~  114 (115)
                      .+.++++|++|||||+..
T Consensus        76 ~~~~~~id~vi~~ag~~~   93 (248)
T PRK08251         76 RDELGGLDRVIVNAGIGK   93 (248)
T ss_pred             HHHcCCCCEEEECCCcCC
Confidence            999999999999999753

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.74  E-value=7.2e-17  Score=107.34  Aligned_cols=93  Identities=40%  Similarity=0.611  Sum_probs=81.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .++++++++|||++++||..++++|+++|++|++++|+.+..+...+.+...+       .++.++.+|++ ++++++.+
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~-------~~~~~~~~Dl~-d~~~i~~~   79 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALG-------IDALWIAADVA-DEADIERL   79 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-------CeEEEEEccCC-CHHHHHHH
Confidence            45679999999999999999999999999999999999887777777665432       46778999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|++|||||..
T Consensus        80 ~~~~~~~~~~id~vi~~ag~~  100 (259)
T PRK08213         80 AEETLERFGHVDILVNNAGAT  100 (259)
T ss_pred             HHHHHHHhCCCCEEEECCCCC
Confidence            999999899999999999974

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1e-16  Score=105.82  Aligned_cols=92  Identities=36%  Similarity=0.509  Sum_probs=81.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+++++|||++++||..+++.|+++|++|++++|+.+..+...+.++..+       .++..+.+|++ ++++++.++
T Consensus         4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~-~~~~~~~~~   75 (250)
T PRK12939          4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAG-------GRAHAIAADLA-DPASVQRFF   75 (250)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEEccCC-CHHHHHHHH
Confidence            4568999999999999999999999999999999999888777777775432       46888999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|++|||+|..
T Consensus        76 ~~~~~~~~~id~vi~~ag~~   95 (250)
T PRK12939         76 DAAAAALGGLDGLVNNAGIT   95 (250)
T ss_pred             HHHHHHcCCCCEEEECCCCC
Confidence            99999889999999999975

>PRK06128 oxidoreductase; Provisional

Probab=99.74  E-value=6e-17  Score=110.10  Aligned_cols=92  Identities=30%  Similarity=0.417  Sum_probs=77.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc--hHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD--RLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .+.+|+++|||+++|||+++++.|+++|++|++..++.+  ..++..+.++..+       .++.++.+|++ +.++++.
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~-~~~~v~~  123 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEG-------RKAVALPGDLK-DEAFCRQ  123 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcC-------CeEEEEecCCC-CHHHHHH
Confidence            467899999999999999999999999999998876543  3445555555432       46778999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++++.+.++++|+||||||+.
T Consensus       124 ~~~~~~~~~g~iD~lV~nAg~~  145 (300)
T PRK06128        124 LVERAVKELGGLDILVNIAGKQ  145 (300)
T ss_pred             HHHHHHHHhCCCCEEEECCccc
Confidence            9999999999999999999974

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.74  E-value=8.4e-17  Score=106.88  Aligned_cols=91  Identities=34%  Similarity=0.529  Sum_probs=75.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .++.+++++|||+++|||.+++++|++.|++|++++++..  .+..+.+...+       .++..+++|++ +.++++.+
T Consensus         6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~-------~~~~~~~~Dl~-~~~~~~~~   75 (253)
T PRK08993          6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALG-------RRFLSLTADLR-KIDGIPAL   75 (253)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhcC-------CeEEEEECCCC-CHHHHHHH
Confidence            4578999999999999999999999999999998876532  33344444322       45788999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.++++++|++|||||+.
T Consensus        76 ~~~~~~~~~~~D~li~~Ag~~   96 (253)
T PRK08993         76 LERAVAEFGHIDILVNNAGLI   96 (253)
T ss_pred             HHHHHHHhCCCCEEEECCCCC
Confidence            999999999999999999975

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1.2e-16  Score=106.43  Aligned_cols=95  Identities=35%  Similarity=0.431  Sum_probs=80.3

Q ss_pred             CCCCCcEEEEecCCC-hHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           13 HDLNEKVVMVTGASS-GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~-giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ..+.+++++|||+++ |||+++++.|+++|++|++++|+.+.+++..+.++...     ...++..+.+|++ ++++++.
T Consensus        13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~-~~~~~~~   86 (262)
T PRK07831         13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAEL-----GLGRVEAVVCDVT-SEAQVDA   86 (262)
T ss_pred             cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhc-----CCceEEEEEccCC-CHHHHHH
Confidence            345689999999985 99999999999999999999999887777777665421     1135778999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++++.+.++++|++|||||+.
T Consensus        87 ~~~~~~~~~g~id~li~~ag~~  108 (262)
T PRK07831         87 LIDAAVERLGRLDVLVNNAGLG  108 (262)
T ss_pred             HHHHHHHHcCCCCEEEECCCCC
Confidence            9999989999999999999974

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.74  E-value=7.1e-17  Score=107.39  Aligned_cols=88  Identities=31%  Similarity=0.472  Sum_probs=76.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +++++|||+++|||.+++++|+++|++|++++|+.+..++..+.+...        .++.++.+|++ +++++.++++++
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~Dl~-~~~~i~~~~~~~   72 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA--------ARVSVYAADVR-DADALAAAAADF   72 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC--------CeeEEEEcCCC-CHHHHHHHHHHH
Confidence            468999999999999999999999999999999987776666555321        26788999996 899999999999


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                      .++++++|++|||||+.
T Consensus        73 ~~~~g~id~lv~~ag~~   89 (257)
T PRK07024         73 IAAHGLPDVVIANAGIS   89 (257)
T ss_pred             HHhCCCCCEEEECCCcC
Confidence            99999999999999975

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.5e-16  Score=105.59  Aligned_cols=93  Identities=48%  Similarity=0.656  Sum_probs=81.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+.+++++|||++++||+.+++.|+++|++|++++|+.+.+++....+....       .++..+.+|++ +++++..+
T Consensus         5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~D~~-~~~~~~~~   76 (258)
T PRK06949          5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEG-------GAAHVVSLDVT-DYQSIKAA   76 (258)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEEecCC-CHHHHHHH
Confidence            34678999999999999999999999999999999999888877777665432       45788999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|++|||+|+.
T Consensus        77 ~~~~~~~~~~~d~li~~ag~~   97 (258)
T PRK06949         77 VAHAETEAGTIDILVNNSGVS   97 (258)
T ss_pred             HHHHHHhcCCCCEEEECCCCC
Confidence            999999999999999999964

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.73  E-value=1.1e-16  Score=105.69  Aligned_cols=91  Identities=40%  Similarity=0.574  Sum_probs=76.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++++|+++|||++++||.+++++|+++|++|++++|+..  .+..+.++..+       .++..+.+|++ +++++..++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~~   71 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEALG-------RRFLSLTADLS-DIEAIKALV   71 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhcC-------CceEEEECCCC-CHHHHHHHH
Confidence            367999999999999999999999999999999998652  33444444322       45788999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+.++++|++|||||+..
T Consensus        72 ~~~~~~~~~~d~li~~ag~~~   92 (248)
T TIGR01832        72 DSAVEEFGHIDILVNNAGIIR   92 (248)
T ss_pred             HHHHHHcCCCCEEEECCCCCC
Confidence            999888999999999999753

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.2e-16  Score=105.70  Aligned_cols=90  Identities=37%  Similarity=0.512  Sum_probs=79.3

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +.+++++|||++++||..++++|+++|++|++++|+.+......+.+. .       +.++..+++|++ ++++++.+++
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~-------~~~~~~~~~D~~-~~~~~~~~~~   73 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-A-------GGRAFARQGDVG-SAEAVEALVD   73 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-c-------CCeEEEEEcCCC-CHHHHHHHHH
Confidence            578999999999999999999999999999999999877766666654 1       246788999996 8999999999


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                      .+.+.++++|++|||+|..
T Consensus        74 ~i~~~~~~id~vi~~ag~~   92 (252)
T PRK06138         74 FVAARWGRLDVLVNNAGFG   92 (252)
T ss_pred             HHHHHcCCCCEEEECCCCC
Confidence            9999999999999999975

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.73  E-value=1.1e-16  Score=106.32  Aligned_cols=89  Identities=37%  Similarity=0.487  Sum_probs=78.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+++++|||++++||.++++.|+++|++|++++|+.+..++..+.+.          .++.++.+|++ +++++..++
T Consensus         3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~-~~~~~~~~~   71 (257)
T PRK07067          3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG----------PAAIAVSLDVT-RQDSIDRIV   71 (257)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC----------CceEEEEccCC-CHHHHHHHH
Confidence            3668999999999999999999999999999999999887776665542          24778899996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|++|||||..
T Consensus        72 ~~~~~~~~~id~li~~ag~~   91 (257)
T PRK07067         72 AAAVERFGGIDILFNNAALF   91 (257)
T ss_pred             HHHHHHcCCCCEEEECCCcC
Confidence            99999999999999999974

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.6e-16  Score=105.75  Aligned_cols=92  Identities=36%  Similarity=0.499  Sum_probs=76.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc-cchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      +..+++++|||++++||+.++++|+++|++|+++.++ .+..+...+.+...+       .++.++.+|++ +.+++..+
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~-d~~~~~~~   77 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALG-------RRAVALQADLA-DEAEVRAL   77 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-------CeEEEEEcCCC-CHHHHHHH
Confidence            4568999999999999999999999999999887654 455555555554332       46788999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++...++++|++|||||..
T Consensus        78 ~~~~~~~~~~iD~vi~~ag~~   98 (258)
T PRK09134         78 VARASAALGPITLLVNNASLF   98 (258)
T ss_pred             HHHHHHHcCCCCEEEECCcCC
Confidence            999988899999999999974

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.2e-16  Score=106.44  Aligned_cols=91  Identities=34%  Similarity=0.527  Sum_probs=76.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+++++|||++++||+.++++|+++|++|++++|+.. .....+.+...+       .++..+.+|++ ++++++.++
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~-------~~~~~~~~Dl~-~~~~v~~~~   73 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRG-------HRCTAVVADVR-DPASVAAAI   73 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhC-------CceEEEECCCC-CHHHHHHHH
Confidence            467899999999999999999999999999999999864 333444443322       45778899996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|++|||||+.
T Consensus        74 ~~~~~~~~~id~vi~~ag~~   93 (263)
T PRK08226         74 KRAKEKEGRIDILVNNAGVC   93 (263)
T ss_pred             HHHHHHcCCCCEEEECCCcC
Confidence            99999999999999999974

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.73  E-value=1.2e-16  Score=105.16  Aligned_cols=92  Identities=34%  Similarity=0.573  Sum_probs=80.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+++++|||++++||..++++|+++|++|++++|+.+..++..+.+...+       .++.++.+|++ +++++..++
T Consensus         4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~~   75 (239)
T PRK07666          4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYG-------VKVVIATADVS-DYEEVTAAI   75 (239)
T ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC-------CeEEEEECCCC-CHHHHHHHH
Confidence            3567899999999999999999999999999999999887777766665432       46888999995 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +.+.+.++++|++|||+|..
T Consensus        76 ~~~~~~~~~id~vi~~ag~~   95 (239)
T PRK07666         76 EQLKNELGSIDILINNAGIS   95 (239)
T ss_pred             HHHHHHcCCccEEEEcCccc
Confidence            99988999999999999864

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.73  E-value=1.3e-16  Score=105.63  Aligned_cols=91  Identities=43%  Similarity=0.650  Sum_probs=80.6

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +.+++++|||++++||..++++|+++|++|++++|+.+..+...+.++..+       .++..+.+|++ ++++++.+++
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~-~~~~~~~~~~   73 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAG-------GKAIGVAMDVT-DEEAINAGID   73 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEEcCCC-CHHHHHHHHH
Confidence            467899999999999999999999999999999999888877777776432       46888999996 8999999999


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                      ++.+.++++|++|||||..
T Consensus        74 ~~~~~~~~~d~vi~~a~~~   92 (258)
T PRK12429         74 YAVETFGGVDILVNNAGIQ   92 (258)
T ss_pred             HHHHHcCCCCEEEECCCCC
Confidence            9999999999999999864

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.73  E-value=1.5e-16  Score=105.06  Aligned_cols=90  Identities=46%  Similarity=0.638  Sum_probs=79.4

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +.+++++|||++++||..++++|+++|++|++++|+.+..+.....+.. +       .++.++.+|++ ++++++.+++
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~-------~~~~~~~~D~~-~~~~~~~~~~   73 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-G-------GRAIAVAADVS-DEADVEAAVA   73 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-C-------CeEEEEECCCC-CHHHHHHHHH
Confidence            5688999999999999999999999999999999998877776666643 1       45788999996 8999999999


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                      ++...++++|++|||+|..
T Consensus        74 ~~~~~~~~~d~vi~~ag~~   92 (251)
T PRK07231         74 AALERFGSVDILVNNAGTT   92 (251)
T ss_pred             HHHHHhCCCCEEEECCCCC
Confidence            9988999999999999974

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.73  E-value=3.9e-17  Score=109.64  Aligned_cols=92  Identities=27%  Similarity=0.423  Sum_probs=74.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .|++++|||+++|||++.|++|+++|.+|++++|+.++++...+++....      +.++..+.+|.+++.+..+.+.+.
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~------~vev~~i~~Dft~~~~~ye~i~~~  121 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKY------KVEVRIIAIDFTKGDEVYEKLLEK  121 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHh------CcEEEEEEEecCCCchhHHHHHHH
Confidence            47999999999999999999999999999999999999999999998764      367889999998554433333332


Q ss_pred             HHHHcCCccEEEeCCccCCC
Q 033624           96 AWEAFGRVDALVNNAGIRGN  115 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~~~  115 (115)
                      + +. ..+-+||||+|+..+
T Consensus       122 l-~~-~~VgILVNNvG~~~~  139 (312)
T KOG1014|consen  122 L-AG-LDVGILVNNVGMSYD  139 (312)
T ss_pred             h-cC-CceEEEEecccccCC
Confidence            2 21 257799999999864

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.73  E-value=1.6e-16  Score=105.48  Aligned_cols=92  Identities=33%  Similarity=0.515  Sum_probs=80.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+++++|||++++||..+++.|+++|++|++++|+.+..+....+++..+       .++..+.+|++ +++++..++
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~D~~-~~~~i~~~~   79 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG-------GQAFACRCDIT-SEQELSALA   79 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEEccCC-CHHHHHHHH
Confidence            4679999999999999999999999999999999998887777777765432       46778899996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      ..+.+.++++|++|||||+.
T Consensus        80 ~~~~~~~~~~d~li~~ag~~   99 (255)
T PRK06113         80 DFALSKLGKVDILVNNAGGG   99 (255)
T ss_pred             HHHHHHcCCCCEEEECCCCC
Confidence            99989999999999999974

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.73  E-value=1.9e-16  Score=105.46  Aligned_cols=93  Identities=37%  Similarity=0.582  Sum_probs=78.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc-chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .+.+++++|||++++||.+++++|+++|++|++..|+. +......+.++..+       .++.++.+|++ +.+++..+
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~Dl~-~~~~i~~~   75 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAG-------GEAIAVKGDVT-VESDVVNL   75 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcC-------CeEEEEEecCC-CHHHHHHH
Confidence            46799999999999999999999999999999888754 44555666665432       46778999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++.+.+.++++|++|||||...
T Consensus        76 ~~~~~~~~g~id~lv~~ag~~~   97 (261)
T PRK08936         76 IQTAVKEFGTLDVMINNAGIEN   97 (261)
T ss_pred             HHHHHHHcCCCCEEEECCCCCC
Confidence            9999999999999999999753

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.9e-16  Score=104.30  Aligned_cols=90  Identities=37%  Similarity=0.584  Sum_probs=78.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .+++++|||++++||+.++++|+++|++|++++|+.+..+...+.++..+       .++.++.+|++ +++++..+++.
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~~~~   76 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTG-------VKAAAYSIDLS-NPEAIAPGIAE   76 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCC-------CcEEEEEccCC-CHHHHHHHHHH
Confidence            46899999999999999999999999999999999887777766665432       46788999996 89999999999


Q ss_pred             HHHHcCCccEEEeCCccC
Q 033624           96 AWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~  113 (115)
                      +.+.++++|++|||||..
T Consensus        77 ~~~~~~~id~lv~~ag~~   94 (241)
T PRK07454         77 LLEQFGCPDVLINNAGMA   94 (241)
T ss_pred             HHHHcCCCCEEEECCCcc
Confidence            999999999999999974

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=1.5e-16  Score=105.07  Aligned_cols=91  Identities=36%  Similarity=0.513  Sum_probs=78.0

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEE-EecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVA-AARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      +.+++++|||++++||+.++++|+++|++|++ ..|+.+..++..+.++..+       .++.++.+|++ +++++..++
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~~   73 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALG-------RKALAVKANVG-DVEKIKEMF   73 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-------CeEEEEEcCCC-CHHHHHHHH
Confidence            35789999999999999999999999999876 4777777777777776432       46788999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|+||||||..
T Consensus        74 ~~~~~~~~~id~vi~~ag~~   93 (250)
T PRK08063         74 AQIDEEFGRLDVFVNNAASG   93 (250)
T ss_pred             HHHHHHcCCCCEEEECCCCC
Confidence            99999999999999999864

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.72  E-value=1e-16  Score=107.07  Aligned_cols=90  Identities=14%  Similarity=0.163  Sum_probs=69.9

Q ss_pred             CCCcEEEEecC--CChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           15 LNEKVVMVTGA--SSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        15 ~~~~~~lvtG~--~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      +.+|+++|||+  ++|||+++|++|+++|++|++++|.....+ ..+++....       .....+.+|++ ++++++.+
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~-~~~~~~~~~-------~~~~~~~~Dv~-d~~~v~~~   74 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKD-RITEFAAEF-------GSDLVFPCDVA-SDEQIDAL   74 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHH-HHHHHHHhc-------CCcceeeccCC-CHHHHHHH
Confidence            56899999996  689999999999999999998865422112 222222211       11246889996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.++++++|+||||||+.
T Consensus        75 ~~~~~~~~g~iD~lvnnAG~~   95 (260)
T PRK06997         75 FASLGQHWDGLDGLVHSIGFA   95 (260)
T ss_pred             HHHHHHHhCCCcEEEEccccC
Confidence            999999999999999999975

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.72  E-value=2.4e-16  Score=104.01  Aligned_cols=93  Identities=35%  Similarity=0.538  Sum_probs=81.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++++++++|||++++||.+++++|+++|++|++++|+.+......+.+...+       .++.++.+|++ +.+++..++
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dl~-~~~~~~~~~   74 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAG-------GKARARQVDVR-DRAALKAAV   74 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CeEEEEECCCC-CHHHHHHHH
Confidence            4568899999999999999999999999999999999877777777665432       35788999995 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+.++++|++|||+|...
T Consensus        75 ~~~~~~~~~~d~vi~~ag~~~   95 (251)
T PRK12826         75 AAGVEDFGRLDILVANAGIFP   95 (251)
T ss_pred             HHHHHHhCCCCEEEECCCCCC
Confidence            999999999999999998754

>PRK05855 short chain dehydrogenase; Validated

Probab=99.72  E-value=1.6e-16  Score=115.57  Aligned_cols=93  Identities=34%  Similarity=0.455  Sum_probs=82.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+++++|||+++|||++++++|+++|++|++++|+.+..++..+.++..+       .++.++.+|++ +++++..++
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~-~~~~~~~~~  383 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAG-------AVAHAYRVDVS-DADAMEAFA  383 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CeEEEEEcCCC-CHHHHHHHH
Confidence            4567899999999999999999999999999999999888888777776543       46888999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+.++++|+||||||+..
T Consensus       384 ~~~~~~~g~id~lv~~Ag~~~  404 (582)
T PRK05855        384 EWVRAEHGVPDIVVNNAGIGM  404 (582)
T ss_pred             HHHHHhcCCCcEEEECCccCC
Confidence            999999999999999999853

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.72  E-value=1e-16  Score=106.95  Aligned_cols=87  Identities=34%  Similarity=0.536  Sum_probs=74.8

Q ss_pred             CCCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHH
Q 033624           10 EPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATI   89 (115)
Q Consensus        10 ~~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~   89 (115)
                      .++..+.+++++|||+++|||++++++|+++|++|++++++.....                ..++..+.+|++ +++++
T Consensus         2 ~~~~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~----------------~~~~~~~~~D~~-~~~~~   64 (266)
T PRK06171          2 QDWLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ----------------HENYQFVPTDVS-SAEEV   64 (266)
T ss_pred             cccccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc----------------cCceEEEEccCC-CHHHH
Confidence            3445678999999999999999999999999999999988765421                125678899996 89999


Q ss_pred             HHHHHHHHHHcCCccEEEeCCccC
Q 033624           90 EISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        90 ~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      +.+++++.+.++++|++|||||+.
T Consensus        65 ~~~~~~~~~~~g~id~li~~Ag~~   88 (266)
T PRK06171         65 NHTVAEIIEKFGRIDGLVNNAGIN   88 (266)
T ss_pred             HHHHHHHHHHcCCCCEEEECCccc
Confidence            999999999999999999999974

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.72  E-value=2.9e-16  Score=103.65  Aligned_cols=89  Identities=31%  Similarity=0.454  Sum_probs=76.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+++++|||++++||..++++|+++|++|++++|+.+...+..+.+.          .++.++++|++ +.+++..++
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~-~~~~~~~~~   71 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELG----------ESALVIRADAG-DVAAQKALA   71 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhC----------CceEEEEecCC-CHHHHHHHH
Confidence            3568999999999999999999999999999999998766655554431          35778899996 888999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +.+.+.++++|++|||||..
T Consensus        72 ~~~~~~~~~id~vi~~ag~~   91 (249)
T PRK06500         72 QALAEAFGRLDAVFINAGVA   91 (249)
T ss_pred             HHHHHHhCCCCEEEECCCCC
Confidence            99999999999999999974

>PRK06484 short chain dehydrogenase; Validated

Probab=99.71  E-value=1.7e-16  Score=114.77  Aligned_cols=88  Identities=33%  Similarity=0.542  Sum_probs=77.6

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      ..+|+++|||+++|||+++|++|+++|++|++++|+.+.+++..+.+.          .++..+.+|++ ++++++.+++
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~-~~~~~~~~~~  335 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALG----------DEHLSVQADIT-DEAAVESAFA  335 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----------CceeEEEccCC-CHHHHHHHHH
Confidence            468999999999999999999999999999999999877776665442          34667899996 8999999999


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                      ++.+.++++|+||||||+.
T Consensus       336 ~~~~~~g~id~li~nAg~~  354 (520)
T PRK06484        336 QIQARWGRLDVLVNNAGIA  354 (520)
T ss_pred             HHHHHcCCCCEEEECCCCc
Confidence            9999999999999999975

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.71  E-value=2.9e-16  Score=104.35  Aligned_cols=91  Identities=31%  Similarity=0.412  Sum_probs=78.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +++++|||++++||.+++++|+++|++|++++|+.+..+...+.+....     ...++.++.+|++ +++++..+++++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~-~~~~i~~~~~~~   75 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEY-----GEGMAYGFGADAT-SEQSVLALSRGV   75 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhc-----CCceeEEEEccCC-CHHHHHHHHHHH
Confidence            6789999999999999999999999999999999887777666665321     1135789999996 899999999999


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                      .+.++++|++|||||..
T Consensus        76 ~~~~~~id~vv~~ag~~   92 (259)
T PRK12384         76 DEIFGRVDLLVYNAGIA   92 (259)
T ss_pred             HHHcCCCCEEEECCCcC
Confidence            99999999999999975

>PRK12743 oxidoreductase; Provisional

Probab=99.71  E-value=2.8e-16  Score=104.50  Aligned_cols=89  Identities=34%  Similarity=0.462  Sum_probs=76.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEec-ccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      +++++|||++++||++++++|+++|++|+++.+ +.+..+...+.++..+       .++..+.+|++ ++++++.++++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~-~~~~~~~~~~~   73 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHG-------VRAEIRQLDLS-DLPEGAQALDK   73 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC-------CceEEEEccCC-CHHHHHHHHHH
Confidence            678999999999999999999999999988765 5555666666665433       56888999995 89999999999


Q ss_pred             HHHHcCCccEEEeCCccC
Q 033624           96 AWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~  113 (115)
                      +.+.++++|++|||+|..
T Consensus        74 ~~~~~~~id~li~~ag~~   91 (256)
T PRK12743         74 LIQRLGRIDVLVNNAGAM   91 (256)
T ss_pred             HHHHcCCCCEEEECCCCC
Confidence            999999999999999974

>PRK07985 oxidoreductase; Provisional

Probab=99.71  E-value=3.2e-16  Score=106.41  Aligned_cols=92  Identities=26%  Similarity=0.391  Sum_probs=76.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc--chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV--DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .+.+++++|||+++|||++++++|+++|++|++.+|+.  +..++..+.+...+       .++.++.+|++ +++++..
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~-~~~~~~~  117 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECG-------RKAVLLPGDLS-DEKFARS  117 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcC-------CeEEEEEccCC-CHHHHHH
Confidence            46789999999999999999999999999999887653  34445544444322       45778999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++++.+.++++|++|||||..
T Consensus       118 ~~~~~~~~~g~id~lv~~Ag~~  139 (294)
T PRK07985        118 LVHEAHKALGGLDIMALVAGKQ  139 (294)
T ss_pred             HHHHHHHHhCCCCEEEECCCCC
Confidence            9999999999999999999963

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.3e-16  Score=104.61  Aligned_cols=84  Identities=35%  Similarity=0.456  Sum_probs=72.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+++++|||+++|||++++++|+++|++|++++|+.+.      .  ..       ..++.++.+|++ ++++++.++
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~------~--~~-------~~~~~~~~~D~~-~~~~~~~~~   66 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE------T--VD-------GRPAEFHAADVR-DPDQVAALV   66 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh------h--hc-------CCceEEEEccCC-CHHHHHHHH
Confidence            4679999999999999999999999999999999998654      0  11       135778999995 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +.+.+.++++|++|||||+.
T Consensus        67 ~~~~~~~~~id~vi~~ag~~   86 (252)
T PRK07856         67 DAIVERHGRLDVLVNNAGGS   86 (252)
T ss_pred             HHHHHHcCCCCEEEECCCCC
Confidence            99999999999999999974

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.71  E-value=3.4e-16  Score=103.28  Aligned_cols=91  Identities=30%  Similarity=0.477  Sum_probs=74.9

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEe-cccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAA-RRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      +.+|+++|||++++||+.++++|+++|++|++.. ++.....+..+.++..+       .++..+.+|++ +.+++..++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~~   72 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALG-------FDFIASEGNVG-DWDSTKAAF   72 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcC-------CcEEEEEcCCC-CHHHHHHHH
Confidence            3579999999999999999999999999988754 44444555555554332       46778899995 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|++|||||..
T Consensus        73 ~~~~~~~~~id~li~~ag~~   92 (246)
T PRK12938         73 DKVKAEVGEIDVLVNNAGIT   92 (246)
T ss_pred             HHHHHHhCCCCEEEECCCCC
Confidence            99999999999999999975

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.71  E-value=4.5e-16  Score=102.83  Aligned_cols=92  Identities=38%  Similarity=0.494  Sum_probs=76.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc-hHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-RLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .+.+++++|||+++|||..+++.|+++|++|++++|+.+ ..+...+.++..+       .++..+.+|++ +++++..+
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-------~~~~~~~~D~~-~~~~~~~~   74 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAG-------GRASAVGADLT-DEESVAAL   74 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcC-------CceEEEEcCCC-CHHHHHHH
Confidence            356899999999999999999999999999999988753 4455555555322       45778999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|++|||||..
T Consensus        75 ~~~~~~~~~~~d~vi~~ag~~   95 (248)
T PRK07806         75 MDTAREEFGGLDALVLNASGG   95 (248)
T ss_pred             HHHHHHhCCCCcEEEECCCCC
Confidence            999988899999999999864

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.71  E-value=3.2e-16  Score=104.92  Aligned_cols=89  Identities=31%  Similarity=0.434  Sum_probs=78.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      ++++|||+++|||+.++++|+++|++|++++|+.+..++..+.++..+       .++..+.+|++ +++++..+++.+.
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~D~~-~~~~~~~~~~~i~   72 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAG-------GDGFYQRCDVR-DYSQLTALAQACE   72 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CceEEEEccCC-CHHHHHHHHHHHH
Confidence            468999999999999999999999999999999888888777776543       46788999996 8999999999999


Q ss_pred             HHcCCccEEEeCCccCC
Q 033624           98 EAFGRVDALVNNAGIRG  114 (115)
Q Consensus        98 ~~~~~id~li~naG~~~  114 (115)
                      ..++++|+||||||+..
T Consensus        73 ~~~~~id~lI~~ag~~~   89 (270)
T PRK05650         73 EKWGGIDVIVNNAGVAS   89 (270)
T ss_pred             HHcCCCCEEEECCCCCC
Confidence            99999999999999753

>PRK06398 aldose dehydrogenase; Validated

Probab=99.71  E-value=1.7e-16  Score=105.84  Aligned_cols=81  Identities=28%  Similarity=0.477  Sum_probs=71.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+++++|||+++|||++++++|+++|++|++++|+....                  .++.++.+|++ ++++++.++
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~------------------~~~~~~~~D~~-~~~~i~~~~   63 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY------------------NDVDYFKVDVS-NKEQVIKGI   63 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc------------------CceEEEEccCC-CHHHHHHHH
Confidence            46799999999999999999999999999999999875321                  24678899996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|+||||||+.
T Consensus        64 ~~~~~~~~~id~li~~Ag~~   83 (258)
T PRK06398         64 DYVISKYGRIDILVNNAGIE   83 (258)
T ss_pred             HHHHHHcCCCCEEEECCCCC
Confidence            99999999999999999974

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.71  E-value=5e-16  Score=105.29  Aligned_cols=93  Identities=31%  Similarity=0.459  Sum_probs=78.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc-hHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-RLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ..+++++++|||++++||.+++++|+++|++|++++|+.+ ..+...+.++..+       .++.++.+|++ +.+.++.
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~-~~~~~~~  113 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEG-------VKCLLIPGDVS-DEAFCKD  113 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcC-------CeEEEEEccCC-CHHHHHH
Confidence            4567899999999999999999999999999999998754 3444445554322       46788999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++++.+.++++|++|||||..
T Consensus       114 ~~~~i~~~~~~iD~lI~~Ag~~  135 (290)
T PRK06701        114 AVEETVRELGRLDILVNNAAFQ  135 (290)
T ss_pred             HHHHHHHHcCCCCEEEECCccc
Confidence            9999999999999999999974

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.71  E-value=4.8e-16  Score=102.65  Aligned_cols=91  Identities=30%  Similarity=0.515  Sum_probs=79.8

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +.+++++|||++++||..+++.|+++|++|++++|+.+..+...+.+...+       .++..+.+|++ +.++++.+++
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~~~   74 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALG-------TEVRGYAANVT-DEEDVEATFA   74 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CceEEEEcCCC-CHHHHHHHHH
Confidence            568999999999999999999999999999999999887777777765432       46788999996 8899999999


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                      .+.+.++++|++|||||..
T Consensus        75 ~~~~~~~~id~vi~~ag~~   93 (253)
T PRK08217         75 QIAEDFGQLNGLINNAGIL   93 (253)
T ss_pred             HHHHHcCCCCEEEECCCcc
Confidence            9888889999999999964

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.71  E-value=4.1e-16  Score=102.94  Aligned_cols=91  Identities=31%  Similarity=0.507  Sum_probs=79.6

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +++++++|||++++||..++++|+++|++|++++|+.+..+++.+.++..+       .++.++.+|++ +.++++.+++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~d~~-~~~~~~~~~~   72 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKG-------GNAQAFACDIT-DRDSVDTAVA   72 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-------CcEEEEEcCCC-CHHHHHHHHH
Confidence            358899999999999999999999999999999999887777766665432       46888999996 8999999999


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                      .+.+.++++|++|||+|..
T Consensus        73 ~~~~~~~~~d~vi~~ag~~   91 (250)
T TIGR03206        73 AAEQALGPVDVLVNNAGWD   91 (250)
T ss_pred             HHHHHcCCCCEEEECCCCC
Confidence            9999999999999999864

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.71  E-value=4.4e-16  Score=103.63  Aligned_cols=93  Identities=34%  Similarity=0.488  Sum_probs=75.2

Q ss_pred             CCCCCcEEEEecCC--ChHHHHHHHHHHHhCCeEEEEecc-----------cchHHHHHHHhhCCCCCCCCCccceEEEE
Q 033624           13 HDLNEKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARR-----------VDRLKSLCDEINKPGMVGSPDSVRAVAVE   79 (115)
Q Consensus        13 ~~~~~~~~lvtG~~--~giG~~~a~~l~~~g~~v~~~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (115)
                      ..+++|+++|||++  +|||+++|++|+++|++|++++++           .+...+..+.++..+       .++..+.
T Consensus         2 ~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-------~~~~~~~   74 (256)
T PRK12859          2 NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNG-------VKVSSME   74 (256)
T ss_pred             CCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcC-------CeEEEEE
Confidence            35789999999998  499999999999999999887542           122233444454332       5788999


Q ss_pred             eecCCCHHHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           80 LDVCADGATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        80 ~di~~~~~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      +|++ ++++++.+++++.+.++++|++|||||..
T Consensus        75 ~D~~-~~~~i~~~~~~~~~~~g~id~li~~ag~~  107 (256)
T PRK12859         75 LDLT-QNDAPKELLNKVTEQLGYPHILVNNAAYS  107 (256)
T ss_pred             cCCC-CHHHHHHHHHHHHHHcCCCcEEEECCCCC
Confidence            9995 89999999999999999999999999975

>PRK06484 short chain dehydrogenase; Validated

Probab=99.71  E-value=2.9e-16  Score=113.50  Aligned_cols=88  Identities=40%  Similarity=0.670  Sum_probs=77.7

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      ..+++++|||+++|||++++++|+++|++|++++|+.+.+++..+++.          .++.++.+|++ ++++++.+++
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~-~~~~~~~~~~   71 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLG----------PDHHALAMDVS-DEAQIREGFE   71 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----------CceeEEEeccC-CHHHHHHHHH
Confidence            468999999999999999999999999999999999887776665542          35678999996 8999999999


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                      ++.+.++++|+||||||+.
T Consensus        72 ~~~~~~g~iD~li~nag~~   90 (520)
T PRK06484         72 QLHREFGRIDVLVNNAGVT   90 (520)
T ss_pred             HHHHHhCCCCEEEECCCcC
Confidence            9999999999999999973

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.71  E-value=5.7e-16  Score=102.26  Aligned_cols=92  Identities=37%  Similarity=0.567  Sum_probs=77.0

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEec-ccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      +.+++++|||++++||..++++|+++|++|++..+ +.+..++..+.++..+       .++.++.+|++ +++++..++
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~D~~-~~~~~~~~~   75 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEG-------HDVYAVQADVS-KVEDANRLV   75 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcC-------CeEEEEECCCC-CHHHHHHHH
Confidence            56899999999999999999999999999987654 4555555656665432       46889999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+.++++|++|||||...
T Consensus        76 ~~~~~~~~~id~vi~~ag~~~   96 (247)
T PRK12935         76 EEAVNHFGKVDILVNNAGITR   96 (247)
T ss_pred             HHHHHHcCCCCEEEECCCCCC
Confidence            999999999999999999753

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.71  E-value=6.1e-16  Score=103.90  Aligned_cols=92  Identities=38%  Similarity=0.562  Sum_probs=79.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+..++++|||++++||++++++|+++|++|++++|+.+..++..+.+...+       .++.++.+|++ +++++..++
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~-~~~~~~~~~   78 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADG-------GEAVAFPLDVT-DPDSVKSFV   78 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CeEEEEECCCC-CHHHHHHHH
Confidence            4567899999999999999999999999999999998777666666555432       46778899996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|++|||||..
T Consensus        79 ~~~~~~~~~id~vi~~Ag~~   98 (274)
T PRK07775         79 AQAEEALGEIEVLVSGAGDT   98 (274)
T ss_pred             HHHHHhcCCCCEEEECCCcC
Confidence            99988889999999999974

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.70  E-value=4.1e-16  Score=103.82  Aligned_cols=91  Identities=22%  Similarity=0.370  Sum_probs=76.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhC-CeEEEEecccch-HHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDR-LKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+++++|||+++|||+++|++|+++| ++|++++|+.+. .+...++++..+      ..++.++.+|++ +.+++..++
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~------~~~v~~~~~D~~-~~~~~~~~~   79 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAG------ASSVEVIDFDAL-DTDSHPKVI   79 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcC------CCceEEEEecCC-ChHHHHHHH
Confidence            36899999999999999999999985 899999999886 777777776532      236888999996 888899888


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+ ++++|++|||+|+..
T Consensus        80 ~~~~~-~g~id~li~~ag~~~   99 (253)
T PRK07904         80 DAAFA-GGDVDVAIVAFGLLG   99 (253)
T ss_pred             HHHHh-cCCCCEEEEeeecCC
Confidence            88876 589999999999853

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.70  E-value=5.3e-16  Score=103.12  Aligned_cols=92  Identities=37%  Similarity=0.547  Sum_probs=79.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCe-EEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .+++++++|||++++||..++++|+++|++ |++++|+.+......+.+...+       .++.++.+|++ +++++..+
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~D~~-~~~~~~~~   74 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALG-------AKAVFVQADLS-DVEDCRRV   74 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcC-------CeEEEEEccCC-CHHHHHHH
Confidence            467899999999999999999999999999 9999998777766666664332       46778899996 88999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++.+.+.++++|++|||+|..
T Consensus        75 ~~~~~~~~g~id~li~~ag~~   95 (260)
T PRK06198         75 VAAADEAFGRLDALVNAAGLT   95 (260)
T ss_pred             HHHHHHHhCCCCEEEECCCcC
Confidence            999988899999999999975

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.70  E-value=5.8e-16  Score=101.91  Aligned_cols=89  Identities=35%  Similarity=0.469  Sum_probs=76.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++++++++|||++++||+.++++|+++|+.|++.+|+.+..+.....+.          .++.++.+|++ +.++++.++
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~----------~~~~~~~~D~~-~~~~~~~~~   71 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELG----------ERVKIFPANLS-DRDEVKALG   71 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC----------CceEEEEccCC-CHHHHHHHH
Confidence            4568999999999999999999999999999988888777665554431          35678899996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|++|||||..
T Consensus        72 ~~~~~~~~~id~vi~~ag~~   91 (245)
T PRK12936         72 QKAEADLEGVDILVNNAGIT   91 (245)
T ss_pred             HHHHHHcCCCCEEEECCCCC
Confidence            99999999999999999975

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.70  E-value=7.3e-16  Score=102.17  Aligned_cols=90  Identities=34%  Similarity=0.517  Sum_probs=75.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      +++.+++++|||++++||..++++|+++|++|++++|+.... .....+.         ..++..+.+|++ ++++++.+
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~---------~~~~~~~~~Dl~-~~~~~~~~   79 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLL---------GGNAKGLVCDVS-DSQSVEAA   79 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhh---------CCceEEEEecCC-CHHHHHHH
Confidence            457899999999999999999999999999999999986532 2233332         134668999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|++|||||+.
T Consensus        80 ~~~~~~~~~~~d~vi~~ag~~  100 (255)
T PRK06841         80 VAAVISAFGRIDILVNSAGVA  100 (255)
T ss_pred             HHHHHHHhCCCCEEEECCCCC
Confidence            999999999999999999974

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.70  E-value=5.9e-16  Score=101.94  Aligned_cols=92  Identities=40%  Similarity=0.558  Sum_probs=77.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc-chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ++++++++|||++++||+.+++.|+++|++|+++.++. +..+...+.+...+       .++.++.+|++ +.+++.++
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~-~~~~~~~~   73 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAG-------GRAIAVQADVA-DAAAVTRL   73 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcC-------CeEEEEECCCC-CHHHHHHH
Confidence            45689999999999999999999999999998877654 33455555555432       46888999995 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|++|||||+.
T Consensus        74 ~~~~~~~~~~id~vi~~ag~~   94 (245)
T PRK12937         74 FDAAETAFGRIDVLVNNAGVM   94 (245)
T ss_pred             HHHHHHHcCCCCEEEECCCCC
Confidence            999999999999999999975

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.70  E-value=1.6e-16  Score=99.35  Aligned_cols=90  Identities=32%  Similarity=0.421  Sum_probs=81.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      +.+|.+++|||+.+|+|++.+++|+.+|++|++.+...++..+..+++          +.++.+...|++ .+.+++..+
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel----------g~~~vf~padvt-sekdv~aal   74 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL----------GGKVVFTPADVT-SEKDVRAAL   74 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh----------CCceEEeccccC-cHHHHHHHH
Confidence            346889999999999999999999999999999999988888888877          367899999997 799999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      ..++.+||++|.++||||+..
T Consensus        75 a~ak~kfgrld~~vncagia~   95 (260)
T KOG1199|consen   75 AKAKAKFGRLDALVNCAGIAY   95 (260)
T ss_pred             HHHHhhccceeeeeeccceee
Confidence            999999999999999999853

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.70  E-value=4e-16  Score=115.42  Aligned_cols=93  Identities=40%  Similarity=0.546  Sum_probs=82.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+.+++++|||+++|||++++++|+++|++|++++|+.+.+++..+.+...+       .++.++.+|++ +.++++.+
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~-~~~~~~~~  438 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKG-------GTAHAYTCDLT-DSAAVDHT  438 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------CcEEEEEecCC-CHHHHHHH
Confidence            35678999999999999999999999999999999999988888777776433       46888999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|++|||||+.
T Consensus       439 ~~~~~~~~g~id~li~~Ag~~  459 (657)
T PRK07201        439 VKDILAEHGHVDYLVNNAGRS  459 (657)
T ss_pred             HHHHHHhcCCCCEEEECCCCC
Confidence            999999999999999999974

>PRK06182 short chain dehydrogenase; Validated

Probab=99.70  E-value=4.3e-16  Score=104.45  Aligned_cols=84  Identities=43%  Similarity=0.633  Sum_probs=72.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .+++++|||+++|||++++++|+++|++|++++|+.+.+++...             ..+.++.+|++ ++++++.++++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~-------------~~~~~~~~Dv~-~~~~~~~~~~~   67 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS-------------LGVHPLSLDVT-DEASIKAAVDT   67 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-------------CCCeEEEeeCC-CHHHHHHHHHH
Confidence            47899999999999999999999999999999998776544321             13667889996 89999999999


Q ss_pred             HHHHcCCccEEEeCCccC
Q 033624           96 AWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~  113 (115)
                      +.+.++++|+||||||+.
T Consensus        68 ~~~~~~~id~li~~ag~~   85 (273)
T PRK06182         68 IIAEEGRIDVLVNNAGYG   85 (273)
T ss_pred             HHHhcCCCCEEEECCCcC
Confidence            999999999999999975

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.70  E-value=6.1e-16  Score=103.15  Aligned_cols=89  Identities=34%  Similarity=0.539  Sum_probs=77.0

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +++++++|||++++||..++++|+++|++|++++|+.+..++..+++..        +.++.++.+|++ +++++..+++
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~D~~-d~~~~~~~~~   73 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPY--------PGRHRWVVADLT-SEAGREAVLA   73 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhc--------CCceEEEEccCC-CHHHHHHHHH
Confidence            5688999999999999999999999999999999998877777666621        246788999996 8999999988


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                      .+.+ ++++|++|||||..
T Consensus        74 ~~~~-~~~id~lv~~ag~~   91 (263)
T PRK09072         74 RARE-MGGINVLINNAGVN   91 (263)
T ss_pred             HHHh-cCCCCEEEECCCCC
Confidence            8765 78999999999974

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.70  E-value=4.9e-16  Score=104.56  Aligned_cols=86  Identities=26%  Similarity=0.484  Sum_probs=73.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +|+++|||+ +|||++++++|+ +|++|++++|+.+..++..++++..+       .++.++.+|++ +++++..+++++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dv~-d~~~i~~~~~~~   71 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAG-------FDVSTQEVDVS-SRESVKALAATA   71 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcC-------CeEEEEEeecC-CHHHHHHHHHHH
Confidence            678999998 699999999996 79999999999877777776665432       46788999996 899999999887


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                       ++++++|+||||||+.
T Consensus        72 -~~~g~id~li~nAG~~   87 (275)
T PRK06940         72 -QTLGPVTGLVHTAGVS   87 (275)
T ss_pred             -HhcCCCCEEEECCCcC
Confidence             5689999999999975

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.70  E-value=5.1e-16  Score=115.47  Aligned_cols=96  Identities=35%  Similarity=0.510  Sum_probs=81.7

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ...+.+|+++|||+++|||++++++|+++|++|++++|+.+..+...+.+....     ...++..+.+|++ ++++++.
T Consensus       409 ~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~-----~~~~~~~v~~Dvt-d~~~v~~  482 (676)
T TIGR02632       409 EKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQF-----GAGRAVALKMDVT-DEQAVKA  482 (676)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhc-----CCCcEEEEECCCC-CHHHHHH
Confidence            345779999999999999999999999999999999999887776666665321     1135678999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++++.+.++++|++|||||+.
T Consensus       483 a~~~i~~~~g~iDilV~nAG~~  504 (676)
T TIGR02632       483 AFADVALAYGGVDIVVNNAGIA  504 (676)
T ss_pred             HHHHHHHhcCCCcEEEECCCCC
Confidence            9999999999999999999975

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.70  E-value=5.5e-16  Score=104.13  Aligned_cols=92  Identities=36%  Similarity=0.495  Sum_probs=77.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .+++++|||++++||..+++.|+++|++|++++|+.+..+...+.+....     ...++.++.+|++ ++++++. +++
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~-d~~~~~~-~~~   74 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLN-----LQQNIKVQQLDVT-DQNSIHN-FQL   74 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcC-----CCCceeEEecCCC-CHHHHHH-HHH
Confidence            47899999999999999999999999999999999887777666554322     1246888999996 8999999 888


Q ss_pred             HHHHcCCccEEEeCCccCC
Q 033624           96 AWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~~  114 (115)
                      +.+.++++|++|||||...
T Consensus        75 ~~~~~~~id~vv~~ag~~~   93 (280)
T PRK06914         75 VLKEIGRIDLLVNNAGYAN   93 (280)
T ss_pred             HHHhcCCeeEEEECCcccc
Confidence            8888999999999999753

>TIGR02415 23BDH acetoin reductases

Probab=99.70  E-value=6e-16  Score=102.47  Aligned_cols=88  Identities=39%  Similarity=0.578  Sum_probs=77.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      |+++|||++++||..++++|++.|++|++++|+.+..++..+.+...+       .++.++.+|++ +++++..+++.+.
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dl~-~~~~i~~~~~~~~   72 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAG-------GKAVAYKLDVS-DKDQVFSAIDQAA   72 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CeEEEEEcCCC-CHHHHHHHHHHHH
Confidence            579999999999999999999999999999999877777777766432       46888999996 8999999999999


Q ss_pred             HHcCCccEEEeCCccC
Q 033624           98 EAFGRVDALVNNAGIR  113 (115)
Q Consensus        98 ~~~~~id~li~naG~~  113 (115)
                      +.++++|++|||||+.
T Consensus        73 ~~~~~id~vi~~ag~~   88 (254)
T TIGR02415        73 EKFGGFDVMVNNAGVA   88 (254)
T ss_pred             HHcCCCCEEEECCCcC
Confidence            9999999999999975

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.70  E-value=7.2e-16  Score=102.16  Aligned_cols=92  Identities=33%  Similarity=0.481  Sum_probs=76.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEE-ecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ++.+++++|||++++||..++++|+++|++|++. .|+.+..+...+.+...+       .++.++.+|++ +++++..+
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-d~~~i~~~   74 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNG-------GKAFLIEADLN-SIDGVKKL   74 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-------CcEEEEEcCcC-CHHHHHHH
Confidence            4568999999999999999999999999998775 677766666666654322       45788999996 89999999


Q ss_pred             HHHHHHHc------CCccEEEeCCccC
Q 033624           93 VQKAWEAF------GRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~------~~id~li~naG~~  113 (115)
                      ++++.+.+      +++|++|||||..
T Consensus        75 ~~~~~~~~~~~~~~~~id~vi~~ag~~  101 (254)
T PRK12746         75 VEQLKNELQIRVGTSEIDILVNNAGIG  101 (254)
T ss_pred             HHHHHHHhccccCCCCccEEEECCCCC
Confidence            99988876      4799999999975

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.70  E-value=2.9e-16  Score=104.40  Aligned_cols=86  Identities=27%  Similarity=0.336  Sum_probs=73.7

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      +..++.+++++|||+++|||.++++.|+++|++|++++|+.+..      .          ..++.++.+|++ ++++++
T Consensus         3 ~~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~------~----------~~~~~~~~~D~~-~~~~~~   65 (260)
T PRK06523          3 FFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD------L----------PEGVEFVAADLT-TAEGCA   65 (260)
T ss_pred             cCcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh------c----------CCceeEEecCCC-CHHHHH
Confidence            33467899999999999999999999999999999999875421      1          135778999996 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .+++++.+.++++|++|||||+.
T Consensus        66 ~~~~~~~~~~~~id~vi~~ag~~   88 (260)
T PRK06523         66 AVARAVLERLGGVDILVHVLGGS   88 (260)
T ss_pred             HHHHHHHHHcCCCCEEEECCccc
Confidence            99999999999999999999963

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.70  E-value=7.1e-16  Score=101.80  Aligned_cols=90  Identities=36%  Similarity=0.468  Sum_probs=74.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEec-ccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      +++++|||++++||..++++|+++|++|++..+ +++..+.....++..+       .++.++.+|++ +.+++..++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~Dl~-~~~~~~~~~~~   73 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQG-------GEALAVAADVA-DEADVLRLFEA   73 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCC-------CcEEEEEeccC-CHHHHHHHHHH
Confidence            578999999999999999999999999888764 4455555555565432       35778999996 89999999999


Q ss_pred             HHHHcCCccEEEeCCccCC
Q 033624           96 AWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~~  114 (115)
                      +.+.++++|++|||||...
T Consensus        74 ~~~~~~~id~li~~ag~~~   92 (248)
T PRK06123         74 VDRELGRLDALVNNAGILE   92 (248)
T ss_pred             HHHHhCCCCEEEECCCCCC
Confidence            9999999999999999753

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.70  E-value=9e-16  Score=102.92  Aligned_cols=93  Identities=26%  Similarity=0.383  Sum_probs=79.3

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +.+++++|||++++||..++++|+++|++|++++|+.+..+...+.+....     ...++.++.+|++ +++++..+++
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~~Dl~-~~~~~~~~~~   78 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALK-----GAGAVRYEPADVT-DEDQVARAVD   78 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcc-----CCCceEEEEcCCC-CHHHHHHHHH
Confidence            568999999999999999999999999999999999877766666665321     1246788899996 8899999999


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                      ++.+.++++|++|||||..
T Consensus        79 ~~~~~~~~~d~li~~ag~~   97 (276)
T PRK05875         79 AATAWHGRLHGVVHCAGGS   97 (276)
T ss_pred             HHHHHcCCCCEEEECCCcc
Confidence            9999999999999999964

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.69  E-value=6.3e-16  Score=101.75  Aligned_cols=95  Identities=31%  Similarity=0.488  Sum_probs=78.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCC-CHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCA-DGATIEI   91 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~-~~~~~~~   91 (115)
                      ..+.+++++|||++++||+.+++.|+++|++|++++|+.+..+...+++...+      ...+..+.+|+++ +.+++..
T Consensus         2 ~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~~D~~~~~~~~~~~   75 (239)
T PRK08703          2 ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAG------HPEPFAIRFDLMSAEEKEFEQ   75 (239)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcC------CCCcceEEeeecccchHHHHH
Confidence            34678999999999999999999999999999999999988877777775432      1245678899863 2567888


Q ss_pred             HHHHHHHHc-CCccEEEeCCccC
Q 033624           92 SVQKAWEAF-GRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~-~~id~li~naG~~  113 (115)
                      +++++.+.+ +++|++|||||..
T Consensus        76 ~~~~i~~~~~~~id~vi~~ag~~   98 (239)
T PRK08703         76 FAATIAEATQGKLDGIVHCAGYF   98 (239)
T ss_pred             HHHHHHHHhCCCCCEEEEecccc
Confidence            888888887 7899999999974

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.69  E-value=3.5e-16  Score=106.72  Aligned_cols=99  Identities=21%  Similarity=0.264  Sum_probs=74.5

Q ss_pred             CCCCcEEEEecC--CChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCC----CCCC--ccceEEEEeec--C
Q 033624           14 DLNEKVVMVTGA--SSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMV----GSPD--SVRAVAVELDV--C   83 (115)
Q Consensus        14 ~~~~~~~lvtG~--~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~di--~   83 (115)
                      +++||+++|||+  ++|||+++|+.|++.|++|++ +|+.+.++.....++.....    ....  ......+.+|+  +
T Consensus         6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   84 (303)
T PLN02730          6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFD   84 (303)
T ss_pred             CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecC
Confidence            478999999999  799999999999999999998 78877777776666431100    0000  01135677887  2


Q ss_pred             C-----------------CHHHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           84 A-----------------DGATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        84 ~-----------------~~~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .                 ++++++.+++++.+.++++|+||||||+.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~  131 (303)
T PLN02730         85 TPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANG  131 (303)
T ss_pred             ccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCcc
Confidence            1                 23489999999999999999999999753

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.69  E-value=6e-16  Score=104.04  Aligned_cols=87  Identities=37%  Similarity=0.444  Sum_probs=74.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .+++++|||+++|||++++++|+++|++|++++|+.+..+.+.+..          ..++..+.+|++ +++++..+++.
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~----------~~~~~~~~~D~~-d~~~~~~~~~~   71 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALH----------PDRALARLLDVT-DFDAIDAVVAD   71 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhc----------CCCeeEEEccCC-CHHHHHHHHHH
Confidence            4789999999999999999999999999999999887655443321          135778899996 89999999999


Q ss_pred             HHHHcCCccEEEeCCccC
Q 033624           96 AWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~  113 (115)
                      +.+.++++|++|||||+.
T Consensus        72 ~~~~~~~~d~vv~~ag~~   89 (277)
T PRK06180         72 AEATFGPIDVLVNNAGYG   89 (277)
T ss_pred             HHHHhCCCCEEEECCCcc
Confidence            999999999999999975

>PLN00015 protochlorophyllide reductase

Probab=99.69  E-value=3.9e-16  Score=106.54  Aligned_cols=85  Identities=27%  Similarity=0.331  Sum_probs=73.8

Q ss_pred             EEecCCChHHHHHHHHHHHhC-CeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHHH
Q 033624           21 MVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEA   99 (115)
Q Consensus        21 lvtG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~~   99 (115)
                      +|||+++|||++++++|+++| ++|++++|+.+..++..+++...       ..++.++.+|++ +.++++.+++++.+.
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dl~-d~~~v~~~~~~~~~~   72 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP-------KDSYTVMHLDLA-SLDSVRQFVDNFRRS   72 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC-------CCeEEEEEecCC-CHHHHHHHHHHHHhc
Confidence            589999999999999999999 99999999988777777666432       246778899996 899999999999888


Q ss_pred             cCCccEEEeCCccC
Q 033624          100 FGRVDALVNNAGIR  113 (115)
Q Consensus       100 ~~~id~li~naG~~  113 (115)
                      ++++|+||||||+.
T Consensus        73 ~~~iD~lInnAG~~   86 (308)
T PLN00015         73 GRPLDVLVCNAAVY   86 (308)
T ss_pred             CCCCCEEEECCCcC
Confidence            89999999999985

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.69  E-value=7.8e-16  Score=102.34  Aligned_cols=92  Identities=30%  Similarity=0.440  Sum_probs=74.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc----chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV----DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATI   89 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~   89 (115)
                      .+.+++++|||+++|||.++++.|+++|++|+++.++.    +..++..+.++..+       .++.++++|++ +++++
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~D~~-~~~~~   76 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAG-------AKAVAFQADLT-TAAAV   76 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhC-------CcEEEEecCcC-CHHHH
Confidence            45689999999999999999999999999977766543    33444445554322       46788999996 89999


Q ss_pred             HHHHHHHHHHcCCccEEEeCCccC
Q 033624           90 EISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        90 ~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      +.+++++.+.++++|++|||||+.
T Consensus        77 ~~~~~~~~~~~~~id~li~~ag~~  100 (257)
T PRK12744         77 EKLFDDAKAAFGRPDIAINTVGKV  100 (257)
T ss_pred             HHHHHHHHHhhCCCCEEEECCccc
Confidence            999999999999999999999974

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.69  E-value=9.9e-16  Score=101.79  Aligned_cols=92  Identities=30%  Similarity=0.381  Sum_probs=74.4

Q ss_pred             CCCCcEEEEecCCC--hHHHHHHHHHHHhCCeEEEEeccc-----------chHHHHHHHhhCCCCCCCCCccceEEEEe
Q 033624           14 DLNEKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRV-----------DRLKSLCDEINKPGMVGSPDSVRAVAVEL   80 (115)
Q Consensus        14 ~~~~~~~lvtG~~~--giG~~~a~~l~~~g~~v~~~~r~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (115)
                      .+++++++|||+++  |||..++++|+++|++|++++|++           .......+.+...+       .++.++.+
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~   74 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYG-------VRCEHMEI   74 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcC-------CeEEEEEC
Confidence            35689999999984  899999999999999999999872           11122334443322       46889999


Q ss_pred             ecCCCHHHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           81 DVCADGATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        81 di~~~~~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      |++ +++++..+++++.+.++++|++|||||+.
T Consensus        75 D~~-~~~~~~~~~~~~~~~~g~id~vi~~ag~~  106 (256)
T PRK12748         75 DLS-QPYAPNRVFYAVSERLGDPSILINNAAYS  106 (256)
T ss_pred             CCC-CHHHHHHHHHHHHHhCCCCCEEEECCCcC
Confidence            996 89999999999999999999999999975

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.69  E-value=1.4e-15  Score=99.87  Aligned_cols=92  Identities=39%  Similarity=0.590  Sum_probs=79.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+++++|||++++||..+++.|+++|++|++++|+++..+.....++..+       .++.++.+|++ +++++..++
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~~   73 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAG-------GEARVLVFDVS-DEAAVRALI   73 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-------CceEEEEccCC-CHHHHHHHH
Confidence            3457899999999999999999999999999999999887777777665432       56888899996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++...++++|++|||+|..
T Consensus        74 ~~~~~~~~~id~vi~~ag~~   93 (246)
T PRK05653         74 EAAVEAFGALDILVNNAGIT   93 (246)
T ss_pred             HHHHHHhCCCCEEEECCCcC
Confidence            99888889999999999875

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.69  E-value=1e-15  Score=101.90  Aligned_cols=87  Identities=37%  Similarity=0.444  Sum_probs=75.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      ++++|||++++||++++++|+++|++|++++|+.+..+++.+.+.         +.++.++.+|++ +.+++..+++.+.
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~~D~~-~~~~v~~~~~~~~   71 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG---------AGNAWTGALDVT-DRAAWDAALADFA   71 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc---------CCceEEEEecCC-CHHHHHHHHHHHH
Confidence            679999999999999999999999999999999887777666543         146889999995 8899999998877


Q ss_pred             HH-cCCccEEEeCCccCC
Q 033624           98 EA-FGRVDALVNNAGIRG  114 (115)
Q Consensus        98 ~~-~~~id~li~naG~~~  114 (115)
                      +. ++++|+||||||+..
T Consensus        72 ~~~~~~id~vi~~ag~~~   89 (260)
T PRK08267         72 AATGGRLDVLFNNAGILR   89 (260)
T ss_pred             HHcCCCCCEEEECCCCCC
Confidence            76 789999999999753

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.68  E-value=9.7e-16  Score=102.74  Aligned_cols=89  Identities=30%  Similarity=0.424  Sum_probs=75.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      ++++|||+++|||++++++|+++|++|++++|+.+..++..+++...+      ......+.+|++ ++++++.+++++.
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~D~~-~~~~~~~~~~~~~   73 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALG------GTVPEHRALDIS-DYDAVAAFAADIH   73 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CCcceEEEeeCC-CHHHHHHHHHHHH
Confidence            479999999999999999999999999999999887777777765432      123456789995 8999999999999


Q ss_pred             HHcCCccEEEeCCccC
Q 033624           98 EAFGRVDALVNNAGIR  113 (115)
Q Consensus        98 ~~~~~id~li~naG~~  113 (115)
                      ..++++|++|||+|+.
T Consensus        74 ~~~~~id~lv~~ag~~   89 (272)
T PRK07832         74 AAHGSMDVVMNIAGIS   89 (272)
T ss_pred             HhcCCCCEEEECCCCC
Confidence            9999999999999974

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.68  E-value=1e-15  Score=100.61  Aligned_cols=84  Identities=18%  Similarity=0.245  Sum_probs=71.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +++++|||+++|||++++++|+++|++|++++|+.+...   +.++..         .+.++.+|++ ++++++.+++++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~---------~~~~~~~D~~-~~~~~~~~~~~~   68 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQA---------GAQCIQADFS-TNAGIMAFIDEL   68 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHc---------CCEEEEcCCC-CHHHHHHHHHHH
Confidence            678999999999999999999999999999999876432   233221         2467899996 899999999999


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                      .+.++++|++|||||+.
T Consensus        69 ~~~~~~id~lv~~ag~~   85 (236)
T PRK06483         69 KQHTDGLRAIIHNASDW   85 (236)
T ss_pred             HhhCCCccEEEECCccc
Confidence            99999999999999974

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.68  E-value=1.4e-15  Score=100.47  Aligned_cols=89  Identities=38%  Similarity=0.501  Sum_probs=74.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEe-cccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAA-RRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .++++|||+++|||..+++.|+++|++|+++. |+.+..+...+.++..+       .++.++.+|++ ++++++.++++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~-~~~~~~~~~~~   73 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAG-------GRACVVAGDVA-NEADVIAMFDA   73 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-------CcEEEEEeccC-CHHHHHHHHHH
Confidence            46899999999999999999999999988765 55566666666665432       46889999996 89999999999


Q ss_pred             HHHHcCCccEEEeCCccC
Q 033624           96 AWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~  113 (115)
                      +.+.++++|++|||||+.
T Consensus        74 ~~~~~~~id~li~~ag~~   91 (248)
T PRK06947         74 VQSAFGRLDALVNNAGIV   91 (248)
T ss_pred             HHHhcCCCCEEEECCccC
Confidence            988899999999999975

>PRK09135 pteridine reductase; Provisional

Probab=99.68  E-value=1.8e-15  Score=99.72  Aligned_cols=92  Identities=32%  Similarity=0.404  Sum_probs=75.5

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc-chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      +++++++|||++++||+.++++|+++|++|++++|+. ...+...+.+....      ...+.++.+|++ +.+++..++
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~~Dl~-~~~~~~~~~   76 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALR------PGSAAALQADLL-DPDALPELV   76 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc------CCceEEEEcCCC-CHHHHHHHH
Confidence            4578999999999999999999999999999999864 33444444444321      135778899996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|++|||||..
T Consensus        77 ~~~~~~~~~~d~vi~~ag~~   96 (249)
T PRK09135         77 AACVAAFGRLDALVNNASSF   96 (249)
T ss_pred             HHHHHHcCCCCEEEECCCCC
Confidence            99999999999999999974

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.3e-15  Score=101.39  Aligned_cols=90  Identities=46%  Similarity=0.656  Sum_probs=78.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +++++|||++++||..+++.|+++|++|++++|+....+...+.+...+       .++..+.+|++ +++.+..+++++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dl~-~~~~~~~~~~~~   72 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHG-------GEALVVPTDVS-DAEACERLIEAA   72 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEEccCC-CHHHHHHHHHHH
Confidence            4689999999999999999999999999999999877777776665432       46788899996 899999999999


Q ss_pred             HHHcCCccEEEeCCccCC
Q 033624           97 WEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        97 ~~~~~~id~li~naG~~~  114 (115)
                      .+.++++|++|||||...
T Consensus        73 ~~~~~~id~vi~~ag~~~   90 (263)
T PRK06181         73 VARFGGIDILVNNAGITM   90 (263)
T ss_pred             HHHcCCCCEEEECCCccc
Confidence            999999999999998743

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.68  E-value=1.4e-15  Score=100.08  Aligned_cols=92  Identities=42%  Similarity=0.599  Sum_probs=79.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEE-ecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ++++++++|||++++||..+++.|+++|++|+++ +|+.+......+.+...+       .++.++.+|++ +++++..+
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~   73 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEG-------GDAIAVKADVS-SEEDVENL   73 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-------CeEEEEECCCC-CHHHHHHH
Confidence            3568899999999999999999999999999998 888877777666665422       46788999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++.+...++++|++|+|+|..
T Consensus        74 ~~~~~~~~~~id~vi~~ag~~   94 (247)
T PRK05565         74 VEQIVEKFGKIDILVNNAGIS   94 (247)
T ss_pred             HHHHHHHhCCCCEEEECCCcC
Confidence            999988899999999999975

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.68  E-value=1.7e-15  Score=100.45  Aligned_cols=89  Identities=34%  Similarity=0.485  Sum_probs=74.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc-chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .++++|||++++||..++++|+++|++|++++|+. +...+..+.++...       .++.++.+|++ +++++..++++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~~~~   73 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALG-------VEVIFFPADVA-DLSAHEAMLDA   73 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcC-------CceEEEEecCC-CHHHHHHHHHH
Confidence            47899999999999999999999999999999864 34444555554322       46888999996 89999999999


Q ss_pred             HHHHcCCccEEEeCCccC
Q 033624           96 AWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~  113 (115)
                      +.+.++++|++|||||+.
T Consensus        74 ~~~~~~~id~vi~~ag~~   91 (256)
T PRK12745         74 AQAAWGRIDCLVNNAGVG   91 (256)
T ss_pred             HHHhcCCCCEEEECCccC
Confidence            999999999999999974

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.5e-15  Score=100.93  Aligned_cols=87  Identities=32%  Similarity=0.462  Sum_probs=74.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+++++++|||++++||.+++++|+++|++|++++|+....+...+.+.            ..++.+|++ ++++++.++
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~------------~~~~~~D~~-~~~~~~~~~   70 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG------------GLFVPTDVT-DEDAVNALF   70 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC------------CcEEEeeCC-CHHHHHHHH
Confidence            3678999999999999999999999999999999998776655444431            146789995 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|++|||||..
T Consensus        71 ~~~~~~~~~id~vi~~ag~~   90 (255)
T PRK06057         71 DTAAETYGSVDIAFNNAGIS   90 (255)
T ss_pred             HHHHHHcCCCCEEEECCCcC
Confidence            99988899999999999974

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.5e-15  Score=100.67  Aligned_cols=91  Identities=31%  Similarity=0.403  Sum_probs=72.7

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEe-cccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAA-RRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      +.+|+++|||+++|||.+++++|++.|++|++.. ++.+..++...++...+       .++..+.+|++ +.+++..++
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~~   73 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNG-------GSAFSIGANLE-SLHGVEALY   73 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcC-------CceEEEecccC-CHHHHHHHH
Confidence            4689999999999999999999999999998875 55566666666665432       45678899996 788888888


Q ss_pred             HHHHHH----cC--CccEEEeCCccC
Q 033624           94 QKAWEA----FG--RVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~----~~--~id~li~naG~~  113 (115)
                      +++.+.    ++  ++|+||||||+.
T Consensus        74 ~~~~~~~~~~~g~~~id~lv~~Ag~~   99 (252)
T PRK12747         74 SSLDNELQNRTGSTKFDILINNAGIG   99 (252)
T ss_pred             HHHHHHhhhhcCCCCCCEEEECCCcC
Confidence            877653    33  899999999974

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.68  E-value=7.2e-16  Score=103.11  Aligned_cols=82  Identities=43%  Similarity=0.622  Sum_probs=71.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .+++++|||++++||++++++|+++|++|++++|+.+....               ...+.++.+|++ ++++++.+++.
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~---------------~~~~~~~~~D~~-d~~~~~~~~~~   66 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP---------------IPGVELLELDVT-DDASVQAAVDE   66 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---------------cCCCeeEEeecC-CHHHHHHHHHH
Confidence            46789999999999999999999999999999998654321               124678899996 89999999999


Q ss_pred             HHHHcCCccEEEeCCccC
Q 033624           96 AWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~  113 (115)
                      +.+.++++|+||||||+.
T Consensus        67 ~~~~~g~~d~li~~ag~~   84 (270)
T PRK06179         67 VIARAGRIDVLVNNAGVG   84 (270)
T ss_pred             HHHhCCCCCEEEECCCCC
Confidence            999999999999999975

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.68  E-value=1.7e-15  Score=100.65  Aligned_cols=87  Identities=28%  Similarity=0.488  Sum_probs=71.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+++++|||+++|||+++++.|++.|++|+++.++.+..   .+.++.         ..+.++.+|++ ++++++.++
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~---------~~~~~~~~Dl~-~~~~~~~~~   70 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELRE---------KGVFTIKCDVG-NRDQVKKSK   70 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHh---------CCCeEEEecCC-CHHHHHHHH
Confidence            45789999999999999999999999999998887654322   222321         13568899996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|++|||||+.
T Consensus        71 ~~~~~~~~~id~li~~ag~~   90 (255)
T PRK06463         71 EVVEKEFGRVDVLVNNAGIM   90 (255)
T ss_pred             HHHHHHcCCCCEEEECCCcC
Confidence            99999999999999999974

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.5e-15  Score=101.95  Aligned_cols=87  Identities=41%  Similarity=0.583  Sum_probs=75.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .+++++|||++++||+.++++|+++|++|++++|+.+.++...+.+.          .++..+++|++ +++++..+++.
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~-~~~~~~~~~~~   70 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYG----------DRLLPLALDVT-DRAAVFAAVET   70 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcc----------CCeeEEEccCC-CHHHHHHHHHH
Confidence            46899999999999999999999999999999999877665544331          35678899995 89999999999


Q ss_pred             HHHHcCCccEEEeCCccC
Q 033624           96 AWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~  113 (115)
                      +.+.++++|++|||||+.
T Consensus        71 ~~~~~~~~d~vi~~ag~~   88 (275)
T PRK08263         71 AVEHFGRLDIVVNNAGYG   88 (275)
T ss_pred             HHHHcCCCCEEEECCCCc
Confidence            999999999999999975

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.67  E-value=2.4e-15  Score=98.71  Aligned_cols=90  Identities=31%  Similarity=0.499  Sum_probs=78.7

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +.+++++|||++++||..++++|+++|++|++++|+++..++..+.+...        .++.++.+|++ +.+++..+++
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--------~~~~~~~~D~~-~~~~~~~~~~   74 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK--------GNVLGLAADVR-DEADVQRAVD   74 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc--------CcEEEEEccCC-CHHHHHHHHH
Confidence            45899999999999999999999999999999999988777777766531        35778999995 8999999999


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                      ++.+.++++|++|||+|..
T Consensus        75 ~~~~~~~~~d~vi~~ag~~   93 (237)
T PRK07326         75 AIVAAFGGLDVLIANAGVG   93 (237)
T ss_pred             HHHHHcCCCCEEEECCCCC
Confidence            9988899999999999864

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.67  E-value=7.7e-16  Score=105.75  Aligned_cols=90  Identities=31%  Similarity=0.525  Sum_probs=69.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .|++++|||+++|||+++|++|+++|++|++++|+.+.+++..++++...     ...++..+.+|++++   +...+++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~-----~~~~~~~~~~Dl~~~---~~~~~~~  123 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKY-----SKTQIKTVVVDFSGD---IDEGVKR  123 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHC-----CCcEEEEEEEECCCC---cHHHHHH
Confidence            58999999999999999999999999999999999999888888876432     124677889999632   2223333


Q ss_pred             HHHHcC--CccEEEeCCccC
Q 033624           96 AWEAFG--RVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~--~id~li~naG~~  113 (115)
                      +.+..+  ++|++|||||+.
T Consensus       124 l~~~~~~~didilVnnAG~~  143 (320)
T PLN02780        124 IKETIEGLDVGVLINNVGVS  143 (320)
T ss_pred             HHHHhcCCCccEEEEecCcC
Confidence            334444  466999999985

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.67  E-value=1.9e-15  Score=99.88  Aligned_cols=94  Identities=31%  Similarity=0.570  Sum_probs=78.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecC-CCHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVC-ADGATIEIS   92 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~-~~~~~~~~~   92 (115)
                      .+.+++++|||++++||..++++|++.|++|++++|+.+..++..++++...      ..++.++.+|++ .++.+++.+
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~------~~~~~~~~~d~~~~~~~~~~~~   82 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG------GPQPAIIPLDLLTATPQNYQQL   82 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcC------CCCceEEEecccCCCHHHHHHH
Confidence            4579999999999999999999999999999999999888777777776432      134556667774 267889999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++.+.+.++++|++|||||..
T Consensus        83 ~~~~~~~~~~id~vi~~Ag~~  103 (247)
T PRK08945         83 ADTIEEQFGRLDGVLHNAGLL  103 (247)
T ss_pred             HHHHHHHhCCCCEEEECCccc
Confidence            999999999999999999874

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.67  E-value=2.7e-15  Score=99.65  Aligned_cols=88  Identities=31%  Similarity=0.475  Sum_probs=76.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +++++|||++++||.+++++|+++|++|++++|+.+..+...+.+..         .++..+.+|++ +.+++...++++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~---------~~~~~~~~D~~-~~~~~~~~~~~~   71 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGD---------ARFVPVACDLT-DAASLAAALANA   71 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC---------CceEEEEecCC-CHHHHHHHHHHH
Confidence            57899999999999999999999999999999998877766665521         35788999995 899999999999


Q ss_pred             HHHcCCccEEEeCCccCC
Q 033624           97 WEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        97 ~~~~~~id~li~naG~~~  114 (115)
                      .+.++++|++|||+|...
T Consensus        72 ~~~~~~~d~vi~~ag~~~   89 (257)
T PRK07074         72 AAERGPVDVLVANAGAAR   89 (257)
T ss_pred             HHHcCCCCEEEECCCCCC
Confidence            999999999999999753

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.66  E-value=3.3e-15  Score=97.82  Aligned_cols=90  Identities=32%  Similarity=0.392  Sum_probs=76.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+++++|||++++||..++++|+++|++|++++|+.+...+..+.+...         ....+.+|++ +.+++..++
T Consensus         4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---------~~~~~~~D~~-~~~~~~~~~   73 (239)
T PRK12828          4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD---------ALRIGGIDLV-DPQAARRAV   73 (239)
T ss_pred             CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc---------CceEEEeecC-CHHHHHHHH
Confidence            456899999999999999999999999999999999887666655555422         3456779995 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++...++++|++||++|..
T Consensus        74 ~~~~~~~~~~d~vi~~ag~~   93 (239)
T PRK12828         74 DEVNRQFGRLDALVNIAGAF   93 (239)
T ss_pred             HHHHHHhCCcCEEEECCccc
Confidence            99999999999999999864

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.66  E-value=2.6e-15  Score=99.91  Aligned_cols=90  Identities=32%  Similarity=0.470  Sum_probs=75.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+++++|||+++|||+++++.|+++|++|++++|+.+..++..+.+....      ..++..+.+|++ ++++++.++
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~~D~~-~~~~~~~~~   76 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH------GVDVAVHALDLS-SPEAREQLA   76 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhc------CCceEEEEecCC-CHHHHHHHH
Confidence            3578999999999999999999999999999999999888877777776432      246778999996 788887776


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      ++    ++++|++|||+|+..
T Consensus        77 ~~----~g~id~lv~~ag~~~   93 (259)
T PRK06125         77 AE----AGDIDILVNNAGAIP   93 (259)
T ss_pred             HH----hCCCCEEEECCCCCC
Confidence            53    578999999999753

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.66  E-value=2.4e-15  Score=101.16  Aligned_cols=84  Identities=30%  Similarity=0.438  Sum_probs=70.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .+++++|||+++|||++++++|+++|++|++++|+.+.++.+..             ..+..+.+|++ ++++++.++++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~-------------~~~~~~~~Dl~-d~~~~~~~~~~   68 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA-------------EGLEAFQLDYA-EPESIAALVAQ   68 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------------CCceEEEccCC-CHHHHHHHHHH
Confidence            46899999999999999999999999999999999776554322             13567889996 89999999998


Q ss_pred             HHHHc-CCccEEEeCCccC
Q 033624           96 AWEAF-GRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~-~~id~li~naG~~  113 (115)
                      +.+.+ +++|++|||||+.
T Consensus        69 ~~~~~~g~id~li~~Ag~~   87 (277)
T PRK05993         69 VLELSGGRLDALFNNGAYG   87 (277)
T ss_pred             HHHHcCCCccEEEECCCcC
Confidence            87665 6899999999974

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.66  E-value=3.4e-15  Score=98.36  Aligned_cols=93  Identities=33%  Similarity=0.542  Sum_probs=75.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc----cchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR----VDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATI   89 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~   89 (115)
                      .+++++++|||++++||+.++++|+++|++|++++|.    .+..+...+++...+       .++.++.+|++ +++++
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~-~~~~~   74 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAG-------GKALGLAFDVR-DFAAT   74 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcC-------CcEEEEEccCC-CHHHH
Confidence            3567899999999999999999999999999987653    333444445554322       46788999995 89999


Q ss_pred             HHHHHHHHHHcCCccEEEeCCccCC
Q 033624           90 EISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        90 ~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +.+++++.+.++++|++|||||+..
T Consensus        75 ~~~~~~~~~~~~~~d~vi~~ag~~~   99 (249)
T PRK12827         75 RAALDAGVEEFGRLDILVNNAGIAT   99 (249)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCC
Confidence            9999999888899999999999754

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.66  E-value=4.1e-15  Score=98.28  Aligned_cols=92  Identities=32%  Similarity=0.533  Sum_probs=74.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc-cchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ++++++++|||++++||+.++++|+++|++|++..++ ..........++..+       .++..+.+|++ +++++..+
T Consensus         3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~   74 (252)
T PRK06077          3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENG-------GEGIGVLADVS-TREGCETL   74 (252)
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcC-------CeeEEEEeccC-CHHHHHHH
Confidence            3568999999999999999999999999998877654 344444444454332       35678899996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|++|||||..
T Consensus        75 ~~~~~~~~~~~d~vi~~ag~~   95 (252)
T PRK06077         75 AKATIDRYGVADILVNNAGLG   95 (252)
T ss_pred             HHHHHHHcCCCCEEEECCCCC
Confidence            999999999999999999973

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.66  E-value=2.5e-15  Score=100.87  Aligned_cols=86  Identities=40%  Similarity=0.579  Sum_probs=73.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      .++++|||++++||+.++++|+++|++|+++.|+.+..+.+.+...          .++.++.+|++ +.+++..+++++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~-~~~~~~~~~~~~   70 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYG----------DRLWVLQLDVT-DSAAVRAVVDRA   70 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc----------CceEEEEccCC-CHHHHHHHHHHH
Confidence            4689999999999999999999999999999998766655444321          35778999996 899999999999


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                      .+.++++|+||||||..
T Consensus        71 ~~~~~~id~vi~~ag~~   87 (276)
T PRK06482         71 FAALGRIDVVVSNAGYG   87 (276)
T ss_pred             HHHcCCCCEEEECCCCC
Confidence            88899999999999975

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.66  E-value=3e-15  Score=99.56  Aligned_cols=91  Identities=35%  Similarity=0.491  Sum_probs=78.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+++++++|||++++||+.++++|+++|++|++++|+.+..+...+....         .++..+.+|++ +++++..+
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---------~~~~~~~~D~~-~~~~~~~~   76 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPG---------AKVTATVADVA-DPAQVERV   76 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---------CceEEEEccCC-CHHHHHHH
Confidence            346789999999999999999999999999999999988776665554421         25678899996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|++|||+|..
T Consensus        77 ~~~~~~~~~~~d~vi~~ag~~   97 (264)
T PRK12829         77 FDTAVERFGGLDVLVNNAGIA   97 (264)
T ss_pred             HHHHHHHhCCCCEEEECCCCC
Confidence            999988899999999999976

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.66  E-value=3.2e-15  Score=98.88  Aligned_cols=89  Identities=33%  Similarity=0.432  Sum_probs=77.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +++++|||++++||..+++.|+++|++|++++|+.+..+.+.+.+....       .++.++.+|++ +.+++..+++.+
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~~~~~   72 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAG-------GSVIYLVADVT-KEDEIADMIAAA   72 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CceEEEECCCC-CHHHHHHHHHHH
Confidence            4689999999999999999999999999999999887777776665332       46888999995 899999999999


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                      .+.++++|++|+|+|+.
T Consensus        73 ~~~~~~~d~vi~~a~~~   89 (255)
T TIGR01963        73 AAEFGGLDILVNNAGIQ   89 (255)
T ss_pred             HHhcCCCCEEEECCCCC
Confidence            88889999999999875

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.65  E-value=3.5e-15  Score=98.66  Aligned_cols=89  Identities=35%  Similarity=0.556  Sum_probs=71.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc-cchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ++++++++|||+++|||+++++.|+++|++|+++.++ .+..+.....+.          .++.++.+|++ ++++++.+
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~----------~~~~~~~~D~~-~~~~~~~~   70 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELG----------DRAIALQADVT-DREQVQAM   70 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC----------CceEEEEcCCC-CHHHHHHH
Confidence            3568999999999999999999999999999887654 443443333321          35778999996 89999999


Q ss_pred             HHHHHHHcCC-ccEEEeCCccC
Q 033624           93 VQKAWEAFGR-VDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~-id~li~naG~~  113 (115)
                      ++++.+.+++ +|++|||||+.
T Consensus        71 ~~~~~~~~g~~id~li~~ag~~   92 (253)
T PRK08642         71 FATATEHFGKPITTVVNNALAD   92 (253)
T ss_pred             HHHHHHHhCCCCeEEEECCCcc
Confidence            9999888887 99999999863

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.65  E-value=4.4e-15  Score=97.54  Aligned_cols=88  Identities=34%  Similarity=0.504  Sum_probs=73.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEec-ccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      |+++|||++++||..++++|++.|++|+++.| +.+..++....+...+       .++.++.+|++ +++++..+++++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~~~~~   72 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALG-------FDFRVVEGDVS-SFESCKAAVAKV   72 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhC-------CceEEEEecCC-CHHHHHHHHHHH
Confidence            57999999999999999999999999998887 5444444444443222       46888999996 899999999999


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                      .+.++++|++|||+|..
T Consensus        73 ~~~~~~id~vi~~ag~~   89 (242)
T TIGR01829        73 EAELGPIDVLVNNAGIT   89 (242)
T ss_pred             HHHcCCCcEEEECCCCC
Confidence            99999999999999974

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.65  E-value=3.1e-15  Score=100.09  Aligned_cols=89  Identities=31%  Similarity=0.483  Sum_probs=69.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEec-ccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHH----HHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATI----EIS   92 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~----~~~   92 (115)
                      ++++|||+++|||+.++++|+++|++|+++.| +.+.++...+.+....      +.++..+.+|++ +++++    +.+
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~Dv~-d~~~~~~~~~~~   74 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARR------PNSAVTCQADLS-NSATLFSRCEAI   74 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhcc------CCceEEEEccCC-CchhhHHHHHHH
Confidence            57999999999999999999999999998765 4556666666664321      235667899997 66544    566


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++.+.+.++++|+||||||+.
T Consensus        75 ~~~~~~~~g~iD~lv~nAG~~   95 (267)
T TIGR02685        75 IDACFRAFGRCDVLVNNASAF   95 (267)
T ss_pred             HHHHHHccCCceEEEECCccC
Confidence            666667789999999999974

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.65  E-value=7.4e-15  Score=96.54  Aligned_cols=91  Identities=43%  Similarity=0.593  Sum_probs=75.7

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc-hHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-RLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      +.+++++|||++++||..++++|+++|++|+++.|+.. ..+...+.++...       .++..+.+|++ +++++..++
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~-~~~~~~~~~   74 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALG-------GKALAVQGDVS-DAESVERAV   74 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcC-------CceEEEEcCCC-CHHHHHHHH
Confidence            46789999999999999999999999999988877654 3445555554322       46788999995 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|++|||||..
T Consensus        75 ~~~~~~~~~id~vi~~ag~~   94 (248)
T PRK05557         75 DEAKAEFGGVDILVNNAGIT   94 (248)
T ss_pred             HHHHHHcCCCCEEEECCCcC
Confidence            99988899999999999874

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.65  E-value=3.9e-15  Score=99.02  Aligned_cols=89  Identities=37%  Similarity=0.460  Sum_probs=74.9

Q ss_pred             EEEEecCCChHHHHHHHHHHH----hCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAK----AGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +++|||+++|||++++++|++    +|++|++++|+.+.+++..++++...     .+.++.++.+|++ +.++++.+++
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~v~~~~~Dl~-~~~~v~~~~~   75 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAER-----SGLRVVRVSLDLG-AEAGLEQLLK   75 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcC-----CCceEEEEEeccC-CHHHHHHHHH
Confidence            689999999999999999997    79999999999988888888776421     1246788999996 8999999999


Q ss_pred             HHHHHcCCc----cEEEeCCccC
Q 033624           95 KAWEAFGRV----DALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~i----d~li~naG~~  113 (115)
                      .+.+.++.+    |+||||||+.
T Consensus        76 ~~~~~~g~~~~~~~~lv~nAG~~   98 (256)
T TIGR01500        76 ALRELPRPKGLQRLLLINNAGTL   98 (256)
T ss_pred             HHHhccccCCCceEEEEeCCccc
Confidence            988776643    6999999975

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.65  E-value=4.1e-15  Score=99.73  Aligned_cols=82  Identities=37%  Similarity=0.562  Sum_probs=70.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      ++++|||+++|||+.++++|+++|++|++++|+.+..+....             ..+..+.+|++ ++++++.+++.+.
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-------------~~~~~~~~Dl~-~~~~~~~~~~~~~   67 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA-------------AGFTAVQLDVN-DGAALARLAEELE   67 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------------CCCeEEEeeCC-CHHHHHHHHHHHH
Confidence            689999999999999999999999999999998765543321             12457889996 8999999999998


Q ss_pred             HHcCCccEEEeCCccC
Q 033624           98 EAFGRVDALVNNAGIR  113 (115)
Q Consensus        98 ~~~~~id~li~naG~~  113 (115)
                      +.++++|++|||||+.
T Consensus        68 ~~~~~id~vi~~ag~~   83 (274)
T PRK05693         68 AEHGGLDVLINNAGYG   83 (274)
T ss_pred             HhcCCCCEEEECCCCC
Confidence            8899999999999974

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.64  E-value=5.2e-15  Score=97.45  Aligned_cols=88  Identities=27%  Similarity=0.407  Sum_probs=74.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEE-ecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      ++++|||++++||..++++|+++|++|++. .|+.+..++....++..+       .++..+.+|++ ++++++.+++++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-d~~~i~~~~~~~   73 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAG-------GKAFVLQADIS-DENQVVAMFTAI   73 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCC-------CeEEEEEccCC-CHHHHHHHHHHH
Confidence            579999999999999999999999998764 577666666666665432       45778999996 899999999999


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                      .+.++++|++|||+|..
T Consensus        74 ~~~~~~id~vi~~ag~~   90 (247)
T PRK09730         74 DQHDEPLAALVNNAGIL   90 (247)
T ss_pred             HHhCCCCCEEEECCCCC
Confidence            88899999999999974

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.64  E-value=1e-14  Score=96.49  Aligned_cols=94  Identities=50%  Similarity=0.707  Sum_probs=75.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch--HHHHHHHhhCCCCCCCCCccceEEEEeecCCC-HHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR--LKSLCDEINKPGMVGSPDSVRAVAVELDVCAD-GATIE   90 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~-~~~~~   90 (115)
                      .+.+++++|||+++|||+++|+.|+++|++|+++.++.+.  .+...+... ..    .. ..+.+..+|++ + .++++
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~----~~-~~~~~~~~Dvs-~~~~~v~   74 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-EA----GG-GRAAAVAADVS-DDEESVE   74 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-hc----CC-CcEEEEEecCC-CCHHHHH
Confidence            4578999999999999999999999999998888877654  333333333 11    00 35778889996 6 99999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccCC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      .+++.+...++++|++|||||+..
T Consensus        75 ~~~~~~~~~~g~id~lvnnAg~~~   98 (251)
T COG1028          75 ALVAAAEEEFGRIDILVNNAGIAG   98 (251)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCC
Confidence            999999999999999999999863

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.63  E-value=7.7e-15  Score=97.17  Aligned_cols=84  Identities=35%  Similarity=0.546  Sum_probs=73.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      +++|||++++||.++++.|+++|++|++++|+.+..+.....+.          .++.++.+|++ +.++++.+++++.+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dl~-~~~~i~~~~~~~~~   70 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG----------DNLYIAQLDVR-NRAAIEEMLASLPA   70 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----------cceEEEEecCC-CHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999877665554431          35778899995 89999999999989


Q ss_pred             HcCCccEEEeCCccC
Q 033624           99 AFGRVDALVNNAGIR  113 (115)
Q Consensus        99 ~~~~id~li~naG~~  113 (115)
                      .++++|++|||||+.
T Consensus        71 ~~~~id~vi~~ag~~   85 (248)
T PRK10538         71 EWRNIDVLVNNAGLA   85 (248)
T ss_pred             HcCCCCEEEECCCcc
Confidence            999999999999974

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.63  E-value=7.7e-15  Score=97.06  Aligned_cols=83  Identities=31%  Similarity=0.495  Sum_probs=72.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++++++++|||++++||..++++|+++|++|++++|+.         +...       ..++..+++|++ ++++++.++
T Consensus         5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~-------~~~~~~~~~D~~-~~~~~~~~~   67 (252)
T PRK08220          5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQE-------DYPFATFVLDVS-DAAAVAQVC   67 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhc-------CCceEEEEecCC-CHHHHHHHH
Confidence            46789999999999999999999999999999999875         1111       246788999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|++|||+|..
T Consensus        68 ~~~~~~~~~id~vi~~ag~~   87 (252)
T PRK08220         68 QRLLAETGPLDVLVNAAGIL   87 (252)
T ss_pred             HHHHHHcCCCCEEEECCCcC
Confidence            99999999999999999975

>PRK07069 short chain dehydrogenase; Validated

Probab=99.63  E-value=1e-14  Score=96.31  Aligned_cols=88  Identities=32%  Similarity=0.461  Sum_probs=73.0

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecc-cchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      ++|||++++||..+++.|+++|++|++++|+ .+..+...+.+....     ....+..+.+|++ ++++++.+++++.+
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~-~~~~~~~~~~~~~~   75 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAH-----GEGVAFAAVQDVT-DEAQWQALLAQAAD   75 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcC-----CCceEEEEEeecC-CHHHHHHHHHHHHH
Confidence            7999999999999999999999999999998 565666666554321     1123556889996 89999999999999


Q ss_pred             HcCCccEEEeCCccC
Q 033624           99 AFGRVDALVNNAGIR  113 (115)
Q Consensus        99 ~~~~id~li~naG~~  113 (115)
                      .++++|++|||||..
T Consensus        76 ~~~~id~vi~~ag~~   90 (251)
T PRK07069         76 AMGGLSVLVNNAGVG   90 (251)
T ss_pred             HcCCccEEEECCCcC
Confidence            999999999999975

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.62  E-value=9.4e-15  Score=96.04  Aligned_cols=86  Identities=30%  Similarity=0.398  Sum_probs=72.8

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecc-cchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      ++|||+++|||..++++|+++|++|++++|+ .+..+...+.++..+       .++.++.+|++ +++++..+++++..
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~Dl~-~~~~~~~~~~~~~~   72 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQG-------GNARLLQFDVA-DRVACRTLLEADIA   72 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcC-------CeEEEEEccCC-CHHHHHHHHHHHHH
Confidence            5899999999999999999999999888765 445566666665432       46889999995 89999999999888


Q ss_pred             HcCCccEEEeCCccC
Q 033624           99 AFGRVDALVNNAGIR  113 (115)
Q Consensus        99 ~~~~id~li~naG~~  113 (115)
                      .++++|++|+|+|+.
T Consensus        73 ~~~~i~~li~~ag~~   87 (239)
T TIGR01831        73 EHGAYYGVVLNAGIT   87 (239)
T ss_pred             HcCCCCEEEECCCCC
Confidence            899999999999975

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.62  E-value=5.6e-15  Score=94.10  Aligned_cols=88  Identities=25%  Similarity=0.461  Sum_probs=67.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCC-eEEEEeccc---chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV---DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +++|||+.++||..++++|++++. +|++++|+.   ....+..+.++..+       .++.++.+|++ ++++++.+++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g-------~~v~~~~~Dv~-d~~~v~~~~~   73 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAG-------ARVEYVQCDVT-DPEAVAAALA   73 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT--------EEEEEE--TT-SHHHHHHHHH
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCC-------CceeeeccCcc-CHHHHHHHHH
Confidence            689999999999999999999986 699999983   34556777777654       68999999996 8999999999


Q ss_pred             HHHHHcCCccEEEeCCccCC
Q 033624           95 KAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~~  114 (115)
                      ++.+.+++|+.+||+||...
T Consensus        74 ~~~~~~~~i~gVih~ag~~~   93 (181)
T PF08659_consen   74 QLRQRFGPIDGVIHAAGVLA   93 (181)
T ss_dssp             TSHTTSS-EEEEEE------
T ss_pred             HHHhccCCcceeeeeeeeec
Confidence            99999999999999999864

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.62  E-value=2e-14  Score=94.37  Aligned_cols=90  Identities=26%  Similarity=0.303  Sum_probs=77.1

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +++++++|||++++||..+++.|+++|++|++++|+.+..+.+.+.+...        .++.++.+|++ +++++..+++
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~Dl~-~~~~~~~~~~   73 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY--------GNIHYVVGDVS-STESARNVIE   73 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--------CCeEEEECCCC-CHHHHHHHHH
Confidence            56899999999999999999999999999999999987776665555432        25778899996 8999999999


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                      ++...++++|.+|+|+|..
T Consensus        74 ~~~~~~~~id~ii~~ag~~   92 (238)
T PRK05786         74 KAAKVLNAIDGLVVTVGGY   92 (238)
T ss_pred             HHHHHhCCCCEEEEcCCCc
Confidence            9888889999999999864

>PRK08324 short chain dehydrogenase; Validated

Probab=99.62  E-value=1.7e-14  Score=107.59  Aligned_cols=92  Identities=37%  Similarity=0.524  Sum_probs=80.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+.|++++|||++++||+.+++.|+++|++|++++|+.+..+...+.+...        .++..+.+|++ +++++..+
T Consensus       418 ~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~--------~~v~~v~~Dvt-d~~~v~~~  488 (681)
T PRK08324        418 KPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP--------DRALGVACDVT-DEAAVQAA  488 (681)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc--------CcEEEEEecCC-CHHHHHHH
Confidence            3467899999999999999999999999999999999988877766666431        35788999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|++|||||+.
T Consensus       489 ~~~~~~~~g~iDvvI~~AG~~  509 (681)
T PRK08324        489 FEEAALAFGGVDIVVSNAGIA  509 (681)
T ss_pred             HHHHHHHcCCCCEEEECCCCC
Confidence            999999999999999999965

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.61  E-value=2.7e-14  Score=93.95  Aligned_cols=88  Identities=33%  Similarity=0.411  Sum_probs=71.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc-hHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-RLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      ++++|||++++||..+++.|+++|++|++++|+.. ...+....+...       ..++.++.+|++ +.+++..+++.+
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~D~~-~~~~v~~~~~~~   74 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFT-------EDQVRLKELDVT-DTEECAEALAEI   74 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhcc-------CCeEEEEEcCCC-CHHHHHHHHHHH
Confidence            58999999999999999999999999999998854 122222222111       246888999996 899999999999


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                      ..+++++|++|||+|..
T Consensus        75 ~~~~~~id~vi~~ag~~   91 (245)
T PRK12824         75 EEEEGPVDILVNNAGIT   91 (245)
T ss_pred             HHHcCCCCEEEECCCCC
Confidence            99999999999999975

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.61  E-value=2.8e-14  Score=93.78  Aligned_cols=91  Identities=46%  Similarity=0.659  Sum_probs=73.9

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc-hHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-RLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      +..++++|||++++||..++++|+++|++|++..++.. ..+...+.+....       .++.++.+|++ +++++..++
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~v~~~~   75 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALG-------RRAQAVQADVT-DKAALEAAV   75 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC-------CceEEEECCcC-CHHHHHHHH
Confidence            45689999999999999999999999999887666543 3444445554332       45788999995 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|++|||||..
T Consensus        76 ~~~~~~~~~id~vi~~ag~~   95 (249)
T PRK12825         76 AAAVERFGRIDILVNNAGIF   95 (249)
T ss_pred             HHHHHHcCCCCEEEECCccC
Confidence            99988889999999999964

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.59  E-value=2.6e-14  Score=94.25  Aligned_cols=87  Identities=31%  Similarity=0.440  Sum_probs=72.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      ++++|||+++|||..++++|++.|++|++++|+.+..+...+.+....      ..++.++++|++ ++++++.+++++.
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~Dl~-~~~~~~~~~~~~~   74 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARG------AVAVSTHELDIL-DTASHAAFLDSLP   74 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhc------CCeEEEEecCCC-ChHHHHHHHHHHh
Confidence            579999999999999999999999999999999887777666665322      246889999996 8888988888764


Q ss_pred             HHcCCccEEEeCCccCC
Q 033624           98 EAFGRVDALVNNAGIRG  114 (115)
Q Consensus        98 ~~~~~id~li~naG~~~  114 (115)
                      .   ++|++|||+|...
T Consensus        75 ~---~~d~vv~~ag~~~   88 (243)
T PRK07102         75 A---LPDIVLIAVGTLG   88 (243)
T ss_pred             h---cCCEEEECCcCCC
Confidence            4   4699999999753

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.59  E-value=1.5e-14  Score=93.19  Aligned_cols=85  Identities=28%  Similarity=0.430  Sum_probs=73.4

Q ss_pred             CCcEEEEecCC-ChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           16 NEKVVMVTGAS-SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        16 ~~~~~lvtG~~-~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      ..+.++|||++ ||||.++++++.+.|+.|+.+.|+.+....+...            ..+..+..|++ +++.+..+..
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~------------~gl~~~kLDV~-~~~~V~~v~~   72 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ------------FGLKPYKLDVS-KPEEVVTVSG   72 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh------------hCCeeEEeccC-ChHHHHHHHH
Confidence            46789999985 7899999999999999999999999887765532            24778999995 8999999999


Q ss_pred             HHHH-HcCCccEEEeCCccC
Q 033624           95 KAWE-AFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~-~~~~id~li~naG~~  113 (115)
                      ++++ ..|++|+|+||||..
T Consensus        73 evr~~~~Gkld~L~NNAG~~   92 (289)
T KOG1209|consen   73 EVRANPDGKLDLLYNNAGQS   92 (289)
T ss_pred             HHhhCCCCceEEEEcCCCCC
Confidence            9988 689999999999963

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.59  E-value=4.3e-14  Score=92.59  Aligned_cols=86  Identities=38%  Similarity=0.630  Sum_probs=72.3

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEeccc-chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      ++|||++++||..++++|+++|++|++++|+. +..+...+.++..+       .++..+.+|++ ++.+++.+++.+..
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~~~~~~~   72 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYG-------VKALGVVCDVS-DREDVKAVVEEIEE   72 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcC-------CceEEEEecCC-CHHHHHHHHHHHHH
Confidence            58999999999999999999999999998875 44445555555432       46788999996 89999999999988


Q ss_pred             HcCCccEEEeCCccC
Q 033624           99 AFGRVDALVNNAGIR  113 (115)
Q Consensus        99 ~~~~id~li~naG~~  113 (115)
                      .++++|++|||+|..
T Consensus        73 ~~~~id~vi~~ag~~   87 (239)
T TIGR01830        73 ELGPIDILVNNAGIT   87 (239)
T ss_pred             HhCCCCEEEECCCCC
Confidence            899999999999975

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.58  E-value=3.8e-14  Score=93.34  Aligned_cols=96  Identities=25%  Similarity=0.390  Sum_probs=82.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-----eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-----RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-----~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      ..|+++|||+++|||.++|.+|++...     ++++.+|+.++.++.+..++...+   ....++..+.+|++ +..++.
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p---~~~i~~~yvlvD~s-Nm~Sv~   77 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHP---KSTIEVTYVLVDVS-NMQSVF   77 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCC---CceeEEEEEEEehh-hHHHHH
Confidence            468999999999999999999997643     477889999999999999987652   22467889999995 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccCCC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIRGN  115 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~~~  115 (115)
                      ++..++.+++.++|.+..|||+..+
T Consensus        78 ~A~~di~~rf~~ld~iylNAg~~~~  102 (341)
T KOG1478|consen   78 RASKDIKQRFQRLDYIYLNAGIMPN  102 (341)
T ss_pred             HHHHHHHHHhhhccEEEEccccCCC
Confidence            9999999999999999999998753

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.58  E-value=4.9e-14  Score=98.16  Aligned_cols=89  Identities=20%  Similarity=0.225  Sum_probs=71.1

Q ss_pred             CCcEEEEecCCChHHHH--HHHHHHHhCCeEEEEecccchH------------HHHHHHhhCCCCCCCCCccceEEEEee
Q 033624           16 NEKVVMVTGASSGLGRE--FCLDLAKAGCRIVAAARRVDRL------------KSLCDEINKPGMVGSPDSVRAVAVELD   81 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~--~a~~l~~~g~~v~~~~r~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~d   81 (115)
                      .+|++||||+++|||.+  +|+.| +.|++|+++++..+..            ..+.+.++..+       ..+..+.||
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G-------~~a~~i~~D  111 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAG-------LYAKSINGD  111 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcC-------CceEEEEcC
Confidence            47999999999999999  89999 9999988887543221            12333443322       456788999


Q ss_pred             cCCCHHHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           82 VCADGATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        82 i~~~~~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      ++ ++++++.+++.+.+.+|+||+||||+|..
T Consensus       112 Vs-s~E~v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        112 AF-SDEIKQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             CC-CHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence            96 89999999999999999999999999864

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.57  E-value=6e-14  Score=100.11  Aligned_cols=88  Identities=28%  Similarity=0.430  Sum_probs=71.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc--chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV--DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .+.+++++|||+++|||..++++|+++|++|++++++.  +.+.+....+            ....+.+|++ ++++++.
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~------------~~~~~~~Dv~-~~~~~~~  273 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV------------GGTALALDIT-APDAPAR  273 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc------------CCeEEEEeCC-CHHHHHH
Confidence            35689999999999999999999999999999998753  2223322222            1346789996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+.+.++++|++|||||+..
T Consensus       274 ~~~~~~~~~g~id~vi~~AG~~~  296 (450)
T PRK08261        274 IAEHLAERHGGLDIVVHNAGITR  296 (450)
T ss_pred             HHHHHHHhCCCCCEEEECCCcCC
Confidence            99999999999999999999753

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.56  E-value=1e-13  Score=91.23  Aligned_cols=84  Identities=45%  Similarity=0.635  Sum_probs=67.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+.+++++|||++++||..+++.|+++|++|++++|+.+..++..+.+            ...++.+|++ +.+++..+
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~------------~~~~~~~D~~-~~~~v~~~   71 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET------------GCEPLRLDVG-DDAAIRAA   71 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------------CCeEEEecCC-CHHHHHHH
Confidence            3467899999999999999999999999999999999877665544332            2446789996 77777766


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++.    .+++|++|||||..
T Consensus        72 ~~~----~~~~d~vi~~ag~~   88 (245)
T PRK07060         72 LAA----AGAFDGLVNCAGIA   88 (245)
T ss_pred             HHH----hCCCCEEEECCCCC
Confidence            554    57899999999974

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.56  E-value=9.4e-14  Score=92.09  Aligned_cols=83  Identities=34%  Similarity=0.535  Sum_probs=66.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +++++|||++++||+.++++|+++|++|++++|+.+...+..+.....+       ..+..+.+|++ +++++...+.  
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~~~--   71 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRG-------LALRVEKLDLT-DAIDRAQAAE--   71 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CcceEEEeeCC-CHHHHHHHhc--
Confidence            5789999999999999999999999999999998776666655554332       35778899996 7776665432  


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                          +++|+||||||..
T Consensus        72 ----~~id~vi~~ag~~   84 (257)
T PRK09291         72 ----WDVDVLLNNAGIG   84 (257)
T ss_pred             ----CCCCEEEECCCcC
Confidence                3799999999964

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.56  E-value=2.6e-14  Score=97.46  Aligned_cols=100  Identities=22%  Similarity=0.316  Sum_probs=63.1

Q ss_pred             CCCCCcEEEEecCC--ChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhh----------CCCCC--------CCCCc
Q 033624           13 HDLNEKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEIN----------KPGMV--------GSPDS   72 (115)
Q Consensus        13 ~~~~~~~~lvtG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~----------~~~~~--------~~~~~   72 (115)
                      .+++||+++|||++  +|||+++|+.|+++|++|++.++.+ .+....+..+          ..+..        ...+.
T Consensus         4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~   82 (299)
T PRK06300          4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF   82 (299)
T ss_pred             cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence            45789999999995  9999999999999999999976541 1111100000          00000        00000


Q ss_pred             cceEEEEeecCC-------CHHHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           73 VRAVAVELDVCA-------DGATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        73 ~~~~~~~~di~~-------~~~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .....+.+|+++       .+.+++.+++++.++++++|+||||||+.
T Consensus        83 ~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~  130 (299)
T PRK06300         83 DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANS  130 (299)
T ss_pred             CCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcC
Confidence            011122222221       23468999999999999999999999864

>PRK12742 oxidoreductase; Provisional

Probab=99.55  E-value=1.5e-13  Score=90.19  Aligned_cols=83  Identities=30%  Similarity=0.386  Sum_probs=62.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc-cchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .+++++++|||+++|||+++++.|+++|++|+++.++ .+..+++...+            .+.++.+|++ +.+++..+
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~------------~~~~~~~D~~-~~~~~~~~   69 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET------------GATAVQTDSA-DRDAVIDV   69 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh------------CCeEEecCCC-CHHHHHHH
Confidence            4678999999999999999999999999999887653 34444333322            2346789996 77766665


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++    .++++|++|||||..
T Consensus        70 ~~----~~~~id~li~~ag~~   86 (237)
T PRK12742         70 VR----KSGALDILVVNAGIA   86 (237)
T ss_pred             HH----HhCCCcEEEECCCCC
Confidence            54    357899999999974

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.53  E-value=1.5e-13  Score=89.88  Aligned_cols=81  Identities=28%  Similarity=0.382  Sum_probs=66.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      ++++|||++++||.+++++|+++|++|++++|+++..+.+.+ +           ..+.++.+|++ ++++++.+++.+.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~-----------~~~~~~~~D~~-d~~~~~~~~~~~~   68 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-L-----------PGVHIEKLDMN-DPASLDQLLQRLQ   68 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-c-----------cccceEEcCCC-CHHHHHHHHHHhh
Confidence            579999999999999999999999999999999876544321 1           13557789995 8889998888764


Q ss_pred             HHcCCccEEEeCCccC
Q 033624           98 EAFGRVDALVNNAGIR  113 (115)
Q Consensus        98 ~~~~~id~li~naG~~  113 (115)
                      .  +++|++|||||+.
T Consensus        69 ~--~~id~vi~~ag~~   82 (225)
T PRK08177         69 G--QRFDLLFVNAGIS   82 (225)
T ss_pred             c--CCCCEEEEcCccc
Confidence            3  4799999999985

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.52  E-value=2.6e-13  Score=91.59  Aligned_cols=92  Identities=35%  Similarity=0.495  Sum_probs=77.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ....+|.++|||+.+|+|+.+|++|.++|++|++....++..+.+..+.+         ..+...++.|++ ++++++++
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~---------s~rl~t~~LDVT-~~esi~~a   94 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK---------SPRLRTLQLDVT-KPESVKEA   94 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc---------CCcceeEeeccC-CHHHHHHH
Confidence            34568999999999999999999999999999998877777776666553         246778899997 89999999


Q ss_pred             HHHHHHHcC--CccEEEeCCccCC
Q 033624           93 VQKAWEAFG--RVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~--~id~li~naG~~~  114 (115)
                      ...+.+..+  .++.||||||+.+
T Consensus        95 ~~~V~~~l~~~gLwglVNNAGi~~  118 (322)
T KOG1610|consen   95 AQWVKKHLGEDGLWGLVNNAGISG  118 (322)
T ss_pred             HHHHHHhcccccceeEEecccccc
Confidence            988887653  6999999999764

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.52  E-value=1.3e-13  Score=91.66  Aligned_cols=81  Identities=16%  Similarity=0.286  Sum_probs=60.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+++++++|||+++|||++++++|+++|++|++++|+......   ... .        .....+.+|++ +.+++.  
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~~-~--------~~~~~~~~D~~-~~~~~~--   74 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SND-E--------SPNEWIKWECG-KEESLD--   74 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hhc-c--------CCCeEEEeeCC-CHHHHH--
Confidence            35678999999999999999999999999999999987632111   111 1        11246789996 665544  


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                           +.++++|++|||||+.
T Consensus        75 -----~~~~~iDilVnnAG~~   90 (245)
T PRK12367         75 -----KQLASLDVLILNHGIN   90 (245)
T ss_pred             -----HhcCCCCEEEECCccC
Confidence                 3457899999999974

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.52  E-value=7.6e-14  Score=92.11  Aligned_cols=82  Identities=35%  Similarity=0.592  Sum_probs=69.4

Q ss_pred             cCC--ChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHHHc-
Q 033624           24 GAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAF-  100 (115)
Q Consensus        24 G~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~~~-  100 (115)
                      |++  +|||+++|+.|+++|++|++++|+.+..++..+++.+..      +.+  .+.+|++ ++++++.+++++.+.+ 
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~------~~~--~~~~D~~-~~~~v~~~~~~~~~~~~   71 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEY------GAE--VIQCDLS-DEESVEALFDEAVERFG   71 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHT------TSE--EEESCTT-SHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHc------CCc--eEeecCc-chHHHHHHHHHHHhhcC
Confidence            455  999999999999999999999999988766666665432      123  4999996 8999999999999999 


Q ss_pred             CCccEEEeCCccCC
Q 033624          101 GRVDALVNNAGIRG  114 (115)
Q Consensus       101 ~~id~li~naG~~~  114 (115)
                      ++||+||||+|...
T Consensus        72 g~iD~lV~~a~~~~   85 (241)
T PF13561_consen   72 GRIDILVNNAGISP   85 (241)
T ss_dssp             SSESEEEEEEESCT
T ss_pred             CCeEEEEecccccc
Confidence            99999999998754

...

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.52  E-value=3.2e-13  Score=84.23  Aligned_cols=88  Identities=23%  Similarity=0.331  Sum_probs=70.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHH---HHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSL---CDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++++|||++++||.+++++|+++|+ .|++.+|+.+..+..   .+.++..       ..++..+.+|++ ++..+..++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~~D~~-~~~~~~~~~   72 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL-------GAEVTVVACDVA-DRAALAAAL   72 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc-------CCeEEEEECCCC-CHHHHHHHH
Confidence            4789999999999999999999997 577778875543322   2344332       246778999996 889999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++...++++|++|||+|+.
T Consensus        73 ~~~~~~~~~id~li~~ag~~   92 (180)
T smart00822       73 AAIPARLGPLRGVIHAAGVL   92 (180)
T ss_pred             HHHHHHcCCeeEEEEccccC
Confidence            99988899999999999964

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.52  E-value=1.7e-13  Score=90.35  Aligned_cols=81  Identities=27%  Similarity=0.415  Sum_probs=65.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      ++++|||+++|||..++++|+++|++|++++|+.+..++..+.    .       .++.++.+|++ +.++++.+++++.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~----~-------~~~~~~~~D~~-~~~~~~~~~~~~~   69 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ----S-------ANIFTLAFDVT-DHPGTKAALSQLP   69 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh----c-------CCCeEEEeeCC-CHHHHHHHHHhcc
Confidence            5799999999999999999999999999999987665544332    1       24678899996 8889988887753


Q ss_pred             HHcCCccEEEeCCccC
Q 033624           98 EAFGRVDALVNNAGIR  113 (115)
Q Consensus        98 ~~~~~id~li~naG~~  113 (115)
                         ..+|++|+|||..
T Consensus        70 ---~~~d~~i~~ag~~   82 (240)
T PRK06101         70 ---FIPELWIFNAGDC   82 (240)
T ss_pred             ---cCCCEEEEcCccc
Confidence               2479999999853

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.51  E-value=2.3e-13  Score=89.01  Aligned_cols=80  Identities=28%  Similarity=0.417  Sum_probs=66.5

Q ss_pred             EEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHHHc
Q 033624           21 MVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAF  100 (115)
Q Consensus        21 lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~~~  100 (115)
                      +|||++++||+.++++|+++|++|++++|+.+..+...+.++.        ..++.++.+|++ +++++..++++    .
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dl~-~~~~~~~~~~~----~   67 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG--------GAPVRTAALDIT-DEAAVDAFFAE----A   67 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--------CCceEEEEccCC-CHHHHHHHHHh----c
Confidence            5899999999999999999999999999998777666665542        145778899996 78888877765    4


Q ss_pred             CCccEEEeCCccC
Q 033624          101 GRVDALVNNAGIR  113 (115)
Q Consensus       101 ~~id~li~naG~~  113 (115)
                      +++|++|||+|+.
T Consensus        68 ~~id~li~~ag~~   80 (230)
T PRK07041         68 GPFDHVVITAADT   80 (230)
T ss_pred             CCCCEEEECCCCC
Confidence            7899999999974

>PRK08264 short chain dehydrogenase; Validated

Probab=99.51  E-value=3.7e-13  Score=88.42  Aligned_cols=80  Identities=41%  Similarity=0.626  Sum_probs=66.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .+.+++++|||++++||.+++++|+++|+ +|++++|+.++.++       .       ..++.++.+|++ +.+++..+
T Consensus         3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~-------~~~~~~~~~D~~-~~~~~~~~   67 (238)
T PRK08264          3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------L-------GPRVVPLQLDVT-DPASVAAA   67 (238)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------c-------CCceEEEEecCC-CHHHHHHH
Confidence            45689999999999999999999999999 99999998765443       1       135778899996 77777766


Q ss_pred             HHHHHHHcCCccEEEeCCcc
Q 033624           93 VQKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~  112 (115)
                      ++.    .+++|++|||+|+
T Consensus        68 ~~~----~~~id~vi~~ag~   83 (238)
T PRK08264         68 AEA----ASDVTILVNNAGI   83 (238)
T ss_pred             HHh----cCCCCEEEECCCc
Confidence            654    4689999999997

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.50  E-value=3e-13  Score=88.58  Aligned_cols=78  Identities=26%  Similarity=0.324  Sum_probs=64.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      +++|||+++|||+++++.|+++|++|++++|+.+++++..+.+            .+.++.+|++ ++++++.+++++. 
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~------------~~~~~~~D~~-~~~~v~~~~~~~~-   67 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL------------DVDAIVCDNT-DPASLEEARGLFP-   67 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc------------cCcEEecCCC-CHHHHHHHHHHHh-
Confidence            4899999999999999999999999999999887766554433            2446789995 8888988877654 


Q ss_pred             HcCCccEEEeCCcc
Q 033624           99 AFGRVDALVNNAGI  112 (115)
Q Consensus        99 ~~~~id~li~naG~  112 (115)
                        +++|++|||||.
T Consensus        68 --~~id~lv~~ag~   79 (223)
T PRK05884         68 --HHLDTIVNVPAP   79 (223)
T ss_pred             --hcCcEEEECCCc
Confidence              269999999985

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.50  E-value=3.7e-13  Score=110.24  Aligned_cols=90  Identities=22%  Similarity=0.336  Sum_probs=70.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHh-CCeEEEEecccc--------------hH--------------------------
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVD--------------RL--------------------------   54 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~-g~~v~~~~r~~~--------------~~--------------------------   54 (115)
                      .++++|||||++|||..++++|+++ |++|++++|+..              .+                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            4899999999999999999999988 699999999821              00                          


Q ss_pred             -------HHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           55 -------KSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        55 -------~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                             ....+.++..       +.++.++.+|++ +.+.++.+++++.+. ++||+||||||+..
T Consensus      2076 ~~~~~ei~~~la~l~~~-------G~~v~y~~~DVt-D~~av~~av~~v~~~-g~IDgVVhnAGv~~ 2133 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAA-------GASAEYASADVT-NSVSVAATVQPLNKT-LQITGIIHGAGVLA 2133 (2582)
T ss_pred             cchhHHHHHHHHHHHhc-------CCcEEEEEccCC-CHHHHHHHHHHHHHh-CCCcEEEECCccCC
Confidence                   1111222222       356888999996 899999999998776 68999999999864

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.50  E-value=7.9e-14  Score=87.42  Aligned_cols=86  Identities=35%  Similarity=0.474  Sum_probs=71.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+.|+.+++||+.-|||++++..|+..|++|+.+.|+++.+.++.++.          +.-+..+..|+. .++.+.+.
T Consensus         3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~----------p~~I~Pi~~Dls-~wea~~~~   71 (245)
T KOG1207|consen    3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET----------PSLIIPIVGDLS-AWEALFKL   71 (245)
T ss_pred             ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC----------CcceeeeEeccc-HHHHHHHh
Confidence            3568999999999999999999999999999999999999988877654          345888999995 55544443


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                          ....+++|.|+||||+.
T Consensus        72 ----l~~v~pidgLVNNAgvA   88 (245)
T KOG1207|consen   72 ----LVPVFPIDGLVNNAGVA   88 (245)
T ss_pred             ----hcccCchhhhhccchhh
Confidence                34457899999999985

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.50  E-value=4.6e-13  Score=88.60  Aligned_cols=85  Identities=26%  Similarity=0.441  Sum_probs=66.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc-hHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-RLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      ++++|||+++|||++++++|+++|++|++++|+.. .+++..+   ..       ..++.++.+|++ +++++..+++++
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~---~~-------~~~~~~~~~D~~-~~~~~~~~~~~~   70 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE---QY-------NSNLTFHSLDLQ-DVHELETNFNEI   70 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh---cc-------CCceEEEEecCC-CHHHHHHHHHHH
Confidence            58999999999999999999999999999999863 3322221   11       245778999996 899999999988


Q ss_pred             HHHcCC--cc--EEEeCCccC
Q 033624           97 WEAFGR--VD--ALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~--id--~li~naG~~  113 (115)
                      ...++.  ++  ++|+|||..
T Consensus        71 ~~~~~~~~~~~~~~v~~ag~~   91 (251)
T PRK06924         71 LSSIQEDNVSSIHLINNAGMV   91 (251)
T ss_pred             HHhcCcccCCceEEEEcceec
Confidence            776653  22  799999874

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.50  E-value=6.6e-13  Score=86.23  Aligned_cols=93  Identities=17%  Similarity=0.286  Sum_probs=76.4

Q ss_pred             CCCCCcEEEEecCC--ChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           13 HDLNEKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        13 ~~~~~~~~lvtG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      ..++||+++|+|-.  .+|+..+|+.|.++|+++..+..++ ++++..+++.+..       .....++||++ ++++++
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~-------~s~~v~~cDV~-~d~~i~   72 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEEL-------GSDLVLPCDVT-NDESID   72 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhc-------cCCeEEecCCC-CHHHHH
Confidence            35789999999964  6999999999999999999988776 4444444444322       23568999996 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccCC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      .+|+++.++|+++|+|||+-|+.+
T Consensus        73 ~~f~~i~~~~g~lD~lVHsIaFa~   96 (259)
T COG0623          73 ALFATIKKKWGKLDGLVHSIAFAP   96 (259)
T ss_pred             HHHHHHHHhhCcccEEEEEeccCC
Confidence            999999999999999999988764

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.49  E-value=6e-13  Score=87.77  Aligned_cols=82  Identities=32%  Similarity=0.399  Sum_probs=65.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH-HH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK-AW   97 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~-~~   97 (115)
                      +++|||+++|||+.++++|+++|++|++++|+.+..  .   ....       +.++.++.+|++ +.++++.++++ +.
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~---~~~~-------~~~~~~~~~D~~-~~~~~~~~~~~~~~   69 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L---AAAA-------GERLAEVELDLS-DAAAAAAWLAGDLL   69 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h---hhcc-------CCeEEEEEeccC-CHHHHHHHHHHHHH
Confidence            699999999999999999999999999999876531  1   1111       246788999996 88889887776 54


Q ss_pred             HHc---CCccEEEeCCccC
Q 033624           98 EAF---GRVDALVNNAGIR  113 (115)
Q Consensus        98 ~~~---~~id~li~naG~~  113 (115)
                      ..+   +++|++|||||+.
T Consensus        70 ~~~~~~~~~~~~v~~ag~~   88 (243)
T PRK07023         70 AAFVDGASRVLLINNAGTV   88 (243)
T ss_pred             HHhccCCCceEEEEcCccc
Confidence            444   4799999999975

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.49  E-value=2.3e-13  Score=89.27  Aligned_cols=77  Identities=26%  Similarity=0.392  Sum_probs=61.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++++++++|||++++||.+++++|+++|++|++++|+....      .          ..++..+.+|++ ++      +
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~----------~~~~~~~~~D~~-~~------~   58 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------L----------SGNFHFLQLDLS-DD------L   58 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------c----------CCcEEEEECChH-HH------H
Confidence            36789999999999999999999999999999999875321      0          135778899995 44      4


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|++|||||+.
T Consensus        59 ~~~~~~~~~id~lv~~ag~~   78 (235)
T PRK06550         59 EPLFDWVPSVDILCNTAGIL   78 (235)
T ss_pred             HHHHHhhCCCCEEEECCCCC
Confidence            55556678999999999964

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.48  E-value=7.1e-13  Score=93.58  Aligned_cols=82  Identities=30%  Similarity=0.444  Sum_probs=62.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+++++++|||+++|||++++++|+++|++|++++|+.++....   +...       ...+..+.+|++ +++.+..  
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~---~~~~-------~~~v~~v~~Dvs-d~~~v~~--  241 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLE---INGE-------DLPVKTLHWQVG-QEAALAE--  241 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---Hhhc-------CCCeEEEEeeCC-CHHHHHH--
Confidence            46789999999999999999999999999999999887654332   2111       123567889996 6665543  


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                           .++++|++|||||+.
T Consensus       242 -----~l~~IDiLInnAGi~  256 (406)
T PRK07424        242 -----LLEKVDILIINHGIN  256 (406)
T ss_pred             -----HhCCCCEEEECCCcC
Confidence                 346899999999975

>PRK08017 oxidoreductase; Provisional

Probab=99.46  E-value=1.7e-12  Score=86.08  Aligned_cols=82  Identities=33%  Similarity=0.514  Sum_probs=67.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      ++++|||++++||.++++.|+++|++|++++|+.+..+...+             ..+..+.+|++ +.+++..+++.+.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-------------~~~~~~~~D~~-~~~~~~~~~~~i~   68 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS-------------LGFTGILLDLD-DPESVERAADEVI   68 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh-------------CCCeEEEeecC-CHHHHHHHHHHHH
Confidence            689999999999999999999999999999998766544321             12557889995 8888888888876


Q ss_pred             HHc-CCccEEEeCCccC
Q 033624           98 EAF-GRVDALVNNAGIR  113 (115)
Q Consensus        98 ~~~-~~id~li~naG~~  113 (115)
                      ... +++|++|||+|+.
T Consensus        69 ~~~~~~~~~ii~~ag~~   85 (256)
T PRK08017         69 ALTDNRLYGLFNNAGFG   85 (256)
T ss_pred             HhcCCCCeEEEECCCCC
Confidence            643 6899999999964

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.46  E-value=1.5e-12  Score=85.30  Aligned_cols=79  Identities=30%  Similarity=0.412  Sum_probs=66.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .+++++|||++++||+.++++|+++|++|++++|+.+.         ..         ...++.+|++ ++++++.++++
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~---------~~---------~~~~~~~D~~-~~~~~~~~~~~   62 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID---------DF---------PGELFACDLA-DIEQTAATLAQ   62 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc---------cc---------CceEEEeeCC-CHHHHHHHHHH
Confidence            47899999999999999999999999999999988653         00         1136789996 88999999998


Q ss_pred             HHHHcCCccEEEeCCccCC
Q 033624           96 AWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~~  114 (115)
                      +.+.+ ++|++|||+|+..
T Consensus        63 ~~~~~-~~d~vi~~ag~~~   80 (234)
T PRK07577         63 INEIH-PVDAIVNNVGIAL   80 (234)
T ss_pred             HHHhC-CCcEEEECCCCCC
Confidence            87776 6899999999753

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.45  E-value=1.8e-12  Score=84.07  Aligned_cols=90  Identities=29%  Similarity=0.384  Sum_probs=68.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHh-CCeEEE-EecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKA-GCRIVA-AARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~-g~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      .+.++|||+++|||+.++++|... |-.+++ ..|+++...+..+.....       ..+++.++.|++ +++++..+++
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~-------d~rvHii~Ldvt-~deS~~~~~~   74 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKS-------DSRVHIIQLDVT-CDESIDNFVQ   74 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhcc-------CCceEEEEEecc-cHHHHHHHHH
Confidence            345999999999999999999964 555554 456677653323322221       368999999996 8899999999


Q ss_pred             HHHHH--cCCccEEEeCCccCC
Q 033624           95 KAWEA--FGRVDALVNNAGIRG  114 (115)
Q Consensus        95 ~~~~~--~~~id~li~naG~~~  114 (115)
                      ++.+-  ...+|+||||||+..
T Consensus        75 ~V~~iVg~~GlnlLinNaGi~~   96 (249)
T KOG1611|consen   75 EVEKIVGSDGLNLLINNAGIAL   96 (249)
T ss_pred             HHHhhcccCCceEEEeccceee
Confidence            99887  568999999999863

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.44  E-value=2.4e-12  Score=93.70  Aligned_cols=93  Identities=24%  Similarity=0.352  Sum_probs=69.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCC--CCCCCccceEEEEeecCCCHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGM--VGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      ...+|++++|||++|+||+.++++|++.|++|++++|+.+..+.+.+.+.....  .+.....++.++.+|++ +.+++.
T Consensus        76 ~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLt-D~esI~  154 (576)
T PLN03209         76 DTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLE-KPDQIG  154 (576)
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCC-CHHHHH
Confidence            345689999999999999999999999999999999998887766655542110  00001135788999996 666554


Q ss_pred             HHHHHHHHHcCCccEEEeCCccC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .       .++++|+||||+|..
T Consensus       155 ~-------aLggiDiVVn~AG~~  170 (576)
T PLN03209        155 P-------ALGNASVVICCIGAS  170 (576)
T ss_pred             H-------HhcCCCEEEEccccc
Confidence            3       356799999999874

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.44  E-value=1.1e-12  Score=88.49  Aligned_cols=90  Identities=23%  Similarity=0.347  Sum_probs=80.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      ++++|||+++|||+++|.++...|+.|.++.|+..++.++.+.++-...     ...+.++.+|+ .+.+++...+++++
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~-----~~~v~~~S~d~-~~Y~~v~~~~~~l~  107 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQ-----VEDVSYKSVDV-IDYDSVSKVIEELR  107 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhc-----cceeeEecccc-ccHHHHHHHHhhhh
Confidence            7999999999999999999999999999999999999999888875431     12377899999 58999999999999


Q ss_pred             HHcCCccEEEeCCccC
Q 033624           98 EAFGRVDALVNNAGIR  113 (115)
Q Consensus        98 ~~~~~id~li~naG~~  113 (115)
                      ...+.+|.+|+|||+.
T Consensus       108 ~~~~~~d~l~~cAG~~  123 (331)
T KOG1210|consen  108 DLEGPIDNLFCCAGVA  123 (331)
T ss_pred             hccCCcceEEEecCcc
Confidence            8899999999999975

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.43  E-value=2e-12  Score=84.32  Aligned_cols=80  Identities=38%  Similarity=0.463  Sum_probs=63.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      ++++|||++++||+.++++|+++|++|++++|+.+..+++.    ..         .+.++.+|++ +.+.++.+++.+.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~~---------~~~~~~~D~~-~~~~v~~~~~~~~   67 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----AL---------GAEALALDVA-DPASVAGLAWKLD   67 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----hc---------cceEEEecCC-CHHHHHHHHHHhc
Confidence            57999999999999999999999999999999876554322    11         2347899996 7888888776653


Q ss_pred             HHcCCccEEEeCCccC
Q 033624           98 EAFGRVDALVNNAGIR  113 (115)
Q Consensus        98 ~~~~~id~li~naG~~  113 (115)
                      .  +++|++|||+|..
T Consensus        68 ~--~~~d~vi~~ag~~   81 (222)
T PRK06953         68 G--EALDAAVYVAGVY   81 (222)
T ss_pred             C--CCCCEEEECCCcc
Confidence            2  4799999999985

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.41  E-value=5.3e-12  Score=82.18  Aligned_cols=80  Identities=33%  Similarity=0.577  Sum_probs=63.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      .++++|||++++||+.+++.|+++ ++|++++|+.+..+++.+..           ..+.++.+|++ +++++..+++. 
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~-----------~~~~~~~~D~~-~~~~~~~~~~~-   68 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL-----------PGATPFPVDLT-DPEAIAAAVEQ-   68 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh-----------ccceEEecCCC-CHHHHHHHHHh-
Confidence            478999999999999999999999 99999999876655443322           13567899996 78777776654 


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                         .+++|++||++|..
T Consensus        69 ---~~~id~vi~~ag~~   82 (227)
T PRK08219         69 ---LGRLDVLVHNAGVA   82 (227)
T ss_pred             ---cCCCCEEEECCCcC
Confidence               35899999999974

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.40  E-value=3.7e-12  Score=88.27  Aligned_cols=84  Identities=18%  Similarity=0.155  Sum_probs=65.5

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +.+++++|||++|+||..+++.|+++|++|++++|+........+.+..        ..++.++.+|++ +.+++..+++
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dl~-~~~~~~~~~~   72 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL--------AKKIEDHFGDIR-DAAKLRKAIA   72 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh--------cCCceEEEccCC-CHHHHHHHHh
Confidence            3578999999999999999999999999999999887654433333321        124667889996 7888877776


Q ss_pred             HHHHHcCCccEEEeCCcc
Q 033624           95 KAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~  112 (115)
                      ..     ++|++||+||.
T Consensus        73 ~~-----~~d~vih~A~~   85 (349)
T TIGR02622        73 EF-----KPEIVFHLAAQ   85 (349)
T ss_pred             hc-----CCCEEEECCcc
Confidence            53     58999999985

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.40  E-value=4.2e-12  Score=87.63  Aligned_cols=91  Identities=21%  Similarity=0.230  Sum_probs=66.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHH-HHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK-SLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      +.++++++|||++|+||..++++|+++|++|++++|+.+... ...+.+....   .....++.++.+|++ +.+.+..+
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~-d~~~~~~~   78 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDP---HPNKARMKLHYGDLS-DASSLRRW   78 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhcccc---ccccCceEEEEecCC-CHHHHHHH
Confidence            456899999999999999999999999999999988654311 1112221100   011235788999996 78888777


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++..     .+|+||||||..
T Consensus        79 ~~~~-----~~d~Vih~A~~~   94 (340)
T PLN02653         79 LDDI-----KPDEVYNLAAQS   94 (340)
T ss_pred             HHHc-----CCCEEEECCccc
Confidence            7764     589999999974

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.39  E-value=5.8e-12  Score=86.36  Aligned_cols=85  Identities=24%  Similarity=0.218  Sum_probs=63.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .+++++|||++|+||+.++++|+++|++|+++.|+..............+     ...++.++.+|++ +.+.+..+++ 
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~-d~~~~~~~~~-   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDG-----AKERLKLFKADLL-DEGSFELAID-   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccC-----CCCceEEEeCCCC-CchHHHHHHc-
Confidence            37899999999999999999999999999988888765444322222111     1135778899996 6666665553 


Q ss_pred             HHHHcCCccEEEeCCccC
Q 033624           96 AWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~  113 (115)
                            ++|++|||||..
T Consensus        77 ------~~d~vih~A~~~   88 (325)
T PLN02989         77 ------GCETVFHTASPV   88 (325)
T ss_pred             ------CCCEEEEeCCCC
Confidence                  589999999863

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.39  E-value=8.4e-12  Score=85.90  Aligned_cols=82  Identities=20%  Similarity=0.271  Sum_probs=62.4

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhC--CeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      +++++++|||++|+||..+++.|+++|  ++|++.+|+......+...+.         ..++.++.+|++ +.+.+..+
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~---------~~~~~~v~~Dl~-d~~~l~~~   71 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP---------APCLRFFIGDVR-DKERLTRA   71 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC---------CCcEEEEEccCC-CHHHHHHH
Confidence            468899999999999999999999986  689888887654433333321         135778999996 77776665


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      +.       .+|++||+||..
T Consensus        72 ~~-------~iD~Vih~Ag~~   85 (324)
T TIGR03589        72 LR-------GVDYVVHAAALK   85 (324)
T ss_pred             Hh-------cCCEEEECcccC
Confidence            43       489999999964

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.37  E-value=7.9e-12  Score=82.01  Aligned_cols=77  Identities=25%  Similarity=0.308  Sum_probs=57.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhC--CeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      ++++|||+++|||++++++|++++  +.|++..|+....      ..         ..++.++++|++ +.++++.+   
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~~---------~~~~~~~~~Dls-~~~~~~~~---   61 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------FQ---------HDNVQWHALDVT-DEAEIKQL---   61 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------cc---------cCceEEEEecCC-CHHHHHHH---
Confidence            368999999999999999999985  4555555543211      10         136778999996 77777664   


Q ss_pred             HHHHcCCccEEEeCCccCC
Q 033624           96 AWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~~  114 (115)
                       .+.++++|++|||||+..
T Consensus        62 -~~~~~~id~li~~aG~~~   79 (235)
T PRK09009         62 -SEQFTQLDWLINCVGMLH   79 (235)
T ss_pred             -HHhcCCCCEEEECCcccc
Confidence             345689999999999863

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.33  E-value=1.7e-11  Score=84.83  Aligned_cols=88  Identities=16%  Similarity=0.197  Sum_probs=62.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHH-HHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK-SLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      ++++||||+|+||..++++|++.|++|++++|+.+... .....+....  .......+.++.+|++ +.+.+..+++..
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~-d~~~l~~~~~~~   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDP--HNVNKARMKLHYGDLT-DSSNLRRIIDEI   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhcc--ccccccceeEEEeccC-CHHHHHHHHHhC
Confidence            57999999999999999999999999999998764211 1111111000  0001135788999996 788777777653


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                           ++|++||+|+..
T Consensus        78 -----~~d~ViH~Aa~~   89 (343)
T TIGR01472        78 -----KPTEIYNLAAQS   89 (343)
T ss_pred             -----CCCEEEECCccc
Confidence                 589999999974

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.33  E-value=5.4e-11  Score=75.63  Aligned_cols=82  Identities=22%  Similarity=0.319  Sum_probs=68.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      +++|||++ |+|.++++.|+++|++|++.+|+++..+.....+..        ..++.++.+|++ +++++..+++.+.+
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~--------~~~i~~~~~Dv~-d~~sv~~~i~~~l~   71 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT--------PESITPLPLDYH-DDDALKLAIKSTIE   71 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc--------CCcEEEEEccCC-CHHHHHHHHHHHHH
Confidence            58999998 777789999999999999999988776665554432        136778899995 89999999999999


Q ss_pred             HcCCccEEEeCC
Q 033624           99 AFGRVDALVNNA  110 (115)
Q Consensus        99 ~~~~id~li~na  110 (115)
                      .++++|++|+.+
T Consensus        72 ~~g~id~lv~~v   83 (177)
T PRK08309         72 KNGPFDLAVAWI   83 (177)
T ss_pred             HcCCCeEEEEec
Confidence            899999999865

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.32  E-value=3.9e-11  Score=83.31  Aligned_cols=83  Identities=18%  Similarity=0.171  Sum_probs=64.1

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      ..+++++|||++|+||..++++|+++|++|++++|+.+........+..        ..++.++.+|++ +.+.+..++.
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dl~-~~~~~~~~~~   78 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE--------GDRLRLFRADLQ-EEGSFDEAVK   78 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc--------CCeEEEEECCCC-CHHHHHHHHc
Confidence            3577899999999999999999999999999999887655544443321        135778899996 6666655443


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                             .+|++||+||..
T Consensus        79 -------~~d~Vih~A~~~   90 (353)
T PLN02896         79 -------GCDGVFHVAASM   90 (353)
T ss_pred             -------CCCEEEECCccc
Confidence                   479999999874

>PLN02240 UDP-glucose 4-epimerase

Probab=99.31  E-value=4e-11  Score=82.94  Aligned_cols=91  Identities=21%  Similarity=0.308  Sum_probs=64.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+++++|||++|+||..++++|+++|++|++++|...........+....   .....++.++.+|++ +++.+..++
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~-~~~~l~~~~   77 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELA---GDLGDNLVFHKVDLR-DKEALEKVF   77 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhh---cccCccceEEecCcC-CHHHHHHHH
Confidence            3567899999999999999999999999999998875432222111121110   000135678899996 788777776


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +..     .+|++||+||..
T Consensus        78 ~~~-----~~d~vih~a~~~   92 (352)
T PLN02240         78 AST-----RFDAVIHFAGLK   92 (352)
T ss_pred             HhC-----CCCEEEEccccC
Confidence            542     789999999864

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.30  E-value=3.8e-11  Score=82.30  Aligned_cols=85  Identities=22%  Similarity=0.221  Sum_probs=63.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .+++++|||++|+||..++++|+++|++|+++.|+.+..+.........+     ...++.++.+|++ +++.+..+++ 
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~-~~~~~~~~~~-   76 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDG-----AKERLKLFKADLL-EESSFEQAIE-   76 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccC-----CCCceEEEecCCC-CcchHHHHHh-
Confidence            57899999999999999999999999999988888765443332222111     1135778899996 6666665544 


Q ss_pred             HHHHcCCccEEEeCCccC
Q 033624           96 AWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~  113 (115)
                            .+|++||+||..
T Consensus        77 ------~~d~vih~A~~~   88 (322)
T PLN02986         77 ------GCDAVFHTASPV   88 (322)
T ss_pred             ------CCCEEEEeCCCc
Confidence                  489999999863

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.29  E-value=2.9e-11  Score=77.63  Aligned_cols=65  Identities=35%  Similarity=0.571  Sum_probs=55.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      +++|||+++|||.+++++|+++ ++|++++|+..                        .+.+|++ ++++++.++++   
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------------------~~~~D~~-~~~~~~~~~~~---   52 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------------------DVQVDIT-DPASIRALFEK---   52 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------------------ceEecCC-ChHHHHHHHHh---
Confidence            6899999999999999999999 99999887642                        3568996 78888877664   


Q ss_pred             HcCCccEEEeCCccC
Q 033624           99 AFGRVDALVNNAGIR  113 (115)
Q Consensus        99 ~~~~id~li~naG~~  113 (115)
                       ++++|++|||||+.
T Consensus        53 -~~~id~lv~~ag~~   66 (199)
T PRK07578         53 -VGKVDAVVSAAGKV   66 (199)
T ss_pred             -cCCCCEEEECCCCC
Confidence             47899999999974

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.28  E-value=5.4e-11  Score=81.35  Aligned_cols=83  Identities=20%  Similarity=0.223  Sum_probs=66.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH--HHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS--LCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .++.++|||++|.||..+++.|+++||+|..+.|+++....  ....++..       ..+...+..|++ ++.+++..+
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a-------~~~l~l~~aDL~-d~~sf~~ai   76 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGA-------KERLKLFKADLL-DEGSFDKAI   76 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccC-------cccceEEecccc-ccchHHHHH
Confidence            57899999999999999999999999999999999987544  24444322       246889999996 777777665


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +       +.|++||.|...
T Consensus        77 ~-------gcdgVfH~Asp~   89 (327)
T KOG1502|consen   77 D-------GCDGVFHTASPV   89 (327)
T ss_pred             h-------CCCEEEEeCccC
Confidence            5       479999998653

>PLN02214 cinnamoyl-CoA reductase

Probab=99.27  E-value=1.4e-10  Score=80.40  Aligned_cols=84  Identities=20%  Similarity=0.214  Sum_probs=62.6

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH-HHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS-LCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      +.+++++|||++|+||..++++|+++|++|++++|+.+.... ....+...       ..++.++.+|++ +..++..++
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~Dl~-d~~~~~~~~   79 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGG-------KERLILCKADLQ-DYEALKAAI   79 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCC-------CCcEEEEecCcC-ChHHHHHHH
Confidence            457899999999999999999999999999999987654322 12222211       124778889996 676666554


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +       .+|++||+||..
T Consensus        80 ~-------~~d~Vih~A~~~   92 (342)
T PLN02214         80 D-------GCDGVFHTASPV   92 (342)
T ss_pred             h-------cCCEEEEecCCC
Confidence            3       489999999864

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.27  E-value=1.3e-10  Score=80.22  Aligned_cols=84  Identities=15%  Similarity=0.159  Sum_probs=60.9

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +++++++|||++|+||..++++|+++|++|+++.|+.+....... +....     ...++.++.+|++ +.+.+..++.
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~-----~~~~~~~~~~Dl~-d~~~~~~~~~   79 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQ-----ELGDLKIFGADLT-DEESFEAPIA   79 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhcC-----CCCceEEEEcCCC-ChHHHHHHHh
Confidence            457899999999999999999999999999888887654433221 11110     0124778899996 6666555443


Q ss_pred             HHHHHcCCccEEEeCCcc
Q 033624           95 KAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~  112 (115)
                             ++|++||+|+.
T Consensus        80 -------~~d~vih~A~~   90 (338)
T PLN00198         80 -------GCDLVFHVATP   90 (338)
T ss_pred             -------cCCEEEEeCCC
Confidence                   57999999985

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.26  E-value=1.3e-10  Score=83.13  Aligned_cols=88  Identities=19%  Similarity=0.191  Sum_probs=62.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc---h----H---------HHHHHHhhCCCCCCCCCccceE
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD---R----L---------KSLCDEINKPGMVGSPDSVRAV   76 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~---~----~---------~~~~~~~~~~~~~~~~~~~~~~   76 (115)
                      ..+++++++||||+|+||+.++++|+++|++|+++++...   .    .         ....+.+....      ..++.
T Consensus        43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~  116 (442)
T PLN02572         43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVS------GKEIE  116 (442)
T ss_pred             ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhh------CCcce
Confidence            4567899999999999999999999999999999864211   0    0         00011111100      12477


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHHcCCccEEEeCCcc
Q 033624           77 AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        77 ~~~~di~~~~~~~~~~~~~~~~~~~~id~li~naG~  112 (115)
                      ++.+|++ +.+.+..+++..     ++|+|||+|+.
T Consensus       117 ~v~~Dl~-d~~~v~~~l~~~-----~~D~ViHlAa~  146 (442)
T PLN02572        117 LYVGDIC-DFEFLSEAFKSF-----EPDAVVHFGEQ  146 (442)
T ss_pred             EEECCCC-CHHHHHHHHHhC-----CCCEEEECCCc
Confidence            8899996 788777777653     68999999965

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.25  E-value=7.3e-11  Score=80.70  Aligned_cols=85  Identities=20%  Similarity=0.195  Sum_probs=61.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      ++++++|||++|+||..++++|+++|++|+++.|+...............     ...++.++.+|++ ++..+..+++ 
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~-~~~~~~~~~~-   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDG-----AKERLHLFKANLL-EEGSFDSVVD-   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccC-----CCCceEEEecccc-CcchHHHHHc-
Confidence            36889999999999999999999999999998887654332222111100     0135778999996 6655555443 


Q ss_pred             HHHHcCCccEEEeCCccC
Q 033624           96 AWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~  113 (115)
                            .+|++||+|+..
T Consensus        76 ------~~d~Vih~A~~~   87 (322)
T PLN02662         76 ------GCEGVFHTASPF   87 (322)
T ss_pred             ------CCCEEEEeCCcc
Confidence                  579999999853

>PLN02650 dihydroflavonol-4-reductase

Probab=99.23  E-value=1.9e-10  Score=79.83  Aligned_cols=85  Identities=20%  Similarity=0.282  Sum_probs=63.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      ..++++|||++|+||..++++|+++|++|++++|+.+........+....     ...++.++.+|++ +.+.+..+++ 
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~v~~Dl~-d~~~~~~~~~-   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPG-----ATTRLTLWKADLA-VEGSFDDAIR-   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccC-----CCCceEEEEecCC-ChhhHHHHHh-
Confidence            46789999999999999999999999999999988765544433222111     1125778899996 6666665543 


Q ss_pred             HHHHcCCccEEEeCCccC
Q 033624           96 AWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~  113 (115)
                            .+|++||+|+..
T Consensus        77 ------~~d~ViH~A~~~   88 (351)
T PLN02650         77 ------GCTGVFHVATPM   88 (351)
T ss_pred             ------CCCEEEEeCCCC
Confidence                  479999999864

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.20  E-value=1.8e-10  Score=83.28  Aligned_cols=89  Identities=24%  Similarity=0.291  Sum_probs=75.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ..+.||+++||||+|.||..+++++++.+. ++++.++++-.......+++...+     ..++.++-+|+. |.+.+..
T Consensus       246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~-----~~~~~~~igdVr-D~~~~~~  319 (588)
T COG1086         246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP-----ELKLRFYIGDVR-DRDRVER  319 (588)
T ss_pred             hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCC-----CcceEEEecccc-cHHHHHH
Confidence            356899999999999999999999999876 588889999888888888887541     357889999996 8888887


Q ss_pred             HHHHHHHHcCCccEEEeCCcc
Q 033624           92 SVQKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~  112 (115)
                      +++..     ++|+++|.|+.
T Consensus       320 ~~~~~-----kvd~VfHAAA~  335 (588)
T COG1086         320 AMEGH-----KVDIVFHAAAL  335 (588)
T ss_pred             HHhcC-----CCceEEEhhhh
Confidence            77764     79999999975

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.19  E-value=3.3e-10  Score=79.96  Aligned_cols=87  Identities=23%  Similarity=0.258  Sum_probs=64.2

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH--HHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS--LCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+++++|||++|+||+.++++|+++|++|++++|+.+....  ....+...       ...+.++.+|++ +++++..+
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~-------~~~v~~v~~Dl~-d~~~l~~~  129 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE-------LPGAEVVFGDVT-DADSLRKV  129 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh-------cCCceEEEeeCC-CHHHHHHH
Confidence            457899999999999999999999999999999998754321  11111111       124678899996 78888777


Q ss_pred             HHHHHHHcCCccEEEeCCcc
Q 033624           93 VQKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~  112 (115)
                      ++..   ..++|+||||+|.
T Consensus       130 ~~~~---~~~~D~Vi~~aa~  146 (390)
T PLN02657        130 LFSE---GDPVDVVVSCLAS  146 (390)
T ss_pred             HHHh---CCCCcEEEECCcc
Confidence            6643   1268999999874

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.18  E-value=3.2e-10  Score=78.09  Aligned_cols=83  Identities=24%  Similarity=0.390  Sum_probs=59.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      +++|||++|+||..++++|+++|++|++++|...........+....      ..++.++.+|++ +.+.+..+++.   
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dl~-d~~~~~~~~~~---   71 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLG------GKHPTFVEGDIR-NEALLTEILHD---   71 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhc------CCCceEEEccCC-CHHHHHHHHhc---
Confidence            58999999999999999999999999988765333322222222111      124667889996 77777666553   


Q ss_pred             HcCCccEEEeCCccC
Q 033624           99 AFGRVDALVNNAGIR  113 (115)
Q Consensus        99 ~~~~id~li~naG~~  113 (115)
                        .++|++||+||..
T Consensus        72 --~~~d~vvh~a~~~   84 (338)
T PRK10675         72 --HAIDTVIHFAGLK   84 (338)
T ss_pred             --CCCCEEEECCccc
Confidence              3699999999864

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.16  E-value=3.9e-10  Score=78.19  Aligned_cols=83  Identities=16%  Similarity=0.236  Sum_probs=56.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEE-EecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVA-AARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      ++++|||++|+||..+++.|+++|+.+++ +++.... ... ..+....     ...++.++.+|++ +.++++.+++. 
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~-~~~~~~~-----~~~~~~~~~~Dl~-d~~~~~~~~~~-   72 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNL-MSLAPVA-----QSERFAFEKVDIC-DRAELARVFTE-   72 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cch-hhhhhcc-----cCCceEEEECCCc-ChHHHHHHHhh-
Confidence            47999999999999999999999988554 4443221 111 1111100     0135677889996 77777777664 


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                          .++|+|||+||..
T Consensus        73 ----~~~D~Vih~A~~~   85 (355)
T PRK10217         73 ----HQPDCVMHLAAES   85 (355)
T ss_pred             ----cCCCEEEECCccc
Confidence                2689999999874

>PLN02583 cinnamoyl-CoA reductase

Probab=99.11  E-value=2e-09  Score=73.26  Aligned_cols=83  Identities=18%  Similarity=0.107  Sum_probs=57.9

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch--HHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR--LKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      -.+++++|||++|+||+.++++|+++|++|+++.|+.+.  .......+...       ..++.++.+|++ +.+.+...
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~-------~~~~~~~~~Dl~-d~~~~~~~   75 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE-------EERLKVFDVDPL-DYHSILDA   75 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC-------CCceEEEEecCC-CHHHHHHH
Confidence            347899999999999999999999999999999886432  22222222111       135778889996 66655443


Q ss_pred             HHHHHHHcCCccEEEeCCcc
Q 033624           93 VQKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~  112 (115)
                      +       ...|.+++.++.
T Consensus        76 l-------~~~d~v~~~~~~   88 (297)
T PLN02583         76 L-------KGCSGLFCCFDP   88 (297)
T ss_pred             H-------cCCCEEEEeCcc
Confidence            3       356888876543

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.10  E-value=1e-09  Score=72.92  Aligned_cols=82  Identities=27%  Similarity=0.391  Sum_probs=59.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ..++++++|||++|+||+.+++.|+++|++|+++.|+.+......   ..        ...+.++.+|+++....+    
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~--------~~~~~~~~~Dl~d~~~~l----   78 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSL---PQ--------DPSLQIVRADVTEGSDKL----   78 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhc---cc--------CCceEEEEeeCCCCHHHH----
Confidence            345789999999999999999999999999999998876543221   11        125778899996322222    


Q ss_pred             HHHHHHc-CCccEEEeCCccC
Q 033624           94 QKAWEAF-GRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~-~~id~li~naG~~  113 (115)
                         .+.. .++|++|+|+|..
T Consensus        79 ---~~~~~~~~d~vi~~~g~~   96 (251)
T PLN00141         79 ---VEAIGDDSDAVICATGFR   96 (251)
T ss_pred             ---HHHhhcCCCEEEECCCCC
Confidence               2223 3699999999864

>PLN02686 cinnamoyl-CoA reductase

Probab=99.10  E-value=1.7e-09  Score=75.71  Aligned_cols=89  Identities=17%  Similarity=0.221  Sum_probs=61.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ...+++++|||++|+||..++++|+++|++|+++.|+.+....+ ..+...+.. ......+.++.+|++ +.+++..++
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~-~~~~~~~~~v~~Dl~-d~~~l~~~i  126 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEM-GRSNDGIWTVMANLT-EPESLHEAF  126 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccc-cccCCceEEEEcCCC-CHHHHHHHH
Confidence            45689999999999999999999999999999888876554433 222111000 000124678889996 777777666


Q ss_pred             HHHHHHcCCccEEEeCCcc
Q 033624           94 QKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~  112 (115)
                      +.       +|.+||.|+.
T Consensus       127 ~~-------~d~V~hlA~~  138 (367)
T PLN02686        127 DG-------CAGVFHTSAF  138 (367)
T ss_pred             Hh-------ccEEEecCee
Confidence            53       5777777765

>PLN02427 UDP-apiose/xylose synthase

Probab=99.09  E-value=1.3e-09  Score=76.62  Aligned_cols=84  Identities=20%  Similarity=0.265  Sum_probs=59.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHh-CCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +.++++||||+|.||..+++.|+++ |++|++++|+.+........    +.  .....++.++.+|++ +...+..++.
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~----~~--~~~~~~~~~~~~Dl~-d~~~l~~~~~   85 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEP----DT--VPWSGRIQFHRINIK-HDSRLEGLIK   85 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhcc----cc--ccCCCCeEEEEcCCC-ChHHHHHHhh
Confidence            3457999999999999999999998 58999998876543322211    10  001135788999996 6666655443


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                             .+|++||+|+..
T Consensus        86 -------~~d~ViHlAa~~   97 (386)
T PLN02427         86 -------MADLTINLAAIC   97 (386)
T ss_pred             -------cCCEEEEccccc
Confidence                   379999999864

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.09  E-value=2.1e-09  Score=74.69  Aligned_cols=89  Identities=13%  Similarity=0.154  Sum_probs=61.2

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +.+++++||||+|.||..++++|+++|++|++++|...........+.....  .....++.++.+|++ +...+..+++
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Di~-d~~~l~~~~~   89 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVS--EEQWSRFIFIQGDIR-KFTDCQKACK   89 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccc--cccCCceEEEEccCC-CHHHHHHHhh
Confidence            4568999999999999999999999999999998865432222221111100  001135778999996 6655554443


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                             .+|++||.|+..
T Consensus        90 -------~~d~ViHlAa~~  101 (348)
T PRK15181         90 -------NVDYVLHQAALG  101 (348)
T ss_pred             -------CCCEEEECcccc
Confidence                   489999999863

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.09  E-value=1.5e-09  Score=73.92  Aligned_cols=81  Identities=20%  Similarity=0.277  Sum_probs=58.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      +++|||++|+||..+++.|+++|++|+++++...........+...        ..+..+.+|++ +++.+..++..   
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~D~~-~~~~~~~~~~~---   68 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI--------TRVTFVEGDLR-DRELLDRLFEE---   68 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc--------cceEEEECCCC-CHHHHHHHHHh---
Confidence            3789999999999999999999999988765433222222222110        14667889996 77777776653   


Q ss_pred             HcCCccEEEeCCccC
Q 033624           99 AFGRVDALVNNAGIR  113 (115)
Q Consensus        99 ~~~~id~li~naG~~  113 (115)
                        .++|++|||||..
T Consensus        69 --~~~d~vv~~ag~~   81 (328)
T TIGR01179        69 --HKIDAVIHFAGLI   81 (328)
T ss_pred             --CCCcEEEECcccc
Confidence              4799999999864

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.07  E-value=3.3e-10  Score=76.70  Aligned_cols=84  Identities=25%  Similarity=0.321  Sum_probs=56.9

Q ss_pred             EEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhhCCCCCCCCCcc--ceEEEEeecCCCHHHHHHHHHHH
Q 033624           20 VMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKPGMVGSPDSV--RAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +|||||+|.||..++++|++.+. +++++++++..+-.+..+++....   ....  .+..+.+|++ +.+.+..++++.
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~---~~~v~~~~~~vigDvr-d~~~l~~~~~~~   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFP---DPKVRFEIVPVIGDVR-DKERLNRIFEEY   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC-----TTCEEEEE--CTSCC-HHHHHHHHTT--
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhccc---ccCcccccCceeeccc-CHHHHHHHHhhc
Confidence            68999999999999999999875 699999999998888888853220   0112  2345578996 777777766653


Q ss_pred             HHHcCCccEEEeCCcc
Q 033624           97 WEAFGRVDALVNNAGI  112 (115)
Q Consensus        97 ~~~~~~id~li~naG~  112 (115)
                           ++|++||.|+.
T Consensus        77 -----~pdiVfHaAA~   87 (293)
T PF02719_consen   77 -----KPDIVFHAAAL   87 (293)
T ss_dssp             -----T-SEEEE----
T ss_pred             -----CCCEEEEChhc
Confidence                 79999999975

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=99.06  E-value=1.5e-09  Score=76.75  Aligned_cols=79  Identities=23%  Similarity=0.343  Sum_probs=58.6

Q ss_pred             CCCCCcEEEEecC----------------CChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceE
Q 033624           13 HDLNEKVVMVTGA----------------SSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAV   76 (115)
Q Consensus        13 ~~~~~~~~lvtG~----------------~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (115)
                      .++.|++++||||                +|.+|.++|++|+++|++|++++++.+ ..       ..        ..  
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-------~~--------~~--  245 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-------TP--------AG--  245 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-------CC--------CC--
Confidence            3578999999999                455999999999999999999987652 10       00        11  


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           77 AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        77 ~~~~di~~~~~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      ...+|++ +.+++...+.   +.++++|++|+|||+.
T Consensus       246 ~~~~dv~-~~~~~~~~v~---~~~~~~DilI~~Aav~  278 (399)
T PRK05579        246 VKRIDVE-SAQEMLDAVL---AALPQADIFIMAAAVA  278 (399)
T ss_pred             cEEEccC-CHHHHHHHHH---HhcCCCCEEEEccccc
Confidence            2356885 5666555544   4578899999999985

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.04  E-value=2e-09  Score=73.34  Aligned_cols=87  Identities=22%  Similarity=0.257  Sum_probs=65.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      ++++|||||+|.||..++.+|++.|+.|++++.-........+.+++..    ..+..+.+++.|++ |...++++|+..
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~----~~~~~v~f~~~Dl~-D~~~L~kvF~~~   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLL----GEGKSVFFVEGDLN-DAEALEKLFSEV   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhc----CCCCceEEEEeccC-CHHHHHHHHhhc
Confidence            5789999999999999999999999999999864433333333333221    11357999999996 888887777764


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                           .+|.++|-|+..
T Consensus        77 -----~fd~V~Hfa~~~   88 (343)
T KOG1371|consen   77 -----KFDAVMHFAALA   88 (343)
T ss_pred             -----CCceEEeehhhh
Confidence                 599999998764

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.03  E-value=7.1e-09  Score=67.74  Aligned_cols=76  Identities=21%  Similarity=0.312  Sum_probs=62.1

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHHH
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEA   99 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~~   99 (115)
                      ++|||++|.||..++++|+++|+.|+.+.|+..........            .++.++.+|+. +.+.++.+++..   
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~------------~~~~~~~~dl~-~~~~~~~~~~~~---   64 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK------------LNVEFVIGDLT-DKEQLEKLLEKA---   64 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH------------TTEEEEESETT-SHHHHHHHHHHH---
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc------------ceEEEEEeecc-cccccccccccc---
Confidence            68999999999999999999999988888776544332222            25788999996 888888888775   


Q ss_pred             cCCccEEEeCCccC
Q 033624          100 FGRVDALVNNAGIR  113 (115)
Q Consensus       100 ~~~id~li~naG~~  113 (115)
                        .+|.+||+||..
T Consensus        65 --~~d~vi~~a~~~   76 (236)
T PF01370_consen   65 --NIDVVIHLAAFS   76 (236)
T ss_dssp             --TESEEEEEBSSS
T ss_pred             --CceEEEEeeccc
Confidence              799999999874

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.03  E-value=2.5e-09  Score=72.29  Aligned_cols=77  Identities=23%  Similarity=0.241  Sum_probs=61.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      ++|||||+|.||..++.+|++.|+.|++++.-.....+.....            ...+++.|+. |.+.++++|++-  
T Consensus         2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~------------~~~f~~gDi~-D~~~L~~vf~~~--   66 (329)
T COG1087           2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL------------QFKFYEGDLL-DRALLTAVFEEN--   66 (329)
T ss_pred             eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc------------cCceEEeccc-cHHHHHHHHHhc--
Confidence            6899999999999999999999999999997655444333321            1568999996 888777777763  


Q ss_pred             HcCCccEEEeCCccC
Q 033624           99 AFGRVDALVNNAGIR  113 (115)
Q Consensus        99 ~~~~id~li~naG~~  113 (115)
                         +||.+||.||..
T Consensus        67 ---~idaViHFAa~~   78 (329)
T COG1087          67 ---KIDAVVHFAASI   78 (329)
T ss_pred             ---CCCEEEECcccc
Confidence               899999999853

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.03  E-value=3.3e-09  Score=72.06  Aligned_cols=81  Identities=16%  Similarity=0.172  Sum_probs=57.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHhC--CeEEEEecccch-HHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDR-LKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      +++|||++|+||..++++|++.|  ++|++++|.... .....+.+..        ..++.++.+|++ +++++..+++.
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~Dl~-~~~~~~~~~~~   71 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED--------NPRYRFVKGDIG-DRELVSRLFTE   71 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc--------CCCcEEEEcCCc-CHHHHHHHHhh
Confidence            47999999999999999999987  678887764221 1111111211        124677889996 78887777654


Q ss_pred             HHHHcCCccEEEeCCccC
Q 033624           96 AWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~  113 (115)
                      .     ++|++||+||..
T Consensus        72 ~-----~~d~vi~~a~~~   84 (317)
T TIGR01181        72 H-----QPDAVVHFAAES   84 (317)
T ss_pred             c-----CCCEEEEccccc
Confidence            2     589999999864

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.00  E-value=5e-09  Score=71.91  Aligned_cols=73  Identities=21%  Similarity=0.271  Sum_probs=56.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      +++|||++|.+|+.++++|+++|++|++++|+.+....    +..         ..+.++.+|++ +++++..+++    
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~~---------~~v~~v~~Dl~-d~~~l~~al~----   63 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LKE---------WGAELVYGDLS-LPETLPPSFK----   63 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hhh---------cCCEEEECCCC-CHHHHHHHHC----
Confidence            58999999999999999999999999999998654321    111         23678889996 6666554443    


Q ss_pred             HcCCccEEEeCCcc
Q 033624           99 AFGRVDALVNNAGI  112 (115)
Q Consensus        99 ~~~~id~li~naG~  112 (115)
                         .+|++||+++.
T Consensus        64 ---g~d~Vi~~~~~   74 (317)
T CHL00194         64 ---GVTAIIDASTS   74 (317)
T ss_pred             ---CCCEEEECCCC
Confidence               57999998764

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.00  E-value=6.2e-09  Score=72.14  Aligned_cols=80  Identities=23%  Similarity=0.343  Sum_probs=56.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCe-EEEEeccc--chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCR-IVAAARRV--DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~-v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      +++|||++|+||..++++|+++|+. |+.+++..  ...+... .+..        ..++.++.+|++ +.++++.+++.
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~Dl~-d~~~~~~~~~~   71 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DVSD--------SERYVFEHADIC-DRAELDRIFAQ   71 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hccc--------CCceEEEEecCC-CHHHHHHHHHh
Confidence            5899999999999999999999986 44455432  1111111 1110        134677899996 78888777765


Q ss_pred             HHHHcCCccEEEeCCccC
Q 033624           96 AWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~  113 (115)
                           ..+|++||+||..
T Consensus        72 -----~~~d~vih~A~~~   84 (352)
T PRK10084         72 -----HQPDAVMHLAAES   84 (352)
T ss_pred             -----cCCCEEEECCccc
Confidence                 2699999999864

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.00  E-value=9.7e-09  Score=65.02  Aligned_cols=71  Identities=21%  Similarity=0.373  Sum_probs=59.1

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHHH
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEA   99 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~~   99 (115)
                      ++|+|++|.+|+.++++|+++|++|+++.|++++.+.      .         ..+..+.+|+. +++++...+.     
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~------~---------~~~~~~~~d~~-d~~~~~~al~-----   59 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED------S---------PGVEIIQGDLF-DPDSVKAALK-----   59 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH------C---------TTEEEEESCTT-CHHHHHHHHT-----
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc------c---------cccccceeeeh-hhhhhhhhhh-----
Confidence            6899999999999999999999999999999987765      1         46889999995 7765555443     


Q ss_pred             cCCccEEEeCCccC
Q 033624          100 FGRVDALVNNAGIR  113 (115)
Q Consensus       100 ~~~id~li~naG~~  113 (115)
                        +.|++|+++|..
T Consensus        60 --~~d~vi~~~~~~   71 (183)
T PF13460_consen   60 --GADAVIHAAGPP   71 (183)
T ss_dssp             --TSSEEEECCHST
T ss_pred             --hcchhhhhhhhh
Confidence              689999998753

...

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=98.99  E-value=2.7e-09  Score=72.95  Aligned_cols=73  Identities=25%  Similarity=0.262  Sum_probs=57.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      +++|||++|+||..+++.|+++|++|++++|+.+....    +.         ...+.++.+|++ +.+++..+++    
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~---------~~~~~~~~~D~~-~~~~l~~~~~----   63 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN----LE---------GLDVEIVEGDLR-DPASLRKAVA----   63 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc----cc---------cCCceEEEeeCC-CHHHHHHHHh----
Confidence            68999999999999999999999999999998654321    11         124678899996 6766655543    


Q ss_pred             HcCCccEEEeCCcc
Q 033624           99 AFGRVDALVNNAGI  112 (115)
Q Consensus        99 ~~~~id~li~naG~  112 (115)
                         .+|++||+|+.
T Consensus        64 ---~~d~vi~~a~~   74 (328)
T TIGR03466        64 ---GCRALFHVAAD   74 (328)
T ss_pred             ---CCCEEEEecee
Confidence               57999999975

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.99  E-value=5.4e-09  Score=71.15  Aligned_cols=83  Identities=20%  Similarity=0.300  Sum_probs=59.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCe-EEEEeccc---chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRV---DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATI   89 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~-v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~   89 (115)
                      .+.+++++|+|+ ||+|++++..|++.|++ |.++.|+.   ++.+++.+.+...+       ..+....+|+. +.+.+
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~-------~~~~~~~~d~~-~~~~~  193 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEV-------PECIVNVYDLN-DTEKL  193 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcC-------CCceeEEechh-hhhHH
Confidence            457899999999 69999999999999996 99999987   56666666664332       23344556774 44444


Q ss_pred             HHHHHHHHHHcCCccEEEeCCcc
Q 033624           90 EISVQKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        90 ~~~~~~~~~~~~~id~li~naG~  112 (115)
                      ...+       ...|+||||..+
T Consensus       194 ~~~~-------~~~DilINaTp~  209 (289)
T PRK12548        194 KAEI-------ASSDILVNATLV  209 (289)
T ss_pred             Hhhh-------ccCCEEEEeCCC
Confidence            3322       245999999743

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.97  E-value=5.2e-09  Score=69.00  Aligned_cols=76  Identities=14%  Similarity=0.173  Sum_probs=57.8

Q ss_pred             cEEEEec-CCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           18 KVVMVTG-ASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        18 ~~~lvtG-~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      .+=.||. +++|||+++|++|+++|++|+++++..        .+...        .   ...+|++ +.+++..+++.+
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~--------~l~~~--------~---~~~~Dv~-d~~s~~~l~~~v   74 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKR--------ALKPE--------P---HPNLSIR-EIETTKDLLITL   74 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChh--------hcccc--------c---CCcceee-cHHHHHHHHHHH
Confidence            3444555 468999999999999999999987521        11100        0   1347885 788999999999


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                      .+.++++|++|||||+.
T Consensus        75 ~~~~g~iDiLVnnAgv~   91 (227)
T TIGR02114        75 KELVQEHDILIHSMAVS   91 (227)
T ss_pred             HHHcCCCCEEEECCEec
Confidence            89999999999999975

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=98.91  E-value=1.3e-08  Score=70.54  Aligned_cols=77  Identities=19%  Similarity=0.275  Sum_probs=54.7

Q ss_pred             cEEEEecCCChHHHHHHHHHHHh-CCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      ++++|||++|.||..+++.|++. |++|++++|+......    +..        ...+.++.+|++++...+..++   
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~~~--------~~~~~~~~~Dl~~~~~~~~~~~---   66 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----LVN--------HPRMHFFEGDITINKEWIEYHV---   66 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----hcc--------CCCeEEEeCCCCCCHHHHHHHH---
Confidence            36999999999999999999986 6899999886543221    111        1247788899963444443322   


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                          .++|++||+|+..
T Consensus        67 ----~~~d~ViH~aa~~   79 (347)
T PRK11908         67 ----KKCDVILPLVAIA   79 (347)
T ss_pred             ----cCCCEEEECcccC
Confidence                2589999999864

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.90  E-value=6.6e-10  Score=72.35  Aligned_cols=91  Identities=19%  Similarity=0.196  Sum_probs=61.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .++++++||+++|||..++..+...+-......++....+  .+.+....      +........|++ ....+..+++.
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~------gd~~v~~~g~~~-e~~~l~al~e~   75 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAY------GDDFVHVVGDIT-EEQLLGALREA   75 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEe------cCCcceechHHH-HHHHHHHHHhh
Confidence            4789999999999999888888776655444333332222  11111110      123344556775 66667778888


Q ss_pred             HHHHcCCccEEEeCCccCCC
Q 033624           96 AWEAFGRVDALVNNAGIRGN  115 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~~~  115 (115)
                      .++..++.|++|||||..++
T Consensus        76 ~r~k~gkr~iiI~NAG~lgd   95 (253)
T KOG1204|consen   76 PRKKGGKRDIIIHNAGSLGD   95 (253)
T ss_pred             hhhcCCceeEEEecCCCccc
Confidence            88888999999999999875

>TIGR01746 Thioester-redct thioester reductase domain

Probab=98.87  E-value=2.6e-08  Score=68.83  Aligned_cols=91  Identities=18%  Similarity=0.258  Sum_probs=56.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHhC--CeEEEEecccchH---HHHHHHhhCCCCCCCCCc-cceEEEEeecCCCHHH-H-H
Q 033624           19 VVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRL---KSLCDEINKPGMVGSPDS-VRAVAVELDVCADGAT-I-E   90 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~di~~~~~~-~-~   90 (115)
                      +++|||++|+||..++++|+++|  ++|+++.|+.+..   +.+.+.++.......... .++.++.+|++ ++.. + .
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~gl~~   79 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLS-EPRLGLSD   79 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcC-cccCCcCH
Confidence            47999999999999999999998  7799999876532   233333322110000001 36888899985 3210 0 0


Q ss_pred             HHHHHHHHHcCCccEEEeCCccC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~  113 (115)
                      ..+..+   ...+|++||||+..
T Consensus        80 ~~~~~~---~~~~d~vih~a~~~   99 (367)
T TIGR01746        80 AEWERL---AENVDTIVHNGALV   99 (367)
T ss_pred             HHHHHH---HhhCCEEEeCCcEe
Confidence            111222   24689999999864

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.87  E-value=4.9e-08  Score=62.79  Aligned_cols=82  Identities=21%  Similarity=0.345  Sum_probs=60.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+++++|+|++|++|+.+++.|+++|++|++++|+.++.+...+.+....        ......+|.. +.+++...+
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~--------~~~~~~~~~~-~~~~~~~~~   95 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF--------GEGVGAVETS-DDAARAAAI   95 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc--------CCcEEEeeCC-CHHHHHHHH
Confidence            5678999999999999999999999999999999999888887777665321        1223345663 555544443


Q ss_pred             HHHHHHcCCccEEEeCCc
Q 033624           94 QKAWEAFGRVDALVNNAG  111 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG  111 (115)
                      .       +.|++|+++.
T Consensus        96 ~-------~~diVi~at~  106 (194)
T cd01078          96 K-------GADVVFAAGA  106 (194)
T ss_pred             h-------cCCEEEECCC
Confidence            2       4688888754

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=98.85  E-value=2.1e-08  Score=75.10  Aligned_cols=79  Identities=16%  Similarity=0.200  Sum_probs=56.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHh-CCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      .+++++|||++|.||..++++|++. |++|++++|.......    +..        ...+.++.+|+++....++.++ 
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~~--------~~~~~~~~gDl~d~~~~l~~~l-  380 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----FLG--------HPRFHFVEGDISIHSEWIEYHI-  380 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----hcC--------CCceEEEeccccCcHHHHHHHh-
Confidence            4678999999999999999999985 7999999987643221    111        1246778899973232223222 


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                            ..+|++||+||..
T Consensus       381 ------~~~D~ViHlAa~~  393 (660)
T PRK08125        381 ------KKCDVVLPLVAIA  393 (660)
T ss_pred             ------cCCCEEEECcccc
Confidence                  2589999999864

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.85  E-value=3.8e-08  Score=73.71  Aligned_cols=83  Identities=18%  Similarity=0.218  Sum_probs=58.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHh--CCeEEEEeccc--chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKA--GCRIVAAARRV--DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~--g~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ..++++||||+|.||..++++|+++  +++|+++++..  +....... ..        ...++.++.+|++ +.+.+..
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~-~~--------~~~~v~~~~~Dl~-d~~~~~~   74 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNP-SK--------SSPNFKFVKGDIA-SADLVNY   74 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhh-cc--------cCCCeEEEECCCC-ChHHHHH
Confidence            4678999999999999999999988  67888888742  12211111 00        0135778899996 6665554


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      ++..     .++|++||+|+..
T Consensus        75 ~~~~-----~~~D~ViHlAa~~   91 (668)
T PLN02260         75 LLIT-----EGIDTIMHFAAQT   91 (668)
T ss_pred             HHhh-----cCCCEEEECCCcc
Confidence            4322     3799999999874

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=98.84  E-value=1.6e-08  Score=68.61  Aligned_cols=75  Identities=21%  Similarity=0.258  Sum_probs=55.0

Q ss_pred             EEecCCChHHHHHHHHHHHhC--CeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           21 MVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        21 lvtG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      |||||+|.+|..++++|+++|  ++|.+.+++.....  ...+...        ....++.+|++ +.+++..+++    
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~~--------~~~~~~~~Di~-d~~~l~~a~~----   65 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQKS--------GVKEYIQGDIT-DPESLEEALE----   65 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhcc--------cceeEEEeccc-cHHHHHHHhc----
Confidence            699999999999999999999  68888887654322  1111111        12338999996 7777776655    


Q ss_pred             HcCCccEEEeCCccC
Q 033624           99 AFGRVDALVNNAGIR  113 (115)
Q Consensus        99 ~~~~id~li~naG~~  113 (115)
                         ..|++||+|+..
T Consensus        66 ---g~d~V~H~Aa~~   77 (280)
T PF01073_consen   66 ---GVDVVFHTAAPV   77 (280)
T ss_pred             ---CCceEEEeCccc
Confidence               579999999864

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=98.82  E-value=3.6e-08  Score=69.18  Aligned_cols=80  Identities=15%  Similarity=0.067  Sum_probs=56.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      +.-.+++++|||++|.||..+++.|.++|++|++++|.....      +...       .....++.+|++ +...+..+
T Consensus        17 ~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~~~~-------~~~~~~~~~Dl~-d~~~~~~~   82 (370)
T PLN02695         17 WPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------MSED-------MFCHEFHLVDLR-VMENCLKV   82 (370)
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------cccc-------cccceEEECCCC-CHHHHHHH
Confidence            344678999999999999999999999999999999864321      0000       012456778996 55544433


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      +       ..+|++||+|+..
T Consensus        83 ~-------~~~D~Vih~Aa~~   96 (370)
T PLN02695         83 T-------KGVDHVFNLAADM   96 (370)
T ss_pred             H-------hCCCEEEEccccc
Confidence            3       2579999999753

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=98.80  E-value=2.7e-08  Score=67.84  Aligned_cols=64  Identities=23%  Similarity=0.296  Sum_probs=50.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      ++||||++|.||..++++|.++| +|++++|...                        .+..|++ +.+.+.++++..  
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------------------~~~~Dl~-d~~~~~~~~~~~--   53 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST------------------------DYCGDFS-NPEGVAETVRKI--   53 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc------------------------cccCCCC-CHHHHHHHHHhc--
Confidence            59999999999999999999999 7887776421                        1236885 777777666642  


Q ss_pred             HcCCccEEEeCCccC
Q 033624           99 AFGRVDALVNNAGIR  113 (115)
Q Consensus        99 ~~~~id~li~naG~~  113 (115)
                         ++|++||+|+..
T Consensus        54 ---~~D~Vih~Aa~~   65 (299)
T PRK09987         54 ---RPDVIVNAAAHT   65 (299)
T ss_pred             ---CCCEEEECCccC
Confidence               589999999875

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=98.79  E-value=4.4e-08  Score=66.77  Aligned_cols=76  Identities=18%  Similarity=0.313  Sum_probs=48.8

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH-
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE-   98 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~-   98 (115)
                      ++||||+|.||+.++++|++.|+.++++.++.+...... .                ...+|+. +..+.+.+++.+.. 
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~~-~----------------~~~~~~~-d~~~~~~~~~~~~~~   63 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV-N----------------LVDLDIA-DYMDKEDFLAQIMAG   63 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHHH-h----------------hhhhhhh-hhhhHHHHHHHHhcc
Confidence            799999999999999999999997766655543211100 0                1224553 43344444444432 


Q ss_pred             -HcCCccEEEeCCccC
Q 033624           99 -AFGRVDALVNNAGIR  113 (115)
Q Consensus        99 -~~~~id~li~naG~~  113 (115)
                       .++++|++||+||..
T Consensus        64 ~~~~~~d~Vih~A~~~   79 (308)
T PRK11150         64 DDFGDIEAIFHEGACS   79 (308)
T ss_pred             cccCCccEEEECceec
Confidence             235799999999853

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.79  E-value=5e-08  Score=68.90  Aligned_cols=78  Identities=23%  Similarity=0.356  Sum_probs=57.3

Q ss_pred             CCCCcEEEEecC---------------CCh-HHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEE
Q 033624           14 DLNEKVVMVTGA---------------SSG-LGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA   77 (115)
Q Consensus        14 ~~~~~~~lvtG~---------------~~g-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (115)
                      ++.|++++||||               ++| +|.++|+++..+|++|+++.++.+..         .     +  ..  .
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---------~-----~--~~--~  243 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---------T-----P--PG--V  243 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---------C-----C--CC--c
Confidence            478999999999               556 99999999999999999987654321         0     0  11  2


Q ss_pred             EEeecCCCHHHH-HHHHHHHHHHcCCccEEEeCCccC
Q 033624           78 VELDVCADGATI-EISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        78 ~~~di~~~~~~~-~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      ..+|+. +.+++ +.++++   .++.+|++|+|||+.
T Consensus       244 ~~~~v~-~~~~~~~~~~~~---~~~~~D~~i~~Aavs  276 (390)
T TIGR00521       244 KSIKVS-TAEEMLEAALNE---LAKDFDIFISAAAVA  276 (390)
T ss_pred             EEEEec-cHHHHHHHHHHh---hcccCCEEEEccccc
Confidence            446775 56666 555534   356899999999985

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK05865 hypothetical protein; Provisional

Probab=98.75  E-value=8.5e-08  Score=73.30  Aligned_cols=71  Identities=28%  Similarity=0.342  Sum_probs=56.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      +++|||++|+||..++++|+++|++|++++|+....      +.          ..+.++.+|++ +.+.+..+++    
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~~----------~~v~~v~gDL~-D~~~l~~al~----   60 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------WP----------SSADFIAADIR-DATAVESAMT----   60 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------cc----------cCceEEEeeCC-CHHHHHHHHh----
Confidence            589999999999999999999999999999874321      10          23667889996 7766665553    


Q ss_pred             HcCCccEEEeCCccC
Q 033624           99 AFGRVDALVNNAGIR  113 (115)
Q Consensus        99 ~~~~id~li~naG~~  113 (115)
                         .+|++||+|+..
T Consensus        61 ---~vD~VVHlAa~~   72 (854)
T PRK05865         61 ---GADVVAHCAWVR   72 (854)
T ss_pred             ---CCCEEEECCCcc
Confidence               489999999864

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=98.74  E-value=5.4e-08  Score=65.60  Aligned_cols=61  Identities=34%  Similarity=0.518  Sum_probs=48.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      +++|||++|+||..++++|.++|++|+++.|+                            .+|+. +.+.+..+++..  
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------------------~~d~~-~~~~~~~~~~~~--   49 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS----------------------------QLDLT-DPEALERLLRAI--   49 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------------------ccCCC-CHHHHHHHHHhC--
Confidence            37999999999999999999999999988764                            24664 666666665542  


Q ss_pred             HcCCccEEEeCCccC
Q 033624           99 AFGRVDALVNNAGIR  113 (115)
Q Consensus        99 ~~~~id~li~naG~~  113 (115)
                         ++|++||+||..
T Consensus        50 ---~~d~vi~~a~~~   61 (287)
T TIGR01214        50 ---RPDAVVNTAAYT   61 (287)
T ss_pred             ---CCCEEEECCccc
Confidence               579999998864

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.70  E-value=4.7e-08  Score=66.00  Aligned_cols=76  Identities=16%  Similarity=0.157  Sum_probs=55.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      +++|||++|.+|+.++++|++.|++|.+.+|+++...       .         ..+..+.+|+. +++++...++.. +
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-------~---------~~~~~~~~d~~-d~~~l~~a~~~~-~   62 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-------G---------PNEKHVKFDWL-DEDTWDNPFSSD-D   62 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-------C---------CCCccccccCC-CHHHHHHHHhcc-c
Confidence            3799999999999999999999999999999876431       0         12334567884 777777766532 2


Q ss_pred             HcCC-ccEEEeCCcc
Q 033624           99 AFGR-VDALVNNAGI  112 (115)
Q Consensus        99 ~~~~-id~li~naG~  112 (115)
                      .... +|.++++++.
T Consensus        63 ~~~g~~d~v~~~~~~   77 (285)
T TIGR03649        63 GMEPEISAVYLVAPP   77 (285)
T ss_pred             CcCCceeEEEEeCCC
Confidence            2334 7888877664

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN02206 UDP-glucuronate decarboxylase

Probab=98.69  E-value=1.3e-07  Score=67.93  Aligned_cols=76  Identities=16%  Similarity=0.154  Sum_probs=53.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchH-HHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRL-KSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      .+++++|||++|.||..++++|+++|++|+++++..... +.....+.         ..++.++..|+. ++.     + 
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~---------~~~~~~i~~D~~-~~~-----l-  181 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFS---------NPNFELIRHDVV-EPI-----L-  181 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhcc---------CCceEEEECCcc-Chh-----h-
Confidence            468899999999999999999999999999988753321 11111111         124667778885 331     1 


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                            ..+|+|||+|+..
T Consensus       182 ------~~~D~ViHlAa~~  194 (442)
T PLN02206        182 ------LEVDQIYHLACPA  194 (442)
T ss_pred             ------cCCCEEEEeeeec
Confidence                  2589999999854

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=98.65  E-value=2.3e-07  Score=66.57  Aligned_cols=76  Identities=17%  Similarity=0.126  Sum_probs=52.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      ..+++|||++|.||..++++|+++|++|++++|...........+..        ..++.++..|+. +..         
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~--------~~~~~~~~~Di~-~~~---------  181 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFG--------NPRFELIRHDVV-EPI---------  181 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhcc--------CCceEEEECccc-ccc---------
Confidence            46899999999999999999999999999998764321111111111        124667778875 321         


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                         ..++|+|||+|+..
T Consensus       182 ---~~~~D~ViHlAa~~  195 (436)
T PLN02166        182 ---LLEVDQIYHLACPA  195 (436)
T ss_pred             ---ccCCCEEEECceec
Confidence               12589999999853

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=98.63  E-value=2.2e-07  Score=63.22  Aligned_cols=76  Identities=16%  Similarity=0.286  Sum_probs=50.2

Q ss_pred             EEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           20 VMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      ++|||++|.||..+++.|.++|+ .|++++|..... .. ..+            ....+..|+. +.+.++.+.+.   
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~------------~~~~~~~d~~-~~~~~~~~~~~---   62 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF-LNL------------ADLVIADYID-KEDFLDRLEKG---   62 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh-hhh------------hheeeeccCc-chhHHHHHHhh---
Confidence            58999999999999999999998 687777654321 11 111            0123445663 55544443332   


Q ss_pred             HcCCccEEEeCCccC
Q 033624           99 AFGRVDALVNNAGIR  113 (115)
Q Consensus        99 ~~~~id~li~naG~~  113 (115)
                      .+.++|++||+||..
T Consensus        63 ~~~~~D~vvh~A~~~   77 (314)
T TIGR02197        63 AFGKIEAIFHQGACS   77 (314)
T ss_pred             ccCCCCEEEECcccc
Confidence            345899999999864

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=98.62  E-value=1.4e-07  Score=64.19  Aligned_cols=61  Identities=26%  Similarity=0.452  Sum_probs=45.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      +++|||++|.||.++.+.|.++|+.|+.+.|+                            .+|++ +.+.+..++.+.  
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------------------~~dl~-d~~~~~~~~~~~--   50 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS----------------------------DLDLT-DPEAVAKLLEAF--   50 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------------------CS-TT-SHHHHHHHHHHH--
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------------------hcCCC-CHHHHHHHHHHh--
Confidence            68999999999999999999999999888655                            35775 777777777765  


Q ss_pred             HcCCccEEEeCCccC
Q 033624           99 AFGRVDALVNNAGIR  113 (115)
Q Consensus        99 ~~~~id~li~naG~~  113 (115)
                         ++|++||+||+.
T Consensus        51 ---~pd~Vin~aa~~   62 (286)
T PF04321_consen   51 ---KPDVVINCAAYT   62 (286)
T ss_dssp             -----SEEEE-----
T ss_pred             ---CCCeEeccceee
Confidence               689999999874

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.61  E-value=1.5e-07  Score=63.88  Aligned_cols=74  Identities=24%  Similarity=0.290  Sum_probs=53.7

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHHH
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEA   99 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~~   99 (115)
                      ++|||++|.||..++++|.++|++|+.++|.........              ..+.++.+|++ +..........    
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------------~~~~~~~~d~~-~~~~~~~~~~~----   63 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--------------SGVEFVVLDLT-DRDLVDELAKG----   63 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc--------------cccceeeeccc-chHHHHHHHhc----
Confidence            899999999999999999999999999998765443211              13567778885 44333332222    


Q ss_pred             cCCccEEEeCCccCC
Q 033624          100 FGRVDALVNNAGIRG  114 (115)
Q Consensus       100 ~~~id~li~naG~~~  114 (115)
                      ..  |.+||+|+...
T Consensus        64 ~~--d~vih~aa~~~   76 (314)
T COG0451          64 VP--DAVIHLAAQSS   76 (314)
T ss_pred             CC--CEEEEccccCc
Confidence            11  99999998753

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=98.61  E-value=1.8e-07  Score=62.29  Aligned_cols=88  Identities=23%  Similarity=0.256  Sum_probs=46.3

Q ss_pred             EecCCChHHHHHHHHHHHhCC--eEEEEecccch---HHHHHHHhhCCCCCCCC---CccceEEEEeecCCCHH-HH-HH
Q 033624           22 VTGASSGLGREFCLDLAKAGC--RIVAAARRVDR---LKSLCDEINKPGMVGSP---DSVRAVAVELDVCADGA-TI-EI   91 (115)
Q Consensus        22 vtG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~di~~~~~-~~-~~   91 (115)
                      |||++|.+|..+..+|++++.  +|++..|..+.   .+.+.+.+.+.+.....   ...++.++.+|++ .+. -+ ..
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~-~~~lGL~~~   79 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLS-QPNLGLSDE   79 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TT-SGGGG--HH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEecccc-ccccCCChH
Confidence            799999999999999999886  89999987643   23333333322100000   1358999999997 421 11 11


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      .++++.   ..+|++||||+..
T Consensus        80 ~~~~L~---~~v~~IiH~Aa~v   98 (249)
T PF07993_consen   80 DYQELA---EEVDVIIHCAASV   98 (249)
T ss_dssp             HHHHHH---HH--EEEE--SS-
T ss_pred             Hhhccc---cccceeeecchhh
Confidence            122221   2579999999864

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK09620 hypothetical protein; Provisional

Probab=98.55  E-value=1.9e-07  Score=61.69  Aligned_cols=36  Identities=19%  Similarity=0.365  Sum_probs=31.8

Q ss_pred             CCCcEEEEecCC----------------ChHHHHHHHHHHHhCCeEEEEecc
Q 033624           15 LNEKVVMVTGAS----------------SGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        15 ~~~~~~lvtG~~----------------~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      +.|++++||+|.                |.+|..+|++|+++|+.|+++++.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~   52 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGY   52 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            368999999886                889999999999999999988754

>PRK07201 short chain dehydrogenase; Provisional

Probab=98.54  E-value=9.2e-07  Score=66.00  Aligned_cols=83  Identities=23%  Similarity=0.277  Sum_probs=54.7

Q ss_pred             EEEEecCCChHHHHHHHHHH--HhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHH-H-HHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLA--KAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGAT-I-EISVQ   94 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~--~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~-~-~~~~~   94 (115)
                      +++|||++|.||..+++.|+  ..|++|++++|+... ...........      ..++..+.+|++ ++.. . ...++
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~~------~~~v~~~~~Dl~-~~~~~~~~~~~~   73 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYWG------ADRVVPLVGDLT-EPGLGLSEADIA   73 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhcC------CCcEEEEecccC-CccCCcCHHHHH
Confidence            59999999999999999999  578999999996432 22222111111      135778889996 4211 0 11122


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                      .+    ..+|++||+||..
T Consensus        74 ~l----~~~D~Vih~Aa~~   88 (657)
T PRK07201         74 EL----GDIDHVVHLAAIY   88 (657)
T ss_pred             Hh----cCCCEEEECceee
Confidence            22    4789999999864

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.54  E-value=1.1e-06  Score=57.79  Aligned_cols=75  Identities=27%  Similarity=0.336  Sum_probs=53.9

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHHH
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEA   99 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~~   99 (115)
                      ++|+|++|.+|+.+++.|++.+++|.++.|+...  +..+.++..+         +..+.+|.. +.+++.+++      
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~g---------~~vv~~d~~-~~~~l~~al------   62 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQALG---------AEVVEADYD-DPESLVAAL------   62 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHTT---------TEEEES-TT--HHHHHHHH------
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhccc---------ceEeecccC-CHHHHHHHH------
Confidence            6899999999999999999999999999998732  2233344332         345688884 666555544      


Q ss_pred             cCCccEEEeCCccC
Q 033624          100 FGRVDALVNNAGIR  113 (115)
Q Consensus       100 ~~~id~li~naG~~  113 (115)
                       ..+|.+|++.+..
T Consensus        63 -~g~d~v~~~~~~~   75 (233)
T PF05368_consen   63 -KGVDAVFSVTPPS   75 (233)
T ss_dssp             -TTCSEEEEESSCS
T ss_pred             -cCCceEEeecCcc
Confidence             3689999887743

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.53  E-value=7.9e-07  Score=62.66  Aligned_cols=77  Identities=22%  Similarity=0.349  Sum_probs=61.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhC-CeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +.++|.|+ |++|+.+|..|++++ .+|.+.+|+.++..++.....          .++.+.++|+. +.+.+.+++.+ 
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~----------~~v~~~~vD~~-d~~al~~li~~-   68 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIG----------GKVEALQVDAA-DVDALVALIKD-   68 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhcc----------ccceeEEeccc-ChHHHHHHHhc-
Confidence            46888888 999999999999999 799999999998887766532          37889999995 76666665554 


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                            .|++||++...
T Consensus        69 ------~d~VIn~~p~~   79 (389)
T COG1748          69 ------FDLVINAAPPF   79 (389)
T ss_pred             ------CCEEEEeCCch
Confidence                  39999998643

>PRK12320 hypothetical protein; Provisional

Probab=98.50  E-value=8.4e-07  Score=66.74  Aligned_cols=70  Identities=21%  Similarity=0.283  Sum_probs=52.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      +++|||++|.||..++++|.++|++|++++|.....       .         ...+.++.+|++ +.. +.    ++  
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~-------~---------~~~ve~v~~Dl~-d~~-l~----~a--   57 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA-------L---------DPRVDYVCASLR-NPV-LQ----EL--   57 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc-------c---------cCCceEEEccCC-CHH-HH----HH--
Confidence            589999999999999999999999999999764320       0         124667889996 542 22    22  


Q ss_pred             HcCCccEEEeCCccC
Q 033624           99 AFGRVDALVNNAGIR  113 (115)
Q Consensus        99 ~~~~id~li~naG~~  113 (115)
                       ...+|++||+|++.
T Consensus        58 -l~~~D~VIHLAa~~   71 (699)
T PRK12320         58 -AGEADAVIHLAPVD   71 (699)
T ss_pred             -hcCCCEEEEcCccC
Confidence             23689999999864

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=98.49  E-value=2.4e-07  Score=62.91  Aligned_cols=59  Identities=20%  Similarity=0.232  Sum_probs=45.5

Q ss_pred             EEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHHHc
Q 033624           21 MVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAF  100 (115)
Q Consensus        21 lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~~~  100 (115)
                      +||||+|.||..+++.|++.|++|+++.+.                           ..+|++ +.++++.+++..    
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~---------------------------~~~Dl~-~~~~l~~~~~~~----   48 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH---------------------------KELDLT-RQADVEAFFAKE----   48 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc---------------------------ccCCCC-CHHHHHHHHhcc----
Confidence            689999999999999999999987765321                           126885 677666665542    


Q ss_pred             CCccEEEeCCcc
Q 033624          101 GRVDALVNNAGI  112 (115)
Q Consensus       101 ~~id~li~naG~  112 (115)
                       ++|++||+|+.
T Consensus        49 -~~d~Vih~A~~   59 (306)
T PLN02725         49 -KPTYVILAAAK   59 (306)
T ss_pred             -CCCEEEEeeee
Confidence             57999999976

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.49  E-value=8.7e-07  Score=60.17  Aligned_cols=81  Identities=22%  Similarity=0.322  Sum_probs=57.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCC--eEEEEecc--cchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGC--RIVAAARR--VDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      +++|||||+|+||..+++.+.++.-  +|+.++.=  ....+.+ ..+..        ..+..+++.||+ +.+.+..++
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l-~~~~~--------~~~~~fv~~DI~-D~~~v~~~~   70 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENL-ADVED--------SPRYRFVQGDIC-DRELVDRLF   70 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHH-Hhhhc--------CCCceEEecccc-CHHHHHHHH
Confidence            3689999999999999999998754  46666542  1222232 22322        247899999997 787777776


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      .+.     .+|+++|-|+-+
T Consensus        71 ~~~-----~~D~VvhfAAES   85 (340)
T COG1088          71 KEY-----QPDAVVHFAAES   85 (340)
T ss_pred             Hhc-----CCCeEEEechhc
Confidence            653     789999998754

>PLN02503 fatty acyl-CoA reductase 2

Probab=98.49  E-value=2.3e-06  Score=63.63  Aligned_cols=92  Identities=21%  Similarity=0.252  Sum_probs=57.6

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCC---eEEEEecccch---HHHHHHHh---------hCCCCCC--CCCccceEE
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGC---RIVAAARRVDR---LKSLCDEI---------NKPGMVG--SPDSVRAVA   77 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~---~v~~~~r~~~~---~~~~~~~~---------~~~~~~~--~~~~~~~~~   77 (115)
                      +.+++++|||++|.||..+++.|++.+.   +|++..|....   .+.+.+++         ++.....  .....++.+
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            4689999999999999999999998653   57888775432   22221122         1110000  001247889


Q ss_pred             EEeecCCC-----HHHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           78 VELDVCAD-----GATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        78 ~~~di~~~-----~~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      +..|+++.     ++..+.+.       ..+|++||+|+..
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~-------~~vDiVIH~AA~v  230 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIA-------KEVDVIINSAANT  230 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHH-------hcCCEEEECcccc
Confidence            99999732     12222221       2589999999864

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.49  E-value=1.4e-06  Score=62.50  Aligned_cols=78  Identities=26%  Similarity=0.322  Sum_probs=56.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc-chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ++.+++++|+|+++ +|.++|+.|++.|++|.+++++. +..++..+.+...         .+..+..|.. +       
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~---------~~~~~~~~~~-~-------   63 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL---------GIELVLGEYP-E-------   63 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc---------CCEEEeCCcc-h-------
Confidence            35789999999866 99999999999999999999875 3344444445432         2345666653 2       


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                           ...+.+|++|+++|+..
T Consensus        64 -----~~~~~~d~vv~~~g~~~   80 (450)
T PRK14106         64 -----EFLEGVDLVVVSPGVPL   80 (450)
T ss_pred             -----hHhhcCCEEEECCCCCC
Confidence                 12346899999999743

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.49  E-value=1.4e-06  Score=53.06  Aligned_cols=78  Identities=32%  Similarity=0.435  Sum_probs=57.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCe-EEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .++.+++++|.|+ ||.|++++..|...|++ |.++.|+.++.+++.+.+..         ..+..+..+-   .   . 
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~---------~~~~~~~~~~---~---~-   70 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGG---------VNIEAIPLED---L---E-   70 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTG---------CSEEEEEGGG---H---C-
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCc---------cccceeeHHH---H---H-
Confidence            3678999999998 99999999999999997 99999999999988888732         2243443321   1   1 


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                            ......|++|++.+..
T Consensus        71 ------~~~~~~DivI~aT~~~   86 (135)
T PF01488_consen   71 ------EALQEADIVINATPSG   86 (135)
T ss_dssp             ------HHHHTESEEEE-SSTT
T ss_pred             ------HHHhhCCeEEEecCCC
Confidence                  1123679999997754

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.46  E-value=1e-06  Score=62.15  Aligned_cols=75  Identities=27%  Similarity=0.415  Sum_probs=54.9

Q ss_pred             EEEecCCChHHHHHHHHHHHhCC--eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           20 VMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      ++|.|+ |.+|+.+++.|++++-  +|++.+|+.+++++..+.+.         ..++....+|+. +.+++..++.   
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~---------~~~~~~~~~d~~-~~~~l~~~~~---   66 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLL---------GDRVEAVQVDVN-DPESLAELLR---   66 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--T---------TTTEEEEE--TT-THHHHHHHHT---
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhcc---------ccceeEEEEecC-CHHHHHHHHh---
Confidence            689999 9999999999999874  79999999998887776542         257889999995 7766666544   


Q ss_pred             HHcCCccEEEeCCcc
Q 033624           98 EAFGRVDALVNNAGI  112 (115)
Q Consensus        98 ~~~~~id~li~naG~  112 (115)
                          ..|++||++|-
T Consensus        67 ----~~dvVin~~gp   77 (386)
T PF03435_consen   67 ----GCDVVINCAGP   77 (386)
T ss_dssp             ----TSSEEEE-SSG
T ss_pred             ----cCCEEEECCcc
Confidence                34999999985

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PLN02778 3,5-epimerase/4-reductase

Probab=98.44  E-value=2.2e-06  Score=58.63  Aligned_cols=30  Identities=10%  Similarity=0.059  Sum_probs=27.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEE
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVA   46 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~   46 (115)
                      .++++|||++|.||..+++.|+++|++|++
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~   38 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHY   38 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEE
Confidence            467999999999999999999999998864

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.42  E-value=2.6e-06  Score=56.33  Aligned_cols=77  Identities=13%  Similarity=0.166  Sum_probs=48.0

Q ss_pred             cEEEEecCC-ChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           18 KVVMVTGAS-SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        18 ~~~lvtG~~-~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      .+=.||..+ |++|.++|++|+++|++|++++|+...        ....      ...+.++.++.   ...+   .+.+
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~--------~~~~------~~~v~~i~v~s---~~~m---~~~l   75 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAV--------KPEP------HPNLSIIEIEN---VDDL---LETL   75 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccc--------cCCC------CCCeEEEEEec---HHHH---HHHH
Confidence            356677655 559999999999999999998875321        0000      11344444432   2222   2233


Q ss_pred             HHHcCCccEEEeCCccCC
Q 033624           97 WEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        97 ~~~~~~id~li~naG~~~  114 (115)
                      .+.++.+|++|||||+..
T Consensus        76 ~~~~~~~DivIh~AAvsd   93 (229)
T PRK06732         76 EPLVKDHDVLIHSMAVSD   93 (229)
T ss_pred             HHHhcCCCEEEeCCccCC
Confidence            334467899999999853

>PLN00016 RNA-binding protein; Provisional

Probab=98.40  E-value=1.4e-06  Score=61.29  Aligned_cols=78  Identities=23%  Similarity=0.303  Sum_probs=53.1

Q ss_pred             CCcEEEEe----cCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH-------HHhhCCCCCCCCCccceEEEEeecCC
Q 033624           16 NEKVVMVT----GASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC-------DEINKPGMVGSPDSVRAVAVELDVCA   84 (115)
Q Consensus        16 ~~~~~lvt----G~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~di~~   84 (115)
                      ..++++||    |++|.||..+++.|+++|++|++++|+........       ..+..         ..+.++.+|+. 
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~---------~~v~~v~~D~~-  120 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS---------AGVKTVWGDPA-  120 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh---------cCceEEEecHH-
Confidence            45789999    99999999999999999999999999865432111       11111         12567777774 


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEeCCc
Q 033624           85 DGATIEISVQKAWEAFGRVDALVNNAG  111 (115)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~id~li~naG  111 (115)
                      +   +..++     ....+|++|+++|
T Consensus       121 d---~~~~~-----~~~~~d~Vi~~~~  139 (378)
T PLN00016        121 D---VKSKV-----AGAGFDVVYDNNG  139 (378)
T ss_pred             H---HHhhh-----ccCCccEEEeCCC
Confidence            2   22222     1236888888875

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=98.39  E-value=9e-07  Score=59.59  Aligned_cols=35  Identities=23%  Similarity=0.391  Sum_probs=31.9

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecccchH
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRL   54 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   54 (115)
                      ++|||++|.||..+++.|+++|++|++++|+.+..
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   35 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAG   35 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCC
Confidence            58999999999999999999999999999987643

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=98.39  E-value=5.8e-07  Score=59.45  Aligned_cols=59  Identities=31%  Similarity=0.405  Sum_probs=46.6

Q ss_pred             HHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHHHcCCccEEEeCCcc
Q 033624           33 FCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        33 ~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~~~~~id~li~naG~  112 (115)
                      +|+.|+++|++|++++|+.+...     +             ..++++|++ +.++++.+++++.   +++|+||||||+
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~-------------~~~~~~Dl~-~~~~v~~~~~~~~---~~iD~li~nAG~   58 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-----L-------------DGFIQADLG-DPASIDAAVAALP---GRIDALFNIAGV   58 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-----h-------------hHhhcccCC-CHHHHHHHHHHhc---CCCeEEEECCCC
Confidence            47889999999999999876531     0             124679996 8889998888763   689999999997


Q ss_pred             C
Q 033624          113 R  113 (115)
Q Consensus       113 ~  113 (115)
                      .
T Consensus        59 ~   59 (241)
T PRK12428         59 P   59 (241)
T ss_pred             C
Confidence            5

>PLN02996 fatty acyl-CoA reductase

Probab=98.36  E-value=9.9e-06  Score=59.06  Aligned_cols=92  Identities=25%  Similarity=0.240  Sum_probs=56.0

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCC---eEEEEecccch---HHHHHHHh---------hCCCCCC--CCCccceEE
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGC---RIVAAARRVDR---LKSLCDEI---------NKPGMVG--SPDSVRAVA   77 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~---~v~~~~r~~~~---~~~~~~~~---------~~~~~~~--~~~~~~~~~   77 (115)
                      +.+++++|||++|.||..+++.|++.+.   +|++..|....   .+.+...+         ++..+..  .....++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            5689999999999999999999997642   57777776431   11211111         1100000  000146889


Q ss_pred             EEeecCC------CHHHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           78 VELDVCA------DGATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        78 ~~~di~~------~~~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      +..|++.      +.+.++.++       ..+|++||+|+..
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~-------~~vD~ViH~AA~v  123 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMW-------KEIDIVVNLAATT  123 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHH-------hCCCEEEECcccc
Confidence            9999962      122222222       2589999999864

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.36  E-value=1.9e-06  Score=58.34  Aligned_cols=88  Identities=17%  Similarity=0.165  Sum_probs=65.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +|++||||-+|--|.-+++.|++.|+.|..+.|..+......-.+...+   .....++..+.+|++ |...+.++++++
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~---~~~~~~l~l~~gDLt-D~~~l~r~l~~v   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDP---HLNDPRLHLHYGDLT-DSSNLLRILEEV   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceecccc---ccCCceeEEEecccc-chHHHHHHHHhc
Confidence            6899999999999999999999999999999887544332111221111   122345889999997 888888888876


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                           ++|-+.|.|+-+
T Consensus        78 -----~PdEIYNLaAQS   89 (345)
T COG1089          78 -----QPDEIYNLAAQS   89 (345)
T ss_pred             -----Cchhheeccccc
Confidence                 678888777643

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.36  E-value=6.6e-07  Score=60.11  Aligned_cols=36  Identities=25%  Similarity=0.504  Sum_probs=33.0

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecccchHH
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK   55 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   55 (115)
                      ++|||++|.||++++.+|.+.|.+|+++.|++...+
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~   36 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKAS   36 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchh
Confidence            589999999999999999999999999999987654

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=98.29  E-value=5.1e-06  Score=58.11  Aligned_cols=80  Identities=23%  Similarity=0.221  Sum_probs=53.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhC--CeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+++||||+|.+|+.+++.|.+++  .++.+++..+.......+....       ...++..+.+|+. +...+..  
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~-------~~~~v~~~~~D~~-~~~~i~~--   72 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF-------RSGRVTVILGDLL-DANSISN--   72 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc-------cCCceeEEecchh-hhhhhhh--
Confidence            57799999999999999999999998  6788888766421111111110       1357888899996 5444433  


Q ss_pred             HHHHHHcCCccEEEeCCc
Q 033624           94 QKAWEAFGRVDALVNNAG  111 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG  111 (115)
                           .+... .++|+|+
T Consensus        73 -----a~~~~-~Vvh~aa   84 (361)
T KOG1430|consen   73 -----AFQGA-VVVHCAA   84 (361)
T ss_pred             -----hccCc-eEEEecc
Confidence                 33445 5555554

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.27  E-value=7.4e-06  Score=57.03  Aligned_cols=48  Identities=33%  Similarity=0.575  Sum_probs=39.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHh-C-CeEEEEecccchHHHHHHHh
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKA-G-CRIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~-g-~~v~~~~r~~~~~~~~~~~~   61 (115)
                      ++.+++++|||++|.||..++++|+++ | .+++++.|+.+++..+..++
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el  201 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAEL  201 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHh
Confidence            577899999999999999999999864 5 47889999877666655443

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=98.25  E-value=4.8e-06  Score=56.40  Aligned_cols=59  Identities=27%  Similarity=0.468  Sum_probs=49.1

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHHH
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEA   99 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~~   99 (115)
                      +||||++|-+|.++++.|. .++.|+.+++..                            +|++ +.+.+..++.+.   
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------------------~Dit-d~~~v~~~i~~~---   49 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE----------------------------LDIT-DPDAVLEVIRET---   49 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------------------cccc-ChHHHHHHHHhh---
Confidence            8999999999999999998 667888765432                            6886 788888888875   


Q ss_pred             cCCccEEEeCCccC
Q 033624          100 FGRVDALVNNAGIR  113 (115)
Q Consensus       100 ~~~id~li~naG~~  113 (115)
                        ++|++||+|++.
T Consensus        50 --~PDvVIn~AAyt   61 (281)
T COG1091          50 --RPDVVINAAAYT   61 (281)
T ss_pred             --CCCEEEECcccc
Confidence              899999999874

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.18  E-value=1.2e-05  Score=54.64  Aligned_cols=84  Identities=24%  Similarity=0.307  Sum_probs=64.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ....|.++-|-|++|.+|+.++..|++.|.+|++-.|..+---   ..++-.+     +=+++.++..|+. |+++++++
T Consensus        57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~---r~lkvmG-----dLGQvl~~~fd~~-DedSIr~v  127 (391)
T KOG2865|consen   57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDP---RHLKVMG-----DLGQVLFMKFDLR-DEDSIRAV  127 (391)
T ss_pred             ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccch---hheeecc-----cccceeeeccCCC-CHHHHHHH
Confidence            3456889999999999999999999999999999888654322   1222222     2257889999996 89999988


Q ss_pred             HHHHHHHcCCccEEEeCCcc
Q 033624           93 VQKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~  112 (115)
                      +..       -+++||..|-
T Consensus       128 vk~-------sNVVINLIGr  140 (391)
T KOG2865|consen  128 VKH-------SNVVINLIGR  140 (391)
T ss_pred             HHh-------CcEEEEeecc
Confidence            765       3888887764

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.18  E-value=1.7e-05  Score=52.83  Aligned_cols=71  Identities=24%  Similarity=0.286  Sum_probs=52.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      .++|||++|.+|..++++|.++|++|.+..|+.+......              ..+.....|+. ++.++...++    
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~--------------~~v~~~~~d~~-~~~~l~~a~~----   62 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA--------------GGVEVVLGDLR-DPKSLVAGAK----   62 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc--------------CCcEEEEeccC-CHhHHHHHhc----
Confidence            5899999999999999999999999999999988766544              13556667774 5554444333    


Q ss_pred             HcCCccEEEeCCc
Q 033624           99 AFGRVDALVNNAG  111 (115)
Q Consensus        99 ~~~~id~li~naG  111 (115)
                         .++.+++..+
T Consensus        63 ---G~~~~~~i~~   72 (275)
T COG0702          63 ---GVDGVLLISG   72 (275)
T ss_pred             ---cccEEEEEec
Confidence               4566555544

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.17  E-value=1.9e-05  Score=56.69  Aligned_cols=47  Identities=19%  Similarity=0.169  Sum_probs=37.5

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhh
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~   62 (115)
                      +.+++++|||+++ +|.++|+.|++.|++|++.+++........+.+.
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~   49 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELL   49 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHH
Confidence            5689999999965 9999999999999999999877644333444444

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.14  E-value=1.1e-05  Score=56.43  Aligned_cols=94  Identities=20%  Similarity=0.227  Sum_probs=56.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHh-CCeEEEEecccc---hHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVD---RLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~-g~~v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      +++++||++|.+|.-+..+|+.+ .++|++..|-.+   ...++.+.+....--......++..+..|+....-.+.  .
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~--~   78 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLS--E   78 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCC--H
Confidence            47899999999999888888865 468998887554   23334444431100001124678889888851110111  1


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      .+...-...+|.+|||++..
T Consensus        79 ~~~~~La~~vD~I~H~gA~V   98 (382)
T COG3320          79 RTWQELAENVDLIIHNAALV   98 (382)
T ss_pred             HHHHHHhhhcceEEecchhh
Confidence            11112223689999999864

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=98.13  E-value=3.2e-05  Score=52.52  Aligned_cols=48  Identities=31%  Similarity=0.498  Sum_probs=42.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhC-CeEEEEecccchHHHHHHHhh
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~   62 (115)
                      .+.+++++|+|+ ||+|++++..|...| .+|+++.|+.++.+++.+.+.
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            467899999997 899999999999999 689999999888877777664

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=98.11  E-value=3.9e-05  Score=51.84  Aligned_cols=48  Identities=29%  Similarity=0.563  Sum_probs=41.4

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhC
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINK   63 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~   63 (115)
                      ..+++++|+|+ ||+|++++..|++.|++|.+++|+.++.+++.+.+..
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~  162 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQR  162 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhh
Confidence            45789999998 6999999999999999999999998888777776643

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=98.09  E-value=7.5e-05  Score=47.92  Aligned_cols=77  Identities=14%  Similarity=0.243  Sum_probs=44.4

Q ss_pred             CCCcEEEEecCC----------------ChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEE
Q 033624           15 LNEKVVMVTGAS----------------SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAV   78 (115)
Q Consensus        15 ~~~~~~lvtG~~----------------~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (115)
                      +.|+++|||+|.                |-.|.++|+.+..+|+.|+++..+.+ ...               +..+..+
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~---------------p~~~~~i   64 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP---------------PPGVKVI   64 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS--------------------TTEEEE
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc---------------cccceEE
Confidence            357777777764                56899999999999999998876632 110               1234444


Q ss_pred             EeecCCCHHHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           79 ELDVCADGATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        79 ~~di~~~~~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .++   ..+++..   .+...++.-|++|++|++.
T Consensus        65 ~v~---sa~em~~---~~~~~~~~~Di~I~aAAVs   93 (185)
T PF04127_consen   65 RVE---SAEEMLE---AVKELLPSADIIIMAAAVS   93 (185)
T ss_dssp             E-S---SHHHHHH---HHHHHGGGGSEEEE-SB--
T ss_pred             Eec---chhhhhh---hhccccCcceeEEEecchh
Confidence            442   3334443   3334445559999999985

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.05  E-value=4.2e-05  Score=57.59  Aligned_cols=60  Identities=13%  Similarity=0.161  Sum_probs=43.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      ..+++|||++|.||+.+++.|.++|++|....                               .|++ +...+...+.+.
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~~-------------------------------~~l~-d~~~v~~~i~~~  427 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYGK-------------------------------GRLE-DRSSLLADIRNV  427 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEeec-------------------------------cccc-cHHHHHHHHHhh
Confidence            35799999999999999999999998773210                               2343 555555555442


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                           ++|++||+|+..
T Consensus       428 -----~pd~Vih~Aa~~  439 (668)
T PLN02260        428 -----KPTHVFNAAGVT  439 (668)
T ss_pred             -----CCCEEEECCccc
Confidence                 689999999865

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.03  E-value=4.2e-05  Score=53.34  Aligned_cols=84  Identities=19%  Similarity=0.246  Sum_probs=66.9

Q ss_pred             EEEEecCCChHHHHHHHHHHH----hCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAK----AGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      -++|-|++|.-|.-+++++..    .+.++.+.+|+.+++++..+.+.+....  .-+..+ .+.+|.+ +++++.+.+.
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~--~ls~~~-i~i~D~~-n~~Sl~emak   82 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGT--DLSSSV-ILIADSA-NEASLDEMAK   82 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCC--Ccccce-EEEecCC-CHHHHHHHHh
Confidence            478999999999999999998    7888999999999999988887765411  112334 7889995 8999888777


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                      +.       .+++||+|-.
T Consensus        83 ~~-------~vivN~vGPy   94 (423)
T KOG2733|consen   83 QA-------RVIVNCVGPY   94 (423)
T ss_pred             hh-------EEEEeccccc
Confidence            64       7999999853

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=97.97  E-value=3.6e-05  Score=61.93  Aligned_cols=93  Identities=19%  Similarity=0.169  Sum_probs=57.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhC----CeEEEEecccchHH---HHHHHhhCCCCCCCCCccceEEEEeecCCCHHH-
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAG----CRIVAAARRVDRLK---SLCDEINKPGMVGSPDSVRAVAVELDVCADGAT-   88 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g----~~v~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~-   88 (115)
                      .++++|||++|.+|..+++.|++++    ++|+...|+.....   .+...+...+........++.++.+|++ ++.- 
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~-~~~lg 1049 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLS-KEKFG 1049 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCC-CccCC
Confidence            5789999999999999999999887    67888888754322   2222222111000011236888899985 3210 


Q ss_pred             H-HHHHHHHHHHcCCccEEEeCCccC
Q 033624           89 I-EISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        89 ~-~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      + ...++++   ...+|++||||+..
T Consensus      1050 l~~~~~~~l---~~~~d~iiH~Aa~~ 1072 (1389)
T TIGR03443      1050 LSDEKWSDL---TNEVDVIIHNGALV 1072 (1389)
T ss_pred             cCHHHHHHH---HhcCCEEEECCcEe
Confidence            0 1112222   23689999999864

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.96  E-value=0.00016  Score=49.31  Aligned_cols=49  Identities=29%  Similarity=0.365  Sum_probs=42.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhhC
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINK   63 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~   63 (115)
                      ...+++++|.|+ ||.|++++..|+..|+ +|.+++|+.++.+.+.+.+..
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~  173 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNA  173 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHh
Confidence            356789999998 8899999999999998 699999999988888887754

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.91  E-value=0.00014  Score=44.89  Aligned_cols=48  Identities=31%  Similarity=0.576  Sum_probs=40.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhC-CeEEEEecccchHHHHHHHhh
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~   62 (115)
                      .+.+++++|+|+ +++|..+++.|.+.| ..|.+++|+.+..++..+.+.
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~   64 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFG   64 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh
Confidence            356789999998 899999999999986 679999999887777666654

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK06849 hypothetical protein; Provisional

Probab=97.79  E-value=0.00078  Score=47.74  Aligned_cols=39  Identities=26%  Similarity=0.299  Sum_probs=34.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRL   54 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   54 (115)
                      +.+++||||++..+|..+++.|.+.|++|++++.++...
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~   41 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPL   41 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH
Confidence            357899999999999999999999999999998876544

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=97.77  E-value=9.3e-05  Score=50.34  Aligned_cols=41  Identities=15%  Similarity=0.263  Sum_probs=35.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR   53 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   53 (115)
                      +..++.+++||||+|.||..++..|..+|..|++++.-...
T Consensus        23 ~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg   63 (350)
T KOG1429|consen   23 KPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTG   63 (350)
T ss_pred             cCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEeccccc
Confidence            44568999999999999999999999999999998865433

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.77  E-value=0.00034  Score=47.68  Aligned_cols=47  Identities=32%  Similarity=0.323  Sum_probs=40.7

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhh
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~   62 (115)
                      +.+++++|.|+ ||.+++++..|++.|+ +|.++.|+.++.+++.+.+.
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~  170 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV  170 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence            56889999987 9999999999999997 69999999988888777664

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=97.73  E-value=0.00017  Score=52.11  Aligned_cols=94  Identities=19%  Similarity=0.228  Sum_probs=56.2

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhC---CeEEEEecccc---hHH--------HHHHHhhCCCCCCCCCccceEEEEe
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAG---CRIVAAARRVD---RLK--------SLCDEINKPGMVGSPDSVRAVAVEL   80 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g---~~v~~~~r~~~---~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~   80 (115)
                      +.+|+++||||+|++|+.+.+.|++.-   -++.+.-|...   ..+        .+.+.+++..   .+.-.++..+.+
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~---p~~l~Kv~pi~G   86 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKK---PEALEKVVPIAG   86 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhC---ccceecceeccc
Confidence            569999999999999999999999753   25666666431   111        2222333221   112246788888


Q ss_pred             ecCCCHHHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           81 DVCADGATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        81 di~~~~~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      |++.+.--+...-.+  .-...+|++||+|+..
T Consensus        87 Di~~~~LGis~~D~~--~l~~eV~ivih~AAtv  117 (467)
T KOG1221|consen   87 DISEPDLGISESDLR--TLADEVNIVIHSAATV  117 (467)
T ss_pred             cccCcccCCChHHHH--HHHhcCCEEEEeeeee
Confidence            886332222211111  1223789999999853

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.70  E-value=0.0004  Score=47.38  Aligned_cols=50  Identities=34%  Similarity=0.535  Sum_probs=44.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhhCC
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKP   64 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~   64 (115)
                      +..++.++|.|+ ||.+++++..|++.|+ ++.++.|+.++.+++.+.+...
T Consensus       123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~  173 (283)
T COG0169         123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGEL  173 (283)
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhc
Confidence            446899999998 8899999999999996 6999999999999988888754

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.69  E-value=0.00013  Score=53.71  Aligned_cols=47  Identities=34%  Similarity=0.586  Sum_probs=40.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHh
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~   61 (115)
                      .+.+++++|+|+ ||+|++++..|++.|++|+++.|+.++.+.+.+.+
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            467899999999 69999999999999999999999887777766554

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.64  E-value=0.00037  Score=49.97  Aligned_cols=48  Identities=17%  Similarity=0.351  Sum_probs=40.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHh
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~   61 (115)
                      ..+.+++++|.|+ |++|+.++..|...|+ ++.++.|+.++.+.+.+.+
T Consensus       177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~  225 (414)
T PRK13940        177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF  225 (414)
T ss_pred             cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh
Confidence            3577999999999 9999999999999996 6889999988777766654

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=97.63  E-value=0.00053  Score=50.01  Aligned_cols=47  Identities=26%  Similarity=0.428  Sum_probs=39.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHh
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~   61 (115)
                      .+.+++++|+|+ ||+|++++..|.+.|++|.+++|+.++.++..+.+
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~  375 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC  375 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            456889999996 79999999999999999999999877766655443

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.62  E-value=0.00042  Score=51.69  Aligned_cols=82  Identities=15%  Similarity=0.215  Sum_probs=57.8

Q ss_pred             CCCCcEEEEecCC-ChHHHHHHHHHHHhCCeEEEEecccch-HHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           14 DLNEKVVMVTGAS-SGLGREFCLDLAKAGCRIVAAARRVDR-LKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        14 ~~~~~~~lvtG~~-~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ....++++|||++ +.|+.+++..|+..|++|+++..+.++ ..+..+.|=.   +....+.....+.+++. ...+++.
T Consensus       393 ~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa---~~a~~ga~LwvVpaN~~-SysDVdA  468 (866)
T COG4982         393 TYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYA---RHARYGAALWVVPANMG-SYSDVDA  468 (866)
T ss_pred             CcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHH---hhCCCCceEEEEecccc-chhhHHH
Confidence            3457899999987 679999999999999999998765443 2223332221   11223456778888885 7889999


Q ss_pred             HHHHHHHH
Q 033624           92 SVQKAWEA   99 (115)
Q Consensus        92 ~~~~~~~~   99 (115)
                      +++.+-..
T Consensus       469 lIewIg~e  476 (866)
T COG4982         469 LIEWIGDE  476 (866)
T ss_pred             HHHHhccc
Confidence            98876543

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.60  E-value=0.00088  Score=46.33  Aligned_cols=44  Identities=23%  Similarity=0.337  Sum_probs=36.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      .|.+++|+|+++++|..+++.....|++|+++.++.++.+.+.+
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~  194 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKN  194 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            47899999999999999998888899999988888766554433

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.58  E-value=0.0014  Score=45.83  Aligned_cols=36  Identities=33%  Similarity=0.536  Sum_probs=31.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecc
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   50 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~   50 (115)
                      .+.+++++|.|+ ||+|..+++.|++.|. ++.+++++
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D   57 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRD   57 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            466889999998 8899999999999997 78888876

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.56  E-value=0.0012  Score=45.09  Aligned_cols=47  Identities=28%  Similarity=0.428  Sum_probs=40.7

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhh
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~   62 (115)
                      ..+++++|.|+ ||-+++++..|++.|+ ++.++.|+.++.+++.+.+.
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~  172 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVIN  172 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh
Confidence            45789999998 8999999999999997 58899999988888877765

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=97.56  E-value=0.0003  Score=55.98  Aligned_cols=91  Identities=20%  Similarity=0.290  Sum_probs=66.5

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCe-EEEEecccchHH---HHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLK---SLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      ...+.++|+||-||.|+.++.+|.++|++ +++.+|+.-+.-   .....++..+       .++..-..|++ ..+..+
T Consensus      1766 hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~G-------VqV~vsT~nit-t~~ga~ 1837 (2376)
T KOG1202|consen 1766 HPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRG-------VQVQVSTSNIT-TAEGAR 1837 (2376)
T ss_pred             CccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcC-------eEEEEecccch-hhhhHH
Confidence            45789999999999999999999999996 677788754332   2345555543       55555556775 566677


Q ss_pred             HHHHHHHHHcCCccEEEeCCccCC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      .++++. .+.+.+-.+||.|.++.
T Consensus      1838 ~Li~~s-~kl~~vGGiFnLA~VLR 1860 (2376)
T KOG1202|consen 1838 GLIEES-NKLGPVGGIFNLAAVLR 1860 (2376)
T ss_pred             HHHHHh-hhcccccchhhHHHHHH
Confidence            777764 55778888898887653

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.53  E-value=0.00044  Score=47.99  Aligned_cols=77  Identities=23%  Similarity=0.274  Sum_probs=59.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      ...++|-|++|..|.-++++|++.|.+..+.+|+..++..+...+-.          ....+.+.   .+..++..++  
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~----------~~~~~p~~---~p~~~~~~~~--   70 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGP----------EAAVFPLG---VPAALEAMAS--   70 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCc----------cccccCCC---CHHHHHHHHh--
Confidence            45689999999999999999999999999999999999888877643          23344443   2444444433  


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                           +.++|+||+|-.
T Consensus        71 -----~~~VVlncvGPy   82 (382)
T COG3268          71 -----RTQVVLNCVGPY   82 (382)
T ss_pred             -----cceEEEeccccc
Confidence                 569999999854

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.53  E-value=0.00042  Score=44.96  Aligned_cols=47  Identities=19%  Similarity=0.337  Sum_probs=40.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE   60 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   60 (115)
                      .++.|+++.|+|. |.+|..+++.|.+.|++|++++++.+..+...+.
T Consensus        24 ~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          24 DSLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            4578999999999 4899999999999999999999988776665554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.51  E-value=0.0014  Score=44.83  Aligned_cols=80  Identities=24%  Similarity=0.288  Sum_probs=53.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .+..++|+|+++++|.++++.+...|++|++++++.++.+.+. .+   +       ..   ...|.. +....+.+.+.
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~---~-------~~---~~~~~~-~~~~~~~~~~~  230 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-EL---G-------AD---YVIDYR-KEDFVREVREL  230 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc---C-------CC---eEEecC-ChHHHHHHHHH
Confidence            4789999999999999999999999999999988876655432 21   1       11   112442 33333333322


Q ss_pred             HHHHcCCccEEEeCCcc
Q 033624           96 AWEAFGRVDALVNNAGI  112 (115)
Q Consensus        96 ~~~~~~~id~li~naG~  112 (115)
                      . . ...+|++++++|.
T Consensus       231 ~-~-~~~~d~~i~~~g~  245 (342)
T cd08266         231 T-G-KRGVDVVVEHVGA  245 (342)
T ss_pred             h-C-CCCCcEEEECCcH
Confidence            2 1 2368999999874

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.50  E-value=0.0014  Score=45.80  Aligned_cols=43  Identities=23%  Similarity=0.312  Sum_probs=36.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      .|.+++|+|+++++|..+++.....|++|++++++.++.+.+.
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~  200 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLK  200 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence            4789999999999999999888888999998887776655443

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.49  E-value=0.001  Score=45.52  Aligned_cols=42  Identities=24%  Similarity=0.345  Sum_probs=36.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK   55 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   55 (115)
                      ..+.|++++|.|. |++|+.+++.|...|++|.++.|+.+...
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~  188 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLA  188 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            3678999999999 77999999999999999999999876543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.48  E-value=0.0022  Score=45.41  Aligned_cols=44  Identities=18%  Similarity=0.241  Sum_probs=36.4

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      +.+..++|.|+ |.+|+..++.+...|++|++++++.++.+.+..
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~  208 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDA  208 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Confidence            45677888887 789999999999999999999998876655443

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.47  E-value=0.0012  Score=45.55  Aligned_cols=42  Identities=21%  Similarity=0.280  Sum_probs=35.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCD   59 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~   59 (115)
                      .+++|+|+++++|..+++.....|+ +|++++++.++.+.+.+
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~  198 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKS  198 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence            7999999999999999888888898 79998888776555444

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.46  E-value=0.00081  Score=43.11  Aligned_cols=38  Identities=24%  Similarity=0.379  Sum_probs=34.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      ++-|.|++|-.|..++++...+|..|+.+.|++++...
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~   39 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAA   39 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccc
Confidence            57789999999999999999999999999999887643

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.46  E-value=0.0011  Score=45.36  Aligned_cols=41  Identities=32%  Similarity=0.471  Sum_probs=35.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      .+.+++|+|+++++|..+++.+...|++|+++.++.+..+.
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~  202 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKI  202 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence            47789999999999999999999999999988877655443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.45  E-value=0.0016  Score=44.71  Aligned_cols=42  Identities=26%  Similarity=0.395  Sum_probs=35.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      .|.+++|+|+++++|..+++.....|++|+++.++.++.+.+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~  179 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL  179 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            478999999999999999888888899999888877665544

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.45  E-value=0.003  Score=41.02  Aligned_cols=36  Identities=39%  Similarity=0.497  Sum_probs=31.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecc
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   50 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~   50 (115)
                      .+.+++++|.|. ||+|..+++.|+..|. ++.+++.+
T Consensus        18 kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        18 RLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             HhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence            466888999986 8999999999999997 78888876

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.43  E-value=0.0024  Score=44.46  Aligned_cols=39  Identities=26%  Similarity=0.411  Sum_probs=32.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK   55 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   55 (115)
                      |.++||+|+++|+|...++.....|++++++..+.++.+
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~  181 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE  181 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH
Confidence            899999999999999999888889988777766665554

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.39  E-value=0.004  Score=42.68  Aligned_cols=48  Identities=23%  Similarity=0.338  Sum_probs=37.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccc---hHHHHHHHhh
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVD---RLKSLCDEIN   62 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~---~~~~~~~~~~   62 (115)
                      .+.+++++|.|+ ||-+++++..|+..|+ +|.++.|+.+   +.+++.+.+.
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~  172 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN  172 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence            456889999998 7779999999999997 6889999854   5556655553

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.38  E-value=0.0011  Score=44.67  Aligned_cols=72  Identities=17%  Similarity=0.246  Sum_probs=47.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      +++|+||++- |+.+++.|.+.|++|++..++....+....    .         ....+..+.. +.+++..++.+   
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~----~---------g~~~v~~g~l-~~~~l~~~l~~---   63 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI----H---------QALTVHTGAL-DPQELREFLKR---   63 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc----c---------CCceEEECCC-CHHHHHHHHHh---
Confidence            5899999887 999999999999999998887754332211    0         0112334443 45555555543   


Q ss_pred             HcCCccEEEeCC
Q 033624           99 AFGRVDALVNNA  110 (115)
Q Consensus        99 ~~~~id~li~na  110 (115)
                        .++|++|..+
T Consensus        64 --~~i~~VIDAt   73 (256)
T TIGR00715        64 --HSIDILVDAT   73 (256)
T ss_pred             --cCCCEEEEcC
Confidence              2688888765

This enzyme was found to be a monomer by gel filtration.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.38  E-value=0.0036  Score=42.24  Aligned_cols=42  Identities=24%  Similarity=0.419  Sum_probs=36.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      .+.+++|+|+++++|..+++.+...|++|++++++.+..+.+
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC  180 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            478999999999999999999999999999988876655443

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.36  E-value=0.0044  Score=45.24  Aligned_cols=77  Identities=16%  Similarity=0.237  Sum_probs=50.9

Q ss_pred             CCCCcEEEEecCC----------------ChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEE
Q 033624           14 DLNEKVVMVTGAS----------------SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA   77 (115)
Q Consensus        14 ~~~~~~~lvtG~~----------------~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (115)
                      ++.|++++||+|.                |-.|.++|+.+..+|++|.++.-...        +..        +..+..
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~--------~~~--------p~~v~~  316 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD--------LAD--------PQGVKV  316 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC--------CCC--------CCCceE
Confidence            5889999999885                45799999999999999998864321        100        122444


Q ss_pred             EEeecCCCHHHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           78 VELDVCADGATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        78 ~~~di~~~~~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      +.++   .-.++   ++.+.+.++ .|++|.+|++.
T Consensus       317 i~V~---ta~eM---~~av~~~~~-~Di~I~aAAVa  345 (475)
T PRK13982        317 IHVE---SARQM---LAAVEAALP-ADIAIFAAAVA  345 (475)
T ss_pred             EEec---CHHHH---HHHHHhhCC-CCEEEEecccc
Confidence            4443   22333   333334443 69999999885

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.36  E-value=0.0053  Score=45.25  Aligned_cols=44  Identities=18%  Similarity=0.117  Sum_probs=37.2

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      ..+.+++|+|+ |.+|...+..+...|+.|+++++++++.+...+
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes  206 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES  206 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            45889999998 899999999999999999999999887664443

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.35  E-value=0.0044  Score=43.44  Aligned_cols=36  Identities=33%  Similarity=0.512  Sum_probs=31.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecc
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   50 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~   50 (115)
                      .+...+++|.|+ ||+|..++..|++.|. ++.+++.+
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            456788999998 8999999999999998 78998875

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.35  E-value=0.003  Score=42.67  Aligned_cols=42  Identities=24%  Similarity=0.337  Sum_probs=36.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      .+++++|+|+++++|..+++.+...|++|++++++.+..+.+
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  185 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV  185 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            478999999999999999999999999999998877655443

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=97.34  E-value=0.0035  Score=41.13  Aligned_cols=42  Identities=26%  Similarity=0.512  Sum_probs=36.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE   60 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   60 (115)
                      ++.|+|++|.+|..++..|++.|++|.+.+|+++..+.+.+.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            478899889999999999999999999999988777665543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=97.34  E-value=0.0045  Score=43.30  Aligned_cols=44  Identities=27%  Similarity=0.316  Sum_probs=38.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE   60 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   60 (115)
                      .|+++.|+|.+ |+|...++.....|++|+++++++++.+.+.+.
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~l  209 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKL  209 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHh
Confidence            48999999997 999998888888999999999999888765553

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=97.34  E-value=0.0021  Score=46.23  Aligned_cols=47  Identities=28%  Similarity=0.475  Sum_probs=39.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhC-CeEEEEecccchHHHHHHHh
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~   61 (115)
                      .+.+++++|.|+ |.+|..+++.|...| .+|++++|+.++...+.+.+
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~  224 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL  224 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            467899999997 999999999999999 57999999887766555543

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.29  E-value=0.0013  Score=41.59  Aligned_cols=46  Identities=24%  Similarity=0.311  Sum_probs=38.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      .++.+++++|.|++.-+|..+++.|.+.|++|.++.|+.+.+.+..
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~~l   85 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKEHT   85 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHHHH
Confidence            4678999999999666799999999999999999999876554433

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=97.29  E-value=0.0025  Score=45.60  Aligned_cols=46  Identities=26%  Similarity=0.359  Sum_probs=40.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      ...-..++|+|++|.+|+.+++.|.++|+.|.+..|+.+..++...
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~  121 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG  121 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence            3456789999999999999999999999999999999887766655

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.27  E-value=0.0048  Score=40.79  Aligned_cols=74  Identities=23%  Similarity=0.398  Sum_probs=48.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      .++|.|+ |-+|..+|+.|.+.|+.|++++++++...+....-           .....+.+|-+ ++..++++      
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~-----------~~~~~v~gd~t-~~~~L~~a------   62 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADE-----------LDTHVVIGDAT-DEDVLEEA------   62 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhh-----------cceEEEEecCC-CHHHHHhc------
Confidence            4667776 78899999999999999999999988776633310           23556667764 44433322      


Q ss_pred             HcCCccEEEeCCc
Q 033624           99 AFGRVDALVNNAG  111 (115)
Q Consensus        99 ~~~~id~li~naG  111 (115)
                      .....|++|...|
T Consensus        63 gi~~aD~vva~t~   75 (225)
T COG0569          63 GIDDADAVVAATG   75 (225)
T ss_pred             CCCcCCEEEEeeC
Confidence            1224566655443

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=97.26  E-value=0.0033  Score=40.90  Aligned_cols=38  Identities=26%  Similarity=0.408  Sum_probs=34.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      .++.++.++|.|+ |.+|...++.|.+.|++|+++++..
T Consensus         6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            4678999999999 8899999999999999999987654

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.26  E-value=0.0039  Score=44.22  Aligned_cols=36  Identities=36%  Similarity=0.447  Sum_probs=30.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecc
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   50 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~   50 (115)
                      .+.+++++|.|+ ||+|..++..|+..|. ++.+++++
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            356778888876 8999999999999998 68888876

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=97.25  E-value=0.0016  Score=43.85  Aligned_cols=78  Identities=15%  Similarity=0.102  Sum_probs=55.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      .|++||||-+|-=|.-+++.|+..|+.|-.+-|..+.+....=+.-. .......+........|++ |...+..+++.+
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY-~nP~~h~~~~mkLHYgDmT-Dss~L~k~I~~i  105 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLY-SNPHTHNGASMKLHYGDMT-DSSCLIKLISTI  105 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhh-cCchhcccceeEEeecccc-chHHHHHHHhcc
Confidence            46999999999999999999999999999888776665432211111 1112233466888889997 777777777665

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.24  E-value=0.0058  Score=42.99  Aligned_cols=79  Identities=25%  Similarity=0.305  Sum_probs=50.4

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      -.|+.+||.|+++|+|...++.....++..+++..+.+..+ +.+.+   +       .   ....|. ++++.++.   
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~l---G-------A---d~vvdy-~~~~~~e~---  217 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKKL---G-------A---DEVVDY-KDENVVEL---  217 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHHc---C-------C---cEeecC-CCHHHHHH---
Confidence            35889999999999999988888788855555555555443 33333   1       1   122455 24333332   


Q ss_pred             HHHHH-cCCccEEEeCCcc
Q 033624           95 KAWEA-FGRVDALVNNAGI  112 (115)
Q Consensus        95 ~~~~~-~~~id~li~naG~  112 (115)
                       +.+. .+++|+++-|.|-
T Consensus       218 -~kk~~~~~~DvVlD~vg~  235 (347)
T KOG1198|consen  218 -IKKYTGKGVDVVLDCVGG  235 (347)
T ss_pred             -HHhhcCCCccEEEECCCC
Confidence             2222 5689999999886

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=97.20  E-value=0.0045  Score=42.38  Aligned_cols=42  Identities=24%  Similarity=0.396  Sum_probs=35.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      .|.+++|+|+++++|..+++.....|++|+.+.++.++.+.+
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l  184 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL  184 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            478999999999999998888888999999888877655443

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=97.17  E-value=0.0056  Score=42.53  Aligned_cols=41  Identities=24%  Similarity=0.282  Sum_probs=33.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~   57 (115)
                      .+.+++|+|+ +++|...++.+...|+ +|+++++++++.+.+
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a  210 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA  210 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH
Confidence            5889999986 8999999888888898 588888887766543

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=97.17  E-value=0.0042  Score=38.85  Aligned_cols=37  Identities=19%  Similarity=0.334  Sum_probs=32.8

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEec
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR   49 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r   49 (115)
                      +.+++|+.++|.|| |.+|...++.|++.|++|.+++.
T Consensus         8 ~l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp   44 (157)
T PRK06719          8 MFNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP   44 (157)
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence            45788999999998 88999999999999999988853

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.16  E-value=0.0035  Score=45.09  Aligned_cols=47  Identities=36%  Similarity=0.584  Sum_probs=39.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHh
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~   61 (115)
                      ++.+++++|.|+ |.+|..+++.|...|+ +|+++.|+.++...+.+.+
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~  226 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF  226 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence            467899999987 9999999999999997 7889999987776665554

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.12  E-value=0.0068  Score=40.01  Aligned_cols=41  Identities=24%  Similarity=0.332  Sum_probs=34.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      .+.+++|+|+++ +|..+++.+...|.+|++++++++..+.+
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~  174 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA  174 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            578999999988 99999998888999999998887654443

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=97.12  E-value=0.0094  Score=40.79  Aligned_cols=42  Identities=21%  Similarity=0.256  Sum_probs=35.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      .+.+++|.|+++++|..+++.+...|++|+.+.++.++.+.+
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~  186 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWL  186 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            478999999999999999999999999999888877655443

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.10  E-value=0.011  Score=39.13  Aligned_cols=35  Identities=34%  Similarity=0.452  Sum_probs=29.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEec
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAAR   49 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r   49 (115)
                      .+...+++|.|+ ||+|..+++.|+..|. ++.+++.
T Consensus        18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~   53 (228)
T cd00757          18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDD   53 (228)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            456788999986 8999999999999998 5777654

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=97.10  E-value=0.0093  Score=41.66  Aligned_cols=98  Identities=13%  Similarity=0.107  Sum_probs=55.6

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCC--CCccceEEEEeecCCCHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGS--PDSVRAVAVELDVCADGAT   88 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~di~~~~~~   88 (115)
                      ....+.++++.|.|. |.+|.++++.|...|.+|++..++.+...+......-......  -....+..+.+    ++..
T Consensus        11 ~~~~L~gktIgIIG~-GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvLaV----Pd~~   85 (330)
T PRK05479         11 DLSLIKGKKVAIIGY-GSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMILL----PDEV   85 (330)
T ss_pred             ChhhhCCCEEEEEee-HHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEEcC----CHHH
Confidence            345677999999987 6899999999999999998877764433222221100000000  00122332222    3344


Q ss_pred             HHHHH-HHHHHHcCCccEEEeCCccC
Q 033624           89 IEISV-QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        89 ~~~~~-~~~~~~~~~id~li~naG~~  113 (115)
                      ...++ +++.....+=.+|+.++|+.
T Consensus        86 ~~~V~~~~I~~~Lk~g~iL~~a~G~~  111 (330)
T PRK05479         86 QAEVYEEEIEPNLKEGAALAFAHGFN  111 (330)
T ss_pred             HHHHHHHHHHhcCCCCCEEEECCCCC
Confidence            46666 55554443334678888863

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.05  E-value=0.013  Score=41.35  Aligned_cols=82  Identities=21%  Similarity=0.222  Sum_probs=52.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEeccc-------------------chHHHHHHHhhCCCCCCCCCcc
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV-------------------DRLKSLCDEINKPGMVGSPDSV   73 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~   73 (115)
                      .+.+.+++|.|+ ||+|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+++..     +..
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~n-----p~v   98 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALN-----PDV   98 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHC-----CCc
Confidence            456789999988 8999999999999997 577777652                   23444555555432     234


Q ss_pred             ceEEEEeecCCCHHHHHHHHHHHHHHcCCccEEEeCC
Q 033624           74 RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNA  110 (115)
Q Consensus        74 ~~~~~~~di~~~~~~~~~~~~~~~~~~~~id~li~na  110 (115)
                      ++..+...++  .+....+       +...|++|.+.
T Consensus        99 ~v~~~~~~i~--~~~~~~~-------~~~~DvVvd~~  126 (355)
T PRK05597         99 KVTVSVRRLT--WSNALDE-------LRDADVILDGS  126 (355)
T ss_pred             EEEEEEeecC--HHHHHHH-------HhCCCEEEECC
Confidence            5666666663  2222222       23468887765

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.05  E-value=0.011  Score=43.10  Aligned_cols=49  Identities=22%  Similarity=0.247  Sum_probs=37.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc-hHHHHHHHhhC
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-RLKSLCDEINK   63 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~   63 (115)
                      .+.+++++|.|+ |++|.++|+.|.++|++|.+++++.. ......+.++.
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~   62 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEA   62 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHH
Confidence            456889999997 78999999999999999999986543 23333444544

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=97.04  E-value=0.011  Score=38.56  Aligned_cols=39  Identities=23%  Similarity=0.359  Sum_probs=33.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   52 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~   52 (115)
                      .++.|+.++|.|+ |.+|..-++.|++.|++|++++.+..
T Consensus         5 l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~   43 (205)
T TIGR01470         5 ANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE   43 (205)
T ss_pred             EEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            4578999999998 78899999999999999999886543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.04  E-value=0.001  Score=46.25  Aligned_cols=33  Identities=21%  Similarity=0.165  Sum_probs=28.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHhC-------CeEEEEeccc
Q 033624           19 VVMVTGASSGLGREFCLDLAKAG-------CRIVAAARRV   51 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g-------~~v~~~~r~~   51 (115)
                      +++|||++|.+|..++..|+.++       ..|++++++.
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~   43 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPP   43 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCC
Confidence            58999999999999999999854       5799999865

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=97.04  E-value=0.0065  Score=43.60  Aligned_cols=49  Identities=31%  Similarity=0.523  Sum_probs=42.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhh
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~   62 (115)
                      .++.+++++|.|+ |-+|.-++++|.++|. .|+++.|+.++.+++.+.+.
T Consensus       174 ~~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~  223 (414)
T COG0373         174 GSLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG  223 (414)
T ss_pred             cccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence            3478999999999 7789999999999995 68888899999888888764

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.01  E-value=0.0064  Score=41.19  Aligned_cols=42  Identities=26%  Similarity=0.352  Sum_probs=35.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      .+.+++|+|+++++|..+++.+...|+++++++++.+..+.+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~  185 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL  185 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            477899999999999999999999999999988876655443

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.00  E-value=0.0023  Score=40.09  Aligned_cols=92  Identities=17%  Similarity=0.217  Sum_probs=52.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH--H
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK--A   96 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~--~   96 (115)
                      ++-+.|- |-+|..+++.|++.|+.|.+.+|+++..+++.+.-.....+..+-......+-.-+ .+...++.++..  +
T Consensus         3 ~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v-~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    3 KIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCV-PDDDAVEAVLFGENI   80 (163)
T ss_dssp             EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-S-SSHHHHHHHHHCTTH
T ss_pred             EEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeec-ccchhhhhhhhhhHH
Confidence            4666776 78999999999999999999999988777655432110000000001112222233 366777777776  6


Q ss_pred             HHHcCCccEEEeCCcc
Q 033624           97 WEAFGRVDALVNNAGI  112 (115)
Q Consensus        97 ~~~~~~id~li~naG~  112 (115)
                      .....+=.++|++..+
T Consensus        81 ~~~l~~g~iiid~sT~   96 (163)
T PF03446_consen   81 LAGLRPGKIIIDMSTI   96 (163)
T ss_dssp             GGGS-TTEEEEE-SS-
T ss_pred             hhccccceEEEecCCc
Confidence            5555555666666543

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.98  E-value=0.0037  Score=39.91  Aligned_cols=43  Identities=28%  Similarity=0.383  Sum_probs=33.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhh
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~   62 (115)
                      ++.|.|+ |.+|..+|..++..|++|.+.+++++.++...+.++
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~   43 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIE   43 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHH
Confidence            3567887 899999999999999999999999887665544443

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.97  E-value=0.019  Score=38.40  Aligned_cols=36  Identities=31%  Similarity=0.366  Sum_probs=30.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecc
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   50 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~   50 (115)
                      .+...+++|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            456789999988 9999999999999997 57777654

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=96.95  E-value=0.0034  Score=41.76  Aligned_cols=63  Identities=17%  Similarity=0.260  Sum_probs=43.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCC---eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGC---RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      ++++|||++|-+|.++.+.+.++|.   +.+..+                            .-++|++ +.++.+++|+
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~----------------------------skd~DLt-~~a~t~~lF~   52 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIG----------------------------SKDADLT-NLADTRALFE   52 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEec----------------------------ccccccc-chHHHHHHHh
Confidence            5799999999999999999999875   122222                            2236775 6667777766


Q ss_pred             HHHHHcCCccEEEeCCccCC
Q 033624           95 KAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~~  114 (115)
                      +.     ++-.+|+.|++.|
T Consensus        53 ~e-----kPthVIhlAAmVG   67 (315)
T KOG1431|consen   53 SE-----KPTHVIHLAAMVG   67 (315)
T ss_pred             cc-----CCceeeehHhhhc
Confidence            54     4556666665543

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.94  E-value=0.0081  Score=41.55  Aligned_cols=47  Identities=34%  Similarity=0.491  Sum_probs=38.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHh
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~   61 (115)
                      ++.+++++|.|+ |.+|..+++.|...|. +|++++|+.++...+.+.+
T Consensus       175 ~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~  222 (311)
T cd05213         175 NLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL  222 (311)
T ss_pred             CccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc
Confidence            367899999988 9999999999998764 6888999888776666654

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.93  E-value=0.017  Score=39.08  Aligned_cols=40  Identities=20%  Similarity=0.334  Sum_probs=34.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK   55 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   55 (115)
                      .+++++|+|+++++|..+++.+...|++|+++.++.+..+
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~  178 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCA  178 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            4789999999999999999988899999999888766554

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=96.92  E-value=0.016  Score=38.03  Aligned_cols=48  Identities=27%  Similarity=0.359  Sum_probs=38.1

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc-chHHHHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCD   59 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~   59 (115)
                      -+.++.|+.++|.|| |..+..=++.|++.|++|++++.+. +++....+
T Consensus         6 l~~~l~~k~VlvvGg-G~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~   54 (210)
T COG1648           6 LFLDLEGKKVLVVGG-GSVALRKARLLLKAGADVTVVSPEFEPELKALIE   54 (210)
T ss_pred             eEEEcCCCEEEEECC-CHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHH
Confidence            356789999999999 7788888999999999999987665 44444443

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.92  E-value=0.021  Score=37.08  Aligned_cols=36  Identities=28%  Similarity=0.575  Sum_probs=31.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecc
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   50 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~   50 (115)
                      .+..++++|.|+ ||+|..++..|++.|. ++++++.+
T Consensus        18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            456788999998 8999999999999998 69998876

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.92  E-value=0.022  Score=37.38  Aligned_cols=36  Identities=28%  Similarity=0.467  Sum_probs=30.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCe-EEEEecc
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARR   50 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~-v~~~~r~   50 (115)
                      .+...+++|.|+ ||+|..+++.|++.|.. +.+++.+
T Consensus        25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            356778999987 89999999999999984 8888776

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.92  E-value=0.0037  Score=37.76  Aligned_cols=93  Identities=16%  Similarity=0.218  Sum_probs=51.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEE-ecccchHHHHHHHhhCCCCCCC---CCccceEEEEeecCCCHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGS---PDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..++-|.|+ |-+|..+++.|.+.|++|..+ +|+.+..+.+...+........   .....+.++.+    .++.+..+
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iav----pDdaI~~v   84 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAV----PDDAIAEV   84 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-----CCHHHHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEe----chHHHHHH
Confidence            446888888 778999999999999998765 5776666655554432110000   01223333333    23468888


Q ss_pred             HHHHHHH--cCCccEEEeCCccCC
Q 033624           93 VQKAWEA--FGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~--~~~id~li~naG~~~  114 (115)
                      .+++...  +.+=.+++||+|-.+
T Consensus        85 a~~La~~~~~~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   85 AEQLAQYGAWRPGQIVVHTSGALG  108 (127)
T ss_dssp             HHHHHCC--S-TT-EEEES-SS--
T ss_pred             HHHHHHhccCCCCcEEEECCCCCh
Confidence            8887654  333469999998653

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.90  E-value=0.012  Score=34.34  Aligned_cols=39  Identities=28%  Similarity=0.533  Sum_probs=31.0

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      ++|.|. +.+|+.+++.|.+.+..|++++++++..+.+.+
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~   39 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELRE   39 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh
Confidence            467777 689999999999977799999999877665543

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.90  E-value=0.018  Score=41.69  Aligned_cols=41  Identities=22%  Similarity=0.436  Sum_probs=34.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      ++.|.||.|.+|.++++.|.+.|.+|.+++|+++...+...
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~   42 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK   42 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH
Confidence            57899999999999999999999999999998766544433

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=96.89  E-value=0.011  Score=40.76  Aligned_cols=44  Identities=18%  Similarity=0.342  Sum_probs=36.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHhC--CeEEEEecccchHHHHHHHhhC
Q 033624           19 VVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEINK   63 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~   63 (115)
                      ++.|.|+ |++|..++..|+..|  .++++++++.+..+.....+..
T Consensus         2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~   47 (306)
T cd05291           2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLED   47 (306)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHH
Confidence            5788886 899999999999998  4799999998887776666653

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.87  E-value=0.0056  Score=41.93  Aligned_cols=43  Identities=23%  Similarity=0.269  Sum_probs=37.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      ++.|++++|+|.+.-+|+.++..|.+.|++|.++.+....+.+
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~~  197 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMAS  197 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHH
Confidence            5789999999999989999999999999999998876544433

>PLN00203 glutamyl-tRNA reductase

Probab=96.87  E-value=0.012  Score=43.55  Aligned_cols=46  Identities=28%  Similarity=0.541  Sum_probs=40.2

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHh
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~   61 (115)
                      +.+++++|.|+ |.+|..+++.|...|+ +|+++.|+.+..+.+...+
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~  310 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF  310 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence            67899999999 9999999999999997 6999999988877766654

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.86  E-value=0.0069  Score=37.21  Aligned_cols=43  Identities=26%  Similarity=0.347  Sum_probs=37.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      ++.|+.++|.|.+.-+|..++..|.++|++|.++.++...+++
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~   67 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS   67 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence            6789999999999999999999999999999998865544443

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.86  E-value=0.0049  Score=38.73  Aligned_cols=41  Identities=24%  Similarity=0.261  Sum_probs=31.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRL   54 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   54 (115)
                      ..+.||.++|.|- |.+|+.+|+.|...|++|+++..++-..
T Consensus        19 ~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~a   59 (162)
T PF00670_consen   19 LMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRA   59 (162)
T ss_dssp             S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHH
T ss_pred             eeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHH
Confidence            3567999999998 8899999999999999999999887543

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.85  E-value=0.024  Score=37.86  Aligned_cols=36  Identities=28%  Similarity=0.353  Sum_probs=30.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecc
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   50 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~   50 (115)
                      .+.+.+++|.|+ ||+|..+++.|++.|. ++.+++.+
T Consensus        21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            456788999988 8999999999999997 57777664

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.83  E-value=0.028  Score=33.95  Aligned_cols=79  Identities=20%  Similarity=0.368  Sum_probs=49.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCC-eEEEEeccc-------------------chHHHHHHHhhCCCCCCCCCccceE
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV-------------------DRLKSLCDEINKPGMVGSPDSVRAV   76 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~   76 (115)
                      .++++|.|+ |++|..+++.|+..|. ++.+++...                   .+.+.+.+.+++..     +..++.
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~n-----p~~~v~   75 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEIN-----PDVEVE   75 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHS-----TTSEEE
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhc-----Cceeee
Confidence            357888887 9999999999999998 588877641                   23344555555332     124566


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHHcCCccEEEeCC
Q 033624           77 AVELDVCADGATIEISVQKAWEAFGRVDALVNNA  110 (115)
Q Consensus        77 ~~~~di~~~~~~~~~~~~~~~~~~~~id~li~na  110 (115)
                      .+..++.  .+....++       ...|++|.+.
T Consensus        76 ~~~~~~~--~~~~~~~~-------~~~d~vi~~~  100 (135)
T PF00899_consen   76 AIPEKID--EENIEELL-------KDYDIVIDCV  100 (135)
T ss_dssp             EEESHCS--HHHHHHHH-------HTSSEEEEES
T ss_pred             eeecccc--cccccccc-------cCCCEEEEec
Confidence            6666662  33333333       2457777764

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=96.82  E-value=0.014  Score=40.12  Aligned_cols=83  Identities=18%  Similarity=0.213  Sum_probs=61.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      |-+++.-|+++++|.++.+.....|.+-+-+.|+....+++.+.++..+       ....+-      +++-..+-+...
T Consensus       161 GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lG-------A~~ViT------eeel~~~~~~k~  227 (354)
T KOG0025|consen  161 GDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLG-------ATEVIT------EEELRDRKMKKF  227 (354)
T ss_pred             CCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcC-------CceEec------HHHhcchhhhhh
Confidence            7789999999999999888888889999999999999999999998765       222222      222222233333


Q ss_pred             HHHcCCccEEEeCCcc
Q 033624           97 WEAFGRVDALVNNAGI  112 (115)
Q Consensus        97 ~~~~~~id~li~naG~  112 (115)
                      +...+++...+||.|-
T Consensus       228 ~~~~~~prLalNcVGG  243 (354)
T KOG0025|consen  228 KGDNPRPRLALNCVGG  243 (354)
T ss_pred             hccCCCceEEEeccCc
Confidence            4467788899999873

>PRK04148 hypothetical protein; Provisional

Probab=96.81  E-value=0.0077  Score=36.72  Aligned_cols=42  Identities=10%  Similarity=0.145  Sum_probs=34.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      .++.+++.|.+  .|..+|..|.+.|+.|++++.++...+.+.+
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~   57 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKK   57 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            46789999986  6678899999999999999999887665543

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.80  E-value=0.025  Score=40.19  Aligned_cols=36  Identities=36%  Similarity=0.449  Sum_probs=30.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecc
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   50 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~   50 (115)
                      .+...+++|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            355778999988 8999999999999997 68888765

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.80  E-value=0.0051  Score=42.37  Aligned_cols=43  Identities=28%  Similarity=0.401  Sum_probs=37.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      ++.||++.|.|.++-+|+.++..|.+.|++|.++.+......+
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e  198 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKA  198 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHH
Confidence            5789999999999999999999999999999999766554443

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.79  E-value=0.0098  Score=42.83  Aligned_cols=40  Identities=20%  Similarity=0.385  Sum_probs=34.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      +++|.|+ |.+|..+++.|.++|..|++++++++..+.+.+
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~   41 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD   41 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh
Confidence            5788887 999999999999999999999998877665543

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=96.79  E-value=0.017  Score=40.67  Aligned_cols=41  Identities=22%  Similarity=0.261  Sum_probs=33.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~   57 (115)
                      .|.+++|+|+ +++|...++.....|+ +|+++++++++.+.+
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a  226 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA  226 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            4789999975 8999998888888898 688888887765544

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.78  E-value=0.054  Score=40.10  Aligned_cols=43  Identities=19%  Similarity=0.130  Sum_probs=35.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      ...+.+++|.|+ |.+|...+..+...|+.|++++++.+.++..
T Consensus       161 ~vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a  203 (511)
T TIGR00561       161 KVPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  203 (511)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            345679999997 8999999999999999999999988765543

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.75  E-value=0.049  Score=38.10  Aligned_cols=40  Identities=18%  Similarity=0.214  Sum_probs=34.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR   53 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   53 (115)
                      ..+.|+++.|.|. |.||+++|+.|...|++|++.+++...
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~  181 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNK  181 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            3578999999987 889999999999999999999987643

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.74  E-value=0.03  Score=40.48  Aligned_cols=37  Identities=24%  Similarity=0.416  Sum_probs=32.3

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   52 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~   52 (115)
                      +.+++++|+|.+ ++|.++++.|+++|+.|.+.+....
T Consensus         3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~   39 (445)
T PRK04308          3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELK   39 (445)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            458899999985 8999999999999999999987654

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.73  E-value=0.0015  Score=37.90  Aligned_cols=38  Identities=24%  Similarity=0.343  Sum_probs=32.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      .+++++.++|.|+ |.+|..-++.|++.|++|.+++...
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            4678999999999 8899999999999999999998875

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.73  E-value=0.0066  Score=38.14  Aligned_cols=45  Identities=24%  Similarity=0.435  Sum_probs=34.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      ++.||+++|.|.+.-+|+.++..|.++|+.|.++......+++..
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~   77 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEIT   77 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHH
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCccccee
Confidence            578999999999999999999999999999999876655554433

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.72  E-value=0.042  Score=34.88  Aligned_cols=31  Identities=32%  Similarity=0.505  Sum_probs=26.5

Q ss_pred             EEEecCCChHHHHHHHHHHHhCC-eEEEEeccc
Q 033624           20 VMVTGASSGLGREFCLDLAKAGC-RIVAAARRV   51 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~   51 (115)
                      ++|.|+ ||+|..+++.|++.|. ++.+++.+.
T Consensus         2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            677776 9999999999999998 588888764

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.72  E-value=0.0087  Score=38.04  Aligned_cols=42  Identities=24%  Similarity=0.314  Sum_probs=35.7

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRL   54 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   54 (115)
                      ...+.|+++.|.|. |.||+.+|+.+...|++|+..+|+....
T Consensus        31 ~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~   72 (178)
T PF02826_consen   31 GRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPE   72 (178)
T ss_dssp             BS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHH
T ss_pred             ccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChh
Confidence            45678999999988 9999999999999999999999987643

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.71  E-value=0.0086  Score=41.85  Aligned_cols=39  Identities=21%  Similarity=0.267  Sum_probs=35.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   52 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~   52 (115)
                      .++.|+++.|.|. |.||+.+|+.|...|++|++.+|+..
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~  184 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK  184 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            4678999999998 99999999999999999999988754

>PRK08223 hypothetical protein; Validated

Probab=96.71  E-value=0.021  Score=39.19  Aligned_cols=36  Identities=28%  Similarity=0.407  Sum_probs=30.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecc
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   50 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~   50 (115)
                      .+...+++|.|+ ||+|..++..|+..|. ++.+++.+
T Consensus        24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            356788999988 8999999999999997 57777664

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.70  E-value=0.058  Score=37.47  Aligned_cols=39  Identities=18%  Similarity=0.189  Sum_probs=34.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   52 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~   52 (115)
                      ..+.|+++.|.|- |.||+.+++.|...|++|+.+++...
T Consensus       132 ~~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~  170 (312)
T PRK15469        132 YHREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRK  170 (312)
T ss_pred             CCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            4578999999987 89999999999999999999887643

>PLN02740 Alcohol dehydrogenase-like

Probab=96.70  E-value=0.026  Score=39.89  Aligned_cols=41  Identities=12%  Similarity=0.220  Sum_probs=33.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~   57 (115)
                      .|.+++|.|+ +++|...++.+...|+ +|+++++++++.+.+
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a  239 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG  239 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH
Confidence            4789999985 8999999998888898 588888887766544

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.66  E-value=0.018  Score=41.53  Aligned_cols=45  Identities=27%  Similarity=0.370  Sum_probs=38.2

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE   60 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   60 (115)
                      ...++++|.|+ |.+|..+++.|.+.|..|++++++++..+.+.+.
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~  273 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE  273 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence            34688999999 9999999999999999999999998876665543

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=96.63  E-value=0.024  Score=39.84  Aligned_cols=41  Identities=22%  Similarity=0.281  Sum_probs=33.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~   57 (115)
                      .|.+++|.|+ +++|...++.+...|+ +|++++++.++.+.+
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~  227 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA  227 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence            4789999975 8999999998888999 688888888776543

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=96.62  E-value=0.041  Score=37.93  Aligned_cols=37  Identities=19%  Similarity=0.222  Sum_probs=32.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   52 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~   52 (115)
                      .+.+++|.|+++++|..+++.....|++++++.++.+
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~  182 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRP  182 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCC
Confidence            4789999999999999999998899999888877654

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.62  E-value=0.034  Score=36.97  Aligned_cols=36  Identities=25%  Similarity=0.347  Sum_probs=30.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecc
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   50 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~   50 (115)
                      .+...+++|.|. ||+|..+++.|++.|. ++++++.+
T Consensus         8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755           8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            355778899988 8999999999999997 68887764

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.59  E-value=0.056  Score=36.82  Aligned_cols=42  Identities=31%  Similarity=0.359  Sum_probs=35.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      .+.+++|+|+++++|..+++.+...|++|+.++++.+..+.+
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~  183 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV  183 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            377899999999999999998889999999988877665443

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.58  E-value=0.0093  Score=40.57  Aligned_cols=44  Identities=25%  Similarity=0.336  Sum_probs=37.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHh
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~   61 (115)
                      +++++|.|+ ||-+++++..|.+.|+ +|.++.|+.++.+++.+.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            467888887 9999999999999998 4999999988877766544

>PRK07411 hypothetical protein; Validated

Probab=96.57  E-value=0.036  Score=39.64  Aligned_cols=82  Identities=23%  Similarity=0.257  Sum_probs=51.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEeccc-------------------chHHHHHHHhhCCCCCCCCCcc
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV-------------------DRLKSLCDEINKPGMVGSPDSV   73 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~   73 (115)
                      .+...+++|.|+ ||+|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+++..     +..
T Consensus        35 ~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~n-----p~v  108 (390)
T PRK07411         35 RLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEIN-----PYC  108 (390)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHC-----CCC
Confidence            355778999988 8999999999999997 577776642                   23334455555432     234


Q ss_pred             ceEEEEeecCCCHHHHHHHHHHHHHHcCCccEEEeCC
Q 033624           74 RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNA  110 (115)
Q Consensus        74 ~~~~~~~di~~~~~~~~~~~~~~~~~~~~id~li~na  110 (115)
                      ++..+...++ . +....+       +...|++|.+.
T Consensus       109 ~v~~~~~~~~-~-~~~~~~-------~~~~D~Vvd~~  136 (390)
T PRK07411        109 QVDLYETRLS-S-ENALDI-------LAPYDVVVDGT  136 (390)
T ss_pred             eEEEEecccC-H-HhHHHH-------HhCCCEEEECC
Confidence            5666666663 2 222222       23568888775

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.56  E-value=0.01  Score=40.67  Aligned_cols=39  Identities=26%  Similarity=0.390  Sum_probs=34.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   52 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~   52 (115)
                      ++.|++++|.|.++-.|+.++..|.+.|++|.++.|...
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~  194 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ  194 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch
Confidence            578999999999777999999999999999998887543

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=96.56  E-value=0.026  Score=38.69  Aligned_cols=42  Identities=24%  Similarity=0.381  Sum_probs=35.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      .+..++|.|+++.+|..+++.....|++|+.+.++.+..+.+
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL  180 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH
Confidence            478999999999999999888888899999888876655443

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.55  E-value=0.024  Score=39.16  Aligned_cols=41  Identities=20%  Similarity=0.295  Sum_probs=33.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCe-EEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~   57 (115)
                      .|.+++|+|+ +++|..+++.+...|++ |+++++++++.+.+
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~  204 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA  204 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            4889999976 89999999988889998 88888877765543

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.55  E-value=0.048  Score=37.97  Aligned_cols=41  Identities=24%  Similarity=0.414  Sum_probs=35.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      .|.+++|.|+ +++|..+++.+...|++|+++++++++.+.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            4789999999 9999999888888899999988887766543

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=96.55  E-value=0.047  Score=34.67  Aligned_cols=78  Identities=14%  Similarity=0.119  Sum_probs=53.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      ..+++|-|+-+.+|.++++.+..++|.|.-++..+.+-.                 ..-+.+..|- +..+.-+.+.+++
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A-----------------d~sI~V~~~~-swtEQe~~v~~~v   64 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA-----------------DSSILVDGNK-SWTEQEQSVLEQV   64 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc-----------------cceEEecCCc-chhHHHHHHHHHH
Confidence            457888999999999999999999999987775543210                 1122333433 2445556666666


Q ss_pred             HHHc--CCccEEEeCCcc
Q 033624           97 WEAF--GRVDALVNNAGI  112 (115)
Q Consensus        97 ~~~~--~~id~li~naG~  112 (115)
                      -+..  .++|.+|+-||-
T Consensus        65 g~sL~gekvDav~CVAGG   82 (236)
T KOG4022|consen   65 GSSLQGEKVDAVFCVAGG   82 (236)
T ss_pred             HHhhcccccceEEEeecc
Confidence            5544  379999998873

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=96.54  E-value=0.041  Score=38.59  Aligned_cols=41  Identities=15%  Similarity=0.250  Sum_probs=33.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~   57 (115)
                      .|.+++|.|+ +++|...++.....|+ +|++++++.++.+.+
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~  228 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA  228 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            4789999985 8999998888888898 799988887765543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.53  E-value=0.079  Score=32.25  Aligned_cols=30  Identities=37%  Similarity=0.665  Sum_probs=25.5

Q ss_pred             EEEecCCChHHHHHHHHHHHhCC-eEEEEecc
Q 033624           20 VMVTGASSGLGREFCLDLAKAGC-RIVAAARR   50 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~   50 (115)
                      ++|.|+ ||+|..+++.|++.|. ++.+++.+
T Consensus         2 VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           2 VLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            677887 9999999999999998 58887654

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.51  E-value=0.012  Score=42.30  Aligned_cols=42  Identities=19%  Similarity=0.273  Sum_probs=36.3

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      +.|++++|.|+ |.||+.+++.+...|++|+++++++.+...+
T Consensus       200 l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A  241 (413)
T cd00401         200 IAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQA  241 (413)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHH
Confidence            57999999998 7899999999999999999998887665443

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=96.49  E-value=0.024  Score=38.65  Aligned_cols=42  Identities=17%  Similarity=0.272  Sum_probs=35.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      .+.+++|.|+++++|..+++.....|++++++.++.+..+.+
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~  180 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAEL  180 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            478999999999999999998889999999888777655444

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.49  E-value=0.024  Score=39.17  Aligned_cols=46  Identities=24%  Similarity=0.389  Sum_probs=37.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHh
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~   61 (115)
                      .|.+++|+++++..|.-..+.-.-.|++|+.+.-.+++..-+.+++
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~l  195 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEEL  195 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhc
Confidence            4899999999999998766554457999999998888877666655

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.48  E-value=0.035  Score=44.29  Aligned_cols=76  Identities=25%  Similarity=0.288  Sum_probs=53.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhC-Ce-------------EEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeec
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAG-CR-------------IVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDV   82 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g-~~-------------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di   82 (115)
                      .+.++|.|+ |.+|...++.|++.. +.             |.+++++.+..+++.+.+           ..+..+..|+
T Consensus       569 ~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~-----------~~~~~v~lDv  636 (1042)
T PLN02819        569 SQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI-----------ENAEAVQLDV  636 (1042)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc-----------CCCceEEeec
Confidence            678999997 999999999998753 23             777888877766655543           1345778888


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEeCCcc
Q 033624           83 CADGATIEISVQKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~id~li~naG~  112 (115)
                      . +.+++..++       ..+|++|++...
T Consensus       637 ~-D~e~L~~~v-------~~~DaVIsalP~  658 (1042)
T PLN02819        637 S-DSESLLKYV-------SQVDVVISLLPA  658 (1042)
T ss_pred             C-CHHHHHHhh-------cCCCEEEECCCc
Confidence            5 655444432       248999998753

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=96.47  E-value=0.03  Score=38.78  Aligned_cols=38  Identities=13%  Similarity=0.170  Sum_probs=34.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      .++.|+++.|.|- |.||+.+|+.+...|.+|+..++..
T Consensus       141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~  178 (311)
T PRK08410        141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSG  178 (311)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCc
Confidence            4688999999998 8999999999999999999988753

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=96.47  E-value=0.092  Score=35.91  Aligned_cols=38  Identities=26%  Similarity=0.218  Sum_probs=32.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      +++.|.|+ |-+|..+|..|+..|++|++.+++++..+.
T Consensus         5 ~~V~vIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~   42 (295)
T PLN02545          5 KKVGVVGA-GQMGSGIAQLAAAAGMDVWLLDSDPAALSR   42 (295)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHH
Confidence            45777877 889999999999999999999998877654

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=96.45  E-value=0.027  Score=37.58  Aligned_cols=44  Identities=16%  Similarity=0.159  Sum_probs=37.3

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHh
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~   61 (115)
                      +.|+.++=.|+++|   .+++.|++.|++|..++-+++..+.+....
T Consensus        58 l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha  101 (243)
T COG2227          58 LPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHA  101 (243)
T ss_pred             CCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhh
Confidence            67899999999998   789999999999999998887776655443

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.45  E-value=0.0091  Score=32.70  Aligned_cols=35  Identities=34%  Similarity=0.433  Sum_probs=22.3

Q ss_pred             CC-cEEEEecCCChHHHHHHHHHH-HhCCeEEEEecc
Q 033624           16 NE-KVVMVTGASSGLGREFCLDLA-KAGCRIVAAARR   50 (115)
Q Consensus        16 ~~-~~~lvtG~~~giG~~~a~~l~-~~g~~v~~~~r~   50 (115)
                      .| |++||+|+++|.|++..-.++ ..|++.+.++..
T Consensus        37 ~GpK~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fE   73 (78)
T PF12242_consen   37 NGPKKVLVIGASTGYGLASRIAAAFGAGADTIGVSFE   73 (78)
T ss_dssp             TS-SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE--
T ss_pred             CCCceEEEEecCCcccHHHHHHHHhcCCCCEEEEeec
Confidence            44 899999999999998444444 557777766543

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.44  E-value=0.031  Score=38.83  Aligned_cols=47  Identities=13%  Similarity=0.323  Sum_probs=39.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC--eEEEEecccchHHHHHHHhhC
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINK   63 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~   63 (115)
                      .++++.|+|+ |.+|..++..|+..+.  .+.+++++.+.+......++.
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~   53 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSH   53 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHh
Confidence            4678999998 9999999999998886  699999988877666666654

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.44  E-value=0.017  Score=39.54  Aligned_cols=41  Identities=22%  Similarity=0.375  Sum_probs=34.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRL   54 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   54 (115)
                      ++.|++++|.|.+.-+|+.++..|.++|+.|.++......+
T Consensus       154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l  194 (285)
T PRK14191        154 EIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDL  194 (285)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHH
Confidence            57899999999999999999999999999998875443333

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=96.44  E-value=0.057  Score=36.57  Aligned_cols=41  Identities=17%  Similarity=0.250  Sum_probs=35.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      .+.+++|.|+++++|..+++.....|++|+.+.+++++.+.
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  182 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAAL  182 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            47899999999999999999888999999888877665443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=96.42  E-value=0.02  Score=42.61  Aligned_cols=40  Identities=20%  Similarity=0.268  Sum_probs=34.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      .+++|.|. +.+|+.+++.|.++|.++++++.+++..++..
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~  457 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELR  457 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence            56778877 88899999999999999999999988766654

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=96.39  E-value=0.038  Score=38.60  Aligned_cols=35  Identities=23%  Similarity=0.391  Sum_probs=33.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEec
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR   49 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r   49 (115)
                      ++.||++-|.|. |.||+.+++.+...|.+|+..++
T Consensus       139 el~gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~  173 (324)
T COG0111         139 ELAGKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDP  173 (324)
T ss_pred             cccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEECC
Confidence            677999999998 89999999999999999999998

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=96.38  E-value=0.037  Score=33.91  Aligned_cols=44  Identities=25%  Similarity=0.359  Sum_probs=35.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCC--eEEEEecccchHHHHHHHhh
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~   62 (115)
                      ++.|+|++|.+|..++..|...+.  ++++++++....+.....++
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~   47 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLS   47 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhh
Confidence            578999999999999999998864  69999999776655554444

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.38  E-value=0.054  Score=38.75  Aligned_cols=35  Identities=37%  Similarity=0.437  Sum_probs=29.3

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecc
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   50 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~   50 (115)
                      +...+++|.|+ ||+|..++..|+..|. ++.+++.+
T Consensus        40 L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D   75 (392)
T PRK07878         40 LKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFD   75 (392)
T ss_pred             HhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence            45778999988 8999999999999997 57777654

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=96.37  E-value=0.055  Score=32.05  Aligned_cols=66  Identities=23%  Similarity=0.352  Sum_probs=42.7

Q ss_pred             hHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHHHcC--CccE
Q 033624           28 GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFG--RVDA  105 (115)
Q Consensus        28 giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~~~~--~id~  105 (115)
                      |+|...++.+...|++|+++++++++.+.+.+ +   +       ..   ...|.. +.+    +.+++.+..+  ++|+
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~-~---G-------a~---~~~~~~-~~~----~~~~i~~~~~~~~~d~   61 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKE-L---G-------AD---HVIDYS-DDD----FVEQIRELTGGRGVDV   61 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH-T---T-------ES---EEEETT-TSS----HHHHHHHHTTTSSEEE
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHh-h---c-------cc---cccccc-ccc----cccccccccccccceE
Confidence            68899888888899999999998877655433 2   1       11   113332 222    3344444443  6999


Q ss_pred             EEeCCcc
Q 033624          106 LVNNAGI  112 (115)
Q Consensus       106 li~naG~  112 (115)
                      +|.|+|.
T Consensus        62 vid~~g~   68 (130)
T PF00107_consen   62 VIDCVGS   68 (130)
T ss_dssp             EEESSSS
T ss_pred             EEEecCc
Confidence            9999983

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=96.36  E-value=0.087  Score=35.98  Aligned_cols=42  Identities=14%  Similarity=0.252  Sum_probs=35.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      .+.+++|.|+++++|..+++.+...|++++++.++.+..+.+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  181 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC  181 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            478999999999999999999999999988887776655444

>PRK06932 glycerate dehydrogenase; Provisional

Probab=96.36  E-value=0.036  Score=38.50  Aligned_cols=38  Identities=21%  Similarity=0.232  Sum_probs=33.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      .++.|+++.|.|- |.||+.+++.+...|.+|+..++..
T Consensus       143 ~~l~gktvgIiG~-G~IG~~va~~l~~fg~~V~~~~~~~  180 (314)
T PRK06932        143 TDVRGSTLGVFGK-GCLGTEVGRLAQALGMKVLYAEHKG  180 (314)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCc
Confidence            4678999999998 9999999999999999999887653

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.36  E-value=0.017  Score=39.54  Aligned_cols=43  Identities=33%  Similarity=0.492  Sum_probs=36.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      ++.|+.++|.|.+.-+|+.++..|.++|++|.++.+....+.+
T Consensus       156 ~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~  198 (285)
T PRK10792        156 DTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRH  198 (285)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHH
Confidence            5779999999999999999999999999999998766544443

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.34  E-value=0.016  Score=39.73  Aligned_cols=42  Identities=21%  Similarity=0.336  Sum_probs=35.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK   55 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   55 (115)
                      ++.|++++|.|.+.-+|+.++..|.++|++|.++......+.
T Consensus       155 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~  196 (285)
T PRK14189        155 PLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLA  196 (285)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHH
Confidence            578999999999999999999999999999998765544443

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.34  E-value=0.11  Score=37.03  Aligned_cols=35  Identities=23%  Similarity=0.347  Sum_probs=32.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      .+++.|.||.|.+|..++..|.+.|+.|.+++++.
T Consensus        98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~  132 (374)
T PRK11199         98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD  132 (374)
T ss_pred             cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence            47899999999999999999999999999999864

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=96.33  E-value=0.053  Score=38.03  Aligned_cols=41  Identities=22%  Similarity=0.310  Sum_probs=32.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~   57 (115)
                      .|.+++|.|+ +++|..+++.....|+ +|++++++.++.+.+
T Consensus       184 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~  225 (365)
T cd08277         184 PGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKA  225 (365)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence            4789999975 8999999888888898 688888877665543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.32  E-value=0.019  Score=39.52  Aligned_cols=40  Identities=23%  Similarity=0.361  Sum_probs=35.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRL   54 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   54 (115)
                      .+.+++++|.|. |.+|+.++..|...|++|.+++|+.+..
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~  188 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL  188 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            456899999998 7899999999999999999999986653

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=96.32  E-value=0.0098  Score=37.12  Aligned_cols=41  Identities=32%  Similarity=0.507  Sum_probs=32.9

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhh
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~   62 (115)
                      ++++|+.+-+|+++|..|.++|.+|++.  +.+..+.+..++.
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~   41 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAP   41 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcC
Confidence            4789999999999999999999999988  5555555554443

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=96.32  E-value=0.071  Score=37.45  Aligned_cols=42  Identities=17%  Similarity=0.147  Sum_probs=32.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      .|.+++|.|+ +++|..+++.....|++|++++.+.++.....
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~  224 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAI  224 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHH
Confidence            4788999765 89999998888888999888877665544333

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.32  E-value=0.017  Score=39.82  Aligned_cols=38  Identities=26%  Similarity=0.288  Sum_probs=34.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEe-ccc
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAA-RRV   51 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~-r~~   51 (115)
                      ++.|++++|.|.++-+|..+|..|++.|+.|.++. |+.
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~  193 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR  193 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence            57899999999999999999999999999999984 554

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=96.30  E-value=0.055  Score=38.06  Aligned_cols=41  Identities=29%  Similarity=0.376  Sum_probs=32.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~   57 (115)
                      .+.+++|.|+ +++|..+++.+...|+ +|+++++++++.+.+
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a  232 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA  232 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH
Confidence            4788999985 8999998888888899 588888877765533

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.29  E-value=0.018  Score=39.48  Aligned_cols=43  Identities=23%  Similarity=0.322  Sum_probs=36.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      ++.|++++|.|.+.-+|+.++..|.+++++|.++......+.+
T Consensus       152 ~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~  194 (287)
T PRK14173        152 PLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPA  194 (287)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence            5789999999999999999999999999999887655444443

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=96.29  E-value=0.04  Score=37.86  Aligned_cols=41  Identities=29%  Similarity=0.420  Sum_probs=31.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      +.+++++|+++++|..+++.....|++|++++++.++.+.+
T Consensus       144 ~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~  184 (324)
T cd08291         144 AKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLL  184 (324)
T ss_pred             CcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            34455558999999998887778899999888887665544

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.29  E-value=0.021  Score=39.11  Aligned_cols=42  Identities=21%  Similarity=0.293  Sum_probs=35.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK   55 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   55 (115)
                      ++.|++++|.|.+.-+|+.++..|.+++++|.++......+.
T Consensus       155 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~  196 (284)
T PRK14190        155 DISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLA  196 (284)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHH
Confidence            578999999999999999999999999999998765444333

>PRK14851 hypothetical protein; Provisional

Probab=96.28  E-value=0.075  Score=40.71  Aligned_cols=82  Identities=15%  Similarity=0.244  Sum_probs=52.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEeccc-------------------chHHHHHHHhhCCCCCCCCCcc
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV-------------------DRLKSLCDEINKPGMVGSPDSV   73 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~   73 (115)
                      .+.+.+++|.|. ||+|..++..|+..|. ++.+++.+.                   .+.+.+.+.++...     +..
T Consensus        40 kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~in-----P~~  113 (679)
T PRK14851         40 RLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSIN-----PFL  113 (679)
T ss_pred             HHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhC-----CCC
Confidence            456789999986 8999999999999997 577776531                   22233344444332     235


Q ss_pred             ceEEEEeecCCCHHHHHHHHHHHHHHcCCccEEEeCC
Q 033624           74 RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNA  110 (115)
Q Consensus        74 ~~~~~~~di~~~~~~~~~~~~~~~~~~~~id~li~na  110 (115)
                      ++..+...++  ++.+..++       ...|++|.+.
T Consensus       114 ~I~~~~~~i~--~~n~~~~l-------~~~DvVid~~  141 (679)
T PRK14851        114 EITPFPAGIN--ADNMDAFL-------DGVDVVLDGL  141 (679)
T ss_pred             eEEEEecCCC--hHHHHHHH-------hCCCEEEECC
Confidence            6777777773  33333333       2468887654

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=96.27  E-value=0.073  Score=37.14  Aligned_cols=39  Identities=26%  Similarity=0.356  Sum_probs=32.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLK   55 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~   55 (115)
                      .+.+++|+| ++++|..+++.+...|+ +|++++++.++..
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~  216 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLE  216 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            578899997 59999999988888899 8888887766544

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=96.26  E-value=0.086  Score=37.19  Aligned_cols=41  Identities=24%  Similarity=0.340  Sum_probs=33.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~   57 (115)
                      .+.+++|.| .+++|..+++.+...|+ +|++++++.++.+.+
T Consensus       190 ~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a  231 (373)
T cd08299         190 PGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA  231 (373)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            367899996 58999999998889999 799998887765544

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.26  E-value=0.018  Score=41.66  Aligned_cols=40  Identities=23%  Similarity=0.292  Sum_probs=35.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRL   54 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   54 (115)
                      .+.|++++|.|. |.||+.+++.+...|++|+++++++.+.
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra  248 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICA  248 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhh
Confidence            357999999997 7999999999999999999999887654

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.26  E-value=0.089  Score=35.82  Aligned_cols=36  Identities=22%  Similarity=0.277  Sum_probs=30.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecc
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   50 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~   50 (115)
                      .+.+.+++|.|+ ||+|..+++.|++.|. ++.+++.+
T Consensus        27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            456788999988 8999999999999994 78888764

>PRK07574 formate dehydrogenase; Provisional

Probab=96.25  E-value=0.097  Score=37.46  Aligned_cols=38  Identities=21%  Similarity=0.226  Sum_probs=34.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      .++.|+++.|.|. |.||+.+++.|...|++|+..+|+.
T Consensus       188 ~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~  225 (385)
T PRK07574        188 YDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHR  225 (385)
T ss_pred             eecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCC
Confidence            4578999999988 7899999999999999999998875

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=96.25  E-value=0.087  Score=37.33  Aligned_cols=37  Identities=24%  Similarity=0.280  Sum_probs=31.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR   53 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   53 (115)
                      .|.+++|.|+ +++|...++.....|++|++++++.++
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~  214 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEK  214 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHH
Confidence            4788999876 899999998888889999888876554

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.24  E-value=0.021  Score=39.15  Aligned_cols=43  Identities=21%  Similarity=0.308  Sum_probs=36.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      ++.|++++|.|.+.-+|+.++..|.++|++|.++......+.+
T Consensus       161 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~  203 (287)
T PRK14176        161 DIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKK  203 (287)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHH
Confidence            5789999999999999999999999999999988755444443

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.24  E-value=0.087  Score=35.15  Aligned_cols=30  Identities=33%  Similarity=0.504  Sum_probs=24.7

Q ss_pred             EEEecCCChHHHHHHHHHHHhCC-eEEEEecc
Q 033624           20 VMVTGASSGLGREFCLDLAKAGC-RIVAAARR   50 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~   50 (115)
                      ++|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus         2 VlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D   32 (234)
T cd01484           2 VLLVGA-GGIGCELLKNLALMGFGQIHVIDMD   32 (234)
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            567775 8999999999999997 57777664

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PLN02928 oxidoreductase family protein

Probab=96.23  E-value=0.056  Score=38.09  Aligned_cols=38  Identities=26%  Similarity=0.398  Sum_probs=34.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      ..+.|+++.|.|. |.||+.+|+.+...|++|+.++|+.
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~  192 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW  192 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence            3578999999998 8999999999999999999998863

>PTZ00325 malate dehydrogenase; Provisional

Probab=96.23  E-value=0.016  Score=40.43  Aligned_cols=35  Identities=23%  Similarity=0.246  Sum_probs=29.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhC--CeEEEEecc
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAG--CRIVAAARR   50 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g--~~v~~~~r~   50 (115)
                      ..+++.|+|++|.+|..++..|+.++  .++++++++
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~   43 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV   43 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC
Confidence            45689999999999999999998654  579999983

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.23  E-value=0.083  Score=34.24  Aligned_cols=36  Identities=33%  Similarity=0.506  Sum_probs=29.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCe-EEEEecc
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARR   50 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~-v~~~~r~   50 (115)
                      .+...+++|.|+ +|+|..+++.|+..|.. +.+++.+
T Consensus        16 ~L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          16 KLRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             HHhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            345678888887 66999999999999985 7777654

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.22  E-value=0.021  Score=39.10  Aligned_cols=43  Identities=26%  Similarity=0.281  Sum_probs=36.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      ++.|+.++|.|.+.-+|+.++..|.++|++|.++......+.+
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~  197 (282)
T PRK14180        155 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKS  197 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHH
Confidence            5789999999999999999999999999999988655444443

>PLN00106 malate dehydrogenase

Probab=96.22  E-value=0.057  Score=37.73  Aligned_cols=36  Identities=19%  Similarity=0.165  Sum_probs=30.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC--eEEEEeccc
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRV   51 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~~   51 (115)
                      ..+++.|+|++|.+|..++..|+.++.  .+++++.+.
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~   54 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN   54 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC
Confidence            356899999999999999999997664  699999876

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.21  E-value=0.02  Score=39.16  Aligned_cols=43  Identities=23%  Similarity=0.364  Sum_probs=36.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      ++.|++++|.|.+.-+|+.++..|.+++++|.++......+.+
T Consensus       156 ~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~  198 (284)
T PRK14177        156 DVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPS  198 (284)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence            5789999999999999999999999999999988755444443

>PLN02827 Alcohol dehydrogenase-like

Probab=96.21  E-value=0.088  Score=37.27  Aligned_cols=39  Identities=13%  Similarity=0.230  Sum_probs=30.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCe-EEEEecccchHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLK   55 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~   55 (115)
                      .|.+++|.|+ +++|..+++.....|+. |+++++++++.+
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~  232 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAE  232 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHH
Confidence            4889999985 89999998888888985 667776766544

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=96.21  E-value=0.044  Score=37.32  Aligned_cols=42  Identities=21%  Similarity=0.302  Sum_probs=35.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      .+.+++|.|+++++|..+++.+...|++++++.++.++.+.+
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  179 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL  179 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH
Confidence            478999999999999999999999999999888877654433

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.20  E-value=0.021  Score=39.06  Aligned_cols=42  Identities=29%  Similarity=0.282  Sum_probs=35.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK   55 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   55 (115)
                      ++.|++++|.|.+.-+|+.++..|.++|+.|.++......+.
T Consensus       154 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~  195 (281)
T PRK14183        154 DVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLK  195 (281)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHH
Confidence            578999999999999999999999999999987754433333

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.20  E-value=0.027  Score=38.47  Aligned_cols=40  Identities=30%  Similarity=0.302  Sum_probs=34.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      +++.|.|+ |.+|..++..|+..|++|++.+++++..+...
T Consensus         5 ~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~   44 (292)
T PRK07530          5 KKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADRLEAGL   44 (292)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence            45777877 88999999999999999999999987766544

>PRK06487 glycerate dehydrogenase; Provisional

Probab=96.20  E-value=0.044  Score=38.10  Aligned_cols=37  Identities=19%  Similarity=0.218  Sum_probs=33.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      .++.|+++.|.|- |.||+.+|+.+...|.+|+..++.
T Consensus       144 ~~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~  180 (317)
T PRK06487        144 VELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLP  180 (317)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence            3688999999998 999999999999999999988875

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.19  E-value=0.022  Score=38.90  Aligned_cols=43  Identities=23%  Similarity=0.342  Sum_probs=36.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      ++.|++++|.|.+.-+|+.++..|.++|++|.++......+.+
T Consensus       155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~  197 (278)
T PRK14172        155 DIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKE  197 (278)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence            5789999999999999999999999999999988655444444

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.18  E-value=0.02  Score=39.44  Aligned_cols=38  Identities=18%  Similarity=0.281  Sum_probs=32.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      ++.|+| .|-+|.+++..|++.|++|++++++++..+..
T Consensus         4 ~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~   41 (308)
T PRK06129          4 SVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAA   41 (308)
T ss_pred             EEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHH
Confidence            578888 58899999999999999999999998765543

>PLN03139 formate dehydrogenase; Provisional

Probab=96.17  E-value=0.15  Score=36.53  Aligned_cols=38  Identities=29%  Similarity=0.378  Sum_probs=34.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      .++.|+++.|.|. |.||+.+++.|...|++|+..+++.
T Consensus       195 ~~L~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~  232 (386)
T PLN03139        195 YDLEGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLK  232 (386)
T ss_pred             cCCCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCC
Confidence            4688999999996 8899999999999999999988764

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=96.16  E-value=0.081  Score=37.84  Aligned_cols=44  Identities=11%  Similarity=0.012  Sum_probs=34.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC---eEEEEecccchHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC---RIVAAARRVDRLKSLCD   59 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~---~v~~~~r~~~~~~~~~~   59 (115)
                      .|.+++|.|+++++|...++.+...|+   +|+++++++++.+.+.+
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~  221 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQR  221 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHH
Confidence            367899999999999998877666554   79988888887665444

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.15  E-value=0.023  Score=38.79  Aligned_cols=40  Identities=23%  Similarity=0.336  Sum_probs=34.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      +++.|.|+ |-+|..+|..|++.|++|++++++++..+.+.
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~   41 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQ   41 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHH
Confidence            35778888 88999999999999999999999988776654

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=96.13  E-value=0.12  Score=35.68  Aligned_cols=41  Identities=34%  Similarity=0.375  Sum_probs=34.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      .+.+++|.| ++.+|..+++.+...|++|++++++.++.+.+
T Consensus       163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~  203 (333)
T cd08296         163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLA  203 (333)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Confidence            478999999 79999999888888999999998877665443

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.13  E-value=0.024  Score=38.84  Aligned_cols=43  Identities=21%  Similarity=0.282  Sum_probs=36.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      ++.||+++|.|.+.-+|+.++..|.+++++|.++......+.+
T Consensus       154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~  196 (284)
T PRK14170        154 QIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQ  196 (284)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence            5789999999999999999999999999999887654444443

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.13  E-value=0.023  Score=38.78  Aligned_cols=41  Identities=22%  Similarity=0.343  Sum_probs=34.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      +++.|.|+ |-+|..++..|+..|++|++++++++..+...+
T Consensus         4 ~~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~   44 (291)
T PRK06035          4 KVIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSEEILKNAME   44 (291)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHH
Confidence            45778877 889999999999999999999999887765433

>PLN02494 adenosylhomocysteinase

Probab=96.12  E-value=0.026  Score=41.29  Aligned_cols=38  Identities=18%  Similarity=0.340  Sum_probs=34.1

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR   53 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   53 (115)
                      +.|++++|.|. |.||+.+++.+...|++|+++++++.+
T Consensus       252 LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r  289 (477)
T PLN02494        252 IAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPIC  289 (477)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            57999999998 699999999999999999999887654

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=96.11  E-value=0.14  Score=35.13  Aligned_cols=89  Identities=17%  Similarity=0.205  Sum_probs=53.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCC-----CCCccceEEEEeecCCCHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVG-----SPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++-|.|. |-+|..+++.|++.|++|.+.+|+++..+.+.+.........     .....++.++.  + .+. .++.++
T Consensus         2 ~Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~--v-p~~-~~~~v~   76 (298)
T TIGR00872         2 QLGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVM--V-PHG-IVDAVL   76 (298)
T ss_pred             EEEEEcc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEE--c-Cch-HHHHHH
Confidence            3566665 789999999999999999999999887666544211000000     00011233322  2 233 677777


Q ss_pred             HHHHHHcCCccEEEeCCcc
Q 033624           94 QKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~  112 (115)
                      +++.....+=+++|++...
T Consensus        77 ~~l~~~l~~g~ivid~st~   95 (298)
T TIGR00872        77 EELAPTLEKGDIVIDGGNS   95 (298)
T ss_pred             HHHHhhCCCCCEEEECCCC
Confidence            7776655444678876554

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.11  E-value=0.025  Score=39.00  Aligned_cols=43  Identities=30%  Similarity=0.384  Sum_probs=36.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      ++.|++++|.|.+.-+|+.++..|.++|++|.++......+.+
T Consensus       155 ~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~  197 (297)
T PRK14186        155 DIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLAS  197 (297)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence            5789999999999999999999999999999887654444443

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.10  E-value=0.021  Score=39.12  Aligned_cols=35  Identities=20%  Similarity=0.283  Sum_probs=32.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEe
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAA   48 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~   48 (115)
                      ++.|+.+.|.|.++-+|+.++..|.+.|++|.++.
T Consensus       155 ~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~  189 (284)
T PRK14179        155 ELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTH  189 (284)
T ss_pred             CCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEEC
Confidence            57899999999999999999999999999999873

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.10  E-value=0.026  Score=38.60  Aligned_cols=43  Identities=23%  Similarity=0.335  Sum_probs=36.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      ++.|++++|.|.+.-+|+.++..|.++|++|.++......+.+
T Consensus       153 ~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~  195 (282)
T PRK14169        153 DVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQ  195 (282)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHH
Confidence            5789999999999999999999999999999887544443433

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.10  E-value=0.033  Score=31.40  Aligned_cols=42  Identities=14%  Similarity=0.358  Sum_probs=33.9

Q ss_pred             EEEecCCChHHHHHHHHHHHhC---CeEEEE-ecccchHHHHHHHhh
Q 033624           20 VMVTGASSGLGREFCLDLAKAG---CRIVAA-ARRVDRLKSLCDEIN   62 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g---~~v~~~-~r~~~~~~~~~~~~~   62 (115)
                      +.|. |+|.+|.++++.|.+.|   .+|.++ .|++++.++..+...
T Consensus         2 I~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~   47 (96)
T PF03807_consen    2 IGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG   47 (96)
T ss_dssp             EEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT
T ss_pred             EEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc
Confidence            3445 55999999999999999   888855 899988888777654

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.09  E-value=0.088  Score=36.79  Aligned_cols=45  Identities=16%  Similarity=0.181  Sum_probs=37.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHh
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~   61 (115)
                      .|+++-|+|.++ +|.--++.-.+-|++|++++++..+.+++.+.+
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L  225 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL  225 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc
Confidence            699999999976 888767666678999999999987777777765

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=96.09  E-value=0.17  Score=34.95  Aligned_cols=35  Identities=23%  Similarity=0.301  Sum_probs=30.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      .|.+++|+|+++++|..+++.....|++|+++.++
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~  196 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST  196 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc
Confidence            38899999999999999999888899998877754

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.09  E-value=0.026  Score=38.61  Aligned_cols=39  Identities=21%  Similarity=0.174  Sum_probs=33.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      ++-|.|+ |-+|..+|..++..|+.|++.+++++.++...
T Consensus         7 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~   45 (286)
T PRK07819          7 RVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGR   45 (286)
T ss_pred             EEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            5777777 79999999999999999999999988766533

>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.00  E-value=0.11  Score=37.90  Aligned_cols=37  Identities=22%  Similarity=0.277  Sum_probs=31.1

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   52 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~   52 (115)
                      +.+++++|.|. |..|.++++.|.+.|+.|.+.+++..
T Consensus        12 ~~~~~i~v~G~-G~sG~a~a~~L~~~G~~V~~~D~~~~   48 (458)
T PRK01710         12 IKNKKVAVVGI-GVSNIPLIKFLVKLGAKVTAFDKKSE   48 (458)
T ss_pred             hcCCeEEEEcc-cHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            45788999987 56788999999999999999997653

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.97  E-value=0.067  Score=37.40  Aligned_cols=41  Identities=27%  Similarity=0.306  Sum_probs=32.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCe-EEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~   57 (115)
                      .|.+++|.|+ +++|...++.....|++ |++++++.++.+.+
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~  217 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA  217 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            4789999975 99999988888888985 88888877665544

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PRK05086 malate dehydrogenase; Provisional

Probab=95.96  E-value=0.069  Score=37.05  Aligned_cols=34  Identities=26%  Similarity=0.331  Sum_probs=27.1

Q ss_pred             EEEEecCCChHHHHHHHHHHH-h--CCeEEEEecccc
Q 033624           19 VVMVTGASSGLGREFCLDLAK-A--GCRIVAAARRVD   52 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~-~--g~~v~~~~r~~~   52 (115)
                      +++|.|++|++|.+++..|.. .  +..++++++++.
T Consensus         2 KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~   38 (312)
T PRK05086          2 KVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV   38 (312)
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC
Confidence            689999999999999998855 2  346788887743

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.96  E-value=0.031  Score=38.38  Aligned_cols=43  Identities=26%  Similarity=0.433  Sum_probs=36.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      ++.||.++|.|.+.-+|+.++..|.+++++|.++......+.+
T Consensus       156 ~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~~  198 (288)
T PRK14171        156 NLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLSS  198 (288)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence            5789999999999999999999999999999887644444433

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=95.96  E-value=0.026  Score=35.09  Aligned_cols=40  Identities=20%  Similarity=0.365  Sum_probs=33.4

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHH
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE   60 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   60 (115)
                      +.|.|+ |..|.++|..|+.+|.+|.+.+|+.+..+.+.+.
T Consensus         2 I~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~   41 (157)
T PF01210_consen    2 IAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEINET   41 (157)
T ss_dssp             EEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHH
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHh
Confidence            567777 7789999999999999999999998766665554

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=95.96  E-value=0.077  Score=35.77  Aligned_cols=44  Identities=20%  Similarity=0.391  Sum_probs=36.6

Q ss_pred             EEEecCCChHHHHHHHHHHHhC----CeEEEEecccchHHHHHHHhhC
Q 033624           20 VMVTGASSGLGREFCLDLAKAG----CRIVAAARRVDRLKSLCDEINK   63 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g----~~v~~~~r~~~~~~~~~~~~~~   63 (115)
                      +.|+|++|.+|..++..|+..|    .++++++.+++.++.....++.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~   48 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQD   48 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHH
Confidence            3688998899999999999988    6899999988877776666654

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=95.95  E-value=0.037  Score=33.87  Aligned_cols=36  Identities=28%  Similarity=0.590  Sum_probs=30.3

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      ++|.|+ |.||.-+|.+|.+.|++|.+++|+. ..+..
T Consensus         1 I~I~G~-GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~   36 (151)
T PF02558_consen    1 ILIIGA-GAIGSLYAARLAQAGHDVTLVSRSP-RLEAI   36 (151)
T ss_dssp             EEEEST-SHHHHHHHHHHHHTTCEEEEEESHH-HHHHH
T ss_pred             CEEECc-CHHHHHHHHHHHHCCCceEEEEccc-cHHhh
Confidence            456666 8899999999999999999999988 65553

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=95.95  E-value=0.035  Score=40.65  Aligned_cols=40  Identities=23%  Similarity=0.253  Sum_probs=34.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRL   54 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   54 (115)
                      .+.|++++|.|. |.||+.+|+.+...|++|+++.+++...
T Consensus       251 ~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        251 MIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            578999999998 5799999999999999999998775543

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.94  E-value=0.034  Score=38.10  Aligned_cols=43  Identities=28%  Similarity=0.378  Sum_probs=36.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      ++.|++++|.|.+.-+|+.++..|.+++++|.++......+.+
T Consensus       154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~  196 (282)
T PRK14166        154 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSL  196 (282)
T ss_pred             CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence            5789999999999999999999999999999987655444443

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.94  E-value=0.19  Score=35.18  Aligned_cols=83  Identities=18%  Similarity=0.156  Sum_probs=52.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      .|.++||.|+ +.||...-......|+ +|++++-.+.+++-+.+ +-          .+.......- +..+.+.+.++
T Consensus       169 ~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~-~G----------a~~~~~~~~~-~~~~~~~~~v~  235 (354)
T KOG0024|consen  169 KGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAKK-FG----------ATVTDPSSHK-SSPQELAELVE  235 (354)
T ss_pred             cCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHH-hC----------CeEEeecccc-ccHHHHHHHHH
Confidence            3789999998 8999988777777888 58888888888776555 31          2222111111 12333333333


Q ss_pred             HHHHHcCCccEEEeCCcc
Q 033624           95 KAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~  112 (115)
                      ...... .+|+.|.|+|.
T Consensus       236 ~~~g~~-~~d~~~dCsG~  252 (354)
T KOG0024|consen  236 KALGKK-QPDVTFDCSGA  252 (354)
T ss_pred             hhcccc-CCCeEEEccCc
Confidence            332221 48999999986

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.93  E-value=0.036  Score=37.83  Aligned_cols=41  Identities=24%  Similarity=0.272  Sum_probs=33.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      +++.|.|+ |-+|..+|..|++.|.+|++++++++.+++..+
T Consensus         4 ~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~   44 (287)
T PRK08293          4 KNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKAKE   44 (287)
T ss_pred             cEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHH
Confidence            35777776 889999999999999999999999876665543

>PLN02306 hydroxypyruvate reductase

Probab=95.92  E-value=0.16  Score=36.36  Aligned_cols=38  Identities=16%  Similarity=0.150  Sum_probs=33.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHH-HhCCeEEEEeccc
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLA-KAGCRIVAAARRV   51 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~-~~g~~v~~~~r~~   51 (115)
                      .++.|+++.|.|. |.||+.+|+.+. ..|.+|+..++..
T Consensus       161 ~~L~gktvGIiG~-G~IG~~vA~~l~~~fGm~V~~~d~~~  199 (386)
T PLN02306        161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQ  199 (386)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHhcCCCEEEEECCCC
Confidence            3578999999988 899999999986 7899999998764

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.90  E-value=0.034  Score=38.28  Aligned_cols=43  Identities=19%  Similarity=0.303  Sum_probs=36.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      ++.|+.++|.|.+.-+|+.++..|.+++++|.++......+.+
T Consensus       157 ~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~  199 (294)
T PRK14187        157 NLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLAD  199 (294)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHH
Confidence            5789999999999999999999999999999987655444443

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=95.90  E-value=0.075  Score=36.40  Aligned_cols=41  Identities=12%  Similarity=0.306  Sum_probs=34.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      .+.+++|.|+.+.+|..+++.....|++|+.+.++.++...
T Consensus       140 ~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~  180 (327)
T PRK10754        140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQR  180 (327)
T ss_pred             CCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            47899999999999999998888899999888877665443

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=95.86  E-value=0.19  Score=34.93  Aligned_cols=41  Identities=24%  Similarity=0.304  Sum_probs=33.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~   57 (115)
                      .+.+++|+|+ +++|..+++.+...|+ +|++++++.++.+.+
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~  213 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA  213 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            4789999985 8999999998889999 788887777665433

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=95.85  E-value=0.037  Score=38.20  Aligned_cols=43  Identities=26%  Similarity=0.274  Sum_probs=36.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      ++.|+.++|.|.+.-+|+.++..|.++|++|.++......+.+
T Consensus       164 ~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~~  206 (299)
T PLN02516        164 PIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPES  206 (299)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence            5789999999999999999999999999999988654443433

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.85  E-value=0.15  Score=32.98  Aligned_cols=36  Identities=25%  Similarity=0.452  Sum_probs=28.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCe-EEEEecc
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARR   50 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~-v~~~~r~   50 (115)
                      .+...+++|.|+ +|+|..+++.|+..|.. +.+++..
T Consensus        18 ~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          18 RLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            345778888876 77999999999999984 7777654

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=95.84  E-value=0.11  Score=39.52  Aligned_cols=35  Identities=23%  Similarity=0.238  Sum_probs=29.5

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecc
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   50 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~   50 (115)
                      +...+++|.|+ ||+|..+++.|+.-|. ++++++..
T Consensus       336 L~~~kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~D  371 (664)
T TIGR01381       336 YSQLKVLLLGA-GTLGCNVARCLIGWGVRHITFVDNG  371 (664)
T ss_pred             HhcCeEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCC
Confidence            45788999988 9999999999999998 57777653

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=95.84  E-value=0.028  Score=36.42  Aligned_cols=35  Identities=26%  Similarity=0.383  Sum_probs=33.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEe
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAA   48 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~   48 (115)
                      ++.||.++|.|.+.-+|+.++..|.++|++|.+++
T Consensus        59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~   93 (197)
T cd01079          59 RLYGKTITIINRSEVVGRPLAALLANDGARVYSVD   93 (197)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEe
Confidence            68899999999999999999999999999999885

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	115
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		2e-10
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		2e-10
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		2e-10
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		2e-10
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		1e-09
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		1e-09
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		1e-08
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		3e-08
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		4e-08
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		4e-08
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		4e-08
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		5e-08
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		6e-08
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		6e-08
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		7e-08
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		1e-07
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		2e-07
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-07
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		2e-07
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		2e-07
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-07
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		3e-07
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		3e-07
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-07
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		3e-07
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		3e-07
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-07
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		3e-07
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		4e-07
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		4e-07
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		4e-07
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		4e-07
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		4e-07
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		4e-07
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		6e-07
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		8e-07
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		8e-07
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		9e-07
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		9e-07
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		1e-06
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		1e-06
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		1e-06
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		1e-06
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		1e-06
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-06
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		2e-06
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		2e-06
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		2e-06
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		2e-06
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		2e-06
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		2e-06
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		2e-06
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		2e-06
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		2e-06
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		3e-06
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		3e-06
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-06
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-06
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		4e-06
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		5e-06
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		5e-06
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		6e-06
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		6e-06
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		6e-06
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		7e-06
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		8e-06
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		9e-06
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		9e-06
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		9e-06
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		2e-05
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		2e-05
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		2e-05
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		2e-05
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		2e-05
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		2e-05
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		2e-05
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-05
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		3e-05
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		3e-05
3u9l_A	324	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		3e-05
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		3e-05
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		4e-05
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		4e-05
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		4e-05
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		5e-05
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		5e-05
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		5e-05
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		5e-05
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		6e-05
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		6e-05
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		7e-05
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		8e-05
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		8e-05
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		8e-05
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		1e-04
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		1e-04
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		1e-04
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		1e-04
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		1e-04
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		1e-04
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		2e-04
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		2e-04
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		2e-04
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		2e-04
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		2e-04
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		2e-04
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		2e-04
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		2e-04
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		2e-04
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		2e-04
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		2e-04
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		2e-04
1xse_A	295	Crystal Structure Of Guinea Pig 11beta-Hydroxystero		2e-04
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		2e-04
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		2e-04
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		2e-04
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		2e-04
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		2e-04
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		2e-04
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		3e-04
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		3e-04
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		3e-04
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		3e-04
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		3e-04
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		3e-04
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		3e-04
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		3e-04
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		3e-04
3dwf_A	276	Crystal Structure Of The Guinea Pig 11beta-Hydroxys		3e-04
3g49_A	277	N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-		4e-04
3lz6_A	263	Guinea Pig 11beta Hydroxysteroid Dehydrogenase With		4e-04
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		4e-04
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		4e-04
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		4e-04
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		5e-04
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		5e-04
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		5e-04
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		6e-04
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-04
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		6e-04
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		6e-04
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		6e-04
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		6e-04
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		7e-04
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		7e-04
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		7e-04
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		8e-04

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 9/103 (8%)
Query: 12  WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKPGMVGSP 70
           + DL  KVV++TG+S+GLG+   +  A    ++V   R + D   S+ +EI K G     
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG---- 57
Query: 71  DSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIR 113
               A+AV+ DV  +   I + VQ A + FG++D ++NNAG+ 
Sbjct: 58  ---EAIAVKGDVTVESDVINL-VQSAIKEFGKLDVMINNAGLE 96

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 9/103 (8%)
Query: 12  WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKPGMVGSP 70
           + DL  KVV++TG+S+GLG+   +  A    ++V   R + D   S+ +EI K G     
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG---- 57
Query: 71  DSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIR 113
               A+AV+ DV  +   I + VQ A + FG++D ++NNAG+ 
Sbjct: 58  ---EAIAVKGDVTVESDVINL-VQSAIKEFGKLDVMINNAGLE 96

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 9/103 (8%)
Query: 12  WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKPGMVGSP 70
           + DL  KVV++TG+S+GLG+   +  A    ++V   R + D   S+ +EI K G     
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG---- 57
Query: 71  DSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIR 113
               A+AV+ DV  +   I + VQ A + FG++D ++NNAG+ 
Sbjct: 58  ---EAIAVKGDVTVESDVINL-VQSAIKEFGKLDVMINNAGLE 96

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 9/102 (8%)
Query: 12  WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKPGMVGSP 70
           + DL  KVV++TG+S+GLG+   +  A    ++V   R + D   S+ +EI K G     
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG---- 57
Query: 71  DSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               A+AV+ DV  +   I + VQ A + FG++D ++NNAG+
Sbjct: 58  ---EAIAVKGDVTVESDVINL-VQSAIKEFGKLDVMINNAGL 95

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 8/96 (8%)
Query: 17  EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
           +KV+++TGAS G+G     +L  AG +I+  ARR  R++++  EI   G  G+     A+
Sbjct: 4   DKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG--GT-----AL 56
Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           A  LDV  D  ++    Q A + +GR+D LVNNAG+
Sbjct: 57  AQVLDVT-DRHSVAAFAQAAVDTWGRIDVLVNNAGV 91

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 9/99 (9%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVA-AARRVDRLKSLCDEINKPGMVGSPDSV 73
           L  KV +VTGAS G+GR   +DLAK G  +V   A    +   + DEI K G        
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGS------- 54
Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            A+AV  DV A+   +   V++  + FG+VD LVNNAG+
Sbjct: 55  DAIAVRADV-ANAEDVTNMVKQTVDVFGQVDILVNNAGV 92

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           KV +VTGASSG GR        AG  ++  ARR + L  L        +   PD  RA A
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDL--------VAAYPD--RAEA 55
Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           + LDV  DG  I++        +GRVD LVNNAG
Sbjct: 56  ISLDVT-DGERIDVVAADVLARYGRVDVLVNNAG 88

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 12/102 (11%)
Query: 11  PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSP 70
           P   L +KVV++TGA +GLG+E+    AK G ++V    + D  K++ DEI   G    P
Sbjct: 316 PTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK-DATKTV-DEIKAAGGEAWP 373
Query: 71  DSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           D       + DV  D   I   ++   + +G +D LVNNAGI
Sbjct: 374 D-------QHDVAKDSEAI---IKNVIDKYGTIDILVNNAGI 405

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 24/106 (22%)
Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIV-----------AAARRVDRLKSLCDEINKPGM 66
           +V +VTGA +GLGRE+ L  A+ G ++V            A++R   +  + DEI K G 
Sbjct: 20  RVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADI--VVDEIRKAGG 77
Query: 67  VGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                   AVA + +   DGA +   ++ A +AFGRVD LVNNAGI
Sbjct: 78  -------EAVA-DYNSVIDGAKV---IETAIKAFGRVDILVNNAGI 112

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 14/96 (14%)
Query: 17  EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
           +K+V++TGASSG+G       ++ G  ++  ARRV+RLK+L    N P           +
Sbjct: 16  KKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL----NLPN---------TL 62
Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             ++DV  D  T + ++ +A + +G  DA+VNNAG+
Sbjct: 63  CAQVDVT-DKYTFDTAITRAEKIYGPADAIVNNAGM 97

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 11  PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSP 70
           P     ++VV++TG  SGLGR   + LA  G ++           SL D ++  G+  S 
Sbjct: 7   PTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKL-----------SLVD-VSSEGLEASK 54
Query: 71  DSVRAVAVELDV------CADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
            +V   A + +V       +D A +E  V    E FGR+D   NNAGI G
Sbjct: 55  AAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEG 104

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 62/112 (55%), Gaps = 6/112 (5%)
Query: 5   VSDHLEPWHDL-NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINK 63
           +S H +P  DL N+++++VTGAS G+GRE  +  A+ G  ++   R  ++L+ +   IN+
Sbjct: 1   MSLHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINE 60
Query: 64  PGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
                +    +   ++L  C      +++ Q+    + R+D +++NAG+ G+
Sbjct: 61  E----TGRQPQWFILDLLTCTSEDCQQLA-QRIAVNYPRLDGVLHNAGLLGD 107

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 17  EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
           EKV ++TG+S+G+GR   +  A+ G ++    R  +RL+    +I   G+  S  +V +V
Sbjct: 6   EKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGV--SEQNVNSV 63
Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
               DV  D    EI +      FG++D LVNNAG
Sbjct: 64  VA--DVTTDAGQDEI-LSTTLGKFGKLDILVNNAG 95

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Query: 8   HLEPWHDL-NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGM 66
           H +P  DL N+++++VTGAS G+GRE  +  A+ G  ++   R  ++L+ +   IN+   
Sbjct: 2   HYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEE-- 59
Query: 67  VGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
             +    +   ++L  C      +++ Q+    + R+D +++NAG+ G+
Sbjct: 60  --TGRQPQWFILDLLTCTSENCQQLA-QRIAVNYPRLDGVLHNAGLLGD 105

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 13  HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDS 72
           H L  KV ++TGAS G+G      LA+ G  +   AR VDRL+ +  E+ +         
Sbjct: 20  HMLEMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQ------EQG 73
Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           V      LDV    +  E S +K  E FG VD +V NAG+
Sbjct: 74  VEVFYHHLDVSKAESVEEFS-KKVLERFGDVDVVVANAGL 112

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 12  WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPD 71
           +  L  KVV+VTGA SG+GR      A     +VA     DRL  +  E+   G      
Sbjct: 2   YQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK----- 56
Query: 72  SVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               + V+ DV      +E  V++ +E + R+D L NNAGI
Sbjct: 57  --EVLGVKADVSKK-KDVEEFVRRTFETYSRIDVLCNNAGI 94

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L +KVV+++G    LG       A+ G  +V AAR V+RL+ +  ++   G        R
Sbjct: 9   LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGR-------R 61
Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
           A++V  D+  D A +   V +  +A+GRVD ++NNA
Sbjct: 62  ALSVGTDIT-DDAQVAHLVDETMKAYGRVDVVINNA 96

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           ++ KV ++TG+SSG+G       AK G  IV  AR+VDRL      + +         VR
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKE------KFGVR 58
Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
            + V +DV A    ++  V+    +FG  D LVNNAG   N
Sbjct: 59  VLEVAVDV-ATPEGVDAVVESVRSSFGGADILVNNAGTGSN 98

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI--NKPGMVGSPDS 72
           L  +V +VTG ++G+G+    +L + G  +V A+R+++RLKS  DE+  N P        
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLP----PTKQ 71
Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
            R + ++ ++  +   +   V+   + FG+++ LVNN G
Sbjct: 72  ARVIPIQCNI-RNEEEVNNLVKSTLDTFGKINFLVNNGG 109

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 8   HLEPWHDL-NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGM 66
           H +P  DL N+++++VTGAS G+GRE     A+ G  ++   R  ++L+ +   IN+   
Sbjct: 2   HYQPKQDLLNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEE-- 59
Query: 67  VGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
             +    +   ++L  C      +++ Q+    + R+D +++NAG+ G+
Sbjct: 60  --TGRQPQWFILDLLTCTSENCQQLA-QRIAVNYPRLDGVLHNAGLLGD 105

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           ++ KV ++TG+SSG+G       AK G  IV  AR+VDRL      + +         VR
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKE------KFGVR 58
Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
            + V +DV A    ++  V+    +FG  D LVNNAG   N
Sbjct: 59  VLEVAVDV-ATPEGVDAVVESVRSSFGGADILVNNAGTGSN 98

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 8   HLEPWHDL-NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGM 66
           H +P  DL N+++++VTGAS G+GRE     A+ G  ++   R  ++L+ +   IN+   
Sbjct: 23  HYQPKQDLLNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEE-- 80
Query: 67  VGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
             +    +   ++L  C      +++ Q+    + R+D +++NAG+ G+
Sbjct: 81  --TGRQPQWFILDLLTCTSENCQQLA-QRIVVNYPRLDGVLHNAGLLGD 126

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 53/109 (48%), Gaps = 21/109 (19%)
Query: 8   HLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINK---- 63
           + +      +K+ +VTGA SG+GR   + LA AG  +  A RR+D L+    EI      
Sbjct: 19  YFQSXSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALC 78
Query: 64  -PGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
            P  V  PDSVRA+          AT+        E FGRVD L NNAG
Sbjct: 79  VPTDVTDPDSVRALFT--------ATV--------EKFGRVDVLFNNAG 111

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 21/112 (18%)
Query: 6   SDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI--NK 63
           S+ +  + +L  KV +VTGAS G+G+     LA+ G +++  A      +++ D +  N 
Sbjct: 1   SNAMSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG 60
Query: 64  PGM---VGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            GM   V +P+S+ AV                ++   + FG VD LVNNAGI
Sbjct: 61  KGMALNVTNPESIEAV----------------LKAITDEFGGVDILVNNAGI 96

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
            + K V++TG+S+G+GR   +  A+ G  +    R  +RL+     I K G+  S   V 
Sbjct: 4   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGV--SEKQVN 61
Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           +V    DV  +    +I +    + FG++D LVNNAG
Sbjct: 62  SVVA--DVTTEDGQDQI-INSTLKQFGKIDVLVNNAG 95

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Query: 19  VVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           VV+VTGAS G+G+   L L KAGC++ V  AR     + +  +I   G        +A+ 
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG-------QAIT 55
Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
              DV  + A +E  ++ A +A+G +D +VNNAGI
Sbjct: 56  FGGDVSKE-ADVEAMMKTAIDAWGTIDVVVNNAGI 89

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 21/112 (18%)
Query: 6   SDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI--NK 63
           S+ +  + +L  KV +VTGAS G+G+     LA+ G +++  A      +++ D +  N 
Sbjct: 1   SNAMSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG 60
Query: 64  PGM---VGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            GM   V +P+S+ AV                ++   + FG VD LVNNAGI
Sbjct: 61  KGMALNVTNPESIEAV----------------LKAITDEFGGVDILVNNAGI 96

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 21/112 (18%)
Query: 6   SDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI--NK 63
           S+ +  + +L  KV +VTGAS G+G+     LA+ G +++  A      +++ D +  N 
Sbjct: 1   SNAMSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG 60
Query: 64  PGM---VGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            GM   V +P+S+ AV                ++   + FG VD LVNNAGI
Sbjct: 61  KGMALNVTNPESIEAV----------------LKAITDEFGGVDILVNNAGI 96

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 17/103 (16%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI-NKPGMVGSPDSV 73
           L  KV +VTG++ G+GR     LA AG  ++      +R K++ +EI NK G       V
Sbjct: 5   LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYG-------V 57
Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGR----VDALVNNAGI 112
           +A  VE+++ +     E S+ KA+E        +D LVNNAGI
Sbjct: 58  KAHGVEMNLLS-----EESINKAFEEIYNLVDGIDILVNNAGI 95

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           K V++TG+S+G+GR   +  AK G ++    R  DRL+    +I K G+    + + AV 
Sbjct: 27  KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGV--PAEKINAVV 84
Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
            ++   +    I   +      FG++D LVNNAG
Sbjct: 85  ADVTEASGQDDI---INTTLAKFGKIDILVNNAG 115

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           +   K+ +VTGAS G+GR     LA  G +++  A   +  +++ D +   G        
Sbjct: 2   NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGK------- 54
Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               + L+V  D A+IE  ++K    FG VD LVNNAGI
Sbjct: 55  ---GLMLNVT-DPASIESVLEKIRAEFGEVDILVNNAGI 89

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           +   K+ +VTGAS G+GR     LA  G +++  A   +  +++ D +   G        
Sbjct: 2   NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGK------- 54
Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               + L+V  D A+IE  ++K    FG VD LVNNAGI
Sbjct: 55  ---GLMLNVT-DPASIESVLEKIRAEFGEVDILVNNAGI 89

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           +   K+ +VTGAS G+GR     LA  G +++  A   +  +++ D +   G        
Sbjct: 2   NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGK------- 54
Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               + L+V  D A+IE  ++K    FG VD LVNNAGI
Sbjct: 55  ---GLMLNVT-DPASIESVLEKIRAEFGEVDILVNNAGI 89

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           DLN++V +VTG  SG+GR      AK G  +V A    D    + +EI            
Sbjct: 24  DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGS---------- 73
Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +A  V +DV +     E  V+K    +GRVD LVNNAG 
Sbjct: 74  KAFGVRVDVSS-AKDAESXVEKTTAKWGRVDVLVNNAGF 111

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 17  EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
           +KV +VTGA  G+G+   L L K G  +  A       K++  EIN+ G         AV
Sbjct: 2   KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG-------HAV 54
Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           AV++DV +D   +  +V++A +  G  D +VNNAG+
Sbjct: 55  AVKVDV-SDRDQVFAAVEQARKTLGGFDVIVNNAGV 89

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 9/96 (9%)
Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
           K  +VTGAS G+GR   L LA+ G  + V  A   ++ +++ +EI   G       V + 
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKG-------VDSF 57
Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           A++ +V AD   ++  +++    FG +D LVNNAGI
Sbjct: 58  AIQANV-ADADEVKAXIKEVVSQFGSLDVLVNNAGI 92

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           KV ++TGAS G+G      LA+ G  +   AR VDRL+ +  E+ +         V    
Sbjct: 3   KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQ------EQGVEVFY 56
Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             LDV    +  E S +K  E FG VD +V NAG+
Sbjct: 57  HHLDVSKAESVEEFS-KKVLERFGDVDVVVANAGL 90

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  K+ +VTGASSG+GR   L  A+ G ++V  AR  + L  L DEI             
Sbjct: 6   LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAG-------GGGE 58
Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
           A A+  DV  D A  E  V+ A   FG +D   NNAG  G
Sbjct: 59  AAALAGDV-GDEALHEALVELAVRRFGGLDTAFNNAGALG 97

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 9/96 (9%)
Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
           K  +VTGAS G+GR   L LA+ G  + V  A   ++ +++ +EI   G       V + 
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKG-------VDSF 63
Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           A++ +V AD   ++  +++    FG +D LVNNAGI
Sbjct: 64  AIQANV-ADADEVKAMIKEVVSQFGSLDVLVNNAGI 98

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 12  WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPD 71
             DL+ + V+VTG + G+GR      A+AG  +  AAR    L S+  E+ + G      
Sbjct: 36  MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG------ 89
Query: 72  SVRAVAVELDV-----CADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +   + V LDV     CAD A      +   +AFG +D +  NAGI
Sbjct: 90  AGNVIGVRLDVSDPGSCADAA------RTVVDAFGALDVVCANAGI 129

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 18/109 (16%)
Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGM------- 66
           DL+ K  ++TGAS+G+G++  L  A+AG ++  AAR  D L+ + DEI   G        
Sbjct: 29  DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRC 88
Query: 67  -VGSPDSVRAV---------AVELDVCADG-ATIEISVQKAWEAFGRVD 104
            V  PD VR +          +++ VC  G  +++  +    E F R+ 
Sbjct: 89  DVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQ 137

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  +  +VTGA SG+GR      A+AG  ++A   R D +K + DEI   G  GS ++V 
Sbjct: 29  LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWG-RTDGVKEVADEIADGG--GSAEAVV 85
Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           A   +L+  A+ A  E++  +      RVD LVNNAGI
Sbjct: 86  ADLADLEGAANVAE-ELAATR------RVDVLVNNAGI 116

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 9/100 (9%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAG---CRIVAAARRVDRLKSLCDEINKPGMVGSPD 71
           L +K V++TGAS+G+G+   L+  +A     +++ AARR+++L+ L   I++      P+
Sbjct: 31  LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQE----FPN 86
Query: 72  SVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           +   VA +LD+      I+  ++   + F  +D LVNNAG
Sbjct: 87  AKVHVA-QLDIT-QAEKIKPFIENLPQEFKDIDILVNNAG 124

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           LN+++++VTGAS G+GRE  +  A+ G  ++   R  ++L+ +   IN+     +    +
Sbjct: 8   LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEE----TGRQPQ 63
Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
              ++L  C      +++ Q+    + R+D +++NAG+ G+
Sbjct: 64  WFILDLLTCTSENCQQLA-QRIVVNYPRLDGVLHNAGLLGD 103

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 21/112 (18%)
Query: 6   SDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI--NK 63
           S+ +  + +L  KV +VTGAS G+G+     LA+ G +++  A      +++ D +  N 
Sbjct: 1   SNAMSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG 60
Query: 64  PGM---VGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            GM   V +P+S+ AV                ++   + FG VD LVNNA I
Sbjct: 61  KGMALNVTNPESIEAV----------------LKAITDEFGGVDILVNNAAI 96

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 12/102 (11%)
Query: 16  NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMV--GSPDSV 73
           + +V +VTGA+SG+G E    L K G R+   AR  + L++   E+ + G+   G    V
Sbjct: 21  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDV 80
Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
           R+V            IE  V    E +G VD LVNNAG  G 
Sbjct: 81  RSV----------PEIEALVAAVVERYGPVDVLVNNAGRPGG 112

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 12/102 (11%)
Query: 16  NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMV--GSPDSV 73
           + +V +VTGA+SG+G E    L K G R+   AR  + L++   E+ + G+   G    V
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDV 84
Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
           R+V            IE  V    E +G VD LVNNAG  G 
Sbjct: 85  RSV----------PEIEALVAAVVERYGPVDVLVNNAGRPGG 116

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 16  NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMV--GSPDSV 73
           + +V +VTGA+SG+G E    L K G R+   AR  + L++   E+ + G+   G    V
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDV 84
Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           R+V            IE  V    E +G VD LVNNAG
Sbjct: 85  RSV----------PEIEALVAAVVERYGPVDVLVNNAG 112

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 16  NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMV--GSPDSV 73
           + +V +VTGA+SG+G E    L K G R+   AR  + L++   E+ + G+   G    V
Sbjct: 21  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDV 80
Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           R+V            IE  V    E +G VD LVNNAG
Sbjct: 81  RSV----------PEIEALVAAVVERYGPVDVLVNNAG 108

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 12/102 (11%)
Query: 16  NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMV--GSPDSV 73
           + +V +VTGA+SG+G E    L K G R+   AR  + L++   E+ + G+   G    V
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDV 84
Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
           R+V            IE  V    E +G VD LVNNAG  G 
Sbjct: 85  RSV----------PEIEALVAAVVERYGPVDVLVNNAGRPGG 116

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 16  NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMV--GSPDSV 73
           + +V +VTGA+SG+G E    L K G R+   AR  + L++   E+ + G+   G    V
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDV 84
Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           R+V            IE  V    E +G VD LVNNAG
Sbjct: 85  RSV----------PEIEALVAAVVERYGPVDVLVNNAG 112

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 16  NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMV--GSPDSV 73
           + +V +VTGA+SG+G E    L K G R+   AR  + L++   E+ + G+   G    V
Sbjct: 5   DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDV 64
Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           R+V            IE  V    E +G VD LVNNAG
Sbjct: 65  RSV----------PEIEALVAAVVERYGPVDVLVNNAG 92

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 16  NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMV--GSPDSV 73
           + +V +VTGA+SG+G E    L K G R+   AR  + L++   E+ + G+   G    V
Sbjct: 25  DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDV 84
Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           R+V            IE  V    E +G VD LVNNAG
Sbjct: 85  RSV----------PEIEALVAAVVERYGPVDVLVNNAG 112

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 5   VSDHLEPWHDL-NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINK 63
           +S H +P  DL   ++++VTGAS G+GRE  L  A+ G  ++   R  ++L+ +   I  
Sbjct: 1   MSLHYQPKQDLLQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIAD 60
Query: 64  PGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
              V      +   ++L  C      +++ + A   + R+D +++NAG+ G
Sbjct: 61  EQHV----QPQWFTLDLLTCTAEECRQVADRIA-AHYPRLDGVLHNAGLLG 106

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           +N +V +VTGAS G+GR   L L KAG  +    R +D L+ +  E    G        +
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGG-------Q 55
Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
            V V  D   +     +  Q   E  GR+D LVNNA
Sbjct: 56  CVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNA 91

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 13  HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDS 72
            DL  +V +VTG S GLG      LA+AGC +V A+R ++       ++ +         
Sbjct: 17  FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTE------KYG 70
Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           V  +A   DV ++   ++  ++   E FG++D +VN AGI
Sbjct: 71  VETMAFRCDV-SNYEEVKKLLEAVKEKFGKLDTVVNAAGI 109

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 21/112 (18%)
Query: 6   SDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI--NK 63
           S+ +  + +L  KV +VTGAS G+G+     LA+ G +++  A      +++ D +  N 
Sbjct: 1   SNAMSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG 60
Query: 64  PGM---VGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            GM   V +P+S+ AV                ++   + FG VD LVNNA I
Sbjct: 61  KGMALNVTNPESIEAV----------------LKAITDEFGGVDILVNNADI 96

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L+++V +VTGAS G+GR   L+LA+ G  ++  A      + +     + G+ G     R
Sbjct: 26  LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEG-----R 80
Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
              + ++   D   ++  V+   + FG ++ LVNNAGI
Sbjct: 81  GAVLNVN---DATAVDALVESTLKEFGALNVLVNNAGI 115

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 8   HLEPWHDL-NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGM 66
           H +P  DL   ++++VTGAS G+GRE  L  A+ G  ++   R  ++L+ +   I     
Sbjct: 5   HYQPKQDLLQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQH 64
Query: 67  VGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
           V      +   ++L  C      +++ + A   + R+D +++NAG+ G
Sbjct: 65  V----QPQWFTLDLLTCTAEECRQVADRIA-AHYPRLDGVLHNAGLLG 107

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  KV ++TGASSG+G      LA  G  +  AARRV++L++L DE+   G        +
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG-------AK 57
Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
              +ELDV AD   ++ +V    EA G +D LVNNAGI
Sbjct: 58  VHVLELDV-ADRQGVDAAVASTVEALGGLDILVNNAGI 94

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  KV ++TGASSG+G      LA  G  +  AARRV++L++L DE+   G        +
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG-------AK 57
Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
              +ELDV AD   ++ +V    EA G +D LVNNAGI
Sbjct: 58  VHVLELDV-ADRQGVDAAVASTVEALGGLDILVNNAGI 94

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
             + +TGA+SG G       A+AG  +V   RR +RL++L  E++           R + 
Sbjct: 22  STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSA--------KTRVLP 73
Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           + LDV  D A    +V    E F  +  L+NNAG+
Sbjct: 74  LTLDV-RDRAAXSAAVDNLPEEFATLRGLINNAGL 107

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 21/106 (19%)
Query: 12  WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGM----- 66
           + +L  KV +VTGAS G+G+     LA+ G +++  A      +++ D +   G      
Sbjct: 4   FXNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGXALN 63
Query: 67  VGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           V +P+S+ AV                ++   + FG VD LVNNAGI
Sbjct: 64  VTNPESIEAV----------------LKAITDEFGGVDILVNNAGI 93

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 20  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVE 79
           V +TGAS G+G+   L  AK G  IV AA+       L   I            +A+   
Sbjct: 48  VFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCI 107
Query: 80  LDVCADGATIEISVQKAWEAFGRVDALVNNA 110
           +DV  D   I  +V+KA + FG +D LVNNA
Sbjct: 108 VDV-RDEQQISAAVEKAIKKFGGIDILVNNA 137

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 13  HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD---RLKSLCDEINKPGMVGS 69
           H +N KV +VTGA+ G+GR F   L   G ++      ++   + K+   E  +P     
Sbjct: 3   HMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQ---- 58
Query: 70  PDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIR 113
               + + ++ DV AD   +  + +K  + FGR+D LVNNAG+ 
Sbjct: 59  ----KTLFIQCDV-ADQQQLRDTFRKVVDHFGRLDILVNNAGVN 97

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 22/108 (20%)
Query: 13  HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDS 72
            DL  +  +VTG+S GLGR     LA AG RI+       R+     E    G       
Sbjct: 22  FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGH------ 75
Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGR-------VDALVNNAGIR 113
             A AV  DV ++   I        EAF R       VD LVNNAGI+
Sbjct: 76  -DAEAVAFDVTSESEII--------EAFARLDEQGIDVDILVNNAGIQ 114

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 13/105 (12%)
Query: 12  WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD---EINKPGMVG 68
           + DL +KVV++TG S+GLGR   +   +   ++V      +  +   D   E+ + G   
Sbjct: 10  YTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVV--INYYNNEEEALDAKKEVEEAGG-- 65
Query: 69  SPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIR 113
                +A+ V+ DV  +   + + VQ A + FG +D ++NNAG+ 
Sbjct: 66  -----QAIIVQGDVTKEEDVVNL-VQTAIKEFGTLDVMINNAGVE 104

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 13/105 (12%)
Query: 12  WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD---EINKPGMVG 68
           + DL +KVV++TG S+GLGR   +   +   ++V      +  +   D   E+ + G   
Sbjct: 10  YTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVV--INYYNNEEEALDAKKEVEEAGG-- 65
Query: 69  SPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIR 113
                +A+ V+ DV  +   + + VQ A + FG +D ++NNAG+ 
Sbjct: 66  -----QAIIVQGDVTKEEDVVNL-VQTAIKEFGTLDVMINNAGVE 104

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 13/105 (12%)
Query: 12  WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD---EINKPGMVG 68
           + DL +KVV++TG S+GLGR   +   +   ++V      +  +   D   E+ + G   
Sbjct: 10  YTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVV--INYYNNEEEALDAKKEVEEAGG-- 65
Query: 69  SPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIR 113
                +A+ V+ DV  +   + + VQ A + FG +D ++NNAG+ 
Sbjct: 66  -----QAIIVQGDVTKEEDVVNL-VQTAIKEFGTLDVMINNAGVE 104

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L+ +V +VTGAS G+G      L   G R+V  AR V++L+++  EI   G  G  +S  
Sbjct: 27  LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG--GEAESHA 84
Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                 D  A  AT  ++      A GR D LVNNAG+
Sbjct: 85  CDLSHSDAIAAFATGVLA------AHGRCDVLVNNAGV 116

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 19  VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAV 78
           V ++TGA SG+GR   L LA  G  + A  R    ++ + DEI   G        +A+A+
Sbjct: 30  VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGG-------QAIAL 82
Query: 79  ELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
           E DV +D      +V+     FG +D +V NAGI G
Sbjct: 83  EADV-SDELQXRNAVRDLVLKFGHLDIVVANAGING 117

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 18/109 (16%)
Query: 6   SDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPG 65
           SD+L     L+ K  ++TGA +G+G+E  +  A AG  +V +    D    + DEI + G
Sbjct: 4   SDNLR----LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG 59
Query: 66  MVGSPDSVRAVAVELDVCAD---GATIEISVQKAWEAFGRVDALVNNAG 111
                   +A A   D+ ++    A  + ++ K     G+VD LVNNAG
Sbjct: 60  G-------QAFACRCDITSEQELSALADFAISK----LGKVDILVNNAG 97

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 13/98 (13%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L +K V++TGA+ G+GR      AK G R+VA           CD I +  +  + ++V 
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVA-----------CD-IEEGPLREAAEAVG 50
Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           A  V  DV AD A++E    +A    GR+D +V+ AGI
Sbjct: 51  AHPVVXDV-ADPASVERGFAEALAHLGRLDGVVHYAGI 87

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 20/107 (18%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV- 73
            + +VV+VTGA +GLGR + L  A+ G  +V     V+ L      + K  +  + D V 
Sbjct: 28  FDGRVVLVTGAGAGLGRAYALAFAERGALVV-----VNDLGGDFKGVGKGSL--AADKVV 80
Query: 74  --------RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                   +AVA   D   +G  +   V+ A +AFGR+D +VNNAGI
Sbjct: 81  EEIRRRGGKAVA-NYDSVEEGEKV---VKTALDAFGRIDVVVNNAGI 123

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 48/103 (46%), Gaps = 20/103 (19%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVA-----AARRVDRLKSLCDEINKPGMVGS 69
           L+ KV +VTGA+ G+G       A+ G  +VA     AA  + R+               
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVA-------------- 256
Query: 70  PDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            D V   A+ LDV AD A  +I+        G+VD LVNNAGI
Sbjct: 257 -DKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGI 298

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L +KV  +TG  SG+G        + GC  V A+R + R+ +   ++   G  G     R
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLA--GATGR----R 78
Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
            + + +DV A  A +  +V +A + FGR+D L+N A
Sbjct: 79  CLPLSMDVRAPPAVMA-AVDQALKEFGRIDILINCA 113

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 50/114 (43%), Gaps = 30/114 (26%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIV----------AAARRVDRLKSLCDEINKP 64
           ++ +VV+VTGA  G+GR   L  A  G R+V          + A      +S+ DEI   
Sbjct: 25  VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA 84
Query: 65  GMVGSPDSVRAVAVELDVCADGATI------EISVQKAWEAFGRVDALVNNAGI 112
           G               +  ADG+ +         +Q A E FG +D LVNNAGI
Sbjct: 85  GG--------------EAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGI 124

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-LKSLCDEINKPGMVGSPDSV 73
           L  K  +VTG+S GLG+     L   G  IV         L +  +E    G       +
Sbjct: 3   LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAG-------I 55
Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             V  + DV  +   +E  V+ A +AFGR+D LVNNAGI
Sbjct: 56  NVVVAKGDV-KNPEDVENMVKTAMDAFGRIDILVNNAGI 93

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 14/103 (13%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIV----AAARRVDRLKSLCDEINKPGMVGSP 70
           L  K  +VTG++SG+G     +LAKAG  +V         ++R +S  +         S 
Sbjct: 2   LKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLE---------SK 52
Query: 71  DSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIR 113
             V+A  +  D+    AT +  + KA EA G +D LVNNAGI+
Sbjct: 53  FGVKAYYLNADLSDAQATRDF-IAKAAEALGGLDILVNNAGIQ 94

>pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From Sinorhizobium Meliloti Length = 324

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 16  NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRA 75
           ++K++++TGASSG GR     LA AG R+ A+ R  D +      +         + V  
Sbjct: 4   SKKIILITGASSGFGRLTAEALAGAGHRVYASXR--DIVGRNASNVEAIAGFARDNDVDL 61
Query: 76  VAVELDVCADGATIEISVQKAWEAF----GRVDALVNNAG 111
             +ELDV +     ++SV +A +      GR+D L++NAG
Sbjct: 62  RTLELDVQS-----QVSVDRAIDQIIGEDGRIDVLIHNAG 96

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Query: 13  HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDS 72
            DL  K  +VTG++ GLG  +   LA AG R++    R   L    D + + G       
Sbjct: 5   FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGY------ 58
Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIR 113
             A  V  DV  D   IE +  K       VD L+NNAGI+
Sbjct: 59  -DAHGVAFDVT-DELAIEAAFSKLDAEGIHVDILINNAGIQ 97

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 24/109 (22%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIV---------AAARRVDRLKSLCDEINKPG 65
            + +VV+VTGA  GLGR + L  A+ G  +V            +       + +EI + G
Sbjct: 7   FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG 66
Query: 66  --MVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
              V + DSV A              E  V+ A + FGR+D +VNNAGI
Sbjct: 67  GKAVANYDSVEAG-------------EKLVKTALDTFGRIDVVVNNAGI 102

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           KV MVTG + G+GR     LA  G  I A A    + +   + I    ++ + D  +AV 
Sbjct: 3   KVAMVTGGAQGIGRGISEKLAADGFDI-AVADLPQQEEQAAETIK---LIEAADQ-KAVF 57
Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           V LDV  D A  + ++ +A E  G  D LVNNAGI
Sbjct: 58  VGLDVT-DKANFDSAIDEAAEKLGGFDVLVNNAGI 91

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVA-----AARRVDRLKSLCDEINKPGMVGS 69
           L  KV  +TGA+ G GR   + LA+ G  IVA         +D  +   +E+ +   +  
Sbjct: 44  LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE 103
Query: 70  PDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               R +A + DV  D A+++  V +A   FG +D LV+N GI
Sbjct: 104 EQGRRIIARQADV-RDLASLQAVVDEALAEFGHIDILVSNVGI 145

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 19/101 (18%)
Query: 13  HDLNE-KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPD 71
           HD+   + V+VTG SSG+G    +  A+ G  +VA     D              V +P 
Sbjct: 6   HDIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADG-------------VHAPR 52
Query: 72  SVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             R    ELD+     T    +Q+ +EA  R+D LVNNAGI
Sbjct: 53  HPRIRREELDI-----TDSQRLQRLFEALPRLDVLVNNAGI 88

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 31/107 (28%)
Query: 12  WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIV------AAARRVDRLKSLCDEINKPG 65
           + DL +KVV+VTGAS G+GR         G +++          + D ++  CD      
Sbjct: 3   FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDHIE--CD------ 54
Query: 66  MVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            V +PD V+A                S+   ++ +G +  LVNNAGI
Sbjct: 55  -VTNPDQVKA----------------SIDHIFKEYGSISVLVNNAGI 84

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 19  VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAV 78
           +V+VTGA++G G        + G +++A  RR +RL+ L DE+     +   D     A+
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAI 61
Query: 79  ELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           E ++ A       S+   W     +D LVNNAG+
Sbjct: 62  E-EMLA-------SLPAEW---CNIDILVNNAGL 84

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 27/102 (26%)
Query: 16  NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-----LKSLCDEINKPGMVGSP 70
            +KVV++TGAS G+G            R+VA +R +       + ++  +I+KP      
Sbjct: 27  QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPDIHTVAGDISKP------ 80
Query: 71  DSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                            T +  V++  E FGR+D+LVNNAG+
Sbjct: 81  ----------------ETADRIVREGIERFGRIDSLVNNAGV 106

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 31/107 (28%)
Query: 12  WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIV------AAARRVDRLKSLCDEINKPG 65
           + DL +KVV+VTGAS G+GR         G +++          + D ++  CD      
Sbjct: 10  FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDHIE--CD------ 61
Query: 66  MVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            V +PD V+A                S+   ++ +G +  LVNNAGI
Sbjct: 62  -VTNPDQVKA----------------SIDHIFKEYGSISVLVNNAGI 91

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 13  HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDS 72
            DL  + V+VTG + G+GR      A+AG  +  A R    + +   ++++ G      S
Sbjct: 6   FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG------S 59
Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            + + V+ DV +D A  +    +A E FG +D +  NAG+
Sbjct: 60  GKVIGVQTDV-SDRAQCDALAGRAVEEFGGIDVVCANAGV 98

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 20  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVE 79
           V++TGAS G+G      L   G R+   AR   RL++L  E+   G +  P  VR    E
Sbjct: 8   VLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE--GALPLPGDVRE---E 62
Query: 80  LDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            D     A +E       EAFG + ALVNNAG+
Sbjct: 63  GDWARAVAAME-------EAFGELSALVNNAGV 88

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 21/104 (20%)
Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINK-----PGMVG 68
           DL  +  +VTGA+ GLG      L   G  +     R ++LK L  E+ +     P  + 
Sbjct: 7   DLTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIFVFPANLS 66
Query: 69  SPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             ++V+A+                 QKA E  G VD LVNNAGI
Sbjct: 67  DREAVKALG----------------QKAEEEMGGVDILVNNAGI 94

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 21/104 (20%)
Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINK-----PGMVG 68
           DL  +  +VTGA+ GLG      L   G  +     R ++LK L  E+ +     P  + 
Sbjct: 4   DLTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIFVFPANLS 63
Query: 69  SPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             ++V+A+                 QKA E  G VD LVNNAGI
Sbjct: 64  DREAVKALG----------------QKAEEEMGGVDILVNNAGI 91

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  KV ++TGA SG G       AK G ++V     VDR K+  + +   G +G  D+  
Sbjct: 7   LEGKVALITGAGSGFGEGMAKRFAKGGAKVVI----VDRDKAGAERVA--GEIG--DAAL 58
Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           AVA ++   +  A ++ +V+ A   FG+VD LVNNAGI
Sbjct: 59  AVAADI---SKEADVDAAVEAALSKFGKVDILVNNAGI 93

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           KV +VTGA  G+GRE    LAK+   ++  +R      S+ DEI   G   S        
Sbjct: 45  KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESS-------G 97
Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
              DV       E+ + K       VD LVNNAGI
Sbjct: 98  YAGDVSKKEEISEV-INKILTEHKNVDILVNNAGI 131

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 7   DHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGM 66
            H+ P+  L  ++ +VTG S G+G+     L +AG R+   AR  +        ++  G 
Sbjct: 19  SHMHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG- 77
Query: 67  VGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
                     A+  D+ ++     ++ Q   E   R+D LVNNAG
Sbjct: 78  -------DCQAIPADLSSEAGARRLA-QALGELSARLDILVNNAG 114

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  KV +VTGAS G+G+   L+L + G  ++  A      + + + +   G+ G+    
Sbjct: 24  SLQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGA---- 79
Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               + LDV +D  ++  +++   +  G+   +VNNAGI
Sbjct: 80  ---GLVLDVSSD-ESVAATLEHIQQHLGQPLIVVNNAGI 114

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 21  MVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVEL 80
           +VTG + G+G E C  L+  G  +V   R V +     +++       + +    V  +L
Sbjct: 16  VVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLK------NSNHENVVFHQL 69
Query: 81  DVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
           DV    AT+          FG++D LVNNAG+ G
Sbjct: 70  DVTDPIATMSSLADFIKTHFGKLDILVNNAGVAG 103

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+ +     + G      S  
Sbjct: 29  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG----AASAH 84
Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNN 109
            +A  ++   D    E  V +A +  G +D L+ N
Sbjct: 85  YIAGTME---DMTFAEQFVAQAGKLMGGLDMLILN 116

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 22/111 (19%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI-NKPGMVGSPDSV 73
           L  KV  +TGA+ G GR   + LA  G  I+A    VD    LCD+I + P  + +P+ +
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADIIA----VD----LCDQIASVPYPLATPEEL 62
Query: 74  ------------RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                       R VA + DV  D  ++  ++Q   +  GR+D +V NAGI
Sbjct: 63  AATVKLVEDIGSRIVARQADV-RDRESLSAALQAGLDELGRLDIVVANAGI 112

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+ +     + G      S  
Sbjct: 26  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG----AASAH 81
Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNN 109
            +A  ++   D    E  V +A +  G +D L+ N
Sbjct: 82  YIAGTME---DMTFAEQFVAQAGKLMGGLDMLILN 113

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           L  K   VTG S G+G      LA  G  + +      +R +++  EI + G        
Sbjct: 29  LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGG------- 81
Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           RAVA+  D   D   IE ++++  EA G +D LVN+AGI
Sbjct: 82  RAVAIRAD-NRDAEAIEQAIRETVEALGGLDILVNSAGI 119

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  K  +VTG+++G+G+     L   G  ++   RR + +     EI        PD  
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIR----AQYPD-- 60
Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
              A+   V AD  T E   Q   E + +VD L+NN GI
Sbjct: 61  ---AILQPVVADLGT-EQGCQDVIEKYPKVDILINNLGI 95

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE 60
          L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+ +   
Sbjct: 22 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSH 67

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK---SLCDEI 61
          L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+   S C E+
Sbjct: 13 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL 62

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK---SLCDEI 61
          L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+   S C E+
Sbjct: 32 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL 81

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK---SLCDEI 61
          L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+   S C E+
Sbjct: 7  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL 56

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE 60
          L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+ +   
Sbjct: 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSH 57

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE 60
          L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+ +   
Sbjct: 26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSH 71

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE 60
          L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+ +   
Sbjct: 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSH 57

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE 60
          L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+ +   
Sbjct: 15 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSH 60

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK---SLCDEI 61
          L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+   S C E+
Sbjct: 32 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL 81

>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 3  SQVSDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC 58
          S +++   P   L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+ + 
Sbjct: 19 SHMNEKFRP-EMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVV 73

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  K  +VTG++SG+G      LA+AG  IV      D   +L  EI + G       V+
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFG-DPAPALA-EIARHG-------VK 52
Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIR 113
           AV    D+ +D A IE     A   FG VD LVNNAGI+
Sbjct: 53  AVHHPADL-SDVAQIEALFALAEREFGGVDILVNNAGIQ 90

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           +V +VTGASSG G          G R+ A    +D      +E  +       D V  + 
Sbjct: 3   RVAIVTGASSGNGLAIATRFLARGDRVAA----LDLSAETLEETARTHWHAYADKV--LR 56
Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
           V  DV AD   +  ++    E FG +D LVNNAGI GN
Sbjct: 57  VRADV-ADEGDVNAAIAATMEQFGAIDVLVNNAGITGN 93

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L+ K  ++TG++ G+GR F     + G R+  A   ++  ++   EI             
Sbjct: 3   LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPA---------- 52
Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           A A+ LDV  D A+I+  V +  + +G +D LVNNA +
Sbjct: 53  ACAIALDVT-DQASIDRCVAELLDRWGSIDILVNNAAL 89

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 21  MVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVGSPDSVRAVAVE 79
           +VTGA+  +GR   + L + G R+V       +   SL DE+NK        S  AV  +
Sbjct: 27  VVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE------RSNTAVVXQ 80
Query: 80  LDVCADG---ATIEISVQKAWEAFGRVDALVNNA 110
            D+       A+ E  +   + AFGR D LVNNA
Sbjct: 81  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNA 114

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVA-AARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
           K  +VTG+S G+G+   + LA+ G  IV   AR         +EI K G       V+ +
Sbjct: 5   KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLG-------VKVL 57
Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
            V+ +V    A I+   Q+  E FGR+D  VNNA
Sbjct: 58  VVKANV-GQPAKIKEMFQQIDETFGRLDVFVNNA 90

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 21  MVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVGSPDSVRAVAVE 79
           +VTGA+  +GR   + L + G R+V       +   SL DE+NK        S  AV  +
Sbjct: 27  VVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE------RSNTAVVXQ 80
Query: 80  LDVCADG---ATIEISVQKAWEAFGRVDALVNNA 110
            D+       A+ E  +   + AFGR D LVNNA
Sbjct: 81  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNA 114

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 16  NEKVVMVTGASSGLGREFCLDLAKAGCRIVA-AARRVDRLKSLCDEINKPGMVGSPDSVR 74
             KV +VTGAS G+G      LA  G  +V   A +    + +  +I   G        +
Sbjct: 26  TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGG-------K 78
Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           A+  + DV  D A +      A EAFG VD LVNNAGI
Sbjct: 79  ALTAQADVS-DPAAVRRLFATAEEAFGGVDVLVNNAGI 115

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 21  MVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVGSPDSVRAVAVE 79
           +VTGA+  +GR   + L + G R+V       +   SL DE+NK        S  AV  +
Sbjct: 7   VVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE------RSNTAVVXQ 60
Query: 80  LDVCADG---ATIEISVQKAWEAFGRVDALVNNA 110
            D+       A+ E  +   + AFGR D LVNNA
Sbjct: 61  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNA 94

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 21  MVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVGSPDSVRAVAVE 79
           +VTGA+  +GR   + L + G R+V       +   SL DE+NK        S  AV  +
Sbjct: 7   VVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE------RSNTAVVXQ 60
Query: 80  LDVCADG---ATIEISVQKAWEAFGRVDALVNNA 110
            D+       A+ E  +   + AFGR D LVNNA
Sbjct: 61  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNA 94

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 20  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVE 79
           V+VTG   G+G++ CLD  +AG ++      +D  +S      +P +      V      
Sbjct: 5   VIVTGGGHGIGKQICLDFLEAGDKVCFI--DIDEKRSADFAKERPNLFYFHGDV------ 56
Query: 80  LDVCADGATIEISVQKAWEAFGRVDALVNNA 110
               AD  T++  V+ A E   R+D LVNNA
Sbjct: 57  ----ADPLTLKKFVEYAMEKLQRIDVLVNNA 83

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 21  MVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVGSPDSVRAVAVE 79
           +VTGA+  +GR   + L + G R+V       +   SL DE+NK        S  AV  +
Sbjct: 27  VVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE------RSNTAVVCQ 80
Query: 80  LDVCADG---ATIEISVQKAWEAFGRVDALVNNA 110
            D+       A+ E  +   + AFGR D LVNNA
Sbjct: 81  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNA 114

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 21  MVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVGSPDSVRAVAVE 79
           +VTGA+  +GR   + L + G R+V       +   SL DE+NK        S  AV  +
Sbjct: 27  VVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE------RSNTAVVCQ 80
Query: 80  LDVCADG---ATIEISVQKAWEAFGRVDALVNNA 110
            D+       A+ E  +   + AFGR D LVNNA
Sbjct: 81  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNA 114

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           L  KV +VTGA  G+GRE  ++L + GC+ IV  A   +  + +   I K G        
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG-----SDA 81
Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             V   + V  D   I    ++A + FG++D + +N+G+
Sbjct: 82  ACVKANVGVVED---IVRMFEEAVKIFGKLDIVCSNSGV 117

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 21  MVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVGSPDSVRAVAVE 79
           +VTGA+  +GR   + L + G R+V       +   SL DE+NK        S  AV  +
Sbjct: 7   VVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE------RSNTAVVCQ 60
Query: 80  LDVCADG---ATIEISVQKAWEAFGRVDALVNNA 110
            D+       A+ E  +   + AFGR D LVNNA
Sbjct: 61  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNA 94

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           L  KV +VTGA  G+GRE  ++L + GC+ IV  A   +  + +   I K G        
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG-----SDA 81
Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             V   + V  D   I    ++A + FG++D + +N+G+
Sbjct: 82  ACVKANVGVVED---IVRMFEEAVKIFGKLDIVCSNSGV 117

>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC 58
          L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+ + 
Sbjct: 9  LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVV 52

>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC 58
          L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+ + 
Sbjct: 9  LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVV 52

>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK 55
          L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+
Sbjct: 7  LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQ 47

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 11/105 (10%)
Query: 8   HLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMV 67
           H+    DL+ +  +VTG S G+G      L KAG  +  A   V   +++   +   G  
Sbjct: 3   HMAGIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGF- 61
Query: 68  GSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                    AVE+DV    A+++ ++QKA +A G  D L  NAG+
Sbjct: 62  ---------AVEVDVTKR-ASVDAAMQKAIDALGGFDLLCANAGV 96

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
              KV +VTG+  G+G+ +   LA+ G  +V A    +  +++  +I         D   
Sbjct: 7   FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQI-------VADGGT 59
Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
           A++V +DV +D  + +    +    FG +D LVNNA I G
Sbjct: 60  AISVAVDV-SDPESAKAMADRTLAEFGGIDYLVNNAAIFG 98

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 17  EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINK-PGMVGSPDSVRA 75
           EKVV++TG SSG G+      AK G R+V   R  ++L+    EI + PG +        
Sbjct: 6   EKVVIITGGSSGXGKGXATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQI-------- 57
Query: 76  VAVELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
           + V+ DV  +   I+  +++  E FGR+D L+NNA
Sbjct: 58  LTVQXDV-RNTDDIQKXIEQIDEKFGRIDILINNA 91

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 27/108 (25%)
Query: 13  HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDS 72
           +DL+ K V++TG + GLG E       AG R+V           L D +++ G       
Sbjct: 1   NDLSGKTVIITGGARGLGAEAARQAVAAGARVV-----------LADVLDEEGA------ 43
Query: 73  VRAVAVELDVCADGATIEISVQKAW--------EAFGRVDALVNNAGI 112
             A A EL   A    +++++++ W        E FG VD LVNNAGI
Sbjct: 44  --ATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGI 89

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPG-MVGSPDSV 73
           L  +V ++TG +SGLGR         G R+    +  +RL+ L  E+   G  VG    V
Sbjct: 3   LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLREL--EVAHGGNAVGVVGDV 60
Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           R++  +          + + ++   AFG++D L+ NAGI
Sbjct: 61  RSLQDQ----------KRAAERCLAAFGKIDTLIPNAGI 89

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 27/108 (25%)
Query: 13  HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDS 72
           +DL+ K V++TG + GLG E       AG R+V           L D +++ G       
Sbjct: 1   NDLSGKTVIITGGARGLGAEAARQAVAAGARVV-----------LADVLDEEGA------ 43
Query: 73  VRAVAVELDVCADGATIEISVQKAW--------EAFGRVDALVNNAGI 112
             A A EL   A    +++++++ W        E FG VD LVNNAGI
Sbjct: 44  --ATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGI 89

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L+ KV +VTGA+ G+G       A+ G  +VA    +D ++S  + + +     +   V 
Sbjct: 219 LDGKVAIVTGAARGIGATIAEVFARDGAHVVA----ID-VESAAENLAE-----TASKVG 268
Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             A+ LDV AD A  +IS        G+ D LVNNAGI
Sbjct: 269 GTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGI 306

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L+ KV +VTGA+ G+G       A+ G  +VA    +D ++S  + + +     +   V 
Sbjct: 232 LDGKVAIVTGAARGIGATIAEVFARDGAHVVA----ID-VESAAENLAE-----TASKVG 281
Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             A+ LDV AD A  +IS        G+ D LVNNAGI
Sbjct: 282 GTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGI 319

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L+ KV +VTGA+ G+G       A+ G  +VA    +D ++S  + + +     +   V 
Sbjct: 211 LDGKVAIVTGAARGIGATIAEVFARDGAHVVA----ID-VESAAENLAE-----TASKVG 260
Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             A+ LDV AD A  +IS        G+ D LVNNAGI
Sbjct: 261 GTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGI 298

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L+ KV +VTGA+ G+G       A+ G  +VA    +D ++S  + + +     +   V 
Sbjct: 203 LDGKVAIVTGAARGIGATIAEVFARDGAHVVA----ID-VESAAENLAE-----TASKVG 252
Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             A+ LDV AD A  +IS        G+ D LVNNAGI
Sbjct: 253 GTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGI 290

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 28/115 (24%)
Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           D   K  ++TG + G+GR   + LA+AG  I           ++CD      +VG P + 
Sbjct: 7   DFEGKTALITGGARGMGRSHAVALAEAGADI-----------AICDRCENSDVVGYPLAT 55
Query: 74  ----------------RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                           R ++ ++DV  D A +E  V +A +  G +D  + NAGI
Sbjct: 56  ADDLAETVALVEKTGRRCISAKVDV-KDRAALESFVAEAEDTLGGIDIAITNAGI 109

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L+ KV +VTGA+ G+G       A+ G  +VA    +D ++S  + + +     +   V 
Sbjct: 195 LDGKVAIVTGAARGIGATIAEVFARDGAHVVA----ID-VESAAENLAE-----TASKVG 244
Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             A+ LDV AD A  +IS        G+ D LVNNAGI
Sbjct: 245 GTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGI 282

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 19  VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPG-MVGSPDSVRAVA 77
           + ++TGAS G+G      LA  G R+V  AR    L+ + DEI +    V  P     + 
Sbjct: 9   LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEP-----IV 63
Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
           + LD+  D    +  ++   + +G VD LVN A
Sbjct: 64  LPLDI-TDCTKADTEIKDIHQKYGAVDILVNAA 95

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
           K V++TGAS G+G E    LA  G ++ +      +   +L +E+ + G        +A 
Sbjct: 30  KNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKG-------YKAA 82
Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            ++ D  ++   IE ++Q   ++ G +  LVNNAG+
Sbjct: 83  VIKFDAASESDFIE-AIQTIVQSDGGLSYLVNNAGV 117

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L +++ +VTGAS G+GR   L+LA AG ++           S     ++     +     
Sbjct: 26  LTDRIALVTGASRGIGRAIALELAAAGAKVAV------NYASSAGAADEVVAAIAAAGGE 79
Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           A AV+ DV  + + +E       E +GR+D LVNNAGI
Sbjct: 80  AFAVKADVSQE-SEVEALFAAVIERWGRLDVLVNNAGI 116

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVA------AARRVDRLKSLCDEINKPGMVG 68
           L  +V  +TGA+ G GR   + LA  G  I+A       +  V    +  +++++   + 
Sbjct: 13  LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV 72
Query: 69  SPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                +A+   LDV  D A  E+ V    E FGR+D +V NAG+
Sbjct: 73  EDQGRKALTRVLDVRDDAALREL-VADGMEQFGRLDVVVANAGV 115

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	115
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	4e-29
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	1e-28
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	3e-28
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	6e-28
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	7e-28
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	9e-28
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	4e-27
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	5e-27
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	1e-26
3imf_A	257	Short chain dehydrogenase; structural genomics, in	2e-26
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	4e-26
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	5e-26
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	3e-25
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	4e-25
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	7e-25
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	7e-25
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	8e-25
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	8e-25
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	1e-24
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	1e-24
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	2e-24
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	2e-24
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	2e-24
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	3e-24
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	4e-24
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	4e-24
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	5e-24
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	5e-24
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	7e-24
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	7e-24
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	1e-23
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	1e-23
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	1e-23
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	1e-23
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	2e-23
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	3e-23
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	3e-23
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	3e-23
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	3e-23
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	3e-23
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-23
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	4e-23
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	5e-23
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	7e-23
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	7e-23
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-23
3cxt_A	291	Dehydrogenase with different specificities; rossma	8e-23
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	1e-22
1xkq_A	280	Short-chain reductase family member (5D234); parra	1e-22
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	1e-22
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	1e-22
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	2e-22
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	2e-22
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	2e-22
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	2e-22
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	2e-22
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	2e-22
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	2e-22
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	3e-22
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	3e-22
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	3e-22
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	5e-22
1spx_A	278	Short-chain reductase family member (5L265); paral	7e-22
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	7e-22
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	7e-22
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	8e-22
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	9e-22
3rih_A	293	Short chain dehydrogenase or reductase; structural	1e-21
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	1e-21
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	1e-21
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	1e-21
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	1e-21
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	1e-21
1xhl_A	297	Short-chain dehydrogenase/reductase family member	1e-21
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	2e-21
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-21
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	2e-21
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	3e-21
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	3e-21
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	4e-21
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	4e-21
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	4e-21
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	5e-21
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	6e-21
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	6e-21
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	7e-21
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	7e-21
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	9e-21
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	9e-21
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	9e-21
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	1e-20
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	2e-20
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	2e-20
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	2e-20
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	2e-20
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	2e-20
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	2e-20
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	3e-20
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	3e-20
1xq1_A	266	Putative tropinone reducatse; structural genomics,	3e-20
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	3e-20
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	3e-20
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	4e-20
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	4e-20
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	5e-20
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	5e-20
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	9e-20
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	9e-20
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	1e-19
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	1e-19
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	2e-19
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	2e-19
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	2e-19
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	2e-19
4dqx_A	277	Probable oxidoreductase protein; structural genomi	2e-19
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	2e-19
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	2e-19
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	3e-19
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	3e-19
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	3e-19
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	3e-19
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	4e-19
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	7e-19
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-19
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	7e-19
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	7e-19
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	9e-19
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	9e-19
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	1e-18
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	1e-18
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-18
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	2e-18
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	2e-18
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	2e-18
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	3e-18
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	3e-18
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	4e-18
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	4e-18
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	5e-18
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	5e-18
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	6e-18
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	7e-18
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	7e-18
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	8e-18
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	8e-18
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	9e-18
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-17
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-15
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	1e-17
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	1e-17
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	1e-17
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	2e-17
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	2e-17
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	2e-17
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	2e-17
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	3e-17
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	3e-17
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	3e-17
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	3e-17
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	3e-17
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	3e-17
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	3e-17
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	4e-17
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	5e-17
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	5e-17
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	6e-17
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	6e-17
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	7e-17
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	1e-16
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	2e-16
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	5e-16
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	8e-16
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	5e-15
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	5e-15
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	3e-14
4e4y_A	244	Short chain dehydrogenase family protein; structur	4e-14
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	5e-14
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	1e-13
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	2e-13
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	2e-13
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	7e-13
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	3e-12
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	4e-12
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	6e-12
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	9e-12
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	9e-12
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	8e-11
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	1e-10
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	5e-05

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  105 bits (263), Expect = 4e-29
 Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 7/99 (7%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+ +     + G      + 
Sbjct: 25  MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG------AA 78

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            A  +   +  D    E  V +A +  G +D L+ N   
Sbjct: 79  SAHYIAGTM-EDMTFAEQFVAQAGKLMGGLDMLILNHIT 116

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  103 bits (258), Expect = 1e-28
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 5/99 (5%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           +  + + ++TGAS G+G      LA  G R+V  AR    L+ + DEI +          
Sbjct: 4   EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHV----Q 59

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             + + LD+  D    +  ++   + +G VD LVN A +
Sbjct: 60  EPIVLPLDI-TDCTKADTEIKDIHQKYGAVDILVNAAAM 97

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  102 bits (257), Expect = 3e-28
 Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 8/100 (8%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           + +KV+++TGAS G+G     +L  AG +I+  ARR  R++++  EI   G         
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG-------GT 54

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
           A+A  LDV  D  ++    Q A + +GR+D LVNNAG+  
Sbjct: 55  ALAQVLDVT-DRHSVAAFAQAAVDTWGRIDVLVNNAGVMP 93

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  101 bits (255), Expect = 6e-28
 Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 6/98 (6%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
             +++ +VTGAS G+G      L + G ++V  AR V  ++ L  E    G  G      
Sbjct: 30  WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPG-----T 84

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            +    D+  +   I             VD  +NNAG+
Sbjct: 85  LIPYRCDLS-NEEDILSMFSAIRSQHSGVDICINNAGL 121

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  101 bits (253), Expect = 7e-28
 Identities = 40/99 (40%), Positives = 55/99 (55%), Gaps = 8/99 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  KV ++TGASSG+G      LA  G  +  AARRV++L++L DE+   G        
Sbjct: 4   ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG-------A 56

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +   +ELDV  D   ++ +V    EA G +D LVNNAGI
Sbjct: 57  KVHVLELDVA-DRQGVDAAVASTVEALGGLDILVNNAGI 94

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  101 bits (254), Expect = 9e-28
 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 8/99 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           DL+ K  ++TGAS+G+G++  L  A+AG ++  AAR  D L+ + DEI   G        
Sbjct: 29  DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG-------G 81

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +A+ +  DV      +   + +     G +D  V NAGI
Sbjct: 82  KALPIRCDV-TQPDQVRGMLDQMTGELGGIDIAVCNAGI 119

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 99.6 bits (249), Expect = 4e-27
 Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 9/107 (8%)

Query: 6   SDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPG 65
           S  L P        + +TGA+SG G       A+AG  +V   RR +RL++L  E++   
Sbjct: 10  SSGLVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKT 69

Query: 66  MVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                   R + + LDV  D A +  +V    E F  +  L+NNAG+
Sbjct: 70  --------RVLPLTLDVR-DRAAMSAAVDNLPEEFATLRGLINNAGL 107

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 99.2 bits (248), Expect = 5e-27
 Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 8/112 (7%)

Query: 1   MASQVSDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE 60
            +  + D  +    L+ +V +VTGAS G+G      L   G R+V  AR V++L+++  E
Sbjct: 13  SSGHIDDDDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVERE 72

Query: 61  INKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           I   G         A +   D+ +    I         A GR D LVNNAG+
Sbjct: 73  IVAAG-------GEAESHACDL-SHSDAIAAFATGVLAAHGRCDVLVNNAGV 116

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 97.6 bits (244), Expect = 1e-26
 Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 7/95 (7%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           KV ++TGAS G+G      LA+ G  +   AR VDRL+ +  E+ +         V    
Sbjct: 3   KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ------GVEVFY 56

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             LDV +   ++E   +K  E FG VD +V NAG+
Sbjct: 57  HHLDV-SKAESVEEFSKKVLERFGDVDVVVANAGL 90

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 97.2 bits (243), Expect = 2e-26
 Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 8/98 (8%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           + EKVV++TG SSG+G+      AK G R+V   R  ++L+    EI +          +
Sbjct: 4   MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFP-------GQ 56

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            + V++DV  +   I+  +++  E FGR+D L+NNA  
Sbjct: 57  ILTVQMDV-RNTDDIQKMIEQIDEKFGRIDILINNAAG 93

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 96.1 bits (240), Expect = 4e-26
 Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 11/98 (11%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           ++   ++VTGA SGLGR   + L + G ++    RR  RL+     +             
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN----------A 50

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            + +  D+ A    ++++   A E  G  + +++ AG 
Sbjct: 51  VIGIVADL-AHHEDVDVAFAAAVEWGGLPELVLHCAGT 87

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 96.1 bits (240), Expect = 5e-26
 Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 12/96 (12%)

Query: 17  EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
           +  V++TGAS G+G      L   G R+   AR   RL++L  E+             A+
Sbjct: 5   KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEG-----------AL 53

Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            +  DV  +      +V    EAFG + ALVNNAG+
Sbjct: 54  PLPGDV-REEGDWARAVAAMEEAFGELSALVNNAGV 88

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 95.4 bits (238), Expect = 3e-25
 Identities = 27/98 (27%), Positives = 53/98 (54%), Gaps = 3/98 (3%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  +V +VTG ++G+G+    +L + G  +V A+R+++RLKS  DE+            R
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQ--AR 73

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            + ++ ++  +   +   V+   + FG+++ LVNN G 
Sbjct: 74  VIPIQCNI-RNEEEVNNLVKSTLDTFGKINFLVNNGGG 110

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 94.1 bits (235), Expect = 4e-25
 Identities = 34/99 (34%), Positives = 44/99 (44%), Gaps = 8/99 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           DL  K  +VTG++ GLG  +   LA AG R++    R   L    D + + G        
Sbjct: 6   DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG-------Y 58

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            A  V  DV  D   IE +  K       VD L+NNAGI
Sbjct: 59  DAHGVAFDV-TDELAIEAAFSKLDAEGIHVDILINNAGI 96

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 93.5 bits (233), Expect = 7e-25
 Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 6/99 (6%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           DL  K V+   A  G+G +   +L K   +      RV+   +L +             V
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINP------KV 55

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                  DV    A  +  ++K ++    VD L+N AGI
Sbjct: 56  NITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGI 94

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 93.3 bits (233), Expect = 7e-25
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 8/99 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L+ +V +VTG +  +G      LA+AG R++ A           +++   G        
Sbjct: 10  RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG-------H 62

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
              +V +DV  +  +++ +V+   E  GRVD LV  AGI
Sbjct: 63  DVSSVVMDV-TNTESVQNAVRSVHEQEGRVDILVACAGI 100

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 94.2 bits (235), Expect = 8e-25
 Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 7/99 (7%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
               KV  +TG  +GLG+     L+  G + V A+R++D LK+  ++I+      S    
Sbjct: 23  SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQIS------SQTGN 76

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +  A++ DV  D   ++ +V +  +  G  + ++NNA  
Sbjct: 77  KVHAIQCDV-RDPDMVQNTVSELIKVAGHPNIVINNAAG 114

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 93.0 bits (232), Expect = 8e-25
 Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 15/103 (14%)

Query: 17  EKVVMVTGASSGLGREFCLDLAKAGCR-------IVAAARRVDRLKSLCDEINKPGMVGS 69
           + ++++TGA  G+GR   L+ A+A          +V ++R    L+ +  E    G    
Sbjct: 2   KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG---- 57

Query: 70  PDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                   +  D+ +D A +        E +G +D LVNNAG+
Sbjct: 58  ---ALTDTITADI-SDMADVRRLTTHIVERYGHIDCLVNNAGV 96

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 93.0 bits (232), Expect = 1e-24
 Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 11/94 (11%)

Query: 19  VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAV 78
           +V+VTGA++G G        + G +++A  RR +RL+ L DE+                 
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG----------DNLYIA 51

Query: 79  ELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +LDV  + A IE  +      +  +D LVNNAG+
Sbjct: 52  QLDVR-NRAAIEEMLASLPAEWCNIDILVNNAGL 84

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 93.0 bits (232), Expect = 1e-24
 Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 8/98 (8%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L +KVV+++G    LG       A+ G  +V AAR V+RL+ +  ++   G        R
Sbjct: 9   LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG-------RR 61

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           A++V  D+  D A +   V +  +A+GRVD ++NNA  
Sbjct: 62  ALSVGTDI-TDDAQVAHLVDETMKAYGRVDVVINNAFR 98

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 92.7 bits (231), Expect = 2e-24
 Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 9/102 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAG---CRIVAAARRVDRLKSLCDEINKPGMVGSP 70
            L +K V++TGAS+G+G+   L+  +A     +++ AARR+++L+ L   I++       
Sbjct: 30  RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEF----- 84

Query: 71  DSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            + +    +LD+      I+  ++   + F  +D LVNNAG 
Sbjct: 85  PNAKVHVAQLDIT-QAEKIKPFIENLPQEFKDIDILVNNAGK 125

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 92.6 bits (231), Expect = 2e-24
 Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 7/99 (7%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L+ K  ++TGA+ G+G +     A AG R+V + R V  L +    +      G     
Sbjct: 17  RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRAL------GEQFGT 70

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               V +D+ A+        ++A EAFG +D LVNNAGI
Sbjct: 71  DVHTVAIDL-AEPDAPAELARRAAEAFGGLDVLVNNAGI 108

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 92.3 bits (230), Expect = 2e-24
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 14/98 (14%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
             +K+V++TGASSG+G       ++ G  ++  ARRV+RLK+L                 
Sbjct: 14  SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLP-------------N 60

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            +  ++DV  D  T + ++ +A + +G  DA+VNNAG+
Sbjct: 61  TLCAQVDVT-DKYTFDTAITRAEKIYGPADAIVNNAGM 97

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 91.8 bits (229), Expect = 3e-24
 Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 8/103 (7%)

Query: 13  HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDS 72
             L  KVV+VTGA SG+GR      A     +VA     DRL  +  E+   G       
Sbjct: 3   QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG------- 55

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
              + V+ DV +    +E  V++ +E + R+D L NNAGI   
Sbjct: 56  KEVLGVKADV-SKKKDVEEFVRRTFETYSRIDVLCNNAGIMDG 97

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 92.3 bits (230), Expect = 4e-24
 Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 8/101 (7%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           +    V ++TGA SG+GR   L LA  G  + A  R    ++ + DEI   G        
Sbjct: 25  NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG-------G 77

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
           +A+A+E DV +D   +  +V+     FG +D +V NAGI G
Sbjct: 78  QAIALEADV-SDELQMRNAVRDLVLKFGHLDIVVANAGING 117

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 91.9 bits (229), Expect = 4e-24
 Identities = 37/96 (38%), Positives = 46/96 (47%), Gaps = 11/96 (11%)

Query: 16  NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRA 75
           + KV +VTGASSG GR        AG  ++  ARR + L  L                RA
Sbjct: 4   SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAA----------YPDRA 53

Query: 76  VAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
            A+ LDV  DG  I++        +GRVD LVNNAG
Sbjct: 54  EAISLDV-TDGERIDVVAADVLARYGRVDVLVNNAG 88

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 91.9 bits (229), Expect = 5e-24
 Identities = 32/99 (32%), Positives = 42/99 (42%), Gaps = 8/99 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
               KV +VTGA  G+GRE    LAK+   ++  +R      S+ DEI   G        
Sbjct: 41  CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG-------Y 93

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            +     DV +    I   + K       VD LVNNAGI
Sbjct: 94  ESSGYAGDV-SKKEEISEVINKILTEHKNVDILVNNAGI 131

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 91.5 bits (228), Expect = 5e-24
 Identities = 36/99 (36%), Positives = 47/99 (47%), Gaps = 11/99 (11%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
              +K+ +VTGA SG+GR   + LA AG  +  A RR+D L+    EI            
Sbjct: 25  KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG----------D 74

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            A+ V  DV  D  ++        E FGRVD L NNAG 
Sbjct: 75  DALCVPTDV-TDPDSVRALFTATVEKFGRVDVLFNNAGT 112

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 91.5 bits (228), Expect = 7e-24
 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 8/99 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  KV  VTG+S G+G       A+AG  +          +         G       V
Sbjct: 31  SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYG-------V 83

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            + A + ++ +D  ++E ++ +  + FG +D  V NAG+
Sbjct: 84  HSKAYKCNI-SDPKSVEETISQQEKDFGTIDVFVANAGV 121

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 91.2 bits (227), Expect = 7e-24
 Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 8/99 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            +  ++V++TGA  G+GR    + AK   ++V        L+    +    G        
Sbjct: 28  SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG-------A 80

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +     +D  ++   I  S +K     G V  LVNNAG+
Sbjct: 81  KVHTFVVDC-SNREDIYSSAKKVKAEIGDVSILVNNAGV 118

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 90.3 bits (225), Expect = 1e-23
 Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 5/100 (5%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           LN+++++VTGAS G+GRE  +  A+ G  ++   R  ++L+ +   IN+          +
Sbjct: 10  LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET----GRQPQ 65

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
              ++L         +   Q+    + R+D +++NAG+ G
Sbjct: 66  WFILDLLT-CTSENCQQLAQRIAVNYPRLDGVLHNAGLLG 104

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 90.3 bits (225), Expect = 1e-23
 Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 2/99 (2%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L   + +VTGA SG+GR   + LA  G  + A        +     +  PG    P    
Sbjct: 5   LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGN 64

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGR-VDALVNNAGI 112
             A + DV ++       +++    F R    +V+ AGI
Sbjct: 65  HAAFQADV-SEARAARCLLEQVQACFSRPPSVVVSCAGI 102

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 90.3 bits (225), Expect = 1e-23
 Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 8/99 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            LN+ V +VTGA++G+GR      AKAG  +V    + +  +++   I + G        
Sbjct: 9   HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG-------G 61

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +A+ +E +V  D    E  ++ A + FG++  LVNNAG 
Sbjct: 62  KAIGLECNV-TDEQHREAVIKAALDQFGKITVLVNNAGG 99

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score = 89.9 bits (224), Expect = 1e-23
 Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 5/100 (5%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  +V++VTGA+ G+G       A  G  +V   R    L  + D+I   G       + 
Sbjct: 12  LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG--QPQPLI- 68

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
            +A+ L+  A          +    FGR+D L++NA I G
Sbjct: 69  -IALNLEN-ATAQQYRELAARVEHEFGRLDGLLHNASIIG 106

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 90.9 bits (226), Expect = 2e-23
 Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 6/99 (6%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           D   +   VTG ++G+G      L   GC++  A  R D +      +   G        
Sbjct: 5   DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGS-----GP 59

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             + V+LDV A     +++  +    FG V  L NNAG+
Sbjct: 60  EVMGVQLDV-ASREGFKMAADEVEARFGPVSILCNNAGV 97

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 89.5 bits (223), Expect = 3e-23
 Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 8/99 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L+++V +VTGAS G+GR   L+LA+ G  ++  A      + +     + G       +
Sbjct: 25  TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAG-------L 77

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                 L+V  D   ++  V+   + FG ++ LVNNAGI
Sbjct: 78  EGRGAVLNV-NDATAVDALVESTLKEFGALNVLVNNAGI 115

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 89.1 bits (222), Expect = 3e-23
 Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 8/99 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L+ K  ++TGA +G+G+E  +  A AG  +V +    D    + DEI + G        
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG-------G 60

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +A A   D+      +      A    G+VD LVNNAG 
Sbjct: 61  QAFACRCDI-TSEQELSALADFAISKLGKVDILVNNAGG 98

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 89.9 bits (224), Expect = 3e-23
 Identities = 40/101 (39%), Positives = 50/101 (49%), Gaps = 8/101 (7%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  K+ +VTGASSG+GR   L  A+ G ++V  AR  + L  L DEI   G        
Sbjct: 5   RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGG-------G 57

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
            A A+  DV  D A  E  V+ A   FG +D   NNAG  G
Sbjct: 58  EAAALAGDV-GDEALHEALVELAVRRFGGLDTAFNNAGALG 97

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 89.6 bits (223), Expect = 3e-23
 Identities = 36/103 (34%), Positives = 48/103 (46%), Gaps = 9/103 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
             + +V +VTGA+SG+G E    L K G R+   AR  + L++   E+ + G       V
Sbjct: 19  TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG-------V 71

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI-RGN 115
            A     DV      IE  V    E +G VD LVNNAG   G 
Sbjct: 72  EADGRTCDV-RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGG 113

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score = 89.2 bits (222), Expect = 3e-23
 Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 6/99 (6%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           DL+E V +VTG SSG+G      L +AG  +   AR  +RL++    + +          
Sbjct: 5   DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGA----- 59

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           R  A   DV  D   +    +      G    LVNNAG 
Sbjct: 60  RLFASVCDV-LDALQVRAFAEACERTLGCASILVNNAGQ 97

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 90.2 bits (224), Expect = 4e-23
 Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 3/97 (3%)

Query: 16  NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRA 75
           ++K++++TGASSG GR     LA AG R+ A+ R +    +   E        +   +R 
Sbjct: 4   SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLR- 62

Query: 76  VAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             +ELDV     +++ ++ +     GR+D L++NAG 
Sbjct: 63  -TLELDVQ-SQVSVDRAIDQIIGEDGRIDVLIHNAGH 97

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 88.7 bits (221), Expect = 4e-23
 Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 8/99 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            LNEKV +VTGAS G+G E    LA  G  +V  A      +   + + + G        
Sbjct: 2   SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG-------F 54

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +A  + L++ +D  +I+    +       +D LVNNAGI
Sbjct: 55  KARGLVLNI-SDIESIQNFFAEIKAENLAIDILVNNAGI 92

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 88.3 bits (220), Expect = 5e-23
 Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 8/100 (8%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
              KV +VTG+  G+G+ +   LA+ G  +V A    +  +++  +I   G         
Sbjct: 7   FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG-------GT 59

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
           A++V +DV +D  + +    +    FG +D LVNNA I G
Sbjct: 60  AISVAVDV-SDPESAKAMADRTLAEFGGIDYLVNNAAIFG 98

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 88.3 bits (220), Expect = 7e-23
 Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 9/100 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI-NKPGMVGSPDS 72
           DL  +V +VTG S GLG      LA+AGC +V A+R ++       ++  K G       
Sbjct: 18  DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG------- 70

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           V  +A   DV ++   ++  ++   E FG++D +VN AGI
Sbjct: 71  VETMAFRCDV-SNYEEVKKLLEAVKEKFGKLDTVVNAAGI 109

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 88.8 bits (221), Expect = 7e-23
 Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 8/100 (8%)

Query: 13  HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDS 72
           H    +   VTG SSG+G      LA  G  +   AR    + +  D +   G       
Sbjct: 20  HMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG------- 72

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                   DV      +  +V  A E FG +  LVN+AG 
Sbjct: 73  HDVDGSSCDV-TSTDEVHAAVAAAVERFGPIGILVNSAGR 111

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 88.4 bits (220), Expect = 7e-23
 Identities = 29/99 (29%), Positives = 39/99 (39%), Gaps = 7/99 (7%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
               ++ +VTG  +G+GR     L+  G  +V   RR D L +   EI            
Sbjct: 30  SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT------GN 83

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
              AV  DV  D   +          F R+D LVNNAG 
Sbjct: 84  IVRAVVCDV-GDPDQVAALFAAVRAEFARLDLLVNNAGS 121

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 87.9 bits (219), Expect = 1e-22
 Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 9/100 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIV-AAARRVDRLKSLCDEINKPGMVGSPDS 72
           DL  KVV++TG+S+GLG+   +  A    ++V     + D   S+ +EI K G       
Sbjct: 4   DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG------- 56

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             A+AV+ DV    + +   VQ A + FG++D ++NNAG+
Sbjct: 57  GEAIAVKGDV-TVESDVINLVQSAIKEFGKLDVMINNAGL 95

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 88.0 bits (219), Expect = 1e-22
 Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 5/99 (5%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
             + K V++TG+S+G+GR   +  A+ G  +    R  +RL+     I K G+       
Sbjct: 3   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEK---- 58

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +  +V  DV       +  +    + FG++D LVNNAG 
Sbjct: 59  QVNSVVADV-TTEDGQDQIINSTLKQFGKIDVLVNNAGA 96

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 87.2 bits (217), Expect = 1e-22
 Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 16/99 (16%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           + +    +VTGA  G+GR+    L  +G ++VA  R    L SL  E             
Sbjct: 4   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG---------- 53

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               V +D+  D      + +KA    G VD LVNNA +
Sbjct: 54  -IEPVCVDL-GDWD----ATEKALGGIGPVDLLVNNAAL 86

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 87.6 bits (218), Expect = 1e-22
 Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 9/99 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  ++ +VTG S G+G+     L +AG R+   AR  +        ++  G        
Sbjct: 26  SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-------- 77

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
              A+  D+ +  A      Q   E   R+D LVNNAG 
Sbjct: 78  DCQAIPADL-SSEAGARRLAQALGELSARLDILVNNAGT 115

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 87.2 bits (217), Expect = 2e-22
 Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 8/96 (8%)

Query: 17  EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
           +KV +VTGA  G+G+   L L K G  +  A       K++  EIN+ G         AV
Sbjct: 2   KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG-------GHAV 54

Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           AV++DV +D   +  +V++A +  G  D +VNNAG+
Sbjct: 55  AVKVDV-SDRDQVFAAVEQARKTLGGFDVIVNNAGV 89

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 87.6 bits (218), Expect = 2e-22
 Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 6/101 (5%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
              ++VV++TG  SGLGR   + LA  G ++       + L++    + +          
Sbjct: 10  RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDA----- 64

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
             +    DV +D A +E  V    E FGR+D   NNAGI G
Sbjct: 65  EVLTTVADV-SDEAQVEAYVTATTERFGRIDGFFNNAGIEG 104

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 87.6 bits (218), Expect = 2e-22
 Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 5/99 (5%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
              ++  +VTG  SG+G+     L  AG  ++   R  D+L     E+   G     +  
Sbjct: 8   SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALG----ANGG 63

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                  D+  +      +V       GR+  +V+ AG 
Sbjct: 64  AIRYEPTDI-TNEDETARAVDAVTAWHGRLHGVVHCAGG 101

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 87.2 bits (217), Expect = 2e-22
 Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 8/101 (7%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
             N KV +VTGA   +G    L LA+ G  I       + L+     + + G       V
Sbjct: 4   KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG-------V 56

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
            A +   DV      +  +V      FG++D L NNAG +G
Sbjct: 57  EARSYVCDV-TSEEAVIGTVDSVVRDFGKIDFLFNNAGYQG 96

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 87.0 bits (216), Expect = 2e-22
 Identities = 24/99 (24%), Positives = 35/99 (35%), Gaps = 9/99 (9%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
                V V GA   +G E     A  G  + A  R  ++L  L  EI   G        R
Sbjct: 5   PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG-------GR 57

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIR 113
            VA  LD   +   +   +  A +A   ++  + N G  
Sbjct: 58  IVARSLDA-RNEDEVTAFLNAA-DAHAPLEVTIFNVGAN 94

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 87.3 bits (217), Expect = 2e-22
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 6/99 (6%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            +N KV +VTGA+ G+GR F   L   G ++      ++        +++       +  
Sbjct: 4   MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHE-----QFEPQ 58

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           + + ++ DV AD   +  + +K  + FGR+D LVNNAG+
Sbjct: 59  KTLFIQCDV-ADQQQLRDTFRKVVDHFGRLDILVNNAGV 96

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 87.3 bits (217), Expect = 2e-22
 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 7/98 (7%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L +KV  +TG  SG+G        + GC  V A+R + R+ +   ++            R
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT------GRR 78

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            + + +DV      +  +V +A + FGR+D L+N A  
Sbjct: 79  CLPLSMDV-RAPPAVMAAVDQALKEFGRIDILINCAAG 115

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 86.8 bits (216), Expect = 3e-22
 Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 11/99 (11%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L+     VTGA SG+G E C   A +G R++   R    L     E+          + 
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG---------AA 58

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            A  +  DV  D   +  +  +A EA   V  LVN+AGI
Sbjct: 59  VAARIVADV-TDAEAMTAAAAEA-EAVAPVSILVNSAGI 95

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 86.5 bits (215), Expect = 3e-22
 Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 15/99 (15%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L +K+ +VTGA+ G+G E   DL++    + A  R  + L +L +              
Sbjct: 2   SLKKKIAVVTGATGGMGIEIVKDLSRDH-IVYALGRNPEHLAALAEIEG----------- 49

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               +E D+       E  V K  +    VD LV+ A +
Sbjct: 50  -VEPIESDI-VKEVLEEGGVDKL-KNLDHVDTLVHAAAV 85

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 86.4 bits (215), Expect = 3e-22
 Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 9/100 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIV-AAARRVDRLKSLCDEINKPGMVGSPDS 72
            L  K  +VTG+S GLG+     L   G  IV   +     L +  +E    G       
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAG------- 54

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +  V  + DV  +   +E  V+ A +AFGR+D LVNNAGI
Sbjct: 55  INVVVAKGDV-KNPEDVENMVKTAMDAFGRIDILVNNAGI 93

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 86.1 bits (214), Expect = 5e-22
 Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 11/99 (11%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           DL+ +  +VTG S G+G      L KAG  +  A   V   +++   +            
Sbjct: 9   DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN---------- 58

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
              AVE+DV    A+++ ++QKA +A G  D L  NAG+
Sbjct: 59  GGFAVEVDV-TKRASVDAAMQKAIDALGGFDLLCANAGV 96

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score = 86.1 bits (214), Expect = 7e-22
 Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 5/98 (5%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
             EKV ++TG+S+G+GR   +  A+ G ++    R  +RL+    +I   G+        
Sbjct: 4   FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQ----N 59

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             +V  DV    A  +  +      FG++D LVNNAG 
Sbjct: 60  VNSVVADV-TTDAGQDEILSTTLGKFGKLDILVNNAGA 96

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 85.2 bits (212), Expect = 7e-22
 Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 16/99 (16%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  + V+VTGA  G+GR     L   G R+VA +R    L SL  E             
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG---------- 53

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               V +D+  D      + ++A  + G VD LVNNA +
Sbjct: 54  -IEPVCVDL-GDWE----ATERALGSVGPVDLLVNNAAV 86

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 85.8 bits (213), Expect = 7e-22
 Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 13/97 (13%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIV--AAARRVDRLKSLCDEINKPGMVGSPDSVRA 75
           KV++VTG S G+G+     L       V    AR    LK L ++             R 
Sbjct: 3   KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGD----------RF 52

Query: 76  VAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             V  D+  + + ++  V  A +  G++D+LV NAG+
Sbjct: 53  FYVVGDI-TEDSVLKQLVNAAVKGHGKIDSLVANAGV 88

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 85.2 bits (212), Expect = 8e-22
 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 11/99 (11%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           +L  KV +VTGAS G+G+     LA+ G +++  A      +++ D +            
Sbjct: 6   NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG----------D 55

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               + L+V  +  +IE  ++   + FG VD LVNNAGI
Sbjct: 56  NGKGMALNV-TNPESIEAVLKAITDEFGGVDILVNNAGI 93

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 85.3 bits (212), Expect = 9e-22
 Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 9/99 (9%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDSV 73
              K  +VTG+S G+G+   + LA+ G  IV   AR         +EI K G       V
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLG-------V 54

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           + + V+ +V    A I+   Q+  E FGR+D  VNNA  
Sbjct: 55  KVLVVKANV-GQPAKIKEMFQQIDETFGRLDVFVNNAAS 92

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 85.7 bits (213), Expect = 1e-21
 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 7/99 (7%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           DL+ + V+VTG + G+GR      A+AG  +  AAR    L S+  E+ + G      + 
Sbjct: 38  DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG------AG 91

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             + V LDV +D  +   + +   +AFG +D +  NAGI
Sbjct: 92  NVIGVRLDV-SDPGSCADAARTVVDAFGALDVVCANAGI 129

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 85.3 bits (212), Expect = 1e-21
 Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 9/100 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKPGMVGSPDS 72
            L +++ +VTGAS G+GR   L+LA AG ++ V  A        +   I   G       
Sbjct: 25  PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAG------- 77

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             A AV+ DV +  + +E       E +GR+D LVNNAGI
Sbjct: 78  GEAFAVKADV-SQESEVEALFAAVIERWGRLDVLVNNAGI 116

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score = 84.9 bits (211), Expect = 1e-21
 Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 7/99 (7%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            ++ KV ++TG+SSG+G       AK G  IV  AR+VDRL      + +         V
Sbjct: 4   GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF------GV 57

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           R + V +DV A    ++  V+    +FG  D LVNNAG 
Sbjct: 58  RVLEVAVDV-ATPEGVDAVVESVRSSFGGADILVNNAGT 95

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 84.9 bits (211), Expect = 1e-21
 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 7/99 (7%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           DL  + V+VTG + G+GR      A+AG  +  A R    + +   ++++ G      S 
Sbjct: 7   DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG------SG 60

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           + + V+ DV +D A  +    +A E FG +D +  NAG+
Sbjct: 61  KVIGVQTDV-SDRAQCDALAGRAVEEFGGIDVVCANAGV 98

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 85.3 bits (212), Expect = 1e-21
 Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 9/100 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKPGMVGSPDS 72
                V +VTG   G+G      LA +G  I +      + +  +  E++  G       
Sbjct: 26  QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLG------- 78

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            R + +  D+ AD ++ + +V      FGR+D LVNNAGI
Sbjct: 79  ARVIFLRADL-ADLSSHQATVDAVVAEFGRIDCLVNNAGI 117

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 84.9 bits (211), Expect = 1e-21
 Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 11/99 (11%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L+ K ++VTGA+SG+GR      A+ G  +VA  R    L      +            
Sbjct: 3   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE----------A 52

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            A+AV  DV +D   +E    +A E FGR+  + + AG+
Sbjct: 53  EAIAVVADV-SDPKAVEAVFAEALEEFGRLHGVAHFAGV 90

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score = 85.4 bits (212), Expect = 1e-21
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 5/99 (5%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
             + K V++TG+S+G+GR   +  AK G ++    R  DRL+    +I K G+       
Sbjct: 23  RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAE---- 78

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +  AV  DV  + +  +  +      FG++D LVNNAG 
Sbjct: 79  KINAVVADV-TEASGQDDIINTTLAKFGKIDILVNNAGA 116

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 84.9 bits (211), Expect = 2e-21
 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 11/99 (11%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  K  ++TG++ G+GR F     + G  +  A   ++R +    EI            
Sbjct: 5   RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG----------P 54

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            A AV++DV     +I+ ++    E  G +D LVNNA +
Sbjct: 55  AAYAVQMDV-TRQDSIDAAIAATVEHAGGLDILVNNAAL 92

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 84.1 bits (209), Expect = 2e-21
 Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 9/99 (9%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKPGMVGSPDSV 73
              K  +VTGAS G+GR   L LA+ G  + V  A   ++ +++ +EI   G       V
Sbjct: 2   KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKG-------V 54

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            + A++ +V AD   ++  +++    FG +D LVNNAGI
Sbjct: 55  DSFAIQANV-ADADEVKAMIKEVVSQFGSLDVLVNNAGI 92

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 84.1 bits (209), Expect = 2e-21
 Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 9/99 (9%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIV-AAARRVDRLKSLCDEINKPGMVGSPDSV 73
           L  KV +VTGAS G+GR   +DLAK G  +V   A    +   + DEI K G        
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLG-------S 54

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            A+AV  DV A+   +   V++  + FG+VD LVNNAG+
Sbjct: 55  DAIAVRADV-ANAEDVTNMVKQTVDVFGQVDILVNNAGV 92

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 84.1 bits (209), Expect = 3e-21
 Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 11/99 (11%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  +  +VTGA+ G+G          G  +     R D+LK +  ++            
Sbjct: 24  KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLG----------K 73

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                  ++ +D  +I+   + A      +D LVNNAGI
Sbjct: 74  DVFVFSANL-SDRKSIKQLAEVAEREMEGIDILVNNAGI 111

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 84.2 bits (209), Expect = 3e-21
 Identities = 32/113 (28%), Positives = 45/113 (39%), Gaps = 9/113 (7%)

Query: 1   MASQVSDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVA-AARRVDRLKSLCD 59
           M +  +    P     ++V  VTG   GLG      L  AG  +    + R D + +   
Sbjct: 9   MGTLEAQTQGPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLM 68

Query: 60  EINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                G           A  +DV AD  + E   +K    FG+VD L+NNAGI
Sbjct: 69  HERDAG-------RDFKAYAVDV-ADFESCERCAEKVLADFGKVDVLINNAGI 113

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 83.7 bits (208), Expect = 4e-21
 Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 11/112 (9%)

Query: 1   MASQVSDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE 60
           MAS   +  +    L  KV +VT ++ G+G      LA+ G  +V ++R+ + +      
Sbjct: 1   MASTGVERRK---PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVAT 57

Query: 61  INKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +   G       +        V       E  V  A    G VD LV+NA +
Sbjct: 58  LQGEG-------LSVTGTVCHV-GKAEDRERLVAMAVNLHGGVDILVSNAAV 101

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 84.3 bits (209), Expect = 4e-21
 Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 8/99 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
             + +  +VTG +SG+G     + A+ G R+V +      L+   + +   G        
Sbjct: 28  GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG-------F 80

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            A  V  DV      +     +A+   G VD + +NAGI
Sbjct: 81  DAHGVVCDV-RHLDEMVRLADEAFRLLGGVDVVFSNAGI 118

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 83.3 bits (207), Expect = 4e-21
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 7/99 (7%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  KV +VTG++ G+GR     LA AG  ++      +R K++ +EI           V
Sbjct: 4   KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY------GV 57

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +A  VE+++     +I  + ++ +     +D LVNNAGI
Sbjct: 58  KAHGVEMNL-LSEESINKAFEEIYNLVDGIDILVNNAGI 95

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 83.3 bits (207), Expect = 5e-21
 Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 11/103 (10%)

Query: 13  HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIV---AAARRVDRLKSLCDEINKPGMVGS 69
           HDL  KV+++ G    LG       A     +V     A+  D    L DE+   G    
Sbjct: 7   HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQG---- 62

Query: 70  PDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               +    + D+ ++   +      A + FG+VD  +N  G 
Sbjct: 63  ---AKVALYQSDL-SNEEEVAKLFDFAEKEFGKVDIAINTVGK 101

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 83.4 bits (207), Expect = 6e-21
 Identities = 34/97 (35%), Positives = 45/97 (46%), Gaps = 10/97 (10%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAA--ARRVDRLKSLCDEINKPGMVGSPDSVRA 75
           KV MVTG + G+GR     LA  G  I  A   ++ ++       I            +A
Sbjct: 3   KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAAD-------QKA 55

Query: 76  VAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           V V LDV  D A  + ++ +A E  G  D LVNNAGI
Sbjct: 56  VFVGLDV-TDKANFDSAIDEAAEKLGGFDVLVNNAGI 91

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 83.0 bits (206), Expect = 6e-21
 Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 9/100 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKPGMVGSPDS 72
           DL  K V++TG+S G+G       A+AG ++ +   +    +      +   G       
Sbjct: 4   DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADG------- 56

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             A     D+ A     +  V +    FG +D L+NNAG 
Sbjct: 57  GDAAFFAADL-ATSEACQQLVDEFVAKFGGIDVLINNAGG 95

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 84.1 bits (208), Expect = 7e-21
 Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 15/106 (14%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-------LKSLCDEINKPGM 66
            L    V +TGAS G+G+   L  AK G  IV AA+           + +  +EI   G 
Sbjct: 42  RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVG- 100

Query: 67  VGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                  +A+   +DV  D   I  +V+KA + FG +D LVNNA  
Sbjct: 101 ------GKALPCIVDV-RDEQQISAAVEKAIKKFGGIDILVNNASA 139

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 83.5 bits (207), Expect = 7e-21
 Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 10/116 (8%)

Query: 1   MASQVSDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCD 59
                S  +     +     +VTGA+  +GR   + L + G R+ +      +   SL D
Sbjct: 7   HHHHSSGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLAD 66

Query: 60  EINKPGMVGSPDSVRAVAVELDVC---ADGATIEISVQKAWEAFGRVDALVNNAGI 112
           E+NK        S  AV  + D+       A+ E  +   + AFGR D LVNNA  
Sbjct: 67  ELNKER------SNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASA 116

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 82.6 bits (205), Expect = 9e-21
 Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 9/100 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVA-AARRVDRLKSLCDEINKPGMVGSPDS 72
            +++++  VTG   G+G   C  L K G R+VA       R     ++    G       
Sbjct: 10  VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALG------- 62

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               A E +V  D  + + +  K     G +D LVNNAGI
Sbjct: 63  FDFYASEGNV-GDWDSTKQAFDKVKAEVGEIDVLVNNAGI 101

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 82.5 bits (205), Expect = 9e-21
 Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 11/98 (11%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  K  +VTGA+ G+G+     LA  G  ++ +    +  K+    I            +
Sbjct: 4   LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG----------KK 53

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           A A+  D+ +D  +++    +     G +D LVNNA I
Sbjct: 54  ARAIAADI-SDPGSVKALFAEIQALTGGIDILVNNASI 90

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 83.0 bits (206), Expect = 9e-21
 Identities = 37/99 (37%), Positives = 48/99 (48%), Gaps = 10/99 (10%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  +  +VTGA SG+GR      A+AG  ++A  R  D +K + DEI   G        
Sbjct: 28  SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGG-------G 79

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            A AV  D+ AD        ++   A  RVD LVNNAGI
Sbjct: 80  SAEAVVADL-ADLEGAANVAEEL-AATRRVDVLVNNAGI 116

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 81.8 bits (203), Expect = 1e-20
 Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 9/96 (9%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
            VV+VTGAS G+G+   L L KAGC++ V  AR     + +  +I   G        +A+
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYG-------GQAI 54

Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               DV +  A +E  ++ A +A+G +D +VNNAGI
Sbjct: 55  TFGGDV-SKEADVEAMMKTAIDAWGTIDVVVNNAGI 89

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 82.2 bits (204), Expect = 2e-20
 Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 9/98 (9%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L+ KV ++TG + G+G        + G +++   R  D  +     +  P         +
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD--------Q 55

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               + D  +D            +AFG V  LVNNAGI
Sbjct: 56  IQFFQHDS-SDEDGWTKLFDATEKAFGPVSTLVNNAGI 92

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 82.3 bits (204), Expect = 2e-20
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 15/106 (14%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-------RLKSLCDEINKPGM 66
            L+ K + +TGAS G+G    L  A+ G  +  AA+           + S    +N  G 
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAG- 61

Query: 67  VGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                  + +A++ D+  +   +  +V    + FG +D LVNNA  
Sbjct: 62  ------GQGLALKCDI-REEDQVRAAVAATVDTFGGIDILVNNASA 100

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 81.8 bits (203), Expect = 2e-20
 Identities = 34/100 (34%), Positives = 44/100 (44%), Gaps = 11/100 (11%)

Query: 13  HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDS 72
           +DL+ K V++TG + GLG E       AG R+V A    +   +   E+           
Sbjct: 1   NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG---------- 50

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             A    LDV       +  V  A E FG VD LVNNAGI
Sbjct: 51  DAARYQHLDV-TIEEDWQRVVAYAREEFGSVDGLVNNAGI 89

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 81.8 bits (203), Expect = 2e-20
 Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 9/100 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVGSPDS 72
               K ++VTG + G+G  F   +A AG  +    R   D ++       + G       
Sbjct: 11  SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG------- 63

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           V+  A + DV ++   +  ++Q+     G +  L+ NAG+
Sbjct: 64  VKTKAYQCDV-SNTDIVTKTIQQIDADLGPISGLIANAGV 102

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 81.1 bits (201), Expect = 2e-20
 Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 16/96 (16%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
            ++++TGASSGLG E        G       R   +L ++ + ++               
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSN----------NVGY 51

Query: 78  VELDVCADGATIEISVQKAWEA-FGRVDALVNNAGI 112
              D+ +        V++ +E        +V++AG 
Sbjct: 52  RARDLASHQE-----VEQLFEQLDSIPSTVVHSAGS 82

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 81.8 bits (203), Expect = 2e-20
 Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 9/100 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           +L     +VTG S G+G     +LA  G  +   +R    L     +    G        
Sbjct: 6   NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG-------F 58

Query: 74  RAVAVELDVCADGATIEISVQKAWEAF-GRVDALVNNAGI 112
           +  A   D+ +  +  +  +      F G+++ LVNNAGI
Sbjct: 59  KVEASVCDL-SSRSERQELMNTVANHFHGKLNILVNNAGI 97

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score = 81.4 bits (202), Expect = 3e-20
 Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 9/100 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L     +VTG S G+G     +LA  G R+   +R    L    +   + G       +
Sbjct: 18  SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG-------L 70

Query: 74  RAVAVELDVCADGATIEISVQKAWEAF-GRVDALVNNAGI 112
                  D+       +  +Q     F G+++ LVNNAG+
Sbjct: 71  NVEGSVCDL-LSRTERDKLMQTVAHVFDGKLNILVNNAGV 109

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 81.1 bits (201), Expect = 3e-20
 Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 7/98 (7%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           +N +V +VTGAS G+GR   L L KAG  +    R +D L+ +  E    G        +
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG-------GQ 55

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            V V  D   +     +  Q   E  GR+D LVNNA  
Sbjct: 56  CVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYA 93

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 81.4 bits (202), Expect = 3e-20
 Identities = 26/100 (26%), Positives = 37/100 (37%), Gaps = 9/100 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  K V+VTG + G+G     + A  G  I   AR    L     +  K G        
Sbjct: 11  SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG-------F 63

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFG-RVDALVNNAGI 112
           +      D  +     E  +Q     FG ++D L+NN G 
Sbjct: 64  QVTGSVCDA-SLRPEREKLMQTVSSMFGGKLDILINNLGA 102

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 81.0 bits (201), Expect = 3e-20
 Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 10/98 (10%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L +K+ ++TG ++G+GR      A  G  I  A             I   G        R
Sbjct: 5   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADL--VPAPEAEAAIRNLG-------RR 55

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            + V+ DV +    +E   ++    FGR D LVNNAGI
Sbjct: 56  VLTVKCDV-SQPGDVEAFGKQVISTFGRCDILVNNAGI 92

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 81.5 bits (202), Expect = 3e-20
 Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 8/100 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVGSPDS 72
            +  K  ++TG++SG+G      LAKAG  IV       D ++++ DE+          S
Sbjct: 22  SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS------S 75

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
              +    D+    + I   +    + FG  D LVNNAG+
Sbjct: 76  GTVLHHPADM-TKPSEIADMMAMVADRFGGADILVNNAGV 114

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 81.6 bits (202), Expect = 4e-20
 Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 15/106 (14%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-------RLKSLCDEINKPGM 66
            L  K + ++G S G+G      +A  G  +   A+  +        + +   EI + G 
Sbjct: 6   SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAG- 64

Query: 67  VGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                  +A+ +  D+  DG  +  +V K  E FG +D  VNNA  
Sbjct: 65  ------GQALPIVGDI-RDGDAVAAAVAKTVEQFGGIDICVNNASA 103

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 81.0 bits (201), Expect = 4e-20
 Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 8/99 (8%)

Query: 15  LNEKVVMVTGAS-SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           L  KVV+VT A+ +G+G          G  +V +     RL    D++   G        
Sbjct: 20  LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG------LG 73

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           R  AV  DV      ++  + +  E  GR+D LVNNAG+
Sbjct: 74  RVEAVVCDV-TSTEAVDALITQTVEKAGRLDVLVNNAGL 111

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 81.5 bits (201), Expect = 5e-20
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 6/102 (5%)

Query: 11  PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSP 70
           P      +  +VTG + G+G E C  L+  G  +V   R V +     +++         
Sbjct: 6   PNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN----- 60

Query: 71  DSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                V  +LDV    AT+          FG++D LVNNAG+
Sbjct: 61  -HENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGV 101

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 80.7 bits (200), Expect = 5e-20
 Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 10/102 (9%)

Query: 14  DLNEKVVMVTGAS--SGLGREFCLDLAKAGCRIV-AAARRVDRLKSLCDEINKPGMVGSP 70
            L  KVV+VTGAS   G+G E     A+ G  +    A R    +    E+ K       
Sbjct: 17  SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY----- 71

Query: 71  DSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             ++A A +  V     + E  V+     FG++DA + NAG 
Sbjct: 72  -GIKAKAYKCQV-DSYESCEKLVKDVVADFGQIDAFIANAGA 111

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 80.3 bits (199), Expect = 9e-20
 Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 9/99 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIV-AAARRVDRLKSLCDEINKPGMVGSPDS 72
               +  ++T  + GLG++    L   G  +          ++++ +             
Sbjct: 4   GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVE------- 56

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
            R   V+ DV      +   V++A   FG++D L+NNAG
Sbjct: 57  ERLQFVQADV-TKKEDLHKIVEEAMSHFGKIDFLINNAG 94

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 80.3 bits (199), Expect = 9e-20
 Identities = 34/99 (34%), Positives = 44/99 (44%), Gaps = 11/99 (11%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           DL  KV +VTGA +G+G      LA  GC ++ A    D   +   +I            
Sbjct: 26  DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIG----------C 75

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            A A  +DV +D   I   V     AFG VD LV NAG+
Sbjct: 76  GAAACRVDV-SDEQQIIAMVDACVAAFGGVDKLVANAGV 113

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 79.4 bits (197), Expect = 1e-19
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 17/96 (17%)

Query: 17  EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
           E+  +VTG S G+GR     L   G R+  A+R  +                   S+ AV
Sbjct: 2   ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAA---------------QSLGAV 46

Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            +  D+  +    +  V++A EA G +  LV+ A +
Sbjct: 47  PLPTDL--EKDDPKGLVKRALEALGGLHVLVHAAAV 80

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 79.5 bits (197), Expect = 2e-19
 Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 9/100 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDS 72
               + ++V GA   +GR   +  A+ G  +V       +   +   EI K G       
Sbjct: 5   RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG------- 57

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             A+A++ D+  + A +E ++  A + FG +  LV+ AG 
Sbjct: 58  RSALAIKADL-TNAAEVEAAISAAADKFGEIHGLVHVAGG 96

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 79.5 bits (197), Expect = 2e-19
 Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 11/101 (10%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           +L  KV ++TGA  G+G E    LA+AG R+V A      L      +            
Sbjct: 8   ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVG----------R 57

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
            AV   +D+  +  ++   +    + FGR+D + NNA    
Sbjct: 58  GAVHHVVDL-TNEVSVRALIDFTIDTFGRLDIVDNNAAHSD 97

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 80.1 bits (198), Expect = 2e-19
 Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 10/98 (10%)

Query: 18  KVVMVTGASSGLGREFCLDLAK---AGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
            VV++TG SSG+G    + LA       ++ A  R +     L +         +     
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEA----ARALACPPGS 58

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
              ++LDV  D  ++  + ++  E  GRVD LV NAG+
Sbjct: 59  LETLQLDVR-DSKSVAAARERVTE--GRVDVLVCNAGL 93

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 79.1 bits (196), Expect = 2e-19
 Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 13/99 (13%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L +K V++TGA+ G+GR      AK G R+VA       L+   + +            
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV------------ 49

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            A  V +DV AD A++E    +A    GR+D +V+ AGI
Sbjct: 50  GAHPVVMDV-ADPASVERGFAEALAHLGRLDGVVHYAGI 87

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 79.5 bits (197), Expect = 2e-19
 Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 11/99 (11%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           DLN++V +VTG  SG+GR      AK G  +V A    D    + +EI            
Sbjct: 24  DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGS---------- 73

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +A  V +DV +     E  V+K    +GRVD LVNNAG 
Sbjct: 74  KAFGVRVDV-SSAKDAESMVEKTTAKWGRVDVLVNNAGF 111

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 79.1 bits (196), Expect = 2e-19
 Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 17/99 (17%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
              +KVV++TGAS G+G            R+VA +R +                      
Sbjct: 25  RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA----------------DP 68

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               V  D+ +   T +  V++  E FGR+D+LVNNAG+
Sbjct: 69  DIHTVAGDI-SKPETADRIVREGIERFGRIDSLVNNAGV 106

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 79.1 bits (196), Expect = 2e-19
 Identities = 27/100 (27%), Positives = 41/100 (41%), Gaps = 12/100 (12%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
              KVV+VTG   G+G         +G R+V   +     ++L  E+             
Sbjct: 7   YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-----------G 55

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
           AV +  DV      ++  V +    FGR+D +VNNAG   
Sbjct: 56  AVFILCDV-TQEDDVKTLVSETIRRFGRLDCVVNNAGHHP 94

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 78.7 bits (195), Expect = 3e-19
 Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 11/99 (11%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  KV ++TGA SG G       AK G ++V   R     + +  EI            
Sbjct: 6   SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGD---------- 55

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            A+AV  D+ +  A ++ +V+ A   FG+VD LVNNAGI
Sbjct: 56  AALAVAADI-SKEADVDAAVEAALSKFGKVDILVNNAGI 93

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 78.7 bits (195), Expect = 3e-19
 Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 7/99 (7%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            +  K+ +VT  SSGLG    L+LA+ G R++  +R  ++L++    I            
Sbjct: 4   GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLV-----SGA 58

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +   V  D+  +   I+   +KA    G  D LV + G 
Sbjct: 59  QVDIVAGDI-REPGDIDRLFEKA-RDLGGADILVYSTGG 95

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 78.8 bits (195), Expect = 3e-19
 Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 11/98 (11%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  +V ++TG +SGLGR         G R+    +  +RL+ L                 
Sbjct: 3   LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHG----------GN 52

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           AV V  DV       + + ++   AFG++D L+ NAGI
Sbjct: 53  AVGVVGDV-RSLQDQKRAAERCLAAFGKIDTLIPNAGI 89

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 78.4 bits (194), Expect = 3e-19
 Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 8/99 (8%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDSV 73
           L  KV +VTG++SG+G      LA  G  IV         ++ +   +           V
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH------GV 55

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           + +    D+ + G  +   V  A    GR+D LVNNAGI
Sbjct: 56  KVLYDGADL-SKGEAVRGLVDNAVRQMGRIDILVNNAGI 93

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 78.3 bits (194), Expect = 4e-19
 Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 7/95 (7%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           +V +VTGASSG G          G R+ A     + L+                + + + 
Sbjct: 3   RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY------ADKVLR 56

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           V  DV AD   +  ++    E FG +D LVNNAGI
Sbjct: 57  VRADV-ADEGDVNAAIAATMEQFGAIDVLVNNAGI 90

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 79.5 bits (196), Expect = 7e-19
 Identities = 44/114 (38%), Positives = 56/114 (49%), Gaps = 32/114 (28%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIV---------------AAARRVDRLKSLC 58
             + +V +VTGA +GLGRE+ L  A+ G ++V                AA  V       
Sbjct: 16  RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIV------V 69

Query: 59  DEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           DEI K G  G      AVA    V  DGA +   ++ A +AFGRVD LVNNAGI
Sbjct: 70  DEIRKAG--G-----EAVADYNSV-IDGAKV---IETAIKAFGRVDILVNNAGI 112

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 78.0 bits (193), Expect = 7e-19
 Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 9/99 (9%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDSV 73
              KV +VTGAS G+G      LA  G  +V   A +    + +  +I   G        
Sbjct: 25  ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAG-------G 77

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +A+  + DV +D A +      A EAFG VD LVNNAGI
Sbjct: 78  KALTAQADV-SDPAAVRRLFATAEEAFGGVDVLVNNAGI 115

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 78.0 bits (193), Expect = 7e-19
 Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 11/98 (11%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           LN K+ ++TGA+SG+G          G R+    RR D L +   EI             
Sbjct: 27  LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGG----------G 76

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           AV ++ D  A+ A ++   +K     GR+D L  NAG 
Sbjct: 77  AVGIQADS-ANLAELDRLYEKVKAEAGRIDVLFVNAGG 113

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 77.5 bits (192), Expect = 7e-19
 Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 10/97 (10%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIV-AAARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
           +  ++TGAS G+GR   L LA+ G  +     +  ++ + + +E  + G          V
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRG-------SPLV 54

Query: 77  AV-ELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           AV   ++  +       V +A E  G +D LVNNAGI
Sbjct: 55  AVLGANL-LEAEAATALVHQAAEVLGGLDTLVNNAGI 90

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 77.6 bits (192), Expect = 9e-19
 Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 9/99 (9%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDSV 73
            +  VV+VTG S G+G   C   A+ G R+    A   +   ++   I + G        
Sbjct: 24  SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESG-------G 76

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            AVA+  DV  + A I          FGR+D LVNNAGI
Sbjct: 77  EAVAIPGDV-GNAADIAAMFSAVDRQFGRLDGLVNNAGI 114

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 77.6 bits (192), Expect = 9e-19
 Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 11/100 (11%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  KV +V+G + G+G      +   G ++V      +  K++  E+             
Sbjct: 5   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD----------A 54

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
           A  V LDV    A  + +V  A  AFG +  LVNNAGI  
Sbjct: 55  ARYVHLDV-TQPAQWKAAVDTAVTAFGGLHVLVNNAGILN 93

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 77.6 bits (192), Expect = 1e-18
 Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 9/100 (9%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L +KV ++TG + G+G        + G ++V A    D  + +C+ I  P          
Sbjct: 14  LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD--------V 65

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
              V  DV      +   V       G++D +  N G+  
Sbjct: 66  ISFVHCDV-TKDEDVRNLVDTTIAKHGKLDIMFGNVGVLS 104

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 76.8 bits (190), Expect = 1e-18
 Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 15/99 (15%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           DL  K  ++TGASSG+G      L K G +++ +    ++LKSL + +            
Sbjct: 11  DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL----------KD 60

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                  ++ A+                 +D LV NAGI
Sbjct: 61  NYTIEVCNL-ANKE----ECSNLISKTSNLDILVCNAGI 94

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 76.8 bits (190), Expect = 2e-18
 Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 9/100 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDS 72
            L  K   VTG S G+G      LA  G  +        +R +++  EI + G       
Sbjct: 28  SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG------- 80

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            RAVA+  D   D   IE ++++  EA G +D LVN+AGI
Sbjct: 81  GRAVAIRADN-RDAEAIEQAIRETVEALGGLDILVNSAGI 119

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 76.4 bits (189), Expect = 2e-18
 Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 11/98 (11%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  KV +VTG +SG+G E    L   G ++  +       + L  E+ +          R
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGE----------R 53

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           ++ V  DV +  A   + +       G ++ LVNNAGI
Sbjct: 54  SMFVRHDV-SSEADWTLVMAAVQRRLGTLNVLVNNAGI 90

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 76.5 bits (189), Expect = 2e-18
 Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 9/99 (9%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDSV 73
           L  KV + TGA  G+GR   ++L + G  +V          + +  E+ K G        
Sbjct: 19  LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG-------A 71

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           + VA++ D+ +  + +     KA   FG +D +++N+G+
Sbjct: 72  QGVAIQADI-SKPSEVVALFDKAVSHFGGLDFVMSNSGM 109

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 76.1 bits (188), Expect = 2e-18
 Identities = 37/98 (37%), Positives = 46/98 (46%), Gaps = 10/98 (10%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  K  +VTG++SG+G      LA+AG  IV              EI + G       V+
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGF--GDPAPALAEIARHG-------VK 52

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           AV    D+ +D A IE     A   FG VD LVNNAGI
Sbjct: 53  AVHHPADL-SDVAQIEALFALAEREFGGVDILVNNAGI 89

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 76.0 bits (188), Expect = 3e-18
 Identities = 22/99 (22%), Positives = 38/99 (38%), Gaps = 11/99 (11%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           +   K  +V G + G+G      L + G  ++   R    +  + +E             
Sbjct: 5   NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG----------P 54

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           R  A+  D+ AD   I +    A +  G +D L  NAG+
Sbjct: 55  RVHALRSDI-ADLNEIAVLGAAAGQTLGAIDLLHINAGV 92

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 76.1 bits (188), Expect = 3e-18
 Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 10/103 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKPGMVGSPDS 72
                  ++TG +  +G    + L + G R +V         + L  E+N         +
Sbjct: 8   ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR------A 61

Query: 73  VRAVAVELDVCADGATIEIS---VQKAWEAFGRVDALVNNAGI 112
             AV  + D+    + ++     +  ++ AFGR D LVNNA  
Sbjct: 62  GSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASA 104

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 75.7 bits (187), Expect = 4e-18
 Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 10/99 (10%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  K  +VTG+++G+G+     L   G  ++   RR + +     EI           +
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDA---IL 63

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           + V       AD  T +   Q   E + +VD L+NN GI
Sbjct: 64  QPVV------ADLGTEQ-GCQDVIEKYPKVDILINNLGI 95

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 75.5 bits (186), Expect = 4e-18
 Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 13/108 (12%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAK---AGCRIVAAARRVDRLKSLCDEINKPGMVGSPD 71
           L   V ++TGAS G GR     LA+    G  ++ +AR    L+ L +E+          
Sbjct: 4   LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQ-----P 58

Query: 72  SVRAVAVELDVCADGATIEISVQKAWEAFG----RVDALVNNAGIRGN 115
            ++ V    D+    A ++  +    E       +   L+NNA   G+
Sbjct: 59  DLKVVLAAADL-GTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGD 105

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 75.7 bits (187), Expect = 5e-18
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 9/99 (9%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDSV 73
           L  KV +VTGA  G+GRE  ++L + GC+++   A   +  + +   I K G        
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG-------S 79

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            A  V+ +V      I    ++A + FG++D + +N+G+
Sbjct: 80  DAACVKANV-GVVEDIVRMFEEAVKIFGKLDIVCSNSGV 117

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 75.7 bits (187), Expect = 5e-18
 Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 13/99 (13%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L+   +++TGAS  +G    L L + G R++ + R      +   E+ + G        
Sbjct: 24  TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYR---TEHASVTELRQAG-------- 72

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            AVA+  D  +    I   +         + A+V+NA  
Sbjct: 73  -AVALYGDF-SCETGIMAFIDLLKTQTSSLRAVVHNASE 109

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 75.7 bits (187), Expect = 6e-18
 Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 20/110 (18%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA------------ARRVDRLKSLCDEIN 62
           +  KV  +TGA+ G GR   + LA+ G  I+A                 D L     ++ 
Sbjct: 26  VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85

Query: 63  KPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             G        R +A ++DV  D   ++ +V       GR+D ++ NA +
Sbjct: 86  ALG-------RRIIASQVDV-RDFDAMQAAVDDGVTQLGRLDIVLANAAL 127

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 75.8 bits (187), Expect = 7e-18
 Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 20/110 (18%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVA------------AARRVDRLKSLCDEIN 62
           L  KV  +TGA+ G GR   + LA+ G  IVA            A    + LK     + 
Sbjct: 44  LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE 103

Query: 63  KPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           + G        R +A + DV  D A+++  V +A   FG +D LV+N GI
Sbjct: 104 EQG-------RRIIARQADV-RDLASLQAVVDEALAEFGHIDILVSNVGI 145

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 74.1 bits (183), Expect = 7e-18
 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 19/93 (20%)

Query: 20  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVE 79
           V++TGA+ GLG       A  G  ++ + RR   L  L  E+             A A+ 
Sbjct: 3   VLITGATGGLGGA--FARALKGHDLLLSGRRAGALAELAREV------------GARALP 48

Query: 80  LDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            D+ AD        +   E  G +D LV+  G 
Sbjct: 49  ADL-ADEL----EAKALLEEAGPLDLLVHAVGK 76

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 75.3 bits (186), Expect = 8e-18
 Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 20/110 (18%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA------------ARRVDRLKSLCDEIN 62
           L  KV  +TGA+ G GR   + LA  G  I+A                 + L +    + 
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70

Query: 63  KPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             G        R VA + DV  D  ++  ++Q   +  GR+D +V NAGI
Sbjct: 71  DIG-------SRIVARQADV-RDRESLSAALQAGLDELGRLDIVVANAGI 112

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 75.0 bits (185), Expect = 8e-18
 Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 11/99 (11%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  +V +VTGASSGLG      LA+ G  ++    +    +    E+            
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELG----------A 53

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                  DV  + A    ++  A + FG V  LVN AG 
Sbjct: 54  AVRFRNADV-TNEADATAALAFAKQEFGHVHGLVNCAGT 91

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 74.5 bits (184), Expect = 9e-18
 Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 18/99 (18%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           D + K V VTGA  G+G    L   +AG ++    +   +                    
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE-----------------QY 46

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                 +DV AD A +    Q+      R+DALVN AGI
Sbjct: 47  PFATEVMDV-ADAAQVAQVCQRLLAETERLDALVNAAGI 84

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 76.3 bits (188), Expect = 1e-17
 Identities = 40/114 (35%), Positives = 53/114 (46%), Gaps = 32/114 (28%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIV---------------AAARRVDRLKSLC 58
           D  +KVV++TGA  GLG+ + L+ AK G ++V                AA  V       
Sbjct: 5   DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVV------V 58

Query: 59  DEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           DEI K G         AVA   +V  DG  I   V+ A + FG V  ++NNAGI
Sbjct: 59  DEIVKNG-------GVAVADYNNV-LDGDKI---VETAVKNFGTVHVIINNAGI 101

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 70.1 bits (172), Expect = 2e-15
 Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 20/103 (19%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIV----AAARRVDRLKSLCDEINKPGMVGS 69
            L +KVV++TGA +GLG+E+    AK G ++V      A +        DEI   G    
Sbjct: 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKT------VDEIKAAG---- 368

Query: 70  PDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                A   + DV  D   I   ++   + +G +D LVNNAGI
Sbjct: 369 ---GEAWPDQHDVAKDSEAI---IKNVIDKYGTIDILVNNAGI 405

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 75.1 bits (185), Expect = 1e-17
 Identities = 39/108 (36%), Positives = 51/108 (47%), Gaps = 18/108 (16%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIV----------AAARRVDRLKSLCDEINKP 64
           ++ +VV+VTGA  G+GR   L  A  G R+V          + A      +S+ DEI   
Sbjct: 25  VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA 84

Query: 65  GMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           G         AVA   +V AD       +Q A E FG +D LVNNAGI
Sbjct: 85  G-------GEAVADGSNV-ADWDQAAGLIQTAVETFGGLDVLVNNAGI 124

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 74.1 bits (183), Expect = 1e-17
 Identities = 16/95 (16%), Positives = 29/95 (30%), Gaps = 14/95 (14%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
              +VT      G    L L++AG  +        +   L             ++     
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL-------------EAFAETY 48

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            +L            ++    A+G+VD LV+N   
Sbjct: 49  PQLKP-MSEQEPAELIEAVTSAYGQVDVLVSNDIF 82

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 74.1 bits (183), Expect = 1e-17
 Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 21/112 (18%)

Query: 1   MASQVSDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE 60
           M +  ++  +P      + V+VTG + G+G      LA  G ++    R           
Sbjct: 1   MTATATEGAKP--PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHR----------- 47

Query: 61  INKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                  GS        VE+DV  D   ++ +     E  G V+ LV+NAG+
Sbjct: 48  -------GSGAPKGLFGVEVDV-TDSDAVDRAFTAVEEHQGPVEVLVSNAGL 91

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 74.6 bits (184), Expect = 2e-17
 Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 20/110 (18%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA------------ARRVDRLKSLCDEIN 62
           + +KVV+VTG + G GR   + LA+ G  I+                    L+    E+ 
Sbjct: 8   VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE 67

Query: 63  KPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           K G        +A   E+DV  D A +   +  A   FG++D +V NAGI
Sbjct: 68  KTG-------RKAYTAEVDV-RDRAAVSRELANAVAEFGKLDVVVANAGI 109

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 74.1 bits (183), Expect = 2e-17
 Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 19/99 (19%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
               KV +VTGA+ G+G      L  AG R+  A R V  +                   
Sbjct: 25  GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA------------------ 66

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             + +  D+  + A  +          GR+D +VNNAG+
Sbjct: 67  ADLHLPGDL-REAAYADGLPGAVAAGLGRLDIVVNNAGV 104

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 74.1 bits (183), Expect = 2e-17
 Identities = 28/111 (25%), Positives = 40/111 (36%), Gaps = 21/111 (18%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA-------------ARRVDRLKSLCDEI 61
           L  +V  +TGA+ G GR   + +A  G  I+A                  D L      +
Sbjct: 9   LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68

Query: 62  NKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                       R VA  +D   D   +   V     A GR+D +V NAG+
Sbjct: 69  EAAN-------RRIVAAVVDT-RDFDRLRKVVDDGVAALGRLDIIVANAGV 111

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 74.2 bits (183), Expect = 2e-17
 Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 15/99 (15%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
              ++ V++TGA+SGLG     +LA+ G  ++ A R   + ++    +            
Sbjct: 13  SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAG---------- 62

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +    ELD+  D +    SV++  +     D L+NNAGI
Sbjct: 63  QVEVRELDL-QDLS----SVRRFADGVSGADVLINNAGI 96

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 73.7 bits (182), Expect = 3e-17
 Identities = 31/111 (27%), Positives = 44/111 (39%), Gaps = 21/111 (18%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA-------------ARRVDRLKSLCDEI 61
           L  +V  +TGA+ G GR   + LA  G  I+A                  + L      +
Sbjct: 13  LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV 72

Query: 62  NKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
              G        +A+   LDV  D A +   V    E FGR+D +V NAG+
Sbjct: 73  EDQG-------RKALTRVLDV-RDDAALRELVADGMEQFGRLDVVVANAGV 115

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 73.8 bits (182), Expect = 3e-17
 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 9/99 (9%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDSV 73
           L+ KV +VTG+  G+G    + L + G ++V   A      + +  EI   G        
Sbjct: 16  LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG-------S 68

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            A+A++ D+      I     +A   FG +D  V+N+G+
Sbjct: 69  DAIAIKADI-RQVPEIVKLFDQAVAHFGHLDIAVSNSGV 106

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 74.3 bits (183), Expect = 3e-17
 Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 32/114 (28%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIV---------------AAARRVDRLKSLC 58
             + +VV+VTGA  GLGR + L  A+ G  +V               +AA +V       
Sbjct: 6   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKV------V 59

Query: 59  DEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +EI + G        +AVA    V   G  +   V+ A + FGR+D +VNNAGI
Sbjct: 60  EEIRRRG-------GKAVANYDSV-EAGEKL---VKTALDTFGRIDVVVNNAGI 102

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 73.4 bits (181), Expect = 3e-17
 Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 18/99 (18%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           +  +KV +VTG SSG+G      L + G ++V+ +       ++                
Sbjct: 11  EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNV---------------- 54

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            +   ++DV  +   ++ +V+K  + +GR+D LVNNAGI
Sbjct: 55  -SDHFKIDV-TNEEEVKEAVEKTTKKYGRIDILVNNAGI 91

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 73.7 bits (182), Expect = 3e-17
 Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 20/111 (18%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVA------------AARRVDRLKSLCDEI 61
           D   K  ++TG + G+GR   + LA+AG  I                   D L      +
Sbjct: 7   DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALV 66

Query: 62  NKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            K G        R ++ ++DV  D A +E  V +A +  G +D  + NAGI
Sbjct: 67  EKTG-------RRCISAKVDV-KDRAALESFVAEAEDTLGGIDIAITNAGI 109

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 73.3 bits (181), Expect = 3e-17
 Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 14/98 (14%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
              K V+VTG + G+GR      A+ G  +     R +  +               +++ 
Sbjct: 4   FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA-------------EAIG 50

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               ++D+  D       V++A  A GRVD LVNNA I
Sbjct: 51  GAFFQVDL-EDERERVRFVEEAAYALGRVDVLVNNAAI 87

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 73.6 bits (181), Expect = 3e-17
 Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 9/101 (8%)

Query: 16  NEKVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
              V +VTG + G+G     DL +     +V  AR V R ++   ++   G       + 
Sbjct: 3   GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG-------LS 55

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
               +LD+  D  +I        + +G +D LVNNAGI   
Sbjct: 56  PRFHQLDI-DDLQSIRALRDFLRKEYGGLDVLVNNAGIAFK 95

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 73.1 bits (180), Expect = 4e-17
 Identities = 24/99 (24%), Positives = 36/99 (36%), Gaps = 11/99 (11%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            +   V ++TG +SGLG      L   G   V         ++   ++            
Sbjct: 9   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG----------N 58

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             V    DV      ++ ++  A   FGRVD  VN AGI
Sbjct: 59  NCVFAPADV-TSEKDVQTALALAKGKFGRVDVAVNCAGI 96

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 73.0 bits (180), Expect = 5e-17
 Identities = 22/99 (22%), Positives = 38/99 (38%), Gaps = 19/99 (19%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
               + V+VTG + G+G       A AG ++    R                        
Sbjct: 18  SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYR------------------SGEPPE 59

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             +AV+ D+  D   +E + ++  E  G V+ L+ NAG+
Sbjct: 60  GFLAVKCDI-TDTEQVEQAYKEIEETHGPVEVLIANAGV 97

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 72.6 bits (179), Expect = 5e-17
 Identities = 28/114 (24%), Positives = 39/114 (34%), Gaps = 25/114 (21%)

Query: 1   MASQVSDHLEPWHDLN--EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC 58
           M S    H     +L   +K V+V  AS G+GR     L++ G  +   AR  + LK   
Sbjct: 1   MGSDKIHHHHHHMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK--- 57

Query: 59  DEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                                  VC     +   +   +E    VD LV NAG 
Sbjct: 58  ----------------RSGHRYVVCD----LRKDLDLLFEKVKEVDILVLNAGG 91

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 73.6 bits (181), Expect = 6e-17
 Identities = 25/116 (21%), Positives = 36/116 (31%), Gaps = 23/116 (19%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKPGMVGSPDS 72
                V +VTGA+  LGR     L   G  + +   R      +L   +N          
Sbjct: 43  APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR------P 96

Query: 73  VRAVAVELDVCADGATIEIS----------------VQKAWEAFGRVDALVNNAGI 112
             A+ V+ D+                          V   +  +GR D LVNNA  
Sbjct: 97  NSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASS 152

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 73.2 bits (180), Expect = 6e-17
 Identities = 25/116 (21%), Positives = 36/116 (31%), Gaps = 23/116 (19%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKSLCDEINKPGMVGSPDS 72
                V +VTGA+  LGR     L   G  + +   R      +L   +N          
Sbjct: 6   APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR------P 59

Query: 73  VRAVAVELDVCADGATIEIS----------------VQKAWEAFGRVDALVNNAGI 112
             A+ V+ D+                          V   +  +GR D LVNNA  
Sbjct: 60  NSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASS 115

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 72.6 bits (179), Expect = 7e-17
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 19/99 (19%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           DL +KVV+VTGAS G+GR         G +++  +                     P   
Sbjct: 5   DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIH------------------DPGEA 46

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +   +E DV  +   ++ S+   ++ +G +  LVNNAGI
Sbjct: 47  KYDHIECDV-TNPDQVKASIDHIFKEYGSISVLVNNAGI 84

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 72.2 bits (178), Expect = 1e-16
 Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 24/114 (21%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA----------------ARRVDRLKSLC 58
           +  KV  VTGA+ G GR   + LA+ G  I+A                 A   + L    
Sbjct: 9   VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68

Query: 59  DEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           D +            R V  E+DV  D   ++ +V    E  GR+D +V NAGI
Sbjct: 69  DLVKGHN-------RRIVTAEVDV-RDYDALKAAVDSGVEQLGRLDIIVANAGI 114

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 71.2 bits (175), Expect = 2e-16
 Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 11/99 (11%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
                  +V+G + GLG      L   G  +V A    ++ K+L DE+            
Sbjct: 27  QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGN---------- 76

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           RA  V  +V     ++  +++ A +      A+V + G 
Sbjct: 77  RAEFVSTNV-TSEDSVLAAIEAANQLGRLRYAVVAHGGF 114

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 69.8 bits (172), Expect = 5e-16
 Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 17/98 (17%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L+ KV+++T A+ G+G+   L  A+ G +++A      +L+ L                 
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPG------------ 51

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                LDV     T +  + +      R+D L N AG 
Sbjct: 52  IQTRVLDV-----TKKKQIDQFANEVERLDVLFNVAGF 84

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 69.6 bits (171), Expect = 8e-16
 Identities = 18/107 (16%), Positives = 30/107 (28%), Gaps = 20/107 (18%)

Query: 6   SDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPG 65
           S  L P      K ++V G S  LG E            ++   R               
Sbjct: 11  SSGLVPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFR--------------- 55

Query: 66  MVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                +     +  +   +    I+  ++K      +VD  V  AG 
Sbjct: 56  ----ENPNADHSFTIKD-SGEEEIKSVIEKINSKSIKVDTFVCAAGG 97

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 67.1 bits (165), Expect = 5e-15
 Identities = 18/96 (18%), Positives = 29/96 (30%), Gaps = 16/96 (16%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRL-KSLCDEINKPGMVGSPDSVRAV 76
            + +VT A    G      L + G  +V          +    E   PG         A+
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPG-------TIAL 54

Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           A +          E  V    +    +D +V+N  I
Sbjct: 55  AEQ--------KPERLVDATLQHGEAIDTIVSNDYI 82

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 67.2 bits (165), Expect = 5e-15
 Identities = 27/105 (25%), Positives = 39/105 (37%), Gaps = 15/105 (14%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           L  KV +VTGAS G+GR     LA  G    +    R +  +    EI   G        
Sbjct: 5   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNG-------G 57

Query: 74  RAVAVELDVCADGATIEISVQKAWEAF------GRVDALVNNAGI 112
            A ++  ++      +E                 + D L+NNAGI
Sbjct: 58  SAFSIGANL-ESLHGVEALYSSLDNELQNRTGSTKFDILINNAGI 101

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 65.7 bits (161), Expect = 3e-14
 Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 22/106 (20%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIV--------AAARRVDRLKSLCDEINKPGM 66
           L ++  +VTG  SG+GR   +  A+ G  +           A++V  L      I + G 
Sbjct: 47  LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKAL------IEECG- 99

Query: 67  VGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                  +AV +  D+ +D +     V KA EA G +D L   AG 
Sbjct: 100 ------RKAVLLPGDL-SDESFARSLVHKAREALGGLDILALVAGK 138

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 64.9 bits (159), Expect = 4e-14
 Identities = 15/95 (15%), Positives = 25/95 (26%), Gaps = 19/95 (20%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
              +VTG S G+G+     L +     V                          +     
Sbjct: 5   ANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF----------------SAENLKF 48

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           ++ D+      I   +          D +  NAGI
Sbjct: 49  IKADL-TKQQDITNVLDII--KNVSFDGIFLNAGI 80

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 65.4 bits (160), Expect = 5e-14
 Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 16/101 (15%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR--VDRLKSLCDEINKPGMVGSPDS 72
           L+ KV +VTGA+ G+G       A+ G  +VA       + LK + D++           
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVG---------- 260

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFG-RVDALVNNAGI 112
               A+ LDV      ++       E  G +VD LVNNAGI
Sbjct: 261 --GTALTLDV-TADDAVDKITAHVTEHHGGKVDILVNNAGI 298

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 64.1 bits (157), Expect = 1e-13
 Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 21/105 (20%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIV-------AAARRVDRLKSLCDEINKPGMV 67
           L  K V++TG  SG+GR   +  AK G  I          A    +       + K G  
Sbjct: 45  LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQY------VEKEG-- 96

Query: 68  GSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                V+ V +  D+ +D    +  VQ+     G ++ LVNN   
Sbjct: 97  -----VKCVLLPGDL-SDEQHCKDIVQETVRQLGSLNILVNNVAQ 135

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 63.4 bits (155), Expect = 2e-13
 Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 15/99 (15%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           ++ + V +VTG +SGLG      L  AG ++V    R +    +  ++            
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGE---DVVADLG----------D 52

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           RA     DV  D A +  ++  A E  G +  +VN AG 
Sbjct: 53  RARFAAADV-TDEAAVASALDLA-ETMGTLRIVVNCAGT 89

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 63.1 bits (154), Expect = 2e-13
 Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 15/101 (14%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRA 75
             V+VTGA+ G+G      L K      I+A AR V++   L    +           R 
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDS----------RV 53

Query: 76  VAVELDVCADGATIEISVQKAWEAFGR--VDALVNNAGIRG 114
             + L V     +++  V K  E  G   +  L+NNAG+  
Sbjct: 54  HVLPLTV-TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLL 93

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 61.6 bits (150), Expect = 7e-13
 Identities = 20/102 (19%), Positives = 37/102 (36%), Gaps = 14/102 (13%)

Query: 16  NEKVVMVTGASSGLGREFC---LDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDS 72
           +   +++TG + GLG       L+L +    +    R  ++ K L D             
Sbjct: 20  HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHS------- 72

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFG--RVDALVNNAGI 112
                +E+D+  +    +  V           ++ L NNAGI
Sbjct: 73  -NIHILEIDL-RNFDAYDKLVADIEGVTKDQGLNVLFNNAGI 112

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 59.5 bits (145), Expect = 3e-12
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 21/96 (21%)

Query: 17  EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
           E+  +VTG +SGLGR   L L   G R+V              ++ + G          +
Sbjct: 2   ERSALVTGGASGLGRAAALALKARGYRVVVL------------DLRREG-------EDLI 42

Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            VE DV      +  +V +A +    + A+V+ AG+
Sbjct: 43  YVEGDV-TREEDVRRAVARA-QEEAPLFAVVSAAGV 76

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 59.9 bits (145), Expect = 4e-12
 Identities = 18/95 (18%), Positives = 32/95 (33%), Gaps = 9/95 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINK-------PGM 66
            +  K  +V   +  +G      LA  G  +V   R++D+ ++  D +NK          
Sbjct: 116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAE 175

Query: 67  VGSPDSVRAV--AVELDVCADGATIEISVQKAWEA 99
                S             A    +E+  Q AW+ 
Sbjct: 176 TADDASRAEAVKGAHFVFTAGAIGLELLPQAAWQN 210

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 59.2 bits (144), Expect = 6e-12
 Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 14/99 (14%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
            V+ +TG++SG+G      LA+AG  ++   R    +++          + +P   R  A
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEAD---------LSTPGG-RETA 51

Query: 78  VELDVCADGATIEISVQKA----WEAFGRVDALVNNAGI 112
           V   +   G  ++  V  A      A   +   VN  G+
Sbjct: 52  VAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGV 90

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 58.5 bits (142), Expect = 9e-12
 Identities = 12/98 (12%), Positives = 26/98 (26%), Gaps = 16/98 (16%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           ++   V+V G    LG        K G  ++      +        +   G     +  +
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILV--DGNKNWTEQEQ 58

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           ++                   +     +VD +   AG 
Sbjct: 59  SILE--------------QTASSLQGSQVDGVFCVAGG 82

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 58.5 bits (142), Expect = 9e-12
 Identities = 16/97 (16%), Positives = 30/97 (30%), Gaps = 24/97 (24%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
            +++++G ++G+G      L  AG +IV                            R   
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDI------------------------RDAE 37

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
           V  D+       +       +    +D LV  AG+  
Sbjct: 38  VIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGP 74

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 55.4 bits (134), Expect = 8e-11
 Identities = 20/97 (20%), Positives = 35/97 (36%), Gaps = 30/97 (30%)

Query: 16  NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRA 75
           N   +++ GAS  LG      L      ++ A R                         +
Sbjct: 2   NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRH------------------------S 36

Query: 76  VAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             V +D+  +      S++K +E  G+VDA+V+  G 
Sbjct: 37  GDVTVDI-TNID----SIKKMYEQVGKVDAIVSATGS 68

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 55.0 bits (133), Expect = 1e-10
 Identities = 13/95 (13%), Positives = 24/95 (25%), Gaps = 16/95 (16%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           + V+V G    LG             + +     +                   +   V 
Sbjct: 8   RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE---------------ASASVIVK 52

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +          +   V K      +VDA++  AG 
Sbjct: 53  MTDSFTEQADQVTAEVGKL-LGDQKVDAILCVAGG 86

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 39.2 bits (90), Expect = 5e-05
 Identities = 9/36 (25%), Positives = 15/36 (41%), Gaps = 14/36 (38%)

Query: 60 EINKPGMVGS-----PDSVRAVAVELDVCADGATIE 90
           + K  +  S      DS  A+A++       AT+E
Sbjct: 21 ALKK--LQASLKLYADDSAPALAIK-------ATME 47

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	115
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.92
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.92
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.9
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.89
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.88
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.88
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.87
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.87
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.87
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.87
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.87
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.87
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.87
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.86
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.86
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.86
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.86
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.86
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.86
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.86
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.86
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.86
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.86
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.86
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.86
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.86
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.86
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.86
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.86
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.85
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.85
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.85
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.85
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.85
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.85
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.85
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.85
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.85
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.85
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.85
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.85
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.85
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.85
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.85
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.85
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.85
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.85
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.85
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.85
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.85
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.85
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.85
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.85
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.85
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.84
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.84
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.84
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.84
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.84
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.84
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.84
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.84
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.84
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.84
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.84
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.84
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.84
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.84
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.84
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.84
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.84
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.84
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.84
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.84
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.84
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.84
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.84
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.84
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.84
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.84
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.83
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.83
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.83
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.83
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.83
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.83
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.83
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.83
1spx_A	278	Short-chain reductase family member (5L265); paral	99.83
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.83
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.83
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.83
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.83
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.83
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.83
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.83
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.83
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.83
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.83
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.83
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.82
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.82
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.82
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.82
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.82
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.82
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.82
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.82
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.82
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.82
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.82
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.82
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.82
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.82
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.82
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.81
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.81
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.81
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.81
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.81
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.81
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.81
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.81
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.81
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.81
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.81
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.81
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.81
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.81
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.81
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.81
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.81
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.81
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.81
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.81
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.8
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.8
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.8
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.8
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.8
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.8
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.8
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.8
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.8
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.8
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.8
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.8
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.8
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.8
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.8
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.8
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.79
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.79
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.79
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.79
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.79
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.79
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.79
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.79
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.79
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.79
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.78
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.78
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.78
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.78
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.78
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.78
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.78
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.78
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.78
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.77
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.77
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.77
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.77
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.77
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.77
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.77
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.76
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.76
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.76
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.75
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.74
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.74
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.74
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.74
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.73
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.73
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.73
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.72
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.72
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.72
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.71
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.71
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.71
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.7
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.7
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.7
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.7
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.69
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.69
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.68
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.67
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.66
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.66
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.65
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.65
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.65
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.64
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.64
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.64
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.64
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.63
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.63
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.62
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.62
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.62
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.61
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.59
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.57
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.56
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.55
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.55
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.55
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.54
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.53
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.53
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.51
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.51
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.51
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.49
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.49
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.49
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.48
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.47
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.46
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.45
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.45
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.43
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.43
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.43
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.42
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.42
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.42
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.42
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.41
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.41
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.4
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.4
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.39
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.38
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.38
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.38
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.37
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.37
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.37
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.37
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.36
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.35
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.34
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.34
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.34
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.34
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.33
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.33
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.32
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.31
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.31
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.3
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.3
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.29
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.29
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.28
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.28
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.28
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.27
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.26
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.26
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.25
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.24
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.24
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.23
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.23
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.23
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.22
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.21
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.21
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.21
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.2
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.2
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.19
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.19
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.18
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	99.17
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.17
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.16
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.15
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.15
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.14
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.13
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.12
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.11
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.11
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.1
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.09
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.09
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	99.08
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.07
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.07
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.06
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.06
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	99.05
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.03
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	98.98
4f6l_B	508	AUSA reductase domain protein; thioester reductase	98.98
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	98.95
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	98.94
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	98.93
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.91
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	98.9
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.88
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.85
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.84
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.69
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.69
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	98.67
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.66
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.65
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.65
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.63
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.62
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.61
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.61
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.6
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	98.59
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.59
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.57
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.57
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.54
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.53
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.46
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.45
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.45
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.45
4eye_A	342	Probable oxidoreductase; structural genomics, niai	98.41
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.39
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.38
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.35
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.33
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.3
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.28
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.28
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	98.28
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	98.27
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	98.23
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.22
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.18
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	98.18
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.17
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	98.17
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	98.17
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.15
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	98.13
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.05
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.05
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	98.04
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	98.02
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.97
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.96
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.95
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.95
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.94
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.94
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.91
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.89
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.88
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.87
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.85
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.85
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.85
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.8
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.8
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.76
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.76
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.75
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.74
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.68
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.65
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.63
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.62
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.61
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.6
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.58
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.57
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.57
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.55
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	97.54
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	97.52
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.52
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.5
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.5
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	97.49
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	97.49
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.47
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	97.47
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.46
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.45
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.44
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.42
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	97.42
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	97.41
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.41
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.41
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	97.37
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.37
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.37
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	97.35
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.34
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.32
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.29
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	97.29
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.29
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.27
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.24
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	97.23
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	97.22
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	97.2
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.17
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	97.16
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	97.16
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.15
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	97.14
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	97.14
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.13
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.12
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	97.09
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	97.08
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.07
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	97.05
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	96.99
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.97
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	96.97
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.97
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.95
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.95
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.94
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.92
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.89
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.89
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.88
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.87
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.84
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.83
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.79
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.78
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.75
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.75
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.75
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.74
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.73
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.72
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.7
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.68
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.68
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	96.65
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.61
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.59
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	96.58
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.57
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	96.55
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.54
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	96.54
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.54
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.53
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.52
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.52
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.51
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	96.51
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	96.48
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	96.47
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	96.42
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	96.41
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	96.4
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.39
1lnq_A	336	MTHK channels, potassium channel related protein;	96.38
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	96.36
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.36
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.34
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	96.33
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	96.32
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.32
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	96.32
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	96.31
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.28
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	96.26
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.26
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.24
3ado_A	319	Lambda-crystallin; L-gulonate 3-dehydrogenase, str	96.24
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	96.24
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.18
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.17

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.92  E-value=1e-24  Score=144.31  Aligned_cols=95  Identities=36%  Similarity=0.571  Sum_probs=88.0

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      +.+|+||+++|||+++|||+++|+.|+++|++|++++|+.+.+++..++++..+       .++.++.+|++ ++++++.
T Consensus         2 y~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g-------~~~~~~~~Dvt-~~~~v~~   73 (254)
T 4fn4_A            2 YQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG-------KEVLGVKADVS-KKKDVEE   73 (254)
T ss_dssp             CGGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTT-SHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC-------CcEEEEEccCC-CHHHHHH
Confidence            457899999999999999999999999999999999999999999999998654       57899999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++++.+++|+||+||||||+.+
T Consensus        74 ~~~~~~~~~G~iDiLVNNAGi~~   96 (254)
T 4fn4_A           74 FVRRTFETYSRIDVLCNNAGIMD   96 (254)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCcccC
Confidence            99999999999999999999753

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.92  E-value=1e-24  Score=144.37  Aligned_cols=96  Identities=35%  Similarity=0.462  Sum_probs=88.5

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      .+++++||+++|||+++|||+++|+.|+++|++|++++|+.+.+++..++++..+       .++..+.+|++ ++++++
T Consensus         3 ~~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g-------~~~~~~~~Dv~-~~~~v~   74 (255)
T 4g81_D            3 ALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG-------YDAHGVAFDVT-DELAIE   74 (255)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT-------CCEEECCCCTT-CHHHHH
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------CcEEEEEeeCC-CHHHHH
Confidence            4568899999999999999999999999999999999999999999988888654       57889999996 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccCC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      .+++++.+++++||+||||||+..
T Consensus        75 ~~~~~~~~~~G~iDiLVNNAG~~~   98 (255)
T 4g81_D           75 AAFSKLDAEGIHVDILINNAGIQY   98 (255)
T ss_dssp             HHHHHHHHTTCCCCEEEECCCCCC
T ss_pred             HHHHHHHHHCCCCcEEEECCCCCC
Confidence            999999999999999999999864

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.90  E-value=9.1e-23  Score=136.14  Aligned_cols=90  Identities=32%  Similarity=0.444  Sum_probs=82.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .|+||+++|||+++|||+++|+.|++.|++|++++|+.+.+++..+++.          .++..+.+|++ ++++++.++
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g----------~~~~~~~~Dv~-~~~~v~~~~   94 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG----------GGAVGIQADSA-NLAELDRLY   94 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----------TTCEEEECCTT-CHHHHHHHH
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC----------CCeEEEEecCC-CHHHHHHHH
Confidence            5889999999999999999999999999999999999998888887773          46778999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+++|+||+||||||+..
T Consensus        95 ~~~~~~~G~iDiLVNNAG~~~  115 (273)
T 4fgs_A           95 EKVKAEAGRIDVLFVNAGGGS  115 (273)
T ss_dssp             HHHHHHHSCEEEEEECCCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCCC
Confidence            999999999999999999853

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.89  E-value=2e-22  Score=133.39  Aligned_cols=96  Identities=15%  Similarity=0.218  Sum_probs=85.5

Q ss_pred             CCCCCCcEEEEecCCC--hHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHH
Q 033624           12 WHDLNEKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATI   89 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~   89 (115)
                      |.+|+||+++|||+++  |||+++|+.|+++|++|++++|+.+..++..+.+++.+      ..++.++++|++ +++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~-~~~~v   73 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN------QPEAHLYQIDVQ-SDEEV   73 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT------CSSCEEEECCTT-CHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------CCcEEEEEccCC-CHHHH
Confidence            3578999999999764  99999999999999999999999998888888887643      246889999996 89999


Q ss_pred             HHHHHHHHHHcCCccEEEeCCccCC
Q 033624           90 EISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        90 ~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +.+++++.++++++|+||||||+.+
T Consensus        74 ~~~~~~~~~~~G~iD~lvnnAg~~~   98 (256)
T 4fs3_A           74 INGFEQIGKDVGNIDGVYHSIAFAN   98 (256)
T ss_dssp             HHHHHHHHHHHCCCSEEEECCCCCC
T ss_pred             HHHHHHHHHHhCCCCEEEecccccc
Confidence            9999999999999999999999753

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.88  E-value=5.1e-22  Score=131.67  Aligned_cols=93  Identities=33%  Similarity=0.474  Sum_probs=80.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .+|+||+++|||+++|||+++|+.|+++|++|++++|+.+.... .+++.+.+       .++.++.+|++ ++++++.+
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~-~~~~~~~~-------~~~~~~~~Dv~-~~~~v~~~   73 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAF-LDALAQRQ-------PRATYLPVELQ-DDAQCRDA   73 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHH-HHHHHHHC-------TTCEEEECCTT-CHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHH-HHHHHhcC-------CCEEEEEeecC-CHHHHHHH
Confidence            36889999999999999999999999999999999998876543 34444333       46889999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+++|+||+||||||+..
T Consensus        74 v~~~~~~~G~iDiLVNnAGi~~   95 (258)
T 4gkb_A           74 VAQTIATFGRLDGLVNNAGVND   95 (258)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHhCCCCEEEECCCCCC
Confidence            9999999999999999999853

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.88  E-value=1.1e-21  Score=130.10  Aligned_cols=97  Identities=30%  Similarity=0.516  Sum_probs=87.4

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      ++.++.+|+++|||+++|||++++++|+++|++|++++|+.+..++..++++..+      ..++.++.+|++ ++++++
T Consensus         4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~~Dv~-~~~~v~   76 (262)
T 3pk0_A            4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG------SGKVIGVQTDVS-DRAQCD   76 (262)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS------SSCEEEEECCTT-SHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC------CCcEEEEEcCCC-CHHHHH
Confidence            4567889999999999999999999999999999999999999888888887643      247889999996 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccCC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      .+++++.++++++|+||||||+..
T Consensus        77 ~~~~~~~~~~g~id~lvnnAg~~~  100 (262)
T 3pk0_A           77 ALAGRAVEEFGGIDVVCANAGVFP  100 (262)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCC
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCC
Confidence            999999999999999999999864

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.87  E-value=3.4e-21  Score=129.71  Aligned_cols=97  Identities=33%  Similarity=0.517  Sum_probs=87.1

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      .+.++.+|+++|||+++|||++++++|+++|++|++++|+.+..++..+++...+      ..++.++.+|++ ++++++
T Consensus        35 ~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~~Dv~-d~~~v~  107 (293)
T 3rih_A           35 VMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG------AGNVIGVRLDVS-DPGSCA  107 (293)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS------SSCEEEEECCTT-CHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC------CCcEEEEEEeCC-CHHHHH
Confidence            3566789999999999999999999999999999999999999988888887543      246889999996 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccCC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      .+++++.+.++++|+||||||+..
T Consensus       108 ~~~~~~~~~~g~iD~lvnnAg~~~  131 (293)
T 3rih_A          108 DAARTVVDAFGALDVVCANAGIFP  131 (293)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCC
Confidence            999999999999999999999864

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.87  E-value=3.3e-21  Score=127.36  Aligned_cols=94  Identities=34%  Similarity=0.576  Sum_probs=85.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .++.+|+++|||+++|||++++++|+++|++|++++|+.+..++..++++..+       .++.++.+|++ ++++++.+
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~-d~~~v~~~   79 (256)
T 3gaf_A            8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG-------GKAIGLECNVT-DEQHREAV   79 (256)
T ss_dssp             TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT-------CCEEEEECCTT-CHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEECCCC-CHHHHHHH
Confidence            46789999999999999999999999999999999999988888888887543       57889999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+.++++|+||||||+..
T Consensus        80 ~~~~~~~~g~id~lv~nAg~~~  101 (256)
T 3gaf_A           80 IKAALDQFGKITVLVNNAGGGG  101 (256)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCCCC
Confidence            9999999999999999999864

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.87  E-value=3.2e-21  Score=128.76  Aligned_cols=94  Identities=34%  Similarity=0.527  Sum_probs=85.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .++.+|+++|||+++|||++++++|+++|++|++++|+.+..++..++++..+       .++.++.+|++ ++++++.+
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~-d~~~v~~~   99 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG-------GKALPIRCDVT-QPDQVRGM   99 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT-------CCCEEEECCTT-CHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CeEEEEEcCCC-CHHHHHHH
Confidence            46789999999999999999999999999999999999998888888887543       46889999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+.++++|+||||||+..
T Consensus       100 ~~~~~~~~g~iD~lvnnAg~~~  121 (276)
T 3r1i_A          100 LDQMTGELGGIDIAVCNAGIVS  121 (276)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCCCC
Confidence            9999999999999999999864

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.87  E-value=4.3e-21  Score=128.55  Aligned_cols=95  Identities=35%  Similarity=0.507  Sum_probs=83.5

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      ++.++.+++++|||+++|||+++|++|+++|++|++++|+.+.+++..+++...+       .++.++.+|++ ++++++
T Consensus        22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dv~-d~~~v~   93 (283)
T 3v8b_A           22 SMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG-------GQAIALEADVS-DELQMR   93 (283)
T ss_dssp             -----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTT-------CCEEEEECCTT-CHHHHH
T ss_pred             hhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEEccCC-CHHHHH
Confidence            3456789999999999999999999999999999999999999888888887543       57889999996 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .+++++.+.++++|+||||||+.
T Consensus        94 ~~~~~~~~~~g~iD~lVnnAg~~  116 (283)
T 3v8b_A           94 NAVRDLVLKFGHLDIVVANAGIN  116 (283)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHHhCCCCEEEECCCCC
Confidence            99999999999999999999985

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.87  E-value=4e-21  Score=126.94  Aligned_cols=92  Identities=35%  Similarity=0.545  Sum_probs=84.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+|+++|||+++|||++++++|+++|++|++++|+.+..++..++++..+       .++.++.+|++ ++++++.++
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~-~~~~v~~~~   74 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFP-------GQILTVQMDVR-NTDDIQKMI   74 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCST-------TCEEEEECCTT-CHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEEccCC-CHHHHHHHH
Confidence            5679999999999999999999999999999999999999988888886543       57889999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|+||||||+.
T Consensus        75 ~~~~~~~g~id~lv~nAg~~   94 (257)
T 3imf_A           75 EQIDEKFGRIDILINNAAGN   94 (257)
T ss_dssp             HHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCC
Confidence            99999999999999999975

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.87  E-value=3.6e-21  Score=127.92  Aligned_cols=92  Identities=39%  Similarity=0.636  Sum_probs=84.0

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +++|+++|||+++|||++++++|+++|++|++++|+.+.+++..++++..+       .++.++.+|++ ++++++.+++
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dv~-d~~~v~~~~~   73 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG-------GTALAQVLDVT-DRHSVAAFAQ   73 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT-------CEEEEEECCTT-CHHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------CcEEEEEcCCC-CHHHHHHHHH
Confidence            568999999999999999999999999999999999999888888887543       57889999996 8999999999


Q ss_pred             HHHHHcCCccEEEeCCccCC
Q 033624           95 KAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~~  114 (115)
                      ++.+.++++|+||||||+..
T Consensus        74 ~~~~~~g~iD~lVnnAG~~~   93 (264)
T 3tfo_A           74 AAVDTWGRIDVLVNNAGVMP   93 (264)
T ss_dssp             HHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHcCCCCEEEECCCCCC
Confidence            99999999999999999863

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.87  E-value=6.1e-21  Score=125.54  Aligned_cols=92  Identities=33%  Similarity=0.526  Sum_probs=82.6

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      +.++.+|+++|||+++|||++++++|+++|++|++++|+.+..++..+.+.          .+...+.+|++ ++++++.
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dv~-d~~~v~~   72 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG----------DNGKGMALNVT-NPESIEA   72 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG----------GGEEEEECCTT-CHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----------ccceEEEEeCC-CHHHHHH
Confidence            456789999999999999999999999999999999999988888777764          34678899996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++++.+.++++|+||||||+..
T Consensus        73 ~~~~~~~~~g~iD~lv~nAg~~~   95 (248)
T 3op4_A           73 VLKAITDEFGGVDILVNNAGITR   95 (248)
T ss_dssp             HHHHHHHHHCCCSEEEECCCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCC
Confidence            99999999999999999999864

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.86  E-value=5.7e-21  Score=127.57  Aligned_cols=96  Identities=33%  Similarity=0.490  Sum_probs=82.9

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc------------cchHHHHHHHhhCCCCCCCCCccceEEE
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR------------VDRLKSLCDEINKPGMVGSPDSVRAVAV   78 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (115)
                      ++.++.+|+++|||+++|||+++|++|+++|++|++++|+            .+.+++....++..+       .++.++
T Consensus         4 ~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~   76 (287)
T 3pxx_A            4 SMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG-------RKAYTA   76 (287)
T ss_dssp             SCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT-------SCEEEE
T ss_pred             cccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC-------CceEEE
Confidence            4567889999999999999999999999999999999987            455555566665433       578899


Q ss_pred             EeecCCCHHHHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           79 ELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        79 ~~di~~~~~~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      .+|++ ++++++.+++++.+.++++|+||||||+..
T Consensus        77 ~~D~~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~  111 (287)
T 3pxx_A           77 EVDVR-DRAAVSRELANAVAEFGKLDVVVANAGICP  111 (287)
T ss_dssp             ECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             EccCC-CHHHHHHHHHHHHHHcCCCCEEEECCCcCc
Confidence            99996 899999999999999999999999999864

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.86  E-value=2.3e-21  Score=127.74  Aligned_cols=86  Identities=31%  Similarity=0.437  Sum_probs=75.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +|+++|||+++|||+++|+.|+++|++|++++|+.+...+..++    .       .++.++++|++ ++++++.+++++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~----~-------~~~~~~~~Dv~-~~~~v~~~v~~~   69 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE----R-------PNLFYFHGDVA-DPLTLKKFVEYA   69 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT----C-------TTEEEEECCTT-SHHHHHHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----c-------CCEEEEEecCC-CHHHHHHHHHHH
Confidence            58999999999999999999999999999999997766544332    2       46788999996 899999999999


Q ss_pred             HHHcCCccEEEeCCccCC
Q 033624           97 WEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        97 ~~~~~~id~li~naG~~~  114 (115)
                      .+++++||+||||||+..
T Consensus        70 ~~~~g~iDiLVNNAG~~~   87 (247)
T 3ged_A           70 MEKLQRIDVLVNNACRGS   87 (247)
T ss_dssp             HHHHSCCCEEEECCCCCC
T ss_pred             HHHcCCCCEEEECCCCCC
Confidence            999999999999999854

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.86  E-value=5.2e-21  Score=127.85  Aligned_cols=94  Identities=30%  Similarity=0.424  Sum_probs=82.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .++.+|+++|||+++|||++++++|+++|++|++++|+.+..++..++++..+       .++.++.+|++ ++++++.+
T Consensus        20 ~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dv~-d~~~v~~~   91 (279)
T 3sju_A           20 HMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG-------HDVDGSSCDVT-STDEVHAA   91 (279)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-------CCEEEEECCTT-CHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEECCCC-CHHHHHHH
Confidence            45679999999999999999999999999999999999998888888887643       57889999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+.++++|+||||||+..
T Consensus        92 ~~~~~~~~g~id~lv~nAg~~~  113 (279)
T 3sju_A           92 VAAAVERFGPIGILVNSAGRNG  113 (279)
T ss_dssp             HHHHHHHHCSCCEEEECCCCCC
T ss_pred             HHHHHHHcCCCcEEEECCCCCC
Confidence            9999999999999999999864

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.86  E-value=2.1e-21  Score=128.93  Aligned_cols=97  Identities=31%  Similarity=0.453  Sum_probs=85.4

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      .+.++.+|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++....      +.++.++.+|++ ++++++
T Consensus        14 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~~Dv~-~~~~v~   86 (266)
T 4egf_A           14 GVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF------GTDVHTVAIDLA-EPDAPA   86 (266)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH------CCCEEEEECCTT-STTHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc------CCcEEEEEecCC-CHHHHH
Confidence            3456889999999999999999999999999999999999988888877775421      246889999996 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccCC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      .+++++.+.++++|+||||||+..
T Consensus        87 ~~~~~~~~~~g~id~lv~nAg~~~  110 (266)
T 4egf_A           87 ELARRAAEAFGGLDVLVNNAGISH  110 (266)
T ss_dssp             HHHHHHHHHHTSCSEEEEECCCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCC
Confidence            999999999999999999999864

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.86  E-value=7.1e-21  Score=126.18  Aligned_cols=93  Identities=34%  Similarity=0.547  Sum_probs=84.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+.+|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++...+       .++.++.+|++ ++++++.+
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~-~~~~v~~~   78 (264)
T 3ucx_A            7 GLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG-------RRALSVGTDIT-DDAQVAHL   78 (264)
T ss_dssp             CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTT-CHHHHHHH
T ss_pred             CCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEEcCCC-CHHHHHHH
Confidence            35789999999999999999999999999999999999998888888887543       57889999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|+||||||+.
T Consensus        79 ~~~~~~~~g~id~lv~nAg~~   99 (264)
T 3ucx_A           79 VDETMKAYGRVDVVINNAFRV   99 (264)
T ss_dssp             HHHHHHHTSCCSEEEECCCSC
T ss_pred             HHHHHHHcCCCcEEEECCCCC
Confidence            999999999999999999875

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.86  E-value=7.3e-21  Score=127.00  Aligned_cols=96  Identities=32%  Similarity=0.526  Sum_probs=81.5

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc------------cchHHHHHHHhhCCCCCCCCCccceEEE
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR------------VDRLKSLCDEINKPGMVGSPDSVRAVAV   78 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (115)
                      ++.++.+|+++|||+++|||+++|++|+++|++|++++|+            .+.+++..+.++..+       .++.++
T Consensus         4 ~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~   76 (281)
T 3s55_A            4 SMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTG-------RRCISA   76 (281)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT-------CCEEEE
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcC-------CeEEEE
Confidence            3456889999999999999999999999999999999997            344555555555433       578899


Q ss_pred             EeecCCCHHHHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           79 ELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        79 ~~di~~~~~~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      .+|++ ++++++.+++++.+.++++|+||||||+..
T Consensus        77 ~~Dv~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~  111 (281)
T 3s55_A           77 KVDVK-DRAALESFVAEAEDTLGGIDIAITNAGIST  111 (281)
T ss_dssp             ECCTT-CHHHHHHHHHHHHHHHTCCCEEEECCCCCC
T ss_pred             eCCCC-CHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence            99996 899999999999999999999999999854

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.86  E-value=1.4e-20  Score=124.64  Aligned_cols=98  Identities=32%  Similarity=0.417  Sum_probs=86.9

Q ss_pred             CCCCCCCCcEEEEecCC-ChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHH
Q 033624           10 EPWHDLNEKVVMVTGAS-SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGAT   88 (115)
Q Consensus        10 ~~~~~~~~~~~lvtG~~-~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~   88 (115)
                      .++..+.+|+++|||++ +|||++++++|+++|++|++++|+.+..++..++++...      ..++.++.+|++ ++++
T Consensus        15 ~~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~~Dl~-~~~~   87 (266)
T 3o38_A           15 DGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG------LGRVEAVVCDVT-STEA   87 (266)
T ss_dssp             CCCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC------SSCEEEEECCTT-CHHH
T ss_pred             ccccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC------CCceEEEEeCCC-CHHH
Confidence            34556889999999997 599999999999999999999999999888888886543      357899999996 8999


Q ss_pred             HHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           89 IEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        89 ~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++.+++++.+.++++|+||||||+..
T Consensus        88 v~~~~~~~~~~~g~id~li~~Ag~~~  113 (266)
T 3o38_A           88 VDALITQTVEKAGRLDVLVNNAGLGG  113 (266)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHHHHhCCCcEEEECCCcCC
Confidence            99999999999999999999999854

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.86  E-value=4.4e-21  Score=128.38  Aligned_cols=93  Identities=42%  Similarity=0.529  Sum_probs=84.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+.+|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++...+       .++.++.+|++ ++++++.+
T Consensus         4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~-~~~~v~~~   75 (280)
T 3tox_A            4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGG-------GEAAALAGDVG-DEALHEAL   75 (280)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTT-------CCEEECCCCTT-CHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------CcEEEEECCCC-CHHHHHHH
Confidence            45789999999999999999999999999999999999999888888886543       57889999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|+||||||+.
T Consensus        76 ~~~~~~~~g~iD~lvnnAg~~   96 (280)
T 3tox_A           76 VELAVRRFGGLDTAFNNAGAL   96 (280)
T ss_dssp             HHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCCC
Confidence            999999999999999999975

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.86  E-value=3.7e-21  Score=128.16  Aligned_cols=94  Identities=37%  Similarity=0.443  Sum_probs=85.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .++.+|+++|||+++|||+++|++|+++|++|++++|+.+..++..++++..+       .++.++.+|++ ++++++.+
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dv~-d~~~v~~~   93 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVG-------HDAEAVAFDVT-SESEIIEA   93 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT-------CCEEECCCCTT-CHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CceEEEEcCCC-CHHHHHHH
Confidence            46789999999999999999999999999999999999998888888887543       46888999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+.++++|+||||||+..
T Consensus        94 ~~~~~~~~g~iD~lv~nAg~~~  115 (271)
T 4ibo_A           94 FARLDEQGIDVDILVNNAGIQF  115 (271)
T ss_dssp             HHHHHHHTCCCCEEEECCCCCC
T ss_pred             HHHHHHHCCCCCEEEECCCCCC
Confidence            9999999999999999999853

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.86  E-value=8.7e-21  Score=124.76  Aligned_cols=93  Identities=30%  Similarity=0.501  Sum_probs=84.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+.+|+++|||+++|||++++++|+++|++|++++|+.+..++..++++..+       .++.++.+|++ ++++++.+
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~   76 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG-------GTAISVAVDVS-DPESAKAM   76 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CEEEEEECCTT-SHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-------CcEEEEEccCC-CHHHHHHH
Confidence            45789999999999999999999999999999999999998888888887543       57889999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|+||||||+.
T Consensus        77 ~~~~~~~~g~id~li~~Ag~~   97 (253)
T 3qiv_A           77 ADRTLAEFGGIDYLVNNAAIF   97 (253)
T ss_dssp             HHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCcC
Confidence            999999999999999999984

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.86  E-value=5.7e-21  Score=128.39  Aligned_cols=95  Identities=29%  Similarity=0.449  Sum_probs=82.3

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCH-HHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADG-ATIE   90 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~-~~~~   90 (115)
                      +..+.+|+++|||+++|||++++++|+++|++|++++|+.+..++..++++..+      ..++.++.+|++ ++ ++++
T Consensus         7 ~~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~~Dl~-~~~~~v~   79 (311)
T 3o26_A            7 NTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN------HENVVFHQLDVT-DPIATMS   79 (311)
T ss_dssp             -----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT------CCSEEEEECCTT-SCHHHHH
T ss_pred             CccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CCceEEEEccCC-CcHHHHH
Confidence            345679999999999999999999999999999999999999888888887653      246889999997 65 9999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .+++.+.+.++++|+||||||+.
T Consensus        80 ~~~~~~~~~~g~iD~lv~nAg~~  102 (311)
T 3o26_A           80 SLADFIKTHFGKLDILVNNAGVA  102 (311)
T ss_dssp             HHHHHHHHHHSSCCEEEECCCCC
T ss_pred             HHHHHHHHhCCCCCEEEECCccc
Confidence            99999999999999999999986

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.86  E-value=9.4e-21  Score=124.97  Aligned_cols=92  Identities=25%  Similarity=0.316  Sum_probs=83.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+|+++|||+++|||++++++|+++|++|++++|+.+.+++..++++..+       .++.++.+|++ ++++++.++
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~-~~~~v~~~~   75 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG-------GRIVARSLDAR-NEDEVTAFL   75 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT-------CEEEEEECCTT-CHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CeEEEEECcCC-CHHHHHHHH
Confidence            4679999999999999999999999999999999999999988888887653       57899999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+. +++|+||||||+..
T Consensus        76 ~~~~~~-g~id~lv~nAg~~~   95 (252)
T 3h7a_A           76 NAADAH-APLEVTIFNVGANV   95 (252)
T ss_dssp             HHHHHH-SCEEEEEECCCCCC
T ss_pred             HHHHhh-CCceEEEECCCcCC
Confidence            999988 99999999999853

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.86  E-value=1.1e-20  Score=127.56  Aligned_cols=95  Identities=25%  Similarity=0.372  Sum_probs=85.6

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      +..+.+++++|||+++|||++++++|+++|++|++++|+.+.+++..++++..+       .++.++.+|++ +.++++.
T Consensus        26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dv~-d~~~v~~   97 (301)
T 3tjr_A           26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG-------FDAHGVVCDVR-HLDEMVR   97 (301)
T ss_dssp             CCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTT-CHHHHHH
T ss_pred             HhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------CceEEEEccCC-CHHHHHH
Confidence            345789999999999999999999999999999999999999888888887543       57889999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++++.+.++++|+||||||+..
T Consensus        98 ~~~~~~~~~g~id~lvnnAg~~~  120 (301)
T 3tjr_A           98 LADEAFRLLGGVDVVFSNAGIVV  120 (301)
T ss_dssp             HHHHHHHHHSSCSEEEECCCCCC
T ss_pred             HHHHHHHhCCCCCEEEECCCcCC
Confidence            99999999999999999999853

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.86  E-value=1.4e-20  Score=125.66  Aligned_cols=95  Identities=33%  Similarity=0.497  Sum_probs=83.4

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEec-------------ccchHHHHHHHhhCCCCCCCCCccceEEE
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-------------RVDRLKSLCDEINKPGMVGSPDSVRAVAV   78 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (115)
                      +..+.+|+++|||+++|||++++++|+++|++|++++|             +.+.+++..+.++..+       .++.++
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~   82 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG-------RKALTR   82 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT-------CCEEEE
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC-------CeEEEE
Confidence            45678999999999999999999999999999999998             5666777777776543       578899


Q ss_pred             EeecCCCHHHHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           79 ELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        79 ~~di~~~~~~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      .+|++ ++++++.+++++.+.++++|+||||||+..
T Consensus        83 ~~Dv~-~~~~v~~~~~~~~~~~g~id~lvnnAg~~~  117 (280)
T 3pgx_A           83 VLDVR-DDAALRELVADGMEQFGRLDVVVANAGVLS  117 (280)
T ss_dssp             ECCTT-CHHHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred             EcCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            99996 899999999999999999999999999864

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.86  E-value=1.5e-20  Score=125.78  Aligned_cols=94  Identities=34%  Similarity=0.494  Sum_probs=82.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc----------------cchHHHHHHHhhCCCCCCCCCccceE
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR----------------VDRLKSLCDEINKPGMVGSPDSVRAV   76 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (115)
                      ..+.+|+++|||+++|||++++++|+++|++|++++|+                .+.+++..+.++..+       .++.
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~   79 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN-------RRIV   79 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT-------CCEE
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC-------CceE
Confidence            45789999999999999999999999999999999887                555666666666543       5788


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           77 AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        77 ~~~~di~~~~~~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++.+|++ ++++++.+++++.+.++++|+||||||+..
T Consensus        80 ~~~~Dv~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~  116 (286)
T 3uve_A           80 TAEVDVR-DYDALKAAVDSGVEQLGRLDIIVANAGIGN  116 (286)
T ss_dssp             EEECCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             EEEcCCC-CHHHHHHHHHHHHHHhCCCCEEEECCcccC
Confidence            9999996 899999999999999999999999999853

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.86  E-value=1.2e-20  Score=127.06  Aligned_cols=94  Identities=29%  Similarity=0.473  Sum_probs=82.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc------------cchHHHHHHHhhCCCCCCCCCccceEEEEe
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR------------VDRLKSLCDEINKPGMVGSPDSVRAVAVEL   80 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (115)
                      ..+.+|+++|||+++|||+++|++|+++|++|++++|+            .+.+++..++++..+       .++.++.+
T Consensus        24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~   96 (299)
T 3t7c_A           24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG-------RRIIASQV   96 (299)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT-------CCEEEEEC
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcC-------CceEEEEC
Confidence            45789999999999999999999999999999999987            555666666666543       57889999


Q ss_pred             ecCCCHHHHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           81 DVCADGATIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        81 di~~~~~~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      |++ ++++++.+++++.+.++++|+||||||+..
T Consensus        97 Dv~-~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~  129 (299)
T 3t7c_A           97 DVR-DFDAMQAAVDDGVTQLGRLDIVLANAALAS  129 (299)
T ss_dssp             CTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             CCC-CHHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence            996 899999999999999999999999999753

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.85  E-value=7.2e-21  Score=126.70  Aligned_cols=94  Identities=31%  Similarity=0.565  Sum_probs=84.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+.+|+++|||+++|||+++|++|+++|++|++++|+.+..++..+.++..+       .++..+.+|++ ++++++.+
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~-d~~~v~~~   95 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAG-------LEGRGAVLNVN-DATAVDAL   95 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHT-------CCCEEEECCTT-CHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEEEeCC-CHHHHHHH
Confidence            35779999999999999999999999999999999999988888877776543       46788999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+.++++|+||||||+..
T Consensus        96 ~~~~~~~~g~iD~lvnnAg~~~  117 (270)
T 3ftp_A           96 VESTLKEFGALNVLVNNAGITQ  117 (270)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCCCC
Confidence            9999999999999999999854

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.85  E-value=7.5e-21  Score=129.28  Aligned_cols=96  Identities=39%  Similarity=0.494  Sum_probs=84.7

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc----------cchHHHHHHHhhCCCCCCCCCccceEEEEe
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR----------VDRLKSLCDEINKPGMVGSPDSVRAVAVEL   80 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (115)
                      ++..+.+|+++|||+++|||+++|++|+++|++|++++|+          .+..++..+++...+       .++.++.+
T Consensus        21 ~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~   93 (322)
T 3qlj_A           21 SMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAG-------GEAVADGS   93 (322)
T ss_dssp             -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTT-------CEEEEECC
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcC-------CcEEEEEC
Confidence            4566889999999999999999999999999999999987          667777777776543       57889999


Q ss_pred             ecCCCHHHHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           81 DVCADGATIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        81 di~~~~~~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      |++ ++++++.+++++.+.++++|+||||||+..
T Consensus        94 Dv~-d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~  126 (322)
T 3qlj_A           94 NVA-DWDQAAGLIQTAVETFGGLDVLVNNAGIVR  126 (322)
T ss_dssp             CTT-SHHHHHHHHHHHHHHHSCCCEEECCCCCCC
T ss_pred             CCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            996 899999999999999999999999999864

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.85  E-value=1.1e-20  Score=125.17  Aligned_cols=94  Identities=35%  Similarity=0.508  Sum_probs=84.5

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      ++..+.+++++|||+++|||++++++|+++|++|++++|+.+.+++..+.+...+       .++.++.+|++ ++++++
T Consensus        23 ~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~v~   94 (262)
T 3rkr_A           23 HMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG-------GEAESHACDLS-HSDAIA   94 (262)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CEEEEEECCTT-CHHHHH
T ss_pred             hhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC-------CceeEEEecCC-CHHHHH
Confidence            4556789999999999999999999999999999999999998888888887543       57889999996 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCcc
Q 033624           91 ISVQKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~  112 (115)
                      .+++++.+.++++|+||||||+
T Consensus        95 ~~~~~~~~~~g~id~lv~~Ag~  116 (262)
T 3rkr_A           95 AFATGVLAAHGRCDVLVNNAGV  116 (262)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCc
Confidence            9999999999999999999998

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.85  E-value=9.7e-21  Score=126.36  Aligned_cols=94  Identities=28%  Similarity=0.474  Sum_probs=83.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+.+|+++|||+++|||++++++|+++|++|++++|+.+..++..+++....      +.++.++.+|++ ++++++.+
T Consensus        23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~-~~~~v~~~   95 (277)
T 4fc7_A           23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT------GRRCLPLSMDVR-APPAVMAA   95 (277)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH------SSCEEEEECCTT-CHHHHHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc------CCcEEEEEcCCC-CHHHHHHH
Confidence            45789999999999999999999999999999999999888877777765321      246889999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|+||||||+.
T Consensus        96 ~~~~~~~~g~id~lv~nAg~~  116 (277)
T 4fc7_A           96 VDQALKEFGRIDILINCAAGN  116 (277)
T ss_dssp             HHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHcCCCCEEEECCcCC
Confidence            999999999999999999975

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.85  E-value=1.1e-20  Score=125.39  Aligned_cols=98  Identities=32%  Similarity=0.522  Sum_probs=82.5

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      +...+.+|+++|||+++|||++++++|+++|++|++++|+.+..++..+++....     .+.++.++.+|++ ++++++
T Consensus         7 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~-~~~~v~   80 (267)
T 1iy8_A            7 PTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA-----PDAEVLTTVADVS-DEAQVE   80 (267)
T ss_dssp             ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHC-----TTCCEEEEECCTT-SHHHHH
T ss_pred             CCccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-----CCceEEEEEccCC-CHHHHH
Confidence            3345789999999999999999999999999999999999888777776665321     1246888999996 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccCC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      .+++++.+.++++|+||||||+..
T Consensus        81 ~~~~~~~~~~g~id~lv~nAg~~~  104 (267)
T 1iy8_A           81 AYVTATTERFGRIDGFFNNAGIEG  104 (267)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCC
Confidence            999999999999999999999753

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.85  E-value=1.9e-20  Score=125.05  Aligned_cols=95  Identities=22%  Similarity=0.356  Sum_probs=84.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .++.+|+++|||+++|||++++++|+++|++|++++|+.+..++..++++..+    ....++.++.+|++ ++++++.+
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~~Dv~-~~~~v~~~   81 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALG----ANGGAIRYEPTDIT-NEDETARA   81 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC----CSSCEEEEEECCTT-SHHHHHHH
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC----CCCceEEEEeCCCC-CHHHHHHH
Confidence            45789999999999999999999999999999999999999888888887653    11237889999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCcc
Q 033624           93 VQKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~  112 (115)
                      ++++.+.++++|+||||||+
T Consensus        82 ~~~~~~~~g~id~lv~nAg~  101 (281)
T 3svt_A           82 VDAVTAWHGRLHGVVHCAGG  101 (281)
T ss_dssp             HHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHcCCCCEEEECCCc
Confidence            99999999999999999997

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.85  E-value=1.2e-20  Score=125.74  Aligned_cols=95  Identities=33%  Similarity=0.472  Sum_probs=81.5

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc------------cchHHHHHHHhhCCCCCCCCCccceEEEE
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR------------VDRLKSLCDEINKPGMVGSPDSVRAVAVE   79 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (115)
                      ...+.+|+++|||+++|||++++++|+++|++|++++|+            .+.+++..+.+...+       .++.++.
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~   80 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG-------SRIVARQ   80 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT-------CCEEEEE
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC-------CeEEEEe
Confidence            356789999999999999999999999999999999987            455555555555432       5788999


Q ss_pred             eecCCCHHHHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           80 LDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        80 ~di~~~~~~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +|++ ++++++.+++++.+.++++|+||||||+..
T Consensus        81 ~D~~-~~~~v~~~~~~~~~~~g~id~lv~nAg~~~  114 (278)
T 3sx2_A           81 ADVR-DRESLSAALQAGLDELGRLDIVVANAGIAP  114 (278)
T ss_dssp             CCTT-CHHHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred             CCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            9996 899999999999999999999999999864

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.85  E-value=1.3e-20  Score=124.95  Aligned_cols=96  Identities=24%  Similarity=0.371  Sum_probs=83.0

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc---cchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR---VDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGA   87 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~   87 (115)
                      .+.++.+|+++|||+++|||+++|++|+++|++|++++|.   .+.+++..++++..+       .++.++.+|++ +++
T Consensus         5 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~-d~~   76 (262)
T 3ksu_A            5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQG-------AKVALYQSDLS-NEE   76 (262)
T ss_dssp             CCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTT-------CEEEEEECCCC-SHH
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcC-------CcEEEEECCCC-CHH
Confidence            3456889999999999999999999999999999998764   445666777776543       57889999996 899


Q ss_pred             HHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           88 TIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        88 ~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+++++.+.++++|+||||||+..
T Consensus        77 ~v~~~~~~~~~~~g~iD~lvnnAg~~~  103 (262)
T 3ksu_A           77 EVAKLFDFAEKEFGKVDIAINTVGKVL  103 (262)
T ss_dssp             HHHHHHHHHHHHHCSEEEEEECCCCCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            999999999999999999999999864

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.85  E-value=1.5e-20  Score=124.93  Aligned_cols=93  Identities=25%  Similarity=0.382  Sum_probs=82.7

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      ++.++.+|+++|||+++|||+++|++|+++|++|++++|+.+.+++..+.+.          .++.++.+|++ ++++++
T Consensus        21 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dv~-d~~~v~   89 (266)
T 3grp_A           21 SMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLG----------KDVFVFSANLS-DRKSIK   89 (266)
T ss_dssp             CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----------SSEEEEECCTT-SHHHHH
T ss_pred             chhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----------CceEEEEeecC-CHHHHH
Confidence            4567889999999999999999999999999999999999888877766552          46889999996 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccCC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      .+++++.+.++++|+||||||+..
T Consensus        90 ~~~~~~~~~~g~iD~lvnnAg~~~  113 (266)
T 3grp_A           90 QLAEVAEREMEGIDILVNNAGITR  113 (266)
T ss_dssp             HHHHHHHHHHTSCCEEEECCCCC-
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCC
Confidence            999999999999999999999853

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.85  E-value=2e-20  Score=128.59  Aligned_cols=96  Identities=36%  Similarity=0.502  Sum_probs=83.8

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch-------HHHHHHHhhCCCCCCCCCccceEEEEeecC
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-------LKSLCDEINKPGMVGSPDSVRAVAVELDVC   83 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~di~   83 (115)
                      ....+.+|+++|||+++|||++++++|+++|++|++++|+.+.       +++..++++..+       .++.++.+|++
T Consensus        39 ~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g-------~~~~~~~~Dv~  111 (346)
T 3kvo_A           39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVG-------GKALPCIVDVR  111 (346)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTT-------CEEEEEECCTT
T ss_pred             cCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcC-------CeEEEEEccCC
Confidence            4456789999999999999999999999999999999998764       556666666543       57889999996


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           84 ADGATIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                       ++++++.+++++.+.++++|+||||||+..
T Consensus       112 -d~~~v~~~~~~~~~~~g~iDilVnnAG~~~  141 (346)
T 3kvo_A          112 -DEQQISAAVEKAIKKFGGIDILVNNASAIS  141 (346)
T ss_dssp             -CHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             -CHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence             899999999999999999999999999853

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.85  E-value=2.8e-20  Score=122.99  Aligned_cols=93  Identities=26%  Similarity=0.393  Sum_probs=82.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      +++.+|+++|||+++|||++++++|+++|++|++++|+.+..++..++++..+       .++.++.+|++ ++++++.+
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~   76 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG-------FKVEASVCDLS-SRSERQEL   76 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CEEEEEECCTT-CHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEEcCCC-CHHHHHHH
Confidence            35779999999999999999999999999999999999888877777776432       46888999996 89999999


Q ss_pred             HHHHHHHc-CCccEEEeCCccC
Q 033624           93 VQKAWEAF-GRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~-~~id~li~naG~~  113 (115)
                      ++++.+.+ +++|+||||||+.
T Consensus        77 ~~~~~~~~~g~id~lv~~Ag~~   98 (260)
T 2ae2_A           77 MNTVANHFHGKLNILVNNAGIV   98 (260)
T ss_dssp             HHHHHHHTTTCCCEEEECCCCC
T ss_pred             HHHHHHHcCCCCCEEEECCCCC
Confidence            99999999 8999999999975

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.85  E-value=2e-20  Score=122.64  Aligned_cols=93  Identities=33%  Similarity=0.442  Sum_probs=84.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+|+++|||+++|||++++++|+++|++|++++|+.+..++..+.++..+       .++.++.+|++ ++++++.++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~~   73 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG-------FKARGLVLNIS-DIESIQNFF   73 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT-------CCEEEEECCTT-CHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CceEEEEecCC-CHHHHHHHH
Confidence            3678999999999999999999999999999999999988888888887543       57889999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+.++++|+||||||+..
T Consensus        74 ~~~~~~~~~id~li~~Ag~~~   94 (247)
T 3lyl_A           74 AEIKAENLAIDILVNNAGITR   94 (247)
T ss_dssp             HHHHHTTCCCSEEEECCCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCCC
Confidence            999999999999999999863

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.85  E-value=2.4e-20  Score=123.70  Aligned_cols=96  Identities=31%  Similarity=0.357  Sum_probs=84.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .++.+|+++|||+++|||++++++|+++|++|++++|+.+..++..+++....     ...++.++.+|++ ++++++.+
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~~Dv~-~~~~v~~~   77 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRF-----PGARLFASVCDVL-DALQVRAF   77 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS-----TTCCEEEEECCTT-CHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-----CCceEEEEeCCCC-CHHHHHHH
Confidence            35789999999999999999999999999999999999988888888776421     1235889999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+.++++|+||||||+..
T Consensus        78 ~~~~~~~~g~id~lvnnAg~~~   99 (265)
T 3lf2_A           78 AEACERTLGCASILVNNAGQGR   99 (265)
T ss_dssp             HHHHHHHHCSCSEEEECCCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCCCC
Confidence            9999999999999999999853

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.85  E-value=1.7e-20  Score=124.79  Aligned_cols=94  Identities=35%  Similarity=0.553  Sum_probs=82.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEec-ccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ..+.+|+++|||+++|||+++|++|+++|++|++++| +.+..+...+.++..+       .++.++.+|++ ++++++.
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-d~~~v~~   95 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAG-------GEAFAVKADVS-QESEVEA   95 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------CCEEEEECCTT-SHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC-------CcEEEEECCCC-CHHHHHH
Confidence            3567999999999999999999999999999999888 5566677777776543       56889999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++++.+.++++|+||||||+..
T Consensus        96 ~~~~~~~~~g~id~lv~nAg~~~  118 (269)
T 4dmm_A           96 LFAAVIERWGRLDVLVNNAGITR  118 (269)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCC
Confidence            99999999999999999999864

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.85  E-value=2.3e-20  Score=124.41  Aligned_cols=94  Identities=30%  Similarity=0.444  Sum_probs=81.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEec-------------ccchHHHHHHHhhCCCCCCCCCccceEEEE
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-------------RVDRLKSLCDEINKPGMVGSPDSVRAVAVE   79 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (115)
                      .++.+|+++|||+++|||++++++|+++|++|++++|             +.+.+++..+.+...+       .++.++.
T Consensus         7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~   79 (277)
T 3tsc_A            7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN-------RRIVAAV   79 (277)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT-------CCEEEEE
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC-------CeEEEEE
Confidence            3578999999999999999999999999999999988             4555666666665433       5788999


Q ss_pred             eecCCCHHHHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           80 LDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        80 ~di~~~~~~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +|++ ++++++.+++++.+.++++|+||||||+..
T Consensus        80 ~D~~-~~~~v~~~~~~~~~~~g~id~lvnnAg~~~  113 (277)
T 3tsc_A           80 VDTR-DFDRLRKVVDDGVAALGRLDIIVANAGVAA  113 (277)
T ss_dssp             CCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             CCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            9996 899999999999999999999999999864

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.85  E-value=1.8e-20  Score=123.52  Aligned_cols=94  Identities=28%  Similarity=0.518  Sum_probs=83.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeec--CCCHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDV--CADGATIE   90 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di--~~~~~~~~   90 (115)
                      ..+.+|+++|||+++|||++++++|+++|++|++++|+.+.+++..+.+...+      ..++.++.+|+  + ++++++
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~-~~~~~~   80 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET------GRQPQWFILDLLTC-TSENCQ   80 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH------SCCCEEEECCTTTC-CHHHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc------CCCceEEEEecccC-CHHHHH
Confidence            45789999999999999999999999999999999999988888777776432      12577889999  7 789999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .+++++.+.++++|+||||||+.
T Consensus        81 ~~~~~~~~~~g~id~lv~nAg~~  103 (252)
T 3f1l_A           81 QLAQRIAVNYPRLDGVLHNAGLL  103 (252)
T ss_dssp             HHHHHHHHHCSCCSEEEECCCCC
T ss_pred             HHHHHHHHhCCCCCEEEECCccC
Confidence            99999999999999999999985

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.85  E-value=2.5e-20  Score=122.52  Aligned_cols=92  Identities=43%  Similarity=0.669  Sum_probs=82.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+++++|||+++|||++++++|+++|++|++++|+.+.+++..++++..+       .++.++.+|++ ++++++.++
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dv~-~~~~~~~~~   75 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG-------AKVHVLELDVA-DRQGVDAAV   75 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTT-CHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------CcEEEEECCCC-CHHHHHHHH
Confidence            3678999999999999999999999999999999999888888777776432       46888999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|+||||||+.
T Consensus        76 ~~~~~~~g~id~lv~nAg~~   95 (247)
T 2jah_A           76 ASTVEALGGLDILVNNAGIM   95 (247)
T ss_dssp             HHHHHHHSCCSEEEECCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCC
Confidence            99999999999999999975

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.85  E-value=1.6e-20  Score=125.80  Aligned_cols=93  Identities=28%  Similarity=0.478  Sum_probs=81.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc-------hHHHHHHHhhCCCCCCCCCccceEEEEeecCCCH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-------RLKSLCDEINKPGMVGSPDSVRAVAVELDVCADG   86 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~   86 (115)
                      .+.+|+++|||+++|||++++++|+++|++|++++|+.+       .+++..++++..+       .++.++.+|++ ++
T Consensus         6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~-~~   77 (285)
T 3sc4_A            6 SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAG-------GQALPIVGDIR-DG   77 (285)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHT-------SEEEEEECCTT-SH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcC-------CcEEEEECCCC-CH
Confidence            478999999999999999999999999999999999876       4566666665433       57889999996 89


Q ss_pred             HHHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           87 ATIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        87 ~~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+++++.+.++++|+||||||+..
T Consensus        78 ~~v~~~~~~~~~~~g~id~lvnnAg~~~  105 (285)
T 3sc4_A           78 DAVAAAVAKTVEQFGGIDICVNNASAIN  105 (285)
T ss_dssp             HHHHHHHHHHHHHHSCCSEEEECCCCCC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            9999999999999999999999999864

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.85  E-value=1.7e-20  Score=124.95  Aligned_cols=95  Identities=35%  Similarity=0.492  Sum_probs=82.2

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc-cchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      ...+.+|+++|||+++|||++++++|+++|++|++++++ .+..+...++++..+       .++.++.+|++ ++++++
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~Dv~-d~~~v~   97 (271)
T 3v2g_A           26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG-------GRAVAIRADNR-DAEAIE   97 (271)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------CCEEEEECCTT-CHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-------CcEEEEECCCC-CHHHHH
Confidence            346789999999999999999999999999999998665 455667777776543       57889999996 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccCC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      .+++++.+.++++|+||||||+..
T Consensus        98 ~~~~~~~~~~g~iD~lvnnAg~~~  121 (271)
T 3v2g_A           98 QAIRETVEALGGLDILVNSAGIWH  121 (271)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHHcCCCcEEEECCCCCC
Confidence            999999999999999999999853

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.85  E-value=2e-20  Score=123.30  Aligned_cols=96  Identities=28%  Similarity=0.471  Sum_probs=83.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+++++|||+++|||++++++|+++|++|++++|+.+.+++..+++....    ....++.++.+|++ ++++++.++
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~Dv~-~~~~v~~~~   78 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSN----KHVQEPIVLPLDIT-DCTKADTEI   78 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHC----TTSCCCEEEECCTT-CHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhc----cccCcceEEeccCC-CHHHHHHHH
Confidence            4679999999999999999999999999999999999998888887776432    01246789999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+.++++|+||||||+..
T Consensus        79 ~~~~~~~g~iD~lvnnAg~~~   99 (250)
T 3nyw_A           79 KDIHQKYGAVDILVNAAAMFM   99 (250)
T ss_dssp             HHHHHHHCCEEEEEECCCCCC
T ss_pred             HHHHHhcCCCCEEEECCCcCC
Confidence            999999999999999999853

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.85  E-value=8.9e-21  Score=125.91  Aligned_cols=86  Identities=20%  Similarity=0.256  Sum_probs=74.5

Q ss_pred             CCCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHH
Q 033624           10 EPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATI   89 (115)
Q Consensus        10 ~~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~   89 (115)
                      ..+.+|+||+++|||+++|||+++|+.|+++|++|++++|+.++.                 ..+..++++|++ +++++
T Consensus         4 ~dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------------~~~~~~~~~Dv~-~~~~v   65 (261)
T 4h15_A            4 IEFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG-----------------LPEELFVEADLT-TKEGC   65 (261)
T ss_dssp             CCCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------------SCTTTEEECCTT-SHHHH
T ss_pred             hhccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC-----------------CCcEEEEEcCCC-CHHHH
Confidence            345678999999999999999999999999999999999975421                 023347889996 89999


Q ss_pred             HHHHHHHHHHcCCccEEEeCCccC
Q 033624           90 EISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        90 ~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      +.+++++.+++++||+||||||+.
T Consensus        66 ~~~~~~~~~~~G~iDilVnnAG~~   89 (261)
T 4h15_A           66 AIVAEATRQRLGGVDVIVHMLGGS   89 (261)
T ss_dssp             HHHHHHHHHHTSSCSEEEECCCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCC
Confidence            999999999999999999999974

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.85  E-value=4.1e-20  Score=123.31  Aligned_cols=94  Identities=37%  Similarity=0.499  Sum_probs=83.4

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      |.++.+++++|||+++|||++++++|+++|++|++++|+.+..++..++++..+       .++.++.+|++ ++++++.
T Consensus        17 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dv~-~~~~v~~   88 (277)
T 2rhc_B           17 MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG-------VEADGRTCDVR-SVPEIEA   88 (277)
T ss_dssp             TCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTT-CHHHHHH
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CceEEEECCCC-CHHHHHH
Confidence            335789999999999999999999999999999999999888877777776433       46788999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++++.+.++++|+||||||+.
T Consensus        89 ~~~~~~~~~g~iD~lv~~Ag~~  110 (277)
T 2rhc_B           89 LVAAVVERYGPVDVLVNNAGRP  110 (277)
T ss_dssp             HHHHHHHHTCSCSEEEECCCCC
T ss_pred             HHHHHHHHhCCCCEEEECCCCC
Confidence            9999999999999999999975

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.85  E-value=2.1e-20  Score=122.96  Aligned_cols=91  Identities=27%  Similarity=0.423  Sum_probs=82.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .++.+|+++|||+++|||++++++|+++|++|++++|+.+..++..+.+.          .++.++.+|++ ++++++.+
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dv~-~~~~v~~~   70 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG----------KKARAIAADIS-DPGSVKAL   70 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC----------TTEEECCCCTT-CHHHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----------CceEEEEcCCC-CHHHHHHH
Confidence            35789999999999999999999999999999999999988887777662          46788999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+.++++|+||||||+..
T Consensus        71 ~~~~~~~~g~id~lv~nAg~~~   92 (247)
T 3rwb_A           71 FAEIQALTGGIDILVNNASIVP   92 (247)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCC
T ss_pred             HHHHHHHCCCCCEEEECCCCCC
Confidence            9999999999999999999863

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.85  E-value=2e-20  Score=124.74  Aligned_cols=91  Identities=40%  Similarity=0.570  Sum_probs=79.4

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      +..+.+|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++.          .++.++.+|++ ++++++.
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dv~-d~~~v~~   91 (272)
T 4dyv_A           23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG----------DDALCVPTDVT-DPDSVRA   91 (272)
T ss_dssp             -----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT----------SCCEEEECCTT-SHHHHHH
T ss_pred             hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC----------CCeEEEEecCC-CHHHHHH
Confidence            445679999999999999999999999999999999999988888777763          35788999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++++.+.++++|+||||||+.
T Consensus        92 ~~~~~~~~~g~iD~lVnnAg~~  113 (272)
T 4dyv_A           92 LFTATVEKFGRVDVLFNNAGTG  113 (272)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCCC
Confidence            9999999999999999999985

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.85  E-value=2.4e-20  Score=123.92  Aligned_cols=96  Identities=34%  Similarity=0.564  Sum_probs=82.3

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHh-hCCCCCCCCCccceEEEEeecCCCHHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI-NKPGMVGSPDSVRAVAVELDVCADGATI   89 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~di~~~~~~~   89 (115)
                      +...+.+|+++|||+++|||++++++|+++|++|++++|+.+..++..+++ +..+       .++.++.+|++ +++++
T Consensus        15 ~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-------~~~~~~~~Dl~-~~~~v   86 (267)
T 1vl8_A           15 EVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG-------VETMAFRCDVS-NYEEV   86 (267)
T ss_dssp             --CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-------CCEEEEECCTT-CHHHH
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-------CeEEEEEcCCC-CHHHH
Confidence            446778999999999999999999999999999999999988877776666 2212       46788999996 89999


Q ss_pred             HHHHHHHHHHcCCccEEEeCCccCC
Q 033624           90 EISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        90 ~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +.+++++.+.++++|+||||||+..
T Consensus        87 ~~~~~~~~~~~g~iD~lvnnAg~~~  111 (267)
T 1vl8_A           87 KKLLEAVKEKFGKLDTVVNAAGINR  111 (267)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCC
Confidence            9999999999999999999999753

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.84  E-value=3.5e-20  Score=123.94  Aligned_cols=96  Identities=29%  Similarity=0.424  Sum_probs=82.7

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEec-ccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      +.++++|+++|||+++|||+++|++|+++|++|++++| +.+..+...+++....      ..++.++.+|++ ++++++
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~-d~~~v~   92 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS------SGTVLHHPADMT-KPSEIA   92 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTC------SSCEEEECCCTT-CHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhcc------CCcEEEEeCCCC-CHHHHH
Confidence            35678999999999999999999999999999999999 5566777777776542      257889999996 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccCC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      .+++++.+.++++|+||||||+..
T Consensus        93 ~~~~~~~~~~g~iD~lv~nAg~~~  116 (281)
T 3v2h_A           93 DMMAMVADRFGGADILVNNAGVQF  116 (281)
T ss_dssp             HHHHHHHHHTSSCSEEEECCCCCC
T ss_pred             HHHHHHHHHCCCCCEEEECCCCCC
Confidence            999999999999999999999853

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.84  E-value=3.3e-20  Score=122.72  Aligned_cols=93  Identities=26%  Similarity=0.471  Sum_probs=81.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEE-ecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .++.+|+++|||+++|||++++++|+++|++|+++ .++.+..+...++++..+       .++.++.+|++ ++++++.
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~-~~~~v~~   75 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG-------RSALAIKADLT-NAAEVEA   75 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTT-------SCCEEEECCTT-CHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-------CceEEEEcCCC-CHHHHHH
Confidence            45789999999999999999999999999999988 556666777777776543       56889999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++++.+.++++|+||||||+.
T Consensus        76 ~~~~~~~~~g~id~lv~nAg~~   97 (259)
T 3edm_A           76 AISAAADKFGEIHGLVHVAGGL   97 (259)
T ss_dssp             HHHHHHHHHCSEEEEEECCCCC
T ss_pred             HHHHHHHHhCCCCEEEECCCcc
Confidence            9999999999999999999975

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.84  E-value=3.6e-20  Score=123.67  Aligned_cols=95  Identities=29%  Similarity=0.484  Sum_probs=82.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++...+    ....++.++.+|++ ++++++.++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~Dv~-~~~~v~~~~   77 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSG----VSEKQVNSVVADVT-TEDGQDQII   77 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT----CCGGGEEEEECCTT-SHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcC----CCCcceEEEEecCC-CHHHHHHHH
Confidence            4679999999999999999999999999999999999988888777776532    00126889999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|+||||||+.
T Consensus        78 ~~~~~~~g~iD~lv~nAg~~   97 (280)
T 1xkq_A           78 NSTLKQFGKIDVLVNNAGAA   97 (280)
T ss_dssp             HHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHhcCCCCEEEECCCCC
Confidence            99999999999999999975

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.84  E-value=7.3e-20  Score=122.95  Aligned_cols=93  Identities=29%  Similarity=0.418  Sum_probs=80.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch-HHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-LKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .++.+|+++|||+++|||++++++|+++|++|++++|+.+. .+...+.++..+       .++.++.+|++ ++++++.
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~-d~~~v~~  114 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG-------VKCVLLPGDLS-DEQHCKD  114 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT-------CCEEEEESCTT-SHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC-------CcEEEEECCCC-CHHHHHH
Confidence            45689999999999999999999999999999999998764 344445555433       57889999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++++.++++++|+||||||+.
T Consensus       115 ~~~~~~~~~g~iD~lvnnAg~~  136 (291)
T 3ijr_A          115 IVQETVRQLGSLNILVNNVAQQ  136 (291)
T ss_dssp             HHHHHHHHHSSCCEEEECCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCCc
Confidence            9999999999999999999975

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.84  E-value=4.2e-20  Score=122.11  Aligned_cols=91  Identities=30%  Similarity=0.488  Sum_probs=81.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+.+|+++|||+++|||++++++|+++|++|++++|+.+..++..+++.          .++.++.+|++ ++++++.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~-~~~~v~~~   72 (259)
T 4e6p_A            4 KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG----------PAAYAVQMDVT-RQDSIDAA   72 (259)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----------TTEEEEECCTT-CHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----------CCceEEEeeCC-CHHHHHHH
Confidence            45779999999999999999999999999999999999988888777763          35788999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.++++++|+||||||+..
T Consensus        73 ~~~~~~~~g~id~lv~~Ag~~~   94 (259)
T 4e6p_A           73 IAATVEHAGGLDILVNNAALFD   94 (259)
T ss_dssp             HHHHHHHSSSCCEEEECCCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCcCC
Confidence            9999999999999999999853

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.84  E-value=3.7e-20  Score=122.31  Aligned_cols=91  Identities=23%  Similarity=0.367  Sum_probs=82.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+.+|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++.          .++.++.+|++ ++++++.+
T Consensus         4 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dv~-~~~~v~~~   72 (255)
T 4eso_A            4 GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG----------PRVHALRSDIA-DLNEIAVL   72 (255)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----------GGEEEEECCTT-CHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----------CcceEEEccCC-CHHHHHHH
Confidence            45789999999999999999999999999999999999988887777662          46889999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+.++++|+||||||+..
T Consensus        73 ~~~~~~~~g~id~lv~nAg~~~   94 (255)
T 4eso_A           73 GAAAGQTLGAIDLLHINAGVSE   94 (255)
T ss_dssp             HHHHHHHHSSEEEEEECCCCCC
T ss_pred             HHHHHHHhCCCCEEEECCCCCC
Confidence            9999999999999999999863

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.84  E-value=4.1e-20  Score=123.45  Aligned_cols=92  Identities=39%  Similarity=0.533  Sum_probs=82.1

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ..++.+|+++|||+++|||++++++|+++|++|++++|+.+..++..+++.          .++.++.+|++ ++++++.
T Consensus        22 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dv~-d~~~v~~   90 (277)
T 4dqx_A           22 SMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIG----------SKAFGVRVDVS-SAKDAES   90 (277)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC----------TTEEEEECCTT-CHHHHHH
T ss_pred             cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----------CceEEEEecCC-CHHHHHH
Confidence            346789999999999999999999999999999999999888877776652          46788999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++++.+.++++|+||||||+..
T Consensus        91 ~~~~~~~~~g~iD~lv~nAg~~~  113 (277)
T 4dqx_A           91 MVEKTTAKWGRVDVLVNNAGFGT  113 (277)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCcCC
Confidence            99999999999999999999753

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.84  E-value=3e-20  Score=123.80  Aligned_cols=93  Identities=29%  Similarity=0.472  Sum_probs=80.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch-------HHHHHHHhhCCCCCCCCCccceEEEEeecCCCH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-------LKSLCDEINKPGMVGSPDSVRAVAVELDVCADG   86 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~   86 (115)
                      ++.+|+++|||+++|||+++|++|+++|++|++++|+.+.       +++..+.++..+       .++.++.+|++ ++
T Consensus         3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~-~~   74 (274)
T 3e03_A            3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAG-------GQGLALKCDIR-EE   74 (274)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHT-------SEEEEEECCTT-CH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcC-------CeEEEEeCCCC-CH
Confidence            5789999999999999999999999999999999998753       555555555432       57889999996 89


Q ss_pred             HHHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           87 ATIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        87 ~~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+++++.+.++++|+||||||+..
T Consensus        75 ~~v~~~~~~~~~~~g~iD~lvnnAG~~~  102 (274)
T 3e03_A           75 DQVRAAVAATVDTFGGIDILVNNASAIW  102 (274)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCccc
Confidence            9999999999999999999999999853

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.84  E-value=3.4e-20  Score=122.66  Aligned_cols=91  Identities=36%  Similarity=0.504  Sum_probs=81.7

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEE-ecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .++|+++|||+++|||++++++|+++|++|+++ +|+.+..++..++++..+       .++.++.+|++ ++++++.++
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~-~~~~v~~~~   73 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLG-------VKVLVVKANVG-QPAKIKEMF   73 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT-------CCEEEEECCTT-CHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-------CcEEEEEcCCC-CHHHHHHHH
Confidence            358999999999999999999999999999986 888888888888887643       57889999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|+||||||+.
T Consensus        74 ~~~~~~~g~id~lv~nAg~~   93 (258)
T 3oid_A           74 QQIDETFGRLDVFVNNAASG   93 (258)
T ss_dssp             HHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCC
Confidence            99999999999999999974

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.84  E-value=3.2e-20  Score=126.05  Aligned_cols=95  Identities=36%  Similarity=0.529  Sum_probs=81.3

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc------------cchHHHHHHHhhCCCCCCCCCccceEEEE
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR------------VDRLKSLCDEINKPGMVGSPDSVRAVAVE   79 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (115)
                      +..+.+|+++|||+++|||+++|+.|+++|++|++++|+            .+.+++..+.+...+       .++.++.
T Consensus        41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~  113 (317)
T 3oec_A           41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG-------RRIIARQ  113 (317)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT-------CCEEEEE
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcC-------CeEEEEE
Confidence            456789999999999999999999999999999999876            455556666665433       5788999


Q ss_pred             eecCCCHHHHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           80 LDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        80 ~di~~~~~~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +|++ ++++++.+++++.+.++++|+||||||+..
T Consensus       114 ~Dv~-d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~  147 (317)
T 3oec_A          114 ADVR-DLASLQAVVDEALAEFGHIDILVSNVGISN  147 (317)
T ss_dssp             CCTT-CHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             CCCC-CHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            9996 899999999999999999999999999864

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.84  E-value=3.1e-20  Score=123.38  Aligned_cols=97  Identities=31%  Similarity=0.421  Sum_probs=79.1

Q ss_pred             CCCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEe-cccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHH
Q 033624           10 EPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAA-RRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGAT   88 (115)
Q Consensus        10 ~~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~   88 (115)
                      .|..++.+|+++|||+++|||++++++|+++|++|++++ ++.+..+.....+...+       .++.++.+|++ ++++
T Consensus        18 ~p~~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~-~~~~   89 (269)
T 3gk3_A           18 GPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAG-------RDFKAYAVDVA-DFES   89 (269)
T ss_dssp             ------CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTT-------CCCEEEECCTT-CHHH
T ss_pred             CchhhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC-------CceEEEEecCC-CHHH
Confidence            344567899999999999999999999999999999998 55555666666665433       56889999996 8999


Q ss_pred             HHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           89 IEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        89 ~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++.+++++.+.++++|+||||||+..
T Consensus        90 v~~~~~~~~~~~g~id~li~nAg~~~  115 (269)
T 3gk3_A           90 CERCAEKVLADFGKVDVLINNAGITR  115 (269)
T ss_dssp             HHHHHHHHHHHHSCCSEEEECCCCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCC
Confidence            99999999999999999999999864

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.84  E-value=3.8e-20  Score=122.25  Aligned_cols=94  Identities=26%  Similarity=0.386  Sum_probs=82.6

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ...+.+|+++|||+++|||++++++|+++|++|++++|+.+..++..+++...+       .++..+.+|++ ++++++.
T Consensus         9 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~D~~-~~~~~~~   80 (260)
T 2zat_A            9 RKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEG-------LSVTGTVCHVG-KAEDRER   80 (260)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTT-CHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CceEEEEccCC-CHHHHHH
Confidence            345779999999999999999999999999999999999888877777776433       46788999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++++.+.++++|+||||||+.
T Consensus        81 ~~~~~~~~~g~iD~lv~~Ag~~  102 (260)
T 2zat_A           81 LVAMAVNLHGGVDILVSNAAVN  102 (260)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCCC
Confidence            9999999999999999999974

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.84  E-value=4.4e-20  Score=123.21  Aligned_cols=96  Identities=28%  Similarity=0.390  Sum_probs=83.8

Q ss_pred             CCCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHH
Q 033624           10 EPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATI   89 (115)
Q Consensus        10 ~~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~   89 (115)
                      .++.++.+|+++|||+++|||++++++|+++|++|++++|+.+..++..+++...        .++.++.+|++ +++++
T Consensus        22 ~~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--------~~~~~~~~Dv~-d~~~v   92 (276)
T 2b4q_A           22 HPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY--------GDCQAIPADLS-SEAGA   92 (276)
T ss_dssp             CTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS--------SCEEECCCCTT-SHHHH
T ss_pred             ccccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--------CceEEEEeeCC-CHHHH
Confidence            3445678999999999999999999999999999999999988887777777532        26778899996 89999


Q ss_pred             HHHHHHHHHHcCCccEEEeCCccCC
Q 033624           90 EISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        90 ~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +.+++++.+.++++|+||||||+..
T Consensus        93 ~~~~~~~~~~~g~iD~lvnnAg~~~  117 (276)
T 2b4q_A           93 RRLAQALGELSARLDILVNNAGTSW  117 (276)
T ss_dssp             HHHHHHHHHHCSCCSEEEECCCCCC
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCC
Confidence            9999999999999999999999753

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.84  E-value=4.4e-20  Score=121.23  Aligned_cols=92  Identities=33%  Similarity=0.564  Sum_probs=80.5

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEec-ccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      +++|+++|||+++|||++++++|+++|++|+++++ +.+..++..++++..+       .++.++.+|++ ++++++.++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~-d~~~v~~~~   73 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKG-------VDSFAIQANVA-DADEVKAMI   73 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------SCEEEEECCTT-CHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-------CcEEEEEccCC-CHHHHHHHH
Confidence            46899999999999999999999999999998877 4566777777776543       56889999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+.++++|+||||||+..
T Consensus        74 ~~~~~~~g~id~lv~nAg~~~   94 (246)
T 3osu_A           74 KEVVSQFGSLDVLVNNAGITR   94 (246)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCCC
Confidence            999999999999999999864

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.84  E-value=3.7e-20  Score=123.11  Aligned_cols=93  Identities=37%  Similarity=0.488  Sum_probs=78.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEe-cccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAA-RRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ++.+|+++|||+++|||+++|++|+++|++|++.+ ++.+..++..+.++..+       .++.++.+|++ ++++++.+
T Consensus        24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~-~~~~v~~~   95 (267)
T 3u5t_A           24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAG-------GKALTAQADVS-DPAAVRRL   95 (267)
T ss_dssp             ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTT-------CCEEEEECCTT-CHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-------CeEEEEEcCCC-CHHHHHHH
Confidence            45799999999999999999999999999999874 55666677777776543       56889999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+.++++|+||||||+..
T Consensus        96 ~~~~~~~~g~iD~lvnnAG~~~  117 (267)
T 3u5t_A           96 FATAEEAFGGVDVLVNNAGIMP  117 (267)
T ss_dssp             HHHHHHHHSCEEEEEECCCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCCCC
Confidence            9999999999999999999864

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.84  E-value=1.7e-20  Score=125.50  Aligned_cols=94  Identities=31%  Similarity=0.419  Sum_probs=79.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+.+|+++|||+++|||+++|++|+++|++|++++|+.+..++..+++...+      ...+.++.+|++ ++++++.+
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~-d~~~v~~~  101 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT------GNIVRAVVCDVG-DPDQVAAL  101 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH------SSCEEEEECCTT-CHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------CCeEEEEEcCCC-CHHHHHHH
Confidence            34679999999999999999999999999999999999988888877775432      123588999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|+||||||+.
T Consensus       102 ~~~~~~~~g~iD~lvnnAG~~  122 (281)
T 4dry_A          102 FAAVRAEFARLDLLVNNAGSN  122 (281)
T ss_dssp             HHHHHHHHSCCSEEEECCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCCC
Confidence            999999999999999999985

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.84  E-value=3.2e-20  Score=122.50  Aligned_cols=90  Identities=30%  Similarity=0.370  Sum_probs=73.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+|+++|||+++|||++++++|+++|++|++++|+.+..++..+++.          .++.++.+|++ ++++++.++
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dv~-~~~~v~~~~   72 (257)
T 3tpc_A            4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELG----------AAVRFRNADVT-NEADATAAL   72 (257)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC----------------------CEEEECCTT-CHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC----------CceEEEEccCC-CHHHHHHHH
Confidence            4679999999999999999999999999999999999887776655541          46788999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+.++++|+||||||+..
T Consensus        73 ~~~~~~~g~id~lv~nAg~~~   93 (257)
T 3tpc_A           73 AFAKQEFGHVHGLVNCAGTAP   93 (257)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCCC
Confidence            999999999999999999863

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.84  E-value=6.8e-20  Score=121.29  Aligned_cols=92  Identities=30%  Similarity=0.423  Sum_probs=82.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+|+++|||+++|||++++++|+++|++|++++|+.+..++..++++..+       .++.++.+|++ ++++++.++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~~   75 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG-------VEARSYVCDVT-SEEAVIGTV   75 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-------SCEEEEECCTT-CHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEEecCC-CHHHHHHHH
Confidence            4678999999999999999999999999999999999888888777776543       46888999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|+||||||+.
T Consensus        76 ~~~~~~~g~id~lv~nAg~~   95 (262)
T 1zem_A           76 DSVVRDFGKIDFLFNNAGYQ   95 (262)
T ss_dssp             HHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHhCCCCEEEECCCCC
Confidence            99999999999999999975

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.84  E-value=4.2e-20  Score=125.59  Aligned_cols=95  Identities=26%  Similarity=0.501  Sum_probs=84.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .++.+++++|||+++|||++++++|+++|++|++++|+.+.+++..+.+...+     ...++.++.+|++ ++++++.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~~Dl~-~~~~v~~~   77 (319)
T 3ioy_A            4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEG-----SGPEVMGVQLDVA-SREGFKMA   77 (319)
T ss_dssp             CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-----CGGGEEEEECCTT-CHHHHHHH
T ss_pred             cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-----CCCeEEEEECCCC-CHHHHHHH
Confidence            45679999999999999999999999999999999999998888888776432     1237889999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++.+.+.++++|+||||||+.
T Consensus        78 ~~~~~~~~g~id~lv~nAg~~   98 (319)
T 3ioy_A           78 ADEVEARFGPVSILCNNAGVN   98 (319)
T ss_dssp             HHHHHHHTCCEEEEEECCCCC
T ss_pred             HHHHHHhCCCCCEEEECCCcC
Confidence            999999999999999999975

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.84  E-value=5e-20  Score=120.90  Aligned_cols=92  Identities=41%  Similarity=0.650  Sum_probs=80.8

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEec-ccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      +.+++++|||+++|||++++++|+++|++|++++| +.+..++..++++..+       .++.++.+|++ ++++++.++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~~   73 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLG-------SDAIAVRADVA-NAEDVTNMV   73 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------CCEEEEECCTT-CHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-------CcEEEEEcCCC-CHHHHHHHH
Confidence            56899999999999999999999999999999999 7777777777775432       46788999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+.++++|+||||||+..
T Consensus        74 ~~~~~~~g~id~lv~nAg~~~   94 (246)
T 2uvd_A           74 KQTVDVFGQVDILVNNAGVTK   94 (246)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCCC
Confidence            999999999999999999753

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.84  E-value=5.1e-20  Score=120.34  Aligned_cols=87  Identities=24%  Similarity=0.362  Sum_probs=78.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .+++++|||+++|||++++++|+++|++|++++|+.+.+++..+++.          .++.++.+|++ ++++++.++++
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~-~~~~v~~~~~~   70 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG----------NAVIGIVADLA-HHEDVDVAFAA   70 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----------GGEEEEECCTT-SHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----------CCceEEECCCC-CHHHHHHHHHH
Confidence            47899999999999999999999999999999999988888777762          35889999996 89999999999


Q ss_pred             HHHHcCCccEEEeCCccC
Q 033624           96 AWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~  113 (115)
                      +.+.++++|+||||||+.
T Consensus        71 ~~~~~g~id~lvnnAg~~   88 (235)
T 3l6e_A           71 AVEWGGLPELVLHCAGTG   88 (235)
T ss_dssp             HHHHHCSCSEEEEECCCC
T ss_pred             HHHhcCCCcEEEECCCCC
Confidence            999999999999999985

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.84  E-value=8.4e-20  Score=121.52  Aligned_cols=93  Identities=26%  Similarity=0.403  Sum_probs=82.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      +.+.+++++|||+++|||++++++|+++|++|++++|+.+.+++..++++..+       .++.++.+|++ ++++++.+
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~   88 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG-------LNVEGSVCDLL-SRTERDKL   88 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTT-CHHHHHHH
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CceEEEECCCC-CHHHHHHH
Confidence            45789999999999999999999999999999999999888877777776433       46888999996 89999999


Q ss_pred             HHHHHHHc-CCccEEEeCCccC
Q 033624           93 VQKAWEAF-GRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~-~~id~li~naG~~  113 (115)
                      ++++.+.+ +++|+||||||+.
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~  110 (273)
T 1ae1_A           89 MQTVAHVFDGKLNILVNNAGVV  110 (273)
T ss_dssp             HHHHHHHTTSCCCEEEECCCCC
T ss_pred             HHHHHHHcCCCCcEEEECCCCC
Confidence            99999999 8999999999975

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.84  E-value=5.2e-20  Score=124.03  Aligned_cols=97  Identities=32%  Similarity=0.496  Sum_probs=82.7

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      +..+.+|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++...+    ....++.++.+|++ ++++++.
T Consensus        21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~~Dv~-d~~~v~~   95 (297)
T 1xhl_A           21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAG----VPAEKINAVVADVT-EASGQDD   95 (297)
T ss_dssp             --CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----CCGGGEEEEECCTT-SHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC----CCCceEEEEecCCC-CHHHHHH
Confidence            345789999999999999999999999999999999999888887777775432    00126889999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++++.+.++++|+||||||+.
T Consensus        96 ~~~~~~~~~g~iD~lvnnAG~~  117 (297)
T 1xhl_A           96 IINTTLAKFGKIDILVNNAGAN  117 (297)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHhcCCCCEEEECCCcC
Confidence            9999999999999999999975

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.84  E-value=7.5e-20  Score=120.77  Aligned_cols=91  Identities=37%  Similarity=0.573  Sum_probs=82.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .++.+|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++.          .++.++.+|++ ++++++.+
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~-~~~~~~~~   73 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIG----------DAALAVAADIS-KEADVDAA   73 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----------TTEEEEECCTT-SHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC----------CceEEEEecCC-CHHHHHHH
Confidence            35789999999999999999999999999999999999988888777662          46789999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+.++++|+||||||+..
T Consensus        74 ~~~~~~~~g~id~li~~Ag~~~   95 (261)
T 3n74_A           74 VEAALSKFGKVDILVNNAGIGH   95 (261)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHhcCCCCEEEECCccCC
Confidence            9999999999999999999864

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.84  E-value=6.9e-20  Score=123.32  Aligned_cols=97  Identities=13%  Similarity=0.142  Sum_probs=80.7

Q ss_pred             cCCCCCCCCcEEEEecCCC--hHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCH
Q 033624            9 LEPWHDLNEKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADG   86 (115)
Q Consensus         9 ~~~~~~~~~~~~lvtG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~   86 (115)
                      |.++..+.+|+++|||+++  |||++++++|+++|++|++++|+.+..+...+..+..        ..+.++.+|++ ++
T Consensus        22 m~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~Dv~-d~   92 (296)
T 3k31_A           22 MRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL--------GVKLTVPCDVS-DA   92 (296)
T ss_dssp             CCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH--------TCCEEEECCTT-CH
T ss_pred             ccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc--------CCeEEEEcCCC-CH
Confidence            3445567899999999986  9999999999999999999999976555444443322        24678999996 89


Q ss_pred             HHHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           87 ATIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        87 ~~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+++++.+.++++|+||||||+..
T Consensus        93 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~  120 (296)
T 3k31_A           93 ESVDNMFKVLAEEWGSLDFVVHAVAFSD  120 (296)
T ss_dssp             HHHHHHHHHHHHHHSCCSEEEECCCCCC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence            9999999999999999999999999863

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.83  E-value=4.1e-20  Score=123.59  Aligned_cols=92  Identities=29%  Similarity=0.473  Sum_probs=80.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEec-ccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ..+.+|+++|||+++|||++++++|+++|++|+++++ +.+..++..+++...+       .++.++.+|++ ++++++.
T Consensus        25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~-d~~~v~~   96 (280)
T 4da9_A           25 TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLG-------ARVIFLRADLA-DLSSHQA   96 (280)
T ss_dssp             SCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTT-------CCEEEEECCTT-SGGGHHH
T ss_pred             hccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC-------CcEEEEEecCC-CHHHHHH
Confidence            4567999999999999999999999999999999985 6667777777776543       57889999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCcc
Q 033624           92 SVQKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~  112 (115)
                      +++++.+.++++|+||||||+
T Consensus        97 ~~~~~~~~~g~iD~lvnnAg~  117 (280)
T 4da9_A           97 TVDAVVAEFGRIDCLVNNAGI  117 (280)
T ss_dssp             HHHHHHHHHSCCCEEEEECC-
T ss_pred             HHHHHHHHcCCCCEEEECCCc
Confidence            999999999999999999998

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.83  E-value=6.4e-20  Score=122.86  Aligned_cols=96  Identities=31%  Similarity=0.451  Sum_probs=80.7

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc-chHHHHHHHhh-CCCCCCCCCccceEEEEeecCCC---
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEIN-KPGMVGSPDSVRAVAVELDVCAD---   85 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~di~~~---   85 (115)
                      +..++.+++++|||+++|||++++++|+++|++|++++|+. +..++..+++. ..+       .++.++.+|++ +   
T Consensus        17 ~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~-------~~~~~~~~Dv~-~~~~   88 (288)
T 2x9g_A           17 RGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERS-------NTAVVCQADLT-NSNV   88 (288)
T ss_dssp             -----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHST-------TCEEEEECCCS-CSTT
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcC-------CceEEEEeecC-CccC
Confidence            34567899999999999999999999999999999999998 77777777765 222       46889999996 8   


Q ss_pred             -HHHHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           86 -GATIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        86 -~~~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                       +++++.+++++.+.++++|+||||||+..
T Consensus        89 ~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~  118 (288)
T 2x9g_A           89 LPASCEEIINSCFRAFGRCDVLVNNASAFY  118 (288)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence             89999999999999999999999999753

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.83  E-value=7.2e-20  Score=122.39  Aligned_cols=89  Identities=31%  Similarity=0.483  Sum_probs=80.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+|+++|||+++|||++++++|+++|++|++++|+.+.+++..+.+          +.++.++.+|++ ++++++.++
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dv~-~~~~v~~~~   70 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH----------GGNAVGVVGDVR-SLQDQKRAA   70 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----------BTTEEEEECCTT-CHHHHHHHH
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc----------CCcEEEEEcCCC-CHHHHHHHH
Confidence            467999999999999999999999999999999999988877766554          246889999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|+||||||+.
T Consensus        71 ~~~~~~~g~iD~lvnnAg~~   90 (281)
T 3zv4_A           71 ERCLAAFGKIDTLIPNAGIW   90 (281)
T ss_dssp             HHHHHHHSCCCEEECCCCCC
T ss_pred             HHHHHhcCCCCEEEECCCcC
Confidence            99999999999999999985

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.83  E-value=1.1e-19  Score=118.95  Aligned_cols=94  Identities=27%  Similarity=0.445  Sum_probs=81.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeec--CCCHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDV--CADGATIE   90 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di--~~~~~~~~   90 (115)
                      ..+.+|+++|||+++|||++++++|+++|++|++++|+.+.+++..++++..+      ..+..++.+|+  + +.++++
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~d~d~~-~~~~~~   82 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG------QPQPLIIALNLENA-TAQQYR   82 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------SCCCEEEECCTTTC-CHHHHH
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC------CCCceEEEeccccC-CHHHHH
Confidence            45789999999999999999999999999999999999999888888887543      12345555555  6 789999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .+++++.+.++++|+||||||+.
T Consensus        83 ~~~~~~~~~~g~id~lv~nAg~~  105 (247)
T 3i1j_A           83 ELAARVEHEFGRLDGLLHNASII  105 (247)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCC
T ss_pred             HHHHHHHHhCCCCCEEEECCccC
Confidence            99999999999999999999985

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.83  E-value=6.2e-20  Score=122.62  Aligned_cols=91  Identities=37%  Similarity=0.520  Sum_probs=81.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .++.+|+++|||+++|||++++++|+++|++|++++|+.+..++..+.+.          .++.++.+|++ ++++++.+
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dv~-d~~~v~~~   93 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIG----------CGAAACRVDVS-DEQQIIAM   93 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC----------SSCEEEECCTT-CHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----------CcceEEEecCC-CHHHHHHH
Confidence            35789999999999999999999999999999999999988887777662          45788999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+.++++|+||||||+..
T Consensus        94 ~~~~~~~~g~iD~lvnnAg~~~  115 (277)
T 3gvc_A           94 VDACVAAFGGVDKLVANAGVVH  115 (277)
T ss_dssp             HHHHHHHHSSCCEEEECCCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCCCC
Confidence            9999999999999999999853

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.83  E-value=8.9e-20  Score=121.24  Aligned_cols=94  Identities=28%  Similarity=0.434  Sum_probs=81.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc-cchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .++.+|+++|||+++|||+++|++|+++|++|++++|+ .+..+...+.++..+       .++.++.+|++ ++++++.
T Consensus        25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~v~~   96 (271)
T 4iin_A           25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKG-------YKAAVIKFDAA-SESDFIE   96 (271)
T ss_dssp             CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------CCEEEEECCTT-CHHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-------CceEEEECCCC-CHHHHHH
Confidence            45789999999999999999999999999999999995 444555666665443       57889999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++++.+.++++|+||||||+..
T Consensus        97 ~~~~~~~~~g~id~li~nAg~~~  119 (271)
T 4iin_A           97 AIQTIVQSDGGLSYLVNNAGVVR  119 (271)
T ss_dssp             HHHHHHHHHSSCCEEEECCCCCC
T ss_pred             HHHHHHHhcCCCCEEEECCCcCC
Confidence            99999999999999999999864

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.83  E-value=9.9e-20  Score=121.13  Aligned_cols=90  Identities=30%  Similarity=0.437  Sum_probs=81.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+.+|+++|||+++|||++++++|+++|++|++++|+.+.+++..+.+.          .++.++.+|++ ++++++.+
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dv~-~~~~v~~~   75 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVG----------RGAVHHVVDLT-NEVSVRAL   75 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHC----------TTCEEEECCTT-CHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC----------CCeEEEECCCC-CHHHHHHH
Confidence            35789999999999999999999999999999999999998888777762          35778999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|+||||||+.
T Consensus        76 ~~~~~~~~g~id~lv~nAg~~   96 (271)
T 3tzq_B           76 IDFTIDTFGRLDIVDNNAAHS   96 (271)
T ss_dssp             HHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCCC
Confidence            999999999999999999986

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.83  E-value=8.4e-20  Score=120.79  Aligned_cols=93  Identities=37%  Similarity=0.564  Sum_probs=81.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+|+++|||+++|||++++++|+++|++|++++|+.+..++..+++....      +.++.++.+|++ ++++++.++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~~D~~-~~~~~~~~~   76 (263)
T 3ai3_A            4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF------GVRVLEVAVDVA-TPEGVDAVV   76 (263)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH------CCCEEEEECCTT-SHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhc------CCceEEEEcCCC-CHHHHHHHH
Confidence            4678999999999999999999999999999999999888777776665320      136788999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|+||||||+.
T Consensus        77 ~~~~~~~g~id~lv~~Ag~~   96 (263)
T 3ai3_A           77 ESVRSSFGGADILVNNAGTG   96 (263)
T ss_dssp             HHHHHHHSSCSEEEECCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCC
Confidence            99999999999999999975

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.83  E-value=8.7e-20  Score=121.48  Aligned_cols=95  Identities=31%  Similarity=0.493  Sum_probs=80.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+|+++|||+++|||++++++|+++|++|++++|+.+.+++..+.+....    ..+.++.++.+|++ ++++++.++
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~D~~-~~~~~~~~~   77 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAG----VSEQNVNSVVADVT-TDAGQDEIL   77 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----CCGGGEEEEECCTT-SHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcc----cCCCceeEEecccC-CHHHHHHHH
Confidence            4678999999999999999999999999999999999888877777763111    01246889999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|+||||||+.
T Consensus        78 ~~~~~~~g~id~lv~~Ag~~   97 (278)
T 1spx_A           78 STTLGKFGKLDILVNNAGAA   97 (278)
T ss_dssp             HHHHHHHSCCCEEEECCC--
T ss_pred             HHHHHHcCCCCEEEECCCCC
Confidence            99999999999999999975

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.83  E-value=1e-20  Score=124.50  Aligned_cols=88  Identities=39%  Similarity=0.476  Sum_probs=72.4

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .++|+||+++|||+++|||+++|+.|++.|++|++++|+.+  ++..+.+++.+       .++..+.+|++ +++.++.
T Consensus         4 ~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g-------~~~~~~~~Dv~-d~~~v~~   73 (247)
T 4hp8_A            4 PFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDG-------GNASALLIDFA-DPLAAKD   73 (247)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTT-------CCEEEEECCTT-STTTTTT
T ss_pred             CcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhC-------CcEEEEEccCC-CHHHHHH
Confidence            46799999999999999999999999999999999999865  34455565543       57889999996 6766665


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++     .+++||+||||||+..
T Consensus        74 ~~-----~~g~iDiLVNNAGi~~   91 (247)
T 4hp8_A           74 SF-----TDAGFDILVNNAGIIR   91 (247)
T ss_dssp             SS-----TTTCCCEEEECCCCCC
T ss_pred             HH-----HhCCCCEEEECCCCCC
Confidence            54     3579999999999864

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.83  E-value=1.9e-19  Score=120.00  Aligned_cols=97  Identities=37%  Similarity=0.461  Sum_probs=78.3

Q ss_pred             ccCCCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHH
Q 033624            8 HLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGA   87 (115)
Q Consensus         8 ~~~~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~   87 (115)
                      .|....++.+|+++|||+++|||+++|++|+++|++|++++|+ +..++..+++...+       .++.++.+|++ +.+
T Consensus        22 ~m~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~-------~~~~~~~~Dv~-d~~   92 (273)
T 3uf0_A           22 SMTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGG-------GSAEAVVADLA-DLE   92 (273)
T ss_dssp             ---CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTT-------CEEEEEECCTT-CHH
T ss_pred             hcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcC-------CcEEEEEecCC-CHH
Confidence            3334456889999999999999999999999999999999965 55566666776543       57889999996 899


Q ss_pred             HHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           88 TIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        88 ~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+ .+..+.++++|+||||||+..
T Consensus        93 ~v~~~-~~~~~~~g~iD~lv~nAg~~~  118 (273)
T 3uf0_A           93 GAANV-AEELAATRRVDVLVNNAGIIA  118 (273)
T ss_dssp             HHHHH-HHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHH-HHHHHhcCCCcEEEECCCCCC
Confidence            99988 444566799999999999864

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.83  E-value=1e-19  Score=120.96  Aligned_cols=94  Identities=27%  Similarity=0.456  Sum_probs=81.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc-cchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ..+.+|+++|||+++|||++++++|+++|++|++++++ .+..++..++++..+       .++.++.+|++ ++++++.
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~-~~~~v~~   85 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG-------SDAIAIKADIR-QVPEIVK   85 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------CCEEEEECCTT-SHHHHHH
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-------CcEEEEEcCCC-CHHHHHH
Confidence            46789999999999999999999999999999997764 555666777776543       57889999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++++.++++++|+||||||+..
T Consensus        86 ~~~~~~~~~g~id~lvnnAg~~~  108 (270)
T 3is3_A           86 LFDQAVAHFGHLDIAVSNSGVVS  108 (270)
T ss_dssp             HHHHHHHHHSCCCEEECCCCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCC
Confidence            99999999999999999999853

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.83  E-value=1.9e-19  Score=118.86  Aligned_cols=90  Identities=38%  Similarity=0.489  Sum_probs=80.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch--HHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR--LKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +|+++|||+++|||++++++|+++|++|++++|+.+.  .++..+.++..+       .++.++.+|++ ++++++.+++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~-~~~~v~~~~~   73 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAAD-------QKAVFVGLDVT-DKANFDSAID   73 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTT-------CCEEEEECCTT-CHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcC-------CcEEEEEccCC-CHHHHHHHHH
Confidence            6899999999999999999999999999999999877  777777776532       46888999996 8999999999


Q ss_pred             HHHHHcCCccEEEeCCccCC
Q 033624           95 KAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~~  114 (115)
                      ++.+.++++|+||||||+..
T Consensus        74 ~~~~~~g~iD~lv~nAg~~~   93 (258)
T 3a28_C           74 EAAEKLGGFDVLVNNAGIAQ   93 (258)
T ss_dssp             HHHHHHTCCCEEEECCCCCC
T ss_pred             HHHHHhCCCCEEEECCCCCC
Confidence            99999999999999999753

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.83  E-value=1.3e-19  Score=119.89  Aligned_cols=91  Identities=33%  Similarity=0.490  Sum_probs=79.1

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      +.++.+++++|||+++|||++++++|+++|++|++++|+.+..++..+.+.          .++.++.+|++ ++++++.
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~-d~~~v~~   75 (263)
T 3ak4_A            7 IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE----------NGGFAVEVDVT-KRASVDA   75 (263)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT----------TCCEEEECCTT-CHHHHHH
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----------cCCeEEEEeCC-CHHHHHH
Confidence            445789999999999999999999999999999999999877666554442          14678899996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++++.+.++++|+||||||+.
T Consensus        76 ~~~~~~~~~g~iD~lv~~Ag~~   97 (263)
T 3ak4_A           76 AMQKAIDALGGFDLLCANAGVS   97 (263)
T ss_dssp             HHHHHHHHHTCCCEEEECCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCcC
Confidence            9999999999999999999975

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.83  E-value=1.5e-19  Score=119.25  Aligned_cols=90  Identities=38%  Similarity=0.578  Sum_probs=80.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +|+++|||+++|||++++++|+++|++|++++|+.+..++..+.++..+       .++.++.+|++ ++++++.+++++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~v~~~~~~~   73 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG-------GHAVAVKVDVS-DRDQVFAAVEQA   73 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTT-SHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEEecCC-CHHHHHHHHHHH
Confidence            6899999999999999999999999999999999888877777775432       46788999996 899999999999


Q ss_pred             HHHcCCccEEEeCCccCC
Q 033624           97 WEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        97 ~~~~~~id~li~naG~~~  114 (115)
                      .+.++++|+||||||+..
T Consensus        74 ~~~~g~id~lv~nAg~~~   91 (256)
T 1geg_A           74 RKTLGGFDVIVNNAGVAP   91 (256)
T ss_dssp             HHHTTCCCEEEECCCCCC
T ss_pred             HHHhCCCCEEEECCCCCC
Confidence            999999999999999753

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.83  E-value=7.9e-20  Score=120.36  Aligned_cols=96  Identities=29%  Similarity=0.416  Sum_probs=79.5

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEe-cccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAA-RRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATI   89 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~   89 (115)
                      +.....+|+++|||+++|||+++|++|+++|++|++++ |+.+...+..+.++..+       .++.++.+|++ +.+++
T Consensus         7 ~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~-~~~~v   78 (256)
T 3ezl_A            7 HHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALG-------FDFYASEGNVG-DWDST   78 (256)
T ss_dssp             ------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTT-------CCCEEEECCTT-CHHHH
T ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-------CeeEEEecCCC-CHHHH
Confidence            44567799999999999999999999999999999887 66677777676666443       56889999996 89999


Q ss_pred             HHHHHHHHHHcCCccEEEeCCccCC
Q 033624           90 EISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        90 ~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +.+++++.+.++++|+||||||+..
T Consensus        79 ~~~~~~~~~~~g~id~lv~~Ag~~~  103 (256)
T 3ezl_A           79 KQAFDKVKAEVGEIDVLVNNAGITR  103 (256)
T ss_dssp             HHHHHHHHHHTCCEEEEEECCCCCC
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCC
Confidence            9999999999999999999999864

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.83  E-value=1.3e-19  Score=121.85  Aligned_cols=93  Identities=28%  Similarity=0.383  Sum_probs=79.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc--chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV--DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      .++.+|+++|||+++|||++++++|+++|++|++++|+.  ...+...+.++..+       .++.++.+|++ ++++++
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~-d~~~v~  116 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG-------RKAVLLPGDLS-DESFAR  116 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT-------CCEEECCCCTT-SHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC-------CcEEEEEecCC-CHHHHH
Confidence            457899999999999999999999999999999998873  34455555555433       56888999996 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .+++++.+.++++|+||||||+.
T Consensus       117 ~~~~~~~~~~g~iD~lv~nAg~~  139 (294)
T 3r3s_A          117 SLVHKAREALGGLDILALVAGKQ  139 (294)
T ss_dssp             HHHHHHHHHHTCCCEEEECCCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCc
Confidence            99999999999999999999975

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.83  E-value=2.2e-19  Score=119.44  Aligned_cols=95  Identities=25%  Similarity=0.354  Sum_probs=84.1

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ...+.+++++|||+++|||++++++|+++|++|++++|+.+..++..++++..+       .++.++.+|++ ++++++.
T Consensus        26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dl~-~~~~v~~   97 (272)
T 1yb1_A           26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG-------AKVHTFVVDCS-NREDIYS   97 (272)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTT-CHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC-------CeEEEEEeeCC-CHHHHHH
Confidence            345789999999999999999999999999999999999888887777776533       46889999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++++.+.++++|+||||||+..
T Consensus        98 ~~~~~~~~~g~iD~li~~Ag~~~  120 (272)
T 1yb1_A           98 SAKKVKAEIGDVSILVNNAGVVY  120 (272)
T ss_dssp             HHHHHHHHTCCCSEEEECCCCCC
T ss_pred             HHHHHHHHCCCCcEEEECCCcCC
Confidence            99999999999999999999753

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.83  E-value=3.8e-20  Score=120.52  Aligned_cols=92  Identities=36%  Similarity=0.538  Sum_probs=80.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      ++|+++|||+++|||++++++|+++|++|++++|+.+..++..+++....      +.++.++.+|++ ++++++.++++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~D~~-~~~~v~~~~~~   73 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ------GVEVFYHHLDVS-KAESVEEFSKK   73 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH------CCCEEEEECCTT-CHHHHHHHCC-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc------CCeEEEEEeccC-CHHHHHHHHHH
Confidence            36899999999999999999999999999999999988888777775221      257889999996 89999999999


Q ss_pred             HHHHcCCccEEEeCCccCC
Q 033624           96 AWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~~  114 (115)
                      +.+.++++|+||||||+..
T Consensus        74 ~~~~~g~id~li~~Ag~~~   92 (235)
T 3l77_A           74 VLERFGDVDVVVANAGLGY   92 (235)
T ss_dssp             HHHHHSSCSEEEECCCCCC
T ss_pred             HHHhcCCCCEEEECCcccc
Confidence            9999999999999999853

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.83  E-value=1.1e-19  Score=120.54  Aligned_cols=90  Identities=33%  Similarity=0.489  Sum_probs=79.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+++++|||+++|||++++++|+++|++|++++|+.+.+++..+++.          .++.++.+|++ ++++++.++
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~-~~~~v~~~~   71 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE----------AEAIAVVADVS-DPKAVEAVF   71 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC----------SSEEEEECCTT-SHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----------CceEEEEcCCC-CHHHHHHHH
Confidence            4678999999999999999999999999999999999877766555442          35788999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+.++++|+||||||+..
T Consensus        72 ~~~~~~~g~iD~lvnnAg~~~   92 (263)
T 2a4k_A           72 AEALEEFGRLHGVAHFAGVAH   92 (263)
T ss_dssp             HHHHHHHSCCCEEEEGGGGTT
T ss_pred             HHHHHHcCCCcEEEECCCCCC
Confidence            999999999999999999753

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.82  E-value=9.6e-20  Score=121.55  Aligned_cols=93  Identities=24%  Similarity=0.288  Sum_probs=82.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .++.+|+++|||+++|||++++++|+++|++|++++|+.+..++..+++...+       .++.++.+|++ +.++++.+
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~-~~~~~~~~  100 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG-------GTAQELAGDLS-EAGAGTDL  100 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT-------CCEEEEECCTT-STTHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-------CeEEEEEecCC-CHHHHHHH
Confidence            45789999999999999999999999999999999999988888888876543       57889999996 88999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+. +++|+||||||+..
T Consensus       101 ~~~~~~~-g~iD~lvnnAg~~~  121 (275)
T 4imr_A          101 IERAEAI-APVDILVINASAQI  121 (275)
T ss_dssp             HHHHHHH-SCCCEEEECCCCCC
T ss_pred             HHHHHHh-CCCCEEEECCCCCC
Confidence            9998777 99999999999753

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.82  E-value=8.9e-20  Score=120.55  Aligned_cols=93  Identities=31%  Similarity=0.439  Sum_probs=80.4

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch-HHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-LKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      +.+|+++|||+++|||++++++|+++|++|++++|+.+. .++..+.+....      +.++.++.+|++ ++++++.++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~~D~~-~~~~v~~~~   74 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH------GVKVLYDGADLS-KGEAVRGLV   74 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH------TSCEEEECCCTT-SHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhcc------CCcEEEEECCCC-CHHHHHHHH
Confidence            568999999999999999999999999999999999877 777666664320      135788999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+.++++|+||||||+..
T Consensus        75 ~~~~~~~g~iD~lv~~Ag~~~   95 (260)
T 1x1t_A           75 DNAVRQMGRIDILVNNAGIQH   95 (260)
T ss_dssp             HHHHHHHSCCSEEEECCCCCC
T ss_pred             HHHHHhcCCCCEEEECCCCCC
Confidence            999999999999999999753

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.82  E-value=7.5e-20  Score=122.85  Aligned_cols=94  Identities=28%  Similarity=0.350  Sum_probs=80.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEe-cccchHHHHHHHhh-CCCCCCCCCccceEEEEeecCCCHH---
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAA-RRVDRLKSLCDEIN-KPGMVGSPDSVRAVAVELDVCADGA---   87 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~di~~~~~---   87 (115)
                      .++.+|+++|||+++|||+++++.|+++|++|++++ |+.+.+++..+++. ..+       .++.++.+|++ +++   
T Consensus         5 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~-------~~~~~~~~Dl~-~~~~~~   76 (291)
T 1e7w_A            5 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-------NSAITVQADLS-NVATAP   76 (291)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-------TCEEEEECCCS-SSCBCC
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcC-------CeeEEEEeecC-Cccccc
Confidence            356799999999999999999999999999999999 99888887777775 222       46889999996 777   


Q ss_pred             --------------HHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           88 --------------TIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        88 --------------~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                                    +++.+++++.+.++++|+||||||+..
T Consensus        77 ~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~  117 (291)
T 1e7w_A           77 VSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY  117 (291)
T ss_dssp             CC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             ccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence                          999999999999999999999999853

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.82  E-value=2.2e-19  Score=118.25  Aligned_cols=93  Identities=29%  Similarity=0.426  Sum_probs=82.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+++++|||+++|||++++++|+++|++|++++|+.+..++..+.++..+       .++.++.+|++ ++++++.++
T Consensus        10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~D~~-~~~~~~~~~   81 (260)
T 3awd_A           10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG-------HDVSSVVMDVT-NTESVQNAV   81 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTT-CHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CceEEEEecCC-CHHHHHHHH
Confidence            4679999999999999999999999999999999999887777777776432       46889999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+.++++|+||||||+..
T Consensus        82 ~~~~~~~~~id~vi~~Ag~~~  102 (260)
T 3awd_A           82 RSVHEQEGRVDILVACAGICI  102 (260)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCCC
Confidence            999999999999999999753

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.82  E-value=1.7e-19  Score=119.52  Aligned_cols=90  Identities=22%  Similarity=0.189  Sum_probs=74.9

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      +.++.+|+++|||+++|||++++++|+++|++|++++|+.+...+.....            .+.++.+|++ ++++++.
T Consensus        22 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------------~~~~~~~Dv~-~~~~v~~   88 (260)
T 3gem_A           22 HMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA------------GAVALYGDFS-CETGIMA   88 (260)
T ss_dssp             -----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH------------TCEEEECCTT-SHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc------------CCeEEECCCC-CHHHHHH
Confidence            34577999999999999999999999999999999999987654433332            2678899996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++++.+.++++|+||||||+..
T Consensus        89 ~~~~~~~~~g~iD~lv~nAg~~~  111 (260)
T 3gem_A           89 FIDLLKTQTSSLRAVVHNASEWL  111 (260)
T ss_dssp             HHHHHHHHCSCCSEEEECCCCCC
T ss_pred             HHHHHHHhcCCCCEEEECCCccC
Confidence            99999999999999999999753

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.82  E-value=2.9e-19  Score=120.06  Aligned_cols=96  Identities=27%  Similarity=0.432  Sum_probs=83.3

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      +...+.+++++|||+++|||++++++|+++|++|++++|+.+..++..+.+....      +.++.++.+|++ ++++++
T Consensus        20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~~Dl~-~~~~~~   92 (302)
T 1w6u_A           20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT------GNKVHAIQCDVR-DPDMVQ   92 (302)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH------SSCEEEEECCTT-CHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc------CCceEEEEeCCC-CHHHHH
Confidence            3446789999999999999999999999999999999999888777777665321      146889999996 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .+++++.+.++++|+||||||+.
T Consensus        93 ~~~~~~~~~~g~id~li~~Ag~~  115 (302)
T 1w6u_A           93 NTVSELIKVAGHPNIVINNAAGN  115 (302)
T ss_dssp             HHHHHHHHHTCSCSEEEECCCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCC
Confidence            99999999999999999999974

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.82  E-value=1.2e-19  Score=120.67  Aligned_cols=94  Identities=27%  Similarity=0.346  Sum_probs=79.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEec-ccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCH----HH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADG----AT   88 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~----~~   88 (115)
                      .+.+++++|||+++|||++++++|+++|++|++++| +.+..++..++++...      +.++.++.+|++ ++    ++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~~Dl~-~~~~~~~~   80 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR------AGSAVLCKGDLS-LSSSLLDC   80 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS------TTCEEEEECCCS-SSTTHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhc------CCceEEEeccCC-CccccHHH
Confidence            457899999999999999999999999999999999 8877777777775421      146788999996 78    89


Q ss_pred             HHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           89 IEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        89 ~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++.+++++.+.++++|+||||||+..
T Consensus        81 ~~~~~~~~~~~~g~id~lv~nAg~~~  106 (276)
T 1mxh_A           81 CEDIIDCSFRAFGRCDVLVNNASAYY  106 (276)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCC
Confidence            99999999999999999999999753

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.82  E-value=1.9e-19  Score=119.61  Aligned_cols=93  Identities=35%  Similarity=0.485  Sum_probs=80.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEE-ecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      +..+++++|||+++|||+++|++|+++|++|+++ .|+.+..+...+.+...+       .++.++.+|++ ++++++.+
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~-~~~~v~~~   94 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESG-------GEAVAIPGDVG-NAADIAAM   94 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------CEEEEEECCTT-CHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcC-------CcEEEEEcCCC-CHHHHHHH
Confidence            3458999999999999999999999999999776 677777777777776543       57889999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+.++++|+||||||+..
T Consensus        95 ~~~~~~~~g~id~li~nAg~~~  116 (272)
T 4e3z_A           95 FSAVDRQFGRLDGLVNNAGIVD  116 (272)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHhCCCCCEEEECCCCCC
Confidence            9999999999999999999863

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.82  E-value=3e-19  Score=118.78  Aligned_cols=88  Identities=31%  Similarity=0.471  Sum_probs=78.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+|+++|||+++|||++++++|+++|++|++++|+.+..+...+++.           .+.++.+|++ ++++++.++
T Consensus         6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------~~~~~~~Dv~-d~~~v~~~~   73 (270)
T 1yde_A            6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-----------GAVFILCDVT-QEDDVKTLV   73 (270)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-----------TEEEEECCTT-SHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----------CCeEEEcCCC-CHHHHHHHH
Confidence            4679999999999999999999999999999999999877766655542           3678899996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|+||||||+.
T Consensus        74 ~~~~~~~g~iD~lv~nAg~~   93 (270)
T 1yde_A           74 SETIRRFGRLDCVVNNAGHH   93 (270)
T ss_dssp             HHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCC
Confidence            99999999999999999975

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.82  E-value=3.6e-19  Score=118.98  Aligned_cols=94  Identities=29%  Similarity=0.525  Sum_probs=80.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch-HHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-LKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ..+.+|+++|||+++|||++++++|+++|++|++++|+.+. .+...+.+...+       .++.++.+|++ +.++++.
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~   96 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG-------SDAACVKANVG-VVEDIVR   96 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------CCEEEEECCTT-CHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC-------CCeEEEEcCCC-CHHHHHH
Confidence            45679999999999999999999999999999999998654 445555565432       46888999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++++.+.++++|+||||||+..
T Consensus        97 ~~~~~~~~~g~iD~lv~~Ag~~~  119 (283)
T 1g0o_A           97 MFEEAVKIFGKLDIVCSNSGVVS  119 (283)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCcCC
Confidence            99999999999999999999753

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.82  E-value=2.4e-19  Score=118.88  Aligned_cols=94  Identities=26%  Similarity=0.335  Sum_probs=79.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEE-ecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ..+++|+++|||+++|||++++++|+++|++|++. .|+.+..++..+.+...+       .++.++.+|++ ++++++.
T Consensus        22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dl~-~~~~~~~   93 (267)
T 4iiu_A           22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANG-------GNGRLLSFDVA-NREQCRE   93 (267)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------CCEEEEECCTT-CHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC-------CceEEEEecCC-CHHHHHH
Confidence            45678999999999999999999999999999665 566777777777776543       56889999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++++.+.++++|+||||||+..
T Consensus        94 ~~~~~~~~~g~id~li~nAg~~~  116 (267)
T 4iiu_A           94 VLEHEIAQHGAWYGVVSNAGIAR  116 (267)
T ss_dssp             HHHHHHHHHCCCSEEEECCCCCC
T ss_pred             HHHHHHHHhCCccEEEECCCCCC
Confidence            99999999999999999999864

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.82  E-value=4.6e-19  Score=117.46  Aligned_cols=94  Identities=29%  Similarity=0.472  Sum_probs=81.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+++++|||+++|||++++++|+++|++|++++|+.+..++..+.+....     .+.++.++.+|++ ++++++.++
T Consensus         4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~~D~~-~~~~v~~~~   77 (267)
T 2gdz_A            4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF-----EPQKTLFIQCDVA-DQQQLRDTF   77 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTS-----CGGGEEEEECCTT-SHHHHHHHH
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhc-----CCCceEEEecCCC-CHHHHHHHH
Confidence            3578999999999999999999999999999999999888777777775431     1246888999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +.+.+.++++|+||||||+.
T Consensus        78 ~~~~~~~g~id~lv~~Ag~~   97 (267)
T 2gdz_A           78 RKVVDHFGRLDILVNNAGVN   97 (267)
T ss_dssp             HHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCC
Confidence            99999999999999999975

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.82  E-value=2e-19  Score=118.88  Aligned_cols=89  Identities=35%  Similarity=0.515  Sum_probs=78.7

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +.+|+++|||+++|||++++++|+++|++|++++|+.+..++..++++..+       .++.++.+|++ ++++++.+++
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~-~~~~v~~~~~   74 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG-------GQCVPVVCDSS-QESEVRSLFE   74 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS-------SEEEEEECCTT-SHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcC-------CceEEEECCCC-CHHHHHHHHH
Confidence            578999999999999999999999999999999999888877777775432       46888999996 8999999999


Q ss_pred             HHHHH-cCCccEEEeCCc
Q 033624           95 KAWEA-FGRVDALVNNAG  111 (115)
Q Consensus        95 ~~~~~-~~~id~li~naG  111 (115)
                      ++.+. ++++|+||||||
T Consensus        75 ~~~~~~~g~id~lvnnAg   92 (260)
T 2qq5_A           75 QVDREQQGRLDVLVNNAY   92 (260)
T ss_dssp             HHHHHHTTCCCEEEECCC
T ss_pred             HHHHhcCCCceEEEECCc
Confidence            98876 899999999994

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.82  E-value=3.3e-19  Score=117.57  Aligned_cols=90  Identities=38%  Similarity=0.438  Sum_probs=78.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+++++|||+++|||++++++|+++|++|++++|+.+..++..+++          +.++.++.+|++ ++++++.++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~-~~~~~~~~~   70 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----------GDAARYQHLDVT-IEEDWQRVV   70 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----------GGGEEEEECCTT-CHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------CCceeEEEecCC-CHHHHHHHH
Confidence            467899999999999999999999999999999999987766655544          146788999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+.++++|+||||||+..
T Consensus        71 ~~~~~~~g~iD~lv~nAg~~~   91 (254)
T 1hdc_A           71 AYAREEFGSVDGLVNNAGIST   91 (254)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCCC
Confidence            999999999999999999753

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.82  E-value=4.7e-19  Score=117.25  Aligned_cols=89  Identities=33%  Similarity=0.446  Sum_probs=79.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+++++|||+++|||++++++|+++|++|++++|+.+..++..+.+.          .++.++.+|++ ++++++.++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~-~~~~v~~~~   72 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA----------DAARYVHLDVT-QPAQWKAAV   72 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG----------GGEEEEECCTT-CHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----------cCceEEEecCC-CHHHHHHHH
Confidence            4678999999999999999999999999999999999887776666553          24778899996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|+||||||+.
T Consensus        73 ~~~~~~~g~iD~lv~~Ag~~   92 (260)
T 1nff_A           73 DTAVTAFGGLHVLVNNAGIL   92 (260)
T ss_dssp             HHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCC
Confidence            99999999999999999975

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.81  E-value=5.1e-19  Score=118.34  Aligned_cols=95  Identities=34%  Similarity=0.421  Sum_probs=83.7

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ...+.+++++|||+++|||++++++|+++|++|++++|+.+..++..+.++..+       .++.++.+|++ ++++++.
T Consensus        39 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dl~-d~~~v~~  110 (285)
T 2c07_A           39 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG-------YESSGYAGDVS-KKEEISE  110 (285)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTT-------CCEEEEECCTT-CHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcC-------CceeEEECCCC-CHHHHHH
Confidence            345678999999999999999999999999999999999888887777776543       46888999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++++.+.++++|+||||||+..
T Consensus       111 ~~~~~~~~~~~id~li~~Ag~~~  133 (285)
T 2c07_A          111 VINKILTEHKNVDILVNNAGITR  133 (285)
T ss_dssp             HHHHHHHHCSCCCEEEECCCCCC
T ss_pred             HHHHHHHhcCCCCEEEECCCCCC
Confidence            99999999999999999999753

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.81  E-value=4.3e-19  Score=118.27  Aligned_cols=96  Identities=25%  Similarity=0.399  Sum_probs=83.4

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      +..+.+++++|||+++|||++++++|+++|++|++++|+.+..++..+.++..+     ...++.++.+|++ ++++++.
T Consensus        27 m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~-~~~~v~~  100 (279)
T 1xg5_A           27 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG-----YPGTLIPYRCDLS-NEEDILS  100 (279)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-----CSSEEEEEECCTT-CHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcC-----CCceEEEEEecCC-CHHHHHH
Confidence            345789999999999999999999999999999999999888887777776432     1246788999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++++.+.++++|+||||||+.
T Consensus       101 ~~~~~~~~~g~iD~vi~~Ag~~  122 (279)
T 1xg5_A          101 MFSAIRSQHSGVDICINNAGLA  122 (279)
T ss_dssp             HHHHHHHHHCCCSEEEECCCCC
T ss_pred             HHHHHHHhCCCCCEEEECCCCC
Confidence            9999999999999999999975

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.81  E-value=3.7e-19  Score=117.25  Aligned_cols=90  Identities=31%  Similarity=0.409  Sum_probs=80.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+++++|||+++|||++++++|+++|++|++++|+.+..++..+++   +       .++.++.+|++ ++++++.++
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-------~~~~~~~~D~~-~~~~v~~~~   71 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---G-------ERSMFVRHDVS-SEADWTLVM   71 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---C-------TTEEEECCCTT-CHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C-------CceEEEEccCC-CHHHHHHHH
Confidence            467999999999999999999999999999999999988777766665   1       35788999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +.+.+.++++|+||||||+..
T Consensus        72 ~~~~~~~g~id~lv~~Ag~~~   92 (253)
T 1hxh_A           72 AAVQRRLGTLNVLVNNAGILL   92 (253)
T ss_dssp             HHHHHHHCSCCEEEECCCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCCC
Confidence            999999999999999999753

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.81  E-value=6.2e-19  Score=117.07  Aligned_cols=94  Identities=23%  Similarity=0.409  Sum_probs=81.3

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      +...+.+++++|||+++|||++++++|+++|++|++++|+.+..+...+.+...        .++.++.+|++ ++++++
T Consensus        10 ~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~D~~-~~~~~~   80 (278)
T 2bgk_A           10 STNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP--------DVISFVHCDVT-KDEDVR   80 (278)
T ss_dssp             -CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT--------TTEEEEECCTT-CHHHHH
T ss_pred             CcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCC--------CceEEEECCCC-CHHHHH
Confidence            345678999999999999999999999999999999999887776666666321        26889999996 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .+++++.+.++++|+||||||+.
T Consensus        81 ~~~~~~~~~~~~id~li~~Ag~~  103 (278)
T 2bgk_A           81 NLVDTTIAKHGKLDIMFGNVGVL  103 (278)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCccc
Confidence            99999999999999999999975

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.81  E-value=5.2e-20  Score=120.87  Aligned_cols=82  Identities=37%  Similarity=0.557  Sum_probs=69.1

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +.||+++|||+++|||+++|+.|++.|++|++++|+.+.+++       .      ...++..+.+|++ +++++++++ 
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~-------~------~~~~~~~~~~Dv~-~~~~v~~~~-   73 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA-------P------RHPRIRREELDIT-DSQRLQRLF-   73 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS-------C------CCTTEEEEECCTT-CHHHHHHHH-
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh-------h------hcCCeEEEEecCC-CHHHHHHHH-
Confidence            579999999999999999999999999999999998765431       1      1246889999996 888877765 


Q ss_pred             HHHHHcCCccEEEeCCccCC
Q 033624           95 KAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~~  114 (115)
                         +++++||+||||||+..
T Consensus        74 ---~~~g~iDiLVNNAGi~~   90 (242)
T 4b79_A           74 ---EALPRLDVLVNNAGISR   90 (242)
T ss_dssp             ---HHCSCCSEEEECCCCCC
T ss_pred             ---HhcCCCCEEEECCCCCC
Confidence               45899999999999864

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.81  E-value=4.8e-19  Score=116.44  Aligned_cols=89  Identities=33%  Similarity=0.501  Sum_probs=76.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc-chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .+.+|+++|||+++|||++++++|+++|++|++++|+. +..++   .++..+       .++.++.+|++ ++++++.+
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~-------~~~~~~~~Dv~-~~~~v~~~   72 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLG-------RRVLTVKCDVS-QPGDVEAF   72 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTT-------CCEEEEECCTT-CHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcC-------CcEEEEEeecC-CHHHHHHH
Confidence            46789999999999999999999999999999999987 65554   232222       46788999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|+||||||+.
T Consensus        73 ~~~~~~~~g~id~lv~nAg~~   93 (249)
T 2ew8_A           73 GKQVISTFGRCDILVNNAGIY   93 (249)
T ss_dssp             HHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCCC
Confidence            999999999999999999975

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.81  E-value=4.7e-19  Score=116.81  Aligned_cols=90  Identities=41%  Similarity=0.498  Sum_probs=77.7

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +.+|+++|||+++|||++++++|+++|++|++++|+.+  +...+++...+       .++.++.+|++ ++++++.+++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~-------~~~~~~~~D~~-~~~~v~~~~~   71 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHG-------VKAVHHPADLS-DVAQIEALFA   71 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTS-------CCEEEECCCTT-SHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcC-------CceEEEeCCCC-CHHHHHHHHH
Confidence            56899999999999999999999999999999999876  44555565432       46788999996 8999999999


Q ss_pred             HHHHHcCCccEEEeCCccCC
Q 033624           95 KAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~~  114 (115)
                      ++.+.++++|+||||||+..
T Consensus        72 ~~~~~~g~id~lv~~Ag~~~   91 (255)
T 2q2v_A           72 LAEREFGGVDILVNNAGIQH   91 (255)
T ss_dssp             HHHHHHSSCSEEEECCCCCC
T ss_pred             HHHHHcCCCCEEEECCCCCC
Confidence            99999999999999999753

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.81  E-value=3.3e-19  Score=117.11  Aligned_cols=91  Identities=27%  Similarity=0.405  Sum_probs=81.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc-cchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ++.+++++|||+++|||++++++|+++|++|++++|+ .+..++..++++..+       .++.++.+|++ ++++++.+
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~   75 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADG-------GDAAFFAADLA-TSEACQQL   75 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTT-------CEEEEEECCTT-SHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcC-------CceEEEECCCC-CHHHHHHH
Confidence            4578999999999999999999999999999999998 777777777776432       46889999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCcc
Q 033624           93 VQKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~  112 (115)
                      ++++.+.++++|+||||||+
T Consensus        76 ~~~~~~~~g~id~vi~~Ag~   95 (258)
T 3afn_B           76 VDEFVAKFGGIDVLINNAGG   95 (258)
T ss_dssp             HHHHHHHHSSCSEEEECCCC
T ss_pred             HHHHHHHcCCCCEEEECCCC
Confidence            99999999999999999997

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.81  E-value=6.2e-20  Score=121.51  Aligned_cols=95  Identities=29%  Similarity=0.363  Sum_probs=81.0

Q ss_pred             CCCCCcEEEEecCC--ChHHHHHHHHHHHhCCeEEEEecccchH-HHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHH
Q 033624           13 HDLNEKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRL-KSLCDEINKPGMVGSPDSVRAVAVELDVCADGATI   89 (115)
Q Consensus        13 ~~~~~~~~lvtG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~   89 (115)
                      .++.+|+++|||++  +|||++++++|+++|++|++++|+.+.. ++..+++....      +.++.++.+|++ +++++
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~Dl~-~~~~v   88 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY------GIKAKAYKCQVD-SYESC   88 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHH------CCCEECCBCCTT-CHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhc------CCceeEEecCCC-CHHHH
Confidence            46789999999999  8999999999999999999999886654 55555554321      256889999996 89999


Q ss_pred             HHHHHHHHHHcCCccEEEeCCccCC
Q 033624           90 EISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        90 ~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +.+++++.+.++++|+||||||+..
T Consensus        89 ~~~~~~~~~~~g~id~li~nAg~~~  113 (267)
T 3gdg_A           89 EKLVKDVVADFGQIDAFIANAGATA  113 (267)
T ss_dssp             HHHHHHHHHHTSCCSEEEECCCCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCC
Confidence            9999999999999999999999864

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.81  E-value=2.2e-19  Score=122.52  Aligned_cols=93  Identities=28%  Similarity=0.355  Sum_probs=80.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEe-cccchHHHHHHHhh-CCCCCCCCCccceEEEEeecCCCHH----
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAA-RRVDRLKSLCDEIN-KPGMVGSPDSVRAVAVELDVCADGA----   87 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~di~~~~~----   87 (115)
                      .+.+++++|||+++|||++++++|+++|++|++++ |+.+.+++..+++. ..+       .++.++.+|++ +++    
T Consensus        43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~-------~~~~~~~~Dl~-d~~~~~~  114 (328)
T 2qhx_A           43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-------NSAITVQADLS-NVATAPV  114 (328)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-------TCEEEEECCCS-SSCBCC-
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcC-------CeEEEEEeeCC-Cchhccc
Confidence            36799999999999999999999999999999999 99888887777775 222       46888999996 777    


Q ss_pred             -------------HHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           88 -------------TIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        88 -------------~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                                   +++.+++++.+.++++|+||||||+..
T Consensus       115 ~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~  154 (328)
T 2qhx_A          115 SGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY  154 (328)
T ss_dssp             ------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             cccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence                         999999999999999999999999853

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.81  E-value=1.8e-20  Score=125.75  Aligned_cols=95  Identities=31%  Similarity=0.494  Sum_probs=83.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC---eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC---RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      .+.+|+++|||+++|||+++|++|+++|+   +|++++|+.+.+++..+++....     .+.++.++.+|++ ++++++
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~~Dv~-d~~~v~  103 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEF-----PNAKVHVAQLDIT-QAEKIK  103 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHC-----TTCEEEEEECCTT-CGGGHH
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhC-----CCCeEEEEECCCC-CHHHHH
Confidence            46799999999999999999999999998   99999999998888888876432     1257889999996 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccCC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      .+++++.+.++++|+||||||+..
T Consensus       104 ~~~~~~~~~~g~iD~lVnnAG~~~  127 (287)
T 3rku_A          104 PFIENLPQEFKDIDILVNNAGKAL  127 (287)
T ss_dssp             HHHHTSCGGGCSCCEEEECCCCCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCcCC
Confidence            999999999999999999999753

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.81  E-value=4.1e-19  Score=117.08  Aligned_cols=93  Identities=38%  Similarity=0.600  Sum_probs=81.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEec-ccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ++.+++++|||+++|||++++++|+++|++|++++| +.+..++..+.++..+       .++.++.+|++ ++++++.+
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-------~~~~~~~~D~~-~~~~~~~~   75 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG-------GEAIAVKGDVT-VESDVINL   75 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------CEEEEEECCTT-SHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcC-------CceEEEECCCC-CHHHHHHH
Confidence            467899999999999999999999999999999999 7777777777665432       46788999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+.++++|+||||||+..
T Consensus        76 ~~~~~~~~g~id~li~~Ag~~~   97 (261)
T 1gee_A           76 VQSAIKEFGKLDVMINNAGLEN   97 (261)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCCCC
Confidence            9999999999999999999753

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.81  E-value=4.5e-19  Score=119.24  Aligned_cols=94  Identities=19%  Similarity=0.184  Sum_probs=76.6

Q ss_pred             CCCCCCcEEEEecCC--ChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHH
Q 033624           12 WHDLNEKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATI   89 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~   89 (115)
                      +..+.+|+++|||++  +|||+++|++|+++|++|++++|+....+...+.....        .++.++.+|++ +++++
T Consensus        26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~Dv~-d~~~v   96 (293)
T 3grk_A           26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEEL--------GAFVAGHCDVA-DAASI   96 (293)
T ss_dssp             -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHH--------TCEEEEECCTT-CHHHH
T ss_pred             cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--------CCceEEECCCC-CHHHH
Confidence            446789999999999  55999999999999999999999854333333222211        35788999996 89999


Q ss_pred             HHHHHHHHHHcCCccEEEeCCccCC
Q 033624           90 EISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        90 ~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +.+++++.+.++++|+||||||+..
T Consensus        97 ~~~~~~~~~~~g~iD~lVnnAG~~~  121 (293)
T 3grk_A           97 DAVFETLEKKWGKLDFLVHAIGFSD  121 (293)
T ss_dssp             HHHHHHHHHHTSCCSEEEECCCCCC
T ss_pred             HHHHHHHHHhcCCCCEEEECCccCC
Confidence            9999999999999999999999863

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.81  E-value=4.9e-19  Score=116.17  Aligned_cols=93  Identities=33%  Similarity=0.529  Sum_probs=82.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+++++|||+++|||++++++|+++|++|++++|+.+..+...++++..+       .++.++.+|++ ++++++.++
T Consensus         8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~~   79 (255)
T 1fmc_A            8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG-------GQAFACRCDIT-SEQELSALA   79 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTT-CHHHHHHHH
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhC-------CceEEEEcCCC-CHHHHHHHH
Confidence            4678999999999999999999999999999999999888777777776433       46788999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+.++++|+||||||+..
T Consensus        80 ~~~~~~~~~~d~vi~~Ag~~~  100 (255)
T 1fmc_A           80 DFAISKLGKVDILVNNAGGGG  100 (255)
T ss_dssp             HHHHHHHSSCCEEEECCCCCC
T ss_pred             HHHHHhcCCCCEEEECCCCCC
Confidence            999999999999999999753

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.81  E-value=5.9e-19  Score=116.79  Aligned_cols=95  Identities=15%  Similarity=0.145  Sum_probs=78.3

Q ss_pred             CCCCCCCcEEEEecCC--ChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHH
Q 033624           11 PWHDLNEKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGAT   88 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~   88 (115)
                      +...+.+|+++|||++  +|||++++++|+++|++|++++|+....+...+..+..        .++.++.+|++ ++++
T Consensus         8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~Dv~-~~~~   78 (271)
T 3ek2_A            8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF--------GSELVFPCDVA-DDAQ   78 (271)
T ss_dssp             -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT--------TCCCEEECCTT-CHHH
T ss_pred             CccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHc--------CCcEEEECCCC-CHHH
Confidence            3456789999999998  99999999999999999999999855444333322222        24778999996 8999


Q ss_pred             HHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           89 IEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        89 ~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++.+++++.+.++++|+||||||+..
T Consensus        79 v~~~~~~~~~~~g~id~lv~nAg~~~  104 (271)
T 3ek2_A           79 IDALFASLKTHWDSLDGLVHSIGFAP  104 (271)
T ss_dssp             HHHHHHHHHHHCSCEEEEEECCCCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCccCc
Confidence            99999999999999999999999863

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.81  E-value=8.5e-19  Score=114.88  Aligned_cols=91  Identities=26%  Similarity=0.416  Sum_probs=80.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+++++|||+++|||++++++|+++|++|++++|+.+..++..+.+...        .++.++.+|++ ++++++.++
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~D~~-~~~~~~~~~   73 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP--------DQIQFFQHDSS-DEDGWTKLF   73 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT--------TTEEEEECCTT-CHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc--------CceEEEECCCC-CHHHHHHHH
Confidence            467899999999999999999999999999999999988777777666432        36788999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|+||||||+.
T Consensus        74 ~~~~~~~~~id~li~~Ag~~   93 (251)
T 1zk4_A           74 DATEKAFGPVSTLVNNAGIA   93 (251)
T ss_dssp             HHHHHHHSSCCEEEECCCCC
T ss_pred             HHHHHHhCCCCEEEECCCCC
Confidence            99999999999999999975

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.81  E-value=9.9e-19  Score=115.38  Aligned_cols=90  Identities=27%  Similarity=0.328  Sum_probs=80.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .++.+++++|||+++|||++++++|+++|++|++++|+.+..++..+++.          .++.++.+|++ ++++++.+
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~-~~~~v~~~   76 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG----------NNCVFAPADVT-SEKDVQTA   76 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC----------TTEEEEECCTT-CHHHHHHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhC----------CceEEEEcCCC-CHHHHHHH
Confidence            35679999999999999999999999999999999999888877776662          36788999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|+||||||+.
T Consensus        77 ~~~~~~~~g~id~li~~Ag~~   97 (265)
T 2o23_A           77 LALAKGKFGRVDVAVNCAGIA   97 (265)
T ss_dssp             HHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHCCCCCEEEECCccC
Confidence            999999999999999999975

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.81  E-value=9.9e-19  Score=117.55  Aligned_cols=98  Identities=28%  Similarity=0.521  Sum_probs=83.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+.+++++|||+++|||++++++|+++|++|++++|+.+..+...+++.....  ...+.++.++.+|++ ++++++.+
T Consensus        14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~D~~-~~~~v~~~   90 (303)
T 1yxm_A           14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLP--PTKQARVIPIQCNIR-NEEEVNNL   90 (303)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSC--TTCCCCEEEEECCTT-CHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcc--ccCCccEEEEecCCC-CHHHHHHH
Confidence            457799999999999999999999999999999999998888877777754210  001246889999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|+||||||+.
T Consensus        91 ~~~~~~~~g~id~li~~Ag~~  111 (303)
T 1yxm_A           91 VKSTLDTFGKINFLVNNGGGQ  111 (303)
T ss_dssp             HHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCCC
Confidence            999999999999999999964

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.81  E-value=6.4e-19  Score=116.51  Aligned_cols=94  Identities=28%  Similarity=0.367  Sum_probs=82.1

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ...+.+++++|||+++|||++++++|+++|++|++++|+.+..++..+.++..+       .++.++.+|++ ++++++.
T Consensus         9 ~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~   80 (266)
T 1xq1_A            9 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG-------FQVTGSVCDAS-LRPEREK   80 (266)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTT-SHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CeeEEEECCCC-CHHHHHH
Confidence            345789999999999999999999999999999999999888877777776432       46788999996 8999999


Q ss_pred             HHHHHHHHc-CCccEEEeCCccC
Q 033624           92 SVQKAWEAF-GRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~-~~id~li~naG~~  113 (115)
                      +++++.+.+ +++|+||||||+.
T Consensus        81 ~~~~~~~~~~~~id~li~~Ag~~  103 (266)
T 1xq1_A           81 LMQTVSSMFGGKLDILINNLGAI  103 (266)
T ss_dssp             HHHHHHHHHTTCCSEEEEECCC-
T ss_pred             HHHHHHHHhCCCCcEEEECCCCC
Confidence            999999888 8999999999975

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.80  E-value=1e-18  Score=115.25  Aligned_cols=87  Identities=32%  Similarity=0.431  Sum_probs=76.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+|+++|||+++|||++++++|+++|++|++++|+.+. ++..+.+.           + .++.+|++ ++++++.++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~-----------~-~~~~~D~~-~~~~~~~~~   68 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG-----------G-AFFQVDLE-DERERVRFV   68 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT-----------C-EEEECCTT-CHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh-----------C-CEEEeeCC-CHHHHHHHH
Confidence            4678999999999999999999999999999999999876 55555542           3 67889996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+.++++|+||||||+..
T Consensus        69 ~~~~~~~g~iD~lv~~Ag~~~   89 (256)
T 2d1y_A           69 EEAAYALGRVDVLVNNAAIAA   89 (256)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCCC
Confidence            999999999999999999753

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.80  E-value=7e-19  Score=115.46  Aligned_cols=87  Identities=36%  Similarity=0.543  Sum_probs=75.8

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +.+++++|||+++|||++++++|+++|++|++++|+.+.+++..+.+            .+.++.+|++ ++++++.+++
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------------~~~~~~~D~~-~~~~~~~~~~   69 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV------------GAHPVVMDVA-DPASVERGFA   69 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT------------TCEEEECCTT-CHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc------------CCEEEEecCC-CHHHHHHHHH
Confidence            57899999999999999999999999999999999987666544322            1567889996 8999999999


Q ss_pred             HHHHHcCCccEEEeCCccCC
Q 033624           95 KAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~~  114 (115)
                      ++.+.++++|+||||||+..
T Consensus        70 ~~~~~~g~id~lvn~Ag~~~   89 (245)
T 1uls_A           70 EALAHLGRLDGVVHYAGITR   89 (245)
T ss_dssp             HHHHHHSSCCEEEECCCCCC
T ss_pred             HHHHHcCCCCEEEECCCCCC
Confidence            99999999999999999753

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.80  E-value=6.8e-19  Score=116.30  Aligned_cols=93  Identities=28%  Similarity=0.373  Sum_probs=79.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+|+++|||+++|||++++++|+++|++|++++|+.+..++..+++....     ...++.++.+|++ ++++++.++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~-~~~~v~~~~   77 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLV-----SGAQVDIVAGDIR-EPGDIDRLF   77 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS-----TTCCEEEEECCTT-CHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-----CCCeEEEEEccCC-CHHHHHHHH
Confidence            3678999999999999999999999999999999999888777777665210     0126788999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++ +|+||||||+.
T Consensus        78 ~~~~~~~g-id~lv~~Ag~~   96 (260)
T 2z1n_A           78 EKARDLGG-ADILVYSTGGP   96 (260)
T ss_dssp             HHHHHTTC-CSEEEECCCCC
T ss_pred             HHHHHhcC-CCEEEECCCCC
Confidence            99999998 99999999975

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.80  E-value=6.8e-19  Score=116.11  Aligned_cols=100  Identities=25%  Similarity=0.380  Sum_probs=79.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+++++|||+++|||++++++|+++|++|++++|+.+..++..+.+...+........++.++.+|++ ++++++.++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~   82 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVS-EARAARCLL   82 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTT-SHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCC-CHHHHHHHH
Confidence            4678999999999999999999999999999999999887777666554322100011145788999996 899999999


Q ss_pred             HHHHHHcCCc-cEEEeCCccCC
Q 033624           94 QKAWEAFGRV-DALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~i-d~li~naG~~~  114 (115)
                      +.+.+.++++ |+||||||+..
T Consensus        83 ~~~~~~~g~i~d~vi~~Ag~~~  104 (264)
T 2pd6_A           83 EQVQACFSRPPSVVVSCAGITQ  104 (264)
T ss_dssp             HHHHHHHSSCCSEEEECCCCCC
T ss_pred             HHHHHHhCCCCeEEEECCCcCC
Confidence            9999999999 99999999753

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.80  E-value=1.4e-18  Score=115.07  Aligned_cols=94  Identities=17%  Similarity=0.239  Sum_probs=79.6

Q ss_pred             CCCCcEEEEecCC--ChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           14 DLNEKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        14 ~~~~~~~lvtG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ++.+|+++|||++  +|||++++++|+++|++|++++|+....+...+..+..+      ..++.++.+|++ ++++++.
T Consensus         4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~D~~-~~~~v~~   76 (266)
T 3oig_A            4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLD------RNDSIILPCDVT-NDAEIET   76 (266)
T ss_dssp             CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSS------SCCCEEEECCCS-SSHHHHH
T ss_pred             ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcC------CCCceEEeCCCC-CHHHHHH
Confidence            5779999999999  669999999999999999999998765555555444332      236889999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++++.+.++++|+||||||+..
T Consensus        77 ~~~~~~~~~g~id~li~~Ag~~~   99 (266)
T 3oig_A           77 CFASIKEQVGVIHGIAHCIAFAN   99 (266)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHhCCeeEEEEcccccc
Confidence            99999999999999999999863

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.80  E-value=1.2e-18  Score=114.10  Aligned_cols=91  Identities=32%  Similarity=0.464  Sum_probs=79.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +++++|||+++|||++++++|+++|++|++++|+.+..++..+.+....      +.++.++.+|++ ++++++.+++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~D~~-~~~~~~~~~~~~   74 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY------ADKVLRVRADVA-DEGDVNAAIAAT   74 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTT------GGGEEEEECCTT-CHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc------CCcEEEEEecCC-CHHHHHHHHHHH
Confidence            6899999999999999999999999999999999888877777762211      246889999996 899999999999


Q ss_pred             HHHcCCccEEEeCCccCC
Q 033624           97 WEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        97 ~~~~~~id~li~naG~~~  114 (115)
                      .+.++++|+||||||+..
T Consensus        75 ~~~~~~id~li~~Ag~~~   92 (250)
T 2cfc_A           75 MEQFGAIDVLVNNAGITG   92 (250)
T ss_dssp             HHHHSCCCEEEECCCCCC
T ss_pred             HHHhCCCCEEEECCCCCC
Confidence            999999999999999753

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.80  E-value=5.6e-19  Score=117.94  Aligned_cols=93  Identities=14%  Similarity=0.152  Sum_probs=77.5

Q ss_pred             CCCCCCcEEEEecCC--ChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHH
Q 033624           12 WHDLNEKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATI   89 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~   89 (115)
                      |..+.+|+++|||++  +|||+++|++|+++|++|++++|+.  ..+..+.+....       .++.++.+|++ +++++
T Consensus        21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~-------~~~~~~~~Dl~-~~~~v   90 (280)
T 3nrc_A           21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEF-------NPAAVLPCDVI-SDQEI   90 (280)
T ss_dssp             -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGG-------CCSEEEECCTT-CHHHH
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhc-------CCceEEEeecC-CHHHH
Confidence            456789999999988  7799999999999999999999987  233344443322       34788999996 89999


Q ss_pred             HHHHHHHHHHcCCccEEEeCCccCC
Q 033624           90 EISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        90 ~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +.+++++.+.++++|+||||||+..
T Consensus        91 ~~~~~~~~~~~g~id~li~nAg~~~  115 (280)
T 3nrc_A           91 KDLFVELGKVWDGLDAIVHSIAFAP  115 (280)
T ss_dssp             HHHHHHHHHHCSSCCEEEECCCCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCccCC
Confidence            9999999999999999999999863

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.80  E-value=6.4e-19  Score=117.26  Aligned_cols=94  Identities=26%  Similarity=0.343  Sum_probs=81.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .++.+++++|||+++|||++++++|+++|++|++++|+.+..+...+.++..+       .++.++.+|++ ++++++.+
T Consensus        30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~-~~~~~~~~  101 (279)
T 3ctm_A           30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYG-------VHSKAYKCNIS-DPKSVEET  101 (279)
T ss_dssp             GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHC-------SCEEEEECCTT-CHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CcceEEEeecC-CHHHHHHH
Confidence            35789999999999999999999999999999999999887776666654322       46788999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+.++++|+||||||+..
T Consensus       102 ~~~~~~~~g~id~li~~Ag~~~  123 (279)
T 3ctm_A          102 ISQQEKDFGTIDVFVANAGVTW  123 (279)
T ss_dssp             HHHHHHHHSCCSEEEECGGGST
T ss_pred             HHHHHHHhCCCCEEEECCcccc
Confidence            9999999999999999999753

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.80  E-value=2.7e-19  Score=118.91  Aligned_cols=87  Identities=36%  Similarity=0.575  Sum_probs=74.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+|+++|||+++|||++++++|+++|++|++++|+.+.+++    +.         ..++.++.+|++ ++++++.++
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~----~~---------~~~~~~~~~Dv~-d~~~v~~~~   78 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKA----LN---------LPNTLCAQVDVT-DKYTFDTAI   78 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHT----TC---------CTTEEEEECCTT-CHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH----hh---------cCCceEEEecCC-CHHHHHHHH
Confidence            4678999999999999999999999999999999998765432    11         125788999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+.++++|+||||||+..
T Consensus        79 ~~~~~~~g~iD~lvnnAg~~~   99 (266)
T 3p19_A           79 TRAEKIYGPADAIVNNAGMML   99 (266)
T ss_dssp             HHHHHHHCSEEEEEECCCCCC
T ss_pred             HHHHHHCCCCCEEEECCCcCC
Confidence            999999999999999999853

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.80  E-value=8.1e-19  Score=115.94  Aligned_cols=91  Identities=30%  Similarity=0.408  Sum_probs=80.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHH-hCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAK-AGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      .+++++|||+++|||++++++|++ .|++|++++|+.+..++..+.++..+       .++.++.+|++ +.++++.+++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dl~-~~~~~~~~~~   74 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG-------LSPRFHQLDID-DLQSIRALRD   74 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT-------CCCEEEECCTT-CHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC-------CeeEEEECCCC-CHHHHHHHHH
Confidence            578999999999999999999999 89999999999888887777776432       46788999996 8999999999


Q ss_pred             HHHHHcCCccEEEeCCccCC
Q 033624           95 KAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~~  114 (115)
                      ++.+.++++|+||||||+..
T Consensus        75 ~~~~~~g~id~li~~Ag~~~   94 (276)
T 1wma_A           75 FLRKEYGGLDVLVNNAGIAF   94 (276)
T ss_dssp             HHHHHHSSEEEEEECCCCCC
T ss_pred             HHHHhcCCCCEEEECCcccc
Confidence            99999999999999999753

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.80  E-value=6.1e-19  Score=117.63  Aligned_cols=89  Identities=25%  Similarity=0.375  Sum_probs=79.4

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      +.++.+|+++|||+++|||++++++|+++|++|++++|+.+..++..+++.          .++.++.+|++ +.++++.
T Consensus        25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~----------~~~~~~~~Dl~-~~~~v~~   93 (281)
T 3ppi_A           25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELG----------NRAEFVSTNVT-SEDSVLA   93 (281)
T ss_dssp             CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----------TTEEEEECCTT-CHHHHHH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC----------CceEEEEcCCC-CHHHHHH
Confidence            456789999999999999999999999999999999999988888777762          46889999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeC-Ccc
Q 033624           92 SVQKAWEAFGRVDALVNN-AGI  112 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~n-aG~  112 (115)
                      +++++ ..++++|++||| ||+
T Consensus        94 ~~~~~-~~~~~id~lv~~aag~  114 (281)
T 3ppi_A           94 AIEAA-NQLGRLRYAVVAHGGF  114 (281)
T ss_dssp             HHHHH-TTSSEEEEEEECCCCC
T ss_pred             HHHHH-HHhCCCCeEEEccCcc
Confidence            99998 888999999999 554

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.80  E-value=1e-18  Score=114.23  Aligned_cols=91  Identities=37%  Similarity=0.584  Sum_probs=77.3

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEE-ecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      +.+++++|||+++|||++++++|+++|++|+++ .|+.+..++..+.++..+       .++.++.+|++ ++++++.++
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~~   74 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAG-------INVVVAKGDVK-NPEDVENMV   74 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTT-------CCEEEEESCTT-SHHHHHHHH
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcC-------CcEEEEECCCC-CHHHHHHHH
Confidence            568999999999999999999999999999998 677777777777665432       46889999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|+||||||+.
T Consensus        75 ~~~~~~~~~~d~vi~~Ag~~   94 (247)
T 2hq1_A           75 KTAMDAFGRIDILVNNAGIT   94 (247)
T ss_dssp             HHHHHHHSCCCEEEECC---
T ss_pred             HHHHHhcCCCCEEEECCCCC
Confidence            99999999999999999975

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.80  E-value=6.4e-19  Score=120.07  Aligned_cols=91  Identities=31%  Similarity=0.492  Sum_probs=75.7

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc-----cchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-----VDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATI   89 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~   89 (115)
                      +.+|+++|||+++|||++++++|+++|++|++++|+     .+..+.+.+.+...+       .++..+.+|++ +++++
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~-------~~~~~~~~Dvt-d~~~v   74 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDND-------VDLRTLELDVQ-SQVSV   74 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHT-------CCEEEEECCTT-CHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcC-------CcEEEEEeecC-CHHHH
Confidence            468999999999999999999999999999988775     344455555444322       46889999996 89999


Q ss_pred             HHHHHHHHHHcCCccEEEeCCccC
Q 033624           90 EISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        90 ~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      +.+++++.+.++++|+||||||+.
T Consensus        75 ~~~~~~~~~~~g~iD~lVnnAG~~   98 (324)
T 3u9l_A           75 DRAIDQIIGEDGRIDVLIHNAGHM   98 (324)
T ss_dssp             HHHHHHHHHHHSCCSEEEECCCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcC
Confidence            999999999999999999999975

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.80  E-value=1.2e-18  Score=113.99  Aligned_cols=94  Identities=32%  Similarity=0.528  Sum_probs=81.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+++++|||+++|||++++++|+++|++|++++|+.+..+...+.+....      +.++.++.+|++ ++++++.++
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~D~~-~~~~~~~~~   76 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY------GVKAHGVEMNLL-SEESINKAF   76 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH------CCCEEEEECCTT-CHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhc------CCceEEEEccCC-CHHHHHHHH
Confidence            4678999999999999999999999999999999999887777666664310      146788999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+.++++|+||||||+..
T Consensus        77 ~~~~~~~~~~d~vi~~Ag~~~   97 (248)
T 2pnf_A           77 EEIYNLVDGIDILVNNAGITR   97 (248)
T ss_dssp             HHHHHHSSCCSEEEECCCCCC
T ss_pred             HHHHHhcCCCCEEEECCCCCC
Confidence            999999999999999999753

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.80  E-value=2.6e-18  Score=112.73  Aligned_cols=90  Identities=30%  Similarity=0.467  Sum_probs=78.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccce-EEEEeecCCCHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRA-VAVELDVCADGATIEI   91 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~di~~~~~~~~~   91 (115)
                      .++.+++++|||+++|||++++++|+++|++|++++|+.+..++..+++.          .++ .++.+|++ ++++++.
T Consensus         7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~~D~~-~~~~~~~   75 (254)
T 2wsb_A            7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG----------AAVAARIVADVT-DAEAMTA   75 (254)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----------GGEEEEEECCTT-CHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----------ccceeEEEEecC-CHHHHHH
Confidence            35779999999999999999999999999999999999887777666652          345 78899996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++++.+ ++++|+||||||+..
T Consensus        76 ~~~~~~~-~~~id~li~~Ag~~~   97 (254)
T 2wsb_A           76 AAAEAEA-VAPVSILVNSAGIAR   97 (254)
T ss_dssp             HHHHHHH-HSCCCEEEECCCCCC
T ss_pred             HHHHHHh-hCCCcEEEECCccCC
Confidence            9999888 899999999999753

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.80  E-value=7.1e-19  Score=116.09  Aligned_cols=94  Identities=27%  Similarity=0.379  Sum_probs=81.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHH---hCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAK---AGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~---~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      .+.+|+++|||+++|||++++++|++   +|++|++++|+.+..++..+++....     .+.++.++.+|++ ++++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~~Dv~-~~~~v~   76 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQ-----PDLKVVLAAADLG-TEAGVQ   76 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHC-----TTSEEEEEECCTT-SHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhC-----CCCeEEEEecCCC-CHHHHH
Confidence            46789999999999999999999999   89999999999888887777775421     1246889999996 899999


Q ss_pred             HHHHHHHH--HcCCcc--EEEeCCccC
Q 033624           91 ISVQKAWE--AFGRVD--ALVNNAGIR  113 (115)
Q Consensus        91 ~~~~~~~~--~~~~id--~li~naG~~  113 (115)
                      .+++++.+  .++++|  +||||||+.
T Consensus        77 ~~~~~~~~~~~~g~~d~~~lvnnAg~~  103 (259)
T 1oaa_A           77 RLLSAVRELPRPEGLQRLLLINNAATL  103 (259)
T ss_dssp             HHHHHHHHSCCCTTCCEEEEEECCCCC
T ss_pred             HHHHHHHhccccccCCccEEEECCccc
Confidence            99999988  678899  999999985

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.79  E-value=1.1e-18  Score=116.39  Aligned_cols=88  Identities=42%  Similarity=0.605  Sum_probs=78.3

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +.+++++|||+++|||++++++|+++|++|++++|+.+..++..+.+.          .++.++.+|++ ++++++.+++
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dv~-~~~~~~~~~~   71 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYP----------DRAEAISLDVT-DGERIDVVAA   71 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCT----------TTEEEEECCTT-CHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc----------CCceEEEeeCC-CHHHHHHHHH
Confidence            458999999999999999999999999999999999888777665542          46889999996 8999999999


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                      ++.+.++++|+||||||+.
T Consensus        72 ~~~~~~g~id~lv~~Ag~~   90 (281)
T 3m1a_A           72 DVLARYGRVDVLVNNAGRT   90 (281)
T ss_dssp             HHHHHHSCCSEEEECCCCE
T ss_pred             HHHHhCCCCCEEEECCCcC
Confidence            9999999999999999974

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.79  E-value=1.3e-18  Score=115.23  Aligned_cols=94  Identities=27%  Similarity=0.483  Sum_probs=81.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEec-ccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ..+.+++++|||+++|||++++++|+++|++|++++| +.+..++..++++..+       .++.++.+|++ ++++++.
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~-------~~~~~~~~D~~-~~~~~~~   88 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG-------AQGVAIQADIS-KPSEVVA   88 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------CCEEEEECCTT-SHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC-------CcEEEEEecCC-CHHHHHH
Confidence            4577999999999999999999999999999999999 6666776667665432       46788999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++++...++++|+||||||+..
T Consensus        89 ~~~~~~~~~~~~d~vi~~Ag~~~  111 (274)
T 1ja9_A           89 LFDKAVSHFGGLDFVMSNSGMEV  111 (274)
T ss_dssp             HHHHHHHHHSCEEEEECCCCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCC
Confidence            99999999999999999999753

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.79  E-value=2e-18  Score=112.73  Aligned_cols=89  Identities=29%  Similarity=0.520  Sum_probs=80.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCC-------eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGC-------RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATI   89 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~-------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~   89 (115)
                      +++++|||+++|||++++++|+++|+       +|++++|+.+..+...++++..+       .++.++.+|++ +++++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~v   73 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG-------ALTDTITADIS-DMADV   73 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT-------CEEEEEECCTT-SHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccC-------CeeeEEEecCC-CHHHH
Confidence            68999999999999999999999999       89999999888887777776432       46889999996 89999


Q ss_pred             HHHHHHHHHHcCCccEEEeCCccC
Q 033624           90 EISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        90 ~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      +.+++++.+.++++|+||||||+.
T Consensus        74 ~~~~~~~~~~~g~id~li~~Ag~~   97 (244)
T 2bd0_A           74 RRLTTHIVERYGHIDCLVNNAGVG   97 (244)
T ss_dssp             HHHHHHHHHHTSCCSEEEECCCCC
T ss_pred             HHHHHHHHHhCCCCCEEEEcCCcC
Confidence            999999999999999999999975

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.79  E-value=7.6e-19  Score=116.97  Aligned_cols=92  Identities=14%  Similarity=0.153  Sum_probs=76.6

Q ss_pred             CCCCcEEEEecCC--ChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           14 DLNEKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        14 ~~~~~~~lvtG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ++.+|+++|||++  +|||+++++.|+++|++|++++|+.+ .++..+++....       ..+.++.+|++ ++++++.
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~-------~~~~~~~~D~~-~~~~v~~   73 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQEL-------NSPYVYELDVS-KEEHFKS   73 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHT-------TCCCEEECCTT-CHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhc-------CCcEEEEcCCC-CHHHHHH
Confidence            4678999999999  99999999999999999999999876 333444443221       13678899996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++++.+.++++|+||||||+..
T Consensus        74 ~~~~~~~~~g~id~lv~nAg~~~   96 (275)
T 2pd4_A           74 LYNSVKKDLGSLDFIVHSVAFAP   96 (275)
T ss_dssp             HHHHHHHHTSCEEEEEECCCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCccCc
Confidence            99999999999999999999853

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.79  E-value=7.8e-19  Score=115.78  Aligned_cols=95  Identities=23%  Similarity=0.389  Sum_probs=79.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+.+++++|||+++|||++++++|+++|++|++++|+.+......+.+....      +.++.++.+|++ ++++++.+
T Consensus        10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~~Dl~-~~~~~~~~   82 (265)
T 1h5q_A           10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF------GVKTKAYQCDVS-NTDIVTKT   82 (265)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH------TCCEEEEECCTT-CHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhc------CCeeEEEEeeCC-CHHHHHHH
Confidence            34679999999999999999999999999999999998766655555553211      146788999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+.++++|+||||||+..
T Consensus        83 ~~~~~~~~~~id~li~~Ag~~~  104 (265)
T 1h5q_A           83 IQQIDADLGPISGLIANAGVSV  104 (265)
T ss_dssp             HHHHHHHSCSEEEEEECCCCCC
T ss_pred             HHHHHHhcCCCCEEEECCCcCC
Confidence            9999999999999999999753

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.79  E-value=1.7e-18  Score=114.14  Aligned_cols=86  Identities=30%  Similarity=0.411  Sum_probs=77.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhC--CeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +|+++|||+++|||++++++|+++|  +.|++++|+.+.++++.+.+.          .++.++.+|++ ++++++.+++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dv~-~~~~v~~~~~   70 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYG----------DRFFYVVGDIT-EDSVLKQLVN   70 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHG----------GGEEEEESCTT-SHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhC----------CceEEEECCCC-CHHHHHHHHH
Confidence            7899999999999999999999985  688889999888877776652          46889999996 8999999999


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                      ++.+.++++|+||||||+.
T Consensus        71 ~~~~~~g~id~lvnnAg~~   89 (254)
T 3kzv_A           71 AAVKGHGKIDSLVANAGVL   89 (254)
T ss_dssp             HHHHHHSCCCEEEEECCCC
T ss_pred             HHHHhcCCccEEEECCccc
Confidence            9999999999999999985

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.79  E-value=8.2e-19  Score=116.67  Aligned_cols=86  Identities=30%  Similarity=0.473  Sum_probs=73.2

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      +...+.+|+++|||+++|||++++++|+++|++|++++|+.+...                 .....+.+|++ ++++++
T Consensus         8 ~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-----------------~~~~~~~~Dv~-~~~~v~   69 (269)
T 3vtz_A            8 HMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV-----------------NVSDHFKIDVT-NEEEVK   69 (269)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT-----------------TSSEEEECCTT-CHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc-----------------CceeEEEecCC-CHHHHH
Confidence            345678999999999999999999999999999999998865320                 24567889996 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccCC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      .+++++.+.++++|+||||||+..
T Consensus        70 ~~~~~~~~~~g~iD~lv~nAg~~~   93 (269)
T 3vtz_A           70 EAVEKTTKKYGRIDILVNNAGIEQ   93 (269)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCC
Confidence            999999999999999999999853

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.79  E-value=6.4e-19  Score=118.14  Aligned_cols=89  Identities=27%  Similarity=0.410  Sum_probs=76.0

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      ++.++.+|+++|||+++|||++++++|+++|++|++++|+.+..++..+.+          ..++.++.+|++ ++++++
T Consensus        10 ~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dl~-d~~~v~   78 (291)
T 3rd5_A           10 DLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM----------AGQVEVRELDLQ-DLSSVR   78 (291)
T ss_dssp             GCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS----------SSEEEEEECCTT-CHHHHH
T ss_pred             hccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------cCCeeEEEcCCC-CHHHHH
Confidence            345688999999999999999999999999999999999988777665544          247889999996 888888


Q ss_pred             HHHHHHHHHcCCccEEEeCCccCC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      .+++++    +++|+||||||+..
T Consensus        79 ~~~~~~----~~iD~lv~nAg~~~   98 (291)
T 3rd5_A           79 RFADGV----SGADVLINNAGIMA   98 (291)
T ss_dssp             HHHHTC----CCEEEEEECCCCCS
T ss_pred             HHHHhc----CCCCEEEECCcCCC
Confidence            877765    78999999999854

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.79  E-value=6.5e-19  Score=117.40  Aligned_cols=91  Identities=33%  Similarity=0.573  Sum_probs=78.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+. |+++|||+++|||++++++|+++|++|++++|+.+.+++..+++...        .++.++.+|++ ++++++.+
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~Dv~-d~~~v~~~   87 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK--------TRVLPLTLDVR-DRAAMSAA   87 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT--------SCEEEEECCTT-CHHHHHHH
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC--------CcEEEEEcCCC-CHHHHHHH
Confidence            3455 89999999999999999999999999999999988888777777531        35788999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+.++++|+||||||+.
T Consensus        88 ~~~~~~~~g~iD~lvnnAG~~  108 (272)
T 2nwq_A           88 VDNLPEEFATLRGLINNAGLA  108 (272)
T ss_dssp             HHTCCGGGSSCCEEEECCCCC
T ss_pred             HHHHHHHhCCCCEEEECCCCC
Confidence            999989999999999999985

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.79  E-value=2.4e-19  Score=118.71  Aligned_cols=85  Identities=33%  Similarity=0.457  Sum_probs=74.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+.+|+++|||+++|||++++++|+++|++|++++|+.+...                ..++.++.+|++ ++++++.+
T Consensus        24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----------------~~~~~~~~~Dv~-d~~~v~~~   86 (260)
T 3un1_A           24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA----------------DPDIHTVAGDIS-KPETADRI   86 (260)
T ss_dssp             HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS----------------STTEEEEESCTT-SHHHHHHH
T ss_pred             hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc----------------cCceEEEEccCC-CHHHHHHH
Confidence            4567999999999999999999999999999999999865321                136789999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+.++++|+||||||+..
T Consensus        87 ~~~~~~~~g~iD~lv~nAg~~~  108 (260)
T 3un1_A           87 VREGIERFGRIDSLVNNAGVFL  108 (260)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHCCCCCEEEECCCCCC
Confidence            9999999999999999999853

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.78  E-value=2.1e-18  Score=115.30  Aligned_cols=93  Identities=32%  Similarity=0.384  Sum_probs=80.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+++++|||+++|||++++++|+++|++|++++|+.+.++...+++...+      ..++.++.+|++ +.++++.++
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~Dl~-d~~~v~~~~   97 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG------AASAHYIAGTME-DMTFAEQFV   97 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT------CSEEEEEECCTT-CHHHHHHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC------CCceEEEeCCCC-CHHHHHHHH
Confidence            4679999999999999999999999999999999999988877777665432      136788999996 899999999


Q ss_pred             HHHHHHcCCccEEEeC-CccC
Q 033624           94 QKAWEAFGRVDALVNN-AGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~n-aG~~  113 (115)
                      +++.+.++++|+|||| +|+.
T Consensus        98 ~~~~~~~g~iD~li~naag~~  118 (286)
T 1xu9_A           98 AQAGKLMGGLDMLILNHITNT  118 (286)
T ss_dssp             HHHHHHHTSCSEEEECCCCCC
T ss_pred             HHHHHHcCCCCEEEECCccCC
Confidence            9999999999999999 6754

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.78  E-value=2e-18  Score=112.68  Aligned_cols=90  Identities=38%  Similarity=0.629  Sum_probs=77.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEE-ecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      +++++|||+++|||++++++|+++|++|+++ +|+.+..+...+.++..+       .++.++.+|++ ++++++.++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~~~~   72 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYG-------GQAITFGGDVS-KEADVEAMMKT   72 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHT-------CEEEEEECCTT-SHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-------CcEEEEeCCCC-CHHHHHHHHHH
Confidence            5789999999999999999999999999984 788777777666665432       46788999996 89999999999


Q ss_pred             HHHHcCCccEEEeCCccCC
Q 033624           96 AWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~~  114 (115)
                      +.+.++++|+||||||+..
T Consensus        73 ~~~~~g~id~li~~Ag~~~   91 (244)
T 1edo_A           73 AIDAWGTIDVVVNNAGITR   91 (244)
T ss_dssp             HHHHSSCCSEEEECCCCCC
T ss_pred             HHHHcCCCCEEEECCCCCC
Confidence            9999999999999999754

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.78  E-value=2.3e-18  Score=113.83  Aligned_cols=90  Identities=22%  Similarity=0.355  Sum_probs=75.6

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch-HHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-LKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      +.+|+++|||+++|||++++++|+++|++|++++|+.+. .+...+.++..       +.++.++.+|++ ++++++.++
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dl~-~~~~v~~~~   76 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV-------EERLQFVQADVT-KKEDLHKIV   76 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGG-------GGGEEEEECCTT-SHHHHHHHH
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-------CCceEEEEecCC-CHHHHHHHH
Confidence            457999999999999999999999999999999777554 34444444332       257899999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCcc
Q 033624           94 QKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~  112 (115)
                      +++.+.++++|+||||||+
T Consensus        77 ~~~~~~~g~id~lv~~Ag~   95 (264)
T 3i4f_A           77 EEAMSHFGKIDFLINNAGP   95 (264)
T ss_dssp             HHHHHHHSCCCEEECCCCC
T ss_pred             HHHHHHhCCCCEEEECCcc
Confidence            9999999999999999994

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.78  E-value=2.6e-18  Score=113.98  Aligned_cols=92  Identities=25%  Similarity=0.396  Sum_probs=77.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+.+|+++|||+++|||++++++|+++|++|++++|+.+..++..+++...+     ....+..+.+|++ +++.++.+
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~~D~~-~~~~~~~~   79 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQY-----PDAILQPVVADLG-TEQGCQDV   79 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHC-----TTCEEEEEECCTT-SHHHHHHH
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-----CCceEEEEecCCC-CHHHHHHH
Confidence            35789999999999999999999999999999999999988888888776532     1246788999996 77777665


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      +    ++++++|+||||||+..
T Consensus        80 ~----~~~g~id~lv~nAg~~~   97 (267)
T 3t4x_A           80 I----EKYPKVDILINNLGIFE   97 (267)
T ss_dssp             H----HHCCCCSEEEECCCCCC
T ss_pred             H----HhcCCCCEEEECCCCCC
Confidence            4    45789999999999864

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.78  E-value=2.3e-18  Score=115.13  Aligned_cols=91  Identities=19%  Similarity=0.210  Sum_probs=76.0

Q ss_pred             CCCCcEEEEecCC--ChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           14 DLNEKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        14 ~~~~~~~lvtG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .+.+++++|||++  +|||+++++.|+++|++|++++|+.+ .++..+.+....       ..+.++.+|++ ++++++.
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~-------~~~~~~~~Dl~-~~~~v~~   88 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGF-------GSDLVVKCDVS-LDEDIKN   88 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHT-------TCCCEEECCTT-CHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhc-------CCeEEEEcCCC-CHHHHHH
Confidence            3779999999998  99999999999999999999999875 333344443211       13568899996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++++.+.++++|+||||||+.
T Consensus        89 ~~~~~~~~~g~iD~lv~~Ag~~  110 (285)
T 2p91_A           89 LKKFLEENWGSLDIIVHSIAYA  110 (285)
T ss_dssp             HHHHHHHHTSCCCEEEECCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCCC
Confidence            9999999999999999999975

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.78  E-value=1.7e-18  Score=114.63  Aligned_cols=92  Identities=17%  Similarity=0.291  Sum_probs=75.7

Q ss_pred             CCCCcEEEEecCC--ChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           14 DLNEKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        14 ~~~~~~~lvtG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .+.+|+++|||++  +|||++++++|+++|++|++++|+. ..++..+++....       ....++.+|++ ++++++.
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~-------~~~~~~~~D~~-~~~~v~~   76 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQL-------GSDIVLQCDVA-EDASIDT   76 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHT-------TCCCEEECCTT-CHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhc-------CCcEEEEccCC-CHHHHHH
Confidence            3678999999999  9999999999999999999999987 3334444443221       12367899996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++++.+.++++|+||||||+..
T Consensus        77 ~~~~~~~~~g~iD~lv~~Ag~~~   99 (265)
T 1qsg_A           77 MFAELGKVWPKFDGFVHSIGFAP   99 (265)
T ss_dssp             HHHHHHTTCSSEEEEEECCCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCC
Confidence            99999999999999999999753

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.78  E-value=3e-18  Score=113.34  Aligned_cols=91  Identities=23%  Similarity=0.335  Sum_probs=75.5

Q ss_pred             CCCCcEEEEecCC--ChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           14 DLNEKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        14 ~~~~~~~lvtG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ++.+|+++|||++  +|||++++++|+++|++|++++|+.+ .++..+++....       ..+.++.+|++ ++++++.
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~-------~~~~~~~~D~~-~~~~v~~   75 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEAL-------GGALLFRADVT-QDEELDA   75 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHT-------TCCEEEECCTT-CHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhc-------CCcEEEECCCC-CHHHHHH
Confidence            4578999999998  99999999999999999999999875 333334443211       13678899996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++++.+.++++|+||||||+.
T Consensus        76 ~~~~~~~~~g~iD~lv~~Ag~~   97 (261)
T 2wyu_A           76 LFAGVKEAFGGLDYLVHAIAFA   97 (261)
T ss_dssp             HHHHHHHHHSSEEEEEECCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCCC
Confidence            9999999999999999999975

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.78  E-value=1.9e-18  Score=113.97  Aligned_cols=86  Identities=29%  Similarity=0.404  Sum_probs=69.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .++.+|+++|||+++|||++++++|+++|++|++++|+.+..   .+.+          ..++.++.+|++ ++++++.+
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~----------~~~~~~~~~D~~-~~~~v~~~   70 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VADL----------GDRARFAAADVT-DEAAVASA   70 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH---HHHT----------CTTEEEEECCTT-CHHHHHHH
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH---HHhc----------CCceEEEECCCC-CHHHHHHH
Confidence            357799999999999999999999999999999999965432   2222          146889999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++.+.+ ++++|+||||||+.
T Consensus        71 ~~~~~~-~g~id~lv~nAg~~   90 (257)
T 3tl3_A           71 LDLAET-MGTLRIVVNCAGTG   90 (257)
T ss_dssp             HHHHHH-HSCEEEEEECGGGS
T ss_pred             HHHHHH-hCCCCEEEECCCCC
Confidence            998866 89999999999974

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.78  E-value=1.2e-18  Score=114.65  Aligned_cols=85  Identities=34%  Similarity=0.527  Sum_probs=76.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      |+++|||+++|||++++++|+++|++|++++|+.+.+++..+++.          .++.++.+|++ ++++++.+++++.
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dv~-~~~~v~~~~~~~~   69 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG----------DNLYIAQLDVR-NRAAIEEMLASLP   69 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----------TTEEEEECCTT-CHHHHHHHHHTSC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----------CceEEEEcCCC-CHHHHHHHHHHHH
Confidence            579999999999999999999999999999999888777776663          25788999996 8999999999988


Q ss_pred             HHcCCccEEEeCCccC
Q 033624           98 EAFGRVDALVNNAGIR  113 (115)
Q Consensus        98 ~~~~~id~li~naG~~  113 (115)
                      +.++++|+||||||+.
T Consensus        70 ~~~g~iD~lvnnAg~~   85 (248)
T 3asu_A           70 AEWCNIDILVNNAGLA   85 (248)
T ss_dssp             TTTCCCCEEEECCCCC
T ss_pred             HhCCCCCEEEECCCcC
Confidence            8899999999999975

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.77  E-value=4.1e-18  Score=111.96  Aligned_cols=93  Identities=29%  Similarity=0.376  Sum_probs=78.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEE-ecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ++.+|+++|||+++|||++++++|+++|++|+++ .|+.+..++..+++...+       .++..+.+|++ +.++++.+
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~-~~~~~~~~   75 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNG-------GSAFSIGANLE-SLHGVEAL   75 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTT-------CEEEEEECCTT-SHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcC-------CceEEEecCcC-CHHHHHHH
Confidence            4679999999999999999999999999999885 667777777777776543       57889999995 89999999


Q ss_pred             HHHHHHHcC------CccEEEeCCccCC
Q 033624           93 VQKAWEAFG------RVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~------~id~li~naG~~~  114 (115)
                      ++++.+.++      ++|+||||||+..
T Consensus        76 ~~~~~~~~~~~~~~~~id~lv~nAg~~~  103 (255)
T 3icc_A           76 YSSLDNELQNRTGSTKFDILINNAGIGP  103 (255)
T ss_dssp             HHHHHHHHHHHHSSSCEEEEEECCCCCC
T ss_pred             HHHHHHHhcccccCCcccEEEECCCCCC
Confidence            998877764      4999999999853

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.77  E-value=5.2e-18  Score=110.71  Aligned_cols=90  Identities=30%  Similarity=0.503  Sum_probs=77.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEE-ecccchHHHHHHHhhCCCCCCCCCccceEE-EEeecCCCHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDSVRAVA-VELDVCADGATIEISVQ   94 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~di~~~~~~~~~~~~   94 (115)
                      +|+++|||+++|||++++++|+++|++|+++ +|+.+..++..+.++..+       .++.. +.+|++ +.++++.+++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~D~~-~~~~~~~~~~   72 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRG-------SPLVAVLGANLL-EAEAATALVH   72 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTT-------CSCEEEEECCTT-SHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-------CceEEEEeccCC-CHHHHHHHHH
Confidence            4789999999999999999999999999998 888887777777665432       34555 899996 8999999999


Q ss_pred             HHHHHcCCccEEEeCCccCC
Q 033624           95 KAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~~  114 (115)
                      ++.+.++++|+||||||+..
T Consensus        73 ~~~~~~~~~d~li~~Ag~~~   92 (245)
T 2ph3_A           73 QAAEVLGGLDTLVNNAGITR   92 (245)
T ss_dssp             HHHHHHTCCCEEEECCCCCC
T ss_pred             HHHHhcCCCCEEEECCCCCC
Confidence            99999999999999999753

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.77  E-value=4e-18  Score=113.13  Aligned_cols=90  Identities=23%  Similarity=0.351  Sum_probs=75.7

Q ss_pred             CCCCcEEEEecC--CChHHHHHHHHHHHhCCeEEEEecccchH-HHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           14 DLNEKVVMVTGA--SSGLGREFCLDLAKAGCRIVAAARRVDRL-KSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        14 ~~~~~~~lvtG~--~~giG~~~a~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      .+.+|+++|||+  ++|||++++++|+++|++|++++|+.+.. ++..+.+          +.++.++.+|++ ++++++
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~~Dv~-~~~~v~   72 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL----------PAKAPLLELDVQ-NEEHLA   72 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS----------SSCCCEEECCTT-CHHHHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc----------CCCceEEEccCC-CHHHHH
Confidence            467999999999  99999999999999999999999987652 3333222          135678899996 899999


Q ss_pred             HHHHHHHHHcC---CccEEEeCCccCC
Q 033624           91 ISVQKAWEAFG---RVDALVNNAGIRG  114 (115)
Q Consensus        91 ~~~~~~~~~~~---~id~li~naG~~~  114 (115)
                      .+++++.+.++   ++|+||||||+..
T Consensus        73 ~~~~~~~~~~g~~~~iD~lv~nAg~~~   99 (269)
T 2h7i_A           73 SLAGRVTEAIGAGNKLDGVVHSIGFMP   99 (269)
T ss_dssp             HHHHHHHHHHCTTCCEEEEEECCCCCC
T ss_pred             HHHHHHHHHhCCCCCceEEEECCccCc
Confidence            99999999999   9999999999753

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.77  E-value=5.5e-18  Score=112.35  Aligned_cols=83  Identities=31%  Similarity=0.554  Sum_probs=73.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .++.+++++|||+++|||++++++|+++|++|++++|+.+.           +       .++.++.+|++ ++++++.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~-------~~~~~~~~Dl~-~~~~v~~~   64 (264)
T 2dtx_A            4 SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------E-------AKYDHIECDVT-NPDQVKAS   64 (264)
T ss_dssp             GGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----------S-------CSSEEEECCTT-CHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----------C-------CceEEEEecCC-CHHHHHHH
Confidence            34678999999999999999999999999999999998654           1       35678899996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+.++++|+||||||+..
T Consensus        65 ~~~~~~~~g~iD~lv~~Ag~~~   86 (264)
T 2dtx_A           65 IDHIFKEYGSISVLVNNAGIES   86 (264)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCCCC
Confidence            9999999999999999999753

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.77  E-value=2.6e-18  Score=120.16  Aligned_cols=89  Identities=20%  Similarity=0.202  Sum_probs=75.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHH-hCCeEEEEecccchHH------------HHHHHhhCCCCCCCCCccceEEEEeec
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAK-AGCRIVAAARRVDRLK------------SLCDEINKPGMVGSPDSVRAVAVELDV   82 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~-~g~~v~~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~di   82 (115)
                      .+|++||||+++|||+++|+.|++ .|++|++++|+.+..+            ...+.++..+       .++..+.+|+
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G-------~~a~~i~~Dv  132 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAG-------LYSKSINGDA  132 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTT-------CCEEEEESCT
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcC-------CcEEEEEecC
Confidence            489999999999999999999999 9999999998765432            2234444433       5688899999


Q ss_pred             CCCHHHHHHHHHHHHHHc-CCccEEEeCCcc
Q 033624           83 CADGATIEISVQKAWEAF-GRVDALVNNAGI  112 (115)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~-~~id~li~naG~  112 (115)
                      + ++++++.+++.+.+.+ |+||+||||||+
T Consensus       133 t-d~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          133 F-SDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             T-SHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             C-CHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            6 8999999999999999 999999999987

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.77  E-value=8.9e-18  Score=109.16  Aligned_cols=86  Identities=36%  Similarity=0.477  Sum_probs=75.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      ++++++|||+++|||++++++|+++|++|++++|+.+..++..+.+.           ++..+.+|++ ++++++.++++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------~~~~~~~D~~-~~~~~~~~~~~   71 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE-----------GALPLPGDVR-EEGDWARAVAA   71 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-----------TCEEEECCTT-CHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-----------hceEEEecCC-CHHHHHHHHHH
Confidence            47899999999999999999999999999999999877766655442           4678899996 89999999999


Q ss_pred             HHHHcCCccEEEeCCccC
Q 033624           96 AWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~  113 (115)
                      +.+.++++|+||||||+.
T Consensus        72 ~~~~~~~id~li~~Ag~~   89 (234)
T 2ehd_A           72 MEEAFGELSALVNNAGVG   89 (234)
T ss_dssp             HHHHHSCCCEEEECCCCC
T ss_pred             HHHHcCCCCEEEECCCcC
Confidence            999999999999999975

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.77  E-value=3.1e-18  Score=113.05  Aligned_cols=84  Identities=26%  Similarity=0.385  Sum_probs=71.0

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      +...+.+|+++|||+++|||++++++|+++|++|++++|+.+..+                  .+.++.+|++ ++++++
T Consensus        15 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------------------~~~~~~~Dl~-d~~~v~   75 (253)
T 2nm0_A           15 VPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE------------------GFLAVKCDIT-DTEQVE   75 (253)
T ss_dssp             -----CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------------------TSEEEECCTT-SHHHHH
T ss_pred             CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc------------------cceEEEecCC-CHHHHH
Confidence            345678999999999999999999999999999999999764321                  2567899996 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .+++++.+.++++|+||||||+.
T Consensus        76 ~~~~~~~~~~g~iD~lv~nAg~~   98 (253)
T 2nm0_A           76 QAYKEIEETHGPVEVLIANAGVT   98 (253)
T ss_dssp             HHHHHHHHHTCSCSEEEEECSCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCC
Confidence            99999999999999999999975

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.76  E-value=1.2e-17  Score=109.79  Aligned_cols=92  Identities=26%  Similarity=0.325  Sum_probs=73.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCe-EEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCH-HHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADG-ATIEI   91 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~-~~~~~   91 (115)
                      ++.+++++|||+++|||++++++|+++|++ |++++|+...  +..+++....     ...++.++.+|++ ++ ++++.
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~-----~~~~~~~~~~D~~-~~~~~~~~   73 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAIN-----PKVNITFHTYDVT-VPVAESKK   73 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHC-----TTSEEEEEECCTT-SCHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhC-----CCceEEEEEEecC-CChHHHHH
Confidence            367899999999999999999999999997 9999998642  1122222111     0246888999996 66 89999


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++++.+.++++|+||||||+.
T Consensus        74 ~~~~~~~~~g~id~lv~~Ag~~   95 (254)
T 1sby_A           74 LLKKIFDQLKTVDILINGAGIL   95 (254)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHhcCCCCEEEECCccC
Confidence            9999999999999999999975

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.76  E-value=7.2e-18  Score=110.58  Aligned_cols=89  Identities=28%  Similarity=0.390  Sum_probs=73.2

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      +...+.+++++|||+++|||++++++|+++|++|++++|+.+.+++..+.+.          .++.++.+|++ +.++++
T Consensus         8 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~-~~~~~~   76 (249)
T 3f9i_A            8 HMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK----------DNYTIEVCNLA-NKEECS   76 (249)
T ss_dssp             -CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----------SSEEEEECCTT-SHHHHH
T ss_pred             ccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc----------cCccEEEcCCC-CHHHHH
Confidence            4456789999999999999999999999999999999999988888777764          35778899996 787777


Q ss_pred             HHHHHHHHHcCCccEEEeCCccCC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      .++++    .+++|+||||||+..
T Consensus        77 ~~~~~----~~~id~li~~Ag~~~   96 (249)
T 3f9i_A           77 NLISK----TSNLDILVCNAGITS   96 (249)
T ss_dssp             HHHHT----CSCCSEEEECCC---
T ss_pred             HHHHh----cCCCCEEEECCCCCC
Confidence            66554    478999999999754

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.76  E-value=1.3e-17  Score=115.87  Aligned_cols=91  Identities=18%  Similarity=0.214  Sum_probs=75.8

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHH-hCCeEEEEecccchH------------HHHHHHhhCCCCCCCCCccceEEEEee
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAK-AGCRIVAAARRVDRL------------KSLCDEINKPGMVGSPDSVRAVAVELD   81 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~-~g~~v~~~~r~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~d   81 (115)
                      ..+|+++|||+++|||+++++.|++ .|++|++++++.+..            ....+.++..+       .++..+.+|
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G-------~~a~~i~~D  117 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKG-------LYAKSINGD  117 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTT-------CCEEEEESC
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcC-------CceEEEECC
Confidence            3589999999999999999999999 999999998865432            12233444333       567889999


Q ss_pred             cCCCHHHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           82 VCADGATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        82 i~~~~~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      ++ ++++++.+++++.+.+|+||+||||||+.
T Consensus       118 vt-d~~~v~~~v~~i~~~~G~IDiLVNNAG~~  148 (405)
T 3zu3_A          118 AF-SDEIKQLTIDAIKQDLGQVDQVIYSLASP  148 (405)
T ss_dssp             TT-SHHHHHHHHHHHHHHTSCEEEEEECCCCS
T ss_pred             CC-CHHHHHHHHHHHHHHcCCCCEEEEcCccc
Confidence            96 89999999999999999999999999973

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.75  E-value=4.6e-18  Score=112.94  Aligned_cols=85  Identities=29%  Similarity=0.430  Sum_probs=70.6

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      ++..+.+|+++|||+++|||+++|++|+++|++|++++|+.+...                  ....+.+|++ +.++++
T Consensus        22 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~------------------~~~~~~~Dv~-~~~~~~   82 (266)
T 3uxy_A           22 SMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA------------------ADLHLPGDLR-EAAYAD   82 (266)
T ss_dssp             ----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC------------------CSEECCCCTT-SHHHHH
T ss_pred             hhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH------------------hhhccCcCCC-CHHHHH
Confidence            355678999999999999999999999999999999998754321                  1234578995 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccCC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      .+++++.+.++++|+||||||+..
T Consensus        83 ~~~~~~~~~~g~iD~lvnnAg~~~  106 (266)
T 3uxy_A           83 GLPGAVAAGLGRLDIVVNNAGVIS  106 (266)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCC
Confidence            999999999999999999999864

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.74  E-value=2e-17  Score=112.50  Aligned_cols=91  Identities=33%  Similarity=0.524  Sum_probs=75.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEe---------cccchHHHHHHHhhCCCCCCCCCccceEEEEeecC
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAA---------RRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVC   83 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~---------r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~   83 (115)
                      .++.+|+++|||+++|||+++++.|+++|++|++.+         |+.+..+...+++...+       ..   ..+|++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~-------~~---~~~D~~   74 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG-------GK---AVANYD   74 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT-------CE---EEEECC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhC-------Ce---EEEeCC
Confidence            357899999999999999999999999999999964         45666777777776432       22   247995


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           84 ADGATIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                       +.++++.+++++.+.++++|+||||||+..
T Consensus        75 -~~~~~~~~~~~~~~~~g~iD~lVnnAG~~~  104 (319)
T 1gz6_A           75 -SVEAGEKLVKTALDTFGRIDVVVNNAGILR  104 (319)
T ss_dssp             -CGGGHHHHHHHHHHHTSCCCEEEECCCCCC
T ss_pred             -CHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence             788899999999999999999999999864

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.74  E-value=1.9e-17  Score=108.00  Aligned_cols=88  Identities=32%  Similarity=0.421  Sum_probs=75.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhC--CeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+++++|||+++|||++++++|+++|  ++|++++|+.+..+.+.+ +  .       ..++.++.+|++ ++++++.++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~-~--~-------~~~~~~~~~D~~-~~~~~~~~~   70 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS-I--K-------DSRVHVLPLTVT-CDKSLDTFV   70 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT-C--C-------CTTEEEEECCTT-CHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh-c--c-------CCceEEEEeecC-CHHHHHHHH
Confidence            57899999999999999999999999  999999999877654322 1  1       246889999996 899999999


Q ss_pred             HHHHHHcC--CccEEEeCCccCC
Q 033624           94 QKAWEAFG--RVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~--~id~li~naG~~~  114 (115)
                      +++.+.++  ++|+||||||+..
T Consensus        71 ~~~~~~~g~~~id~li~~Ag~~~   93 (250)
T 1yo6_A           71 SKVGEIVGSDGLSLLINNAGVLL   93 (250)
T ss_dssp             HHHHHHHGGGCCCEEEECCCCCC
T ss_pred             HHHHHhcCCCCCcEEEECCcccC
Confidence            99999888  9999999999864

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.74  E-value=1.5e-17  Score=109.84  Aligned_cols=94  Identities=20%  Similarity=0.268  Sum_probs=76.2

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhC---CeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAG---CRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGAT   88 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~   88 (115)
                      ...+.+++++|||+++|||++++++|+++|   ++|++++|+.+..+.+ +.+...+       .++.++.+|++ +.++
T Consensus        16 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~-------~~~~~~~~Dl~-~~~~   86 (267)
T 1sny_A           16 PRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNH-------SNIHILEIDLR-NFDA   86 (267)
T ss_dssp             ----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHC-------TTEEEEECCTT-CGGG
T ss_pred             ccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccC-------CceEEEEecCC-ChHH
Confidence            345779999999999999999999999999   9999999987765543 2332211       46889999996 8899


Q ss_pred             HHHHHHHHHHHcC--CccEEEeCCccCC
Q 033624           89 IEISVQKAWEAFG--RVDALVNNAGIRG  114 (115)
Q Consensus        89 ~~~~~~~~~~~~~--~id~li~naG~~~  114 (115)
                      ++.+++++.+.++  ++|+||||||+..
T Consensus        87 v~~~~~~~~~~~g~~~id~li~~Ag~~~  114 (267)
T 1sny_A           87 YDKLVADIEGVTKDQGLNVLFNNAGIAP  114 (267)
T ss_dssp             HHHHHHHHHHHHGGGCCSEEEECCCCCC
T ss_pred             HHHHHHHHHHhcCCCCccEEEECCCcCC
Confidence            9999999999888  8999999999854

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.74  E-value=1.7e-17  Score=108.75  Aligned_cols=84  Identities=27%  Similarity=0.421  Sum_probs=68.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+|+++|||+++|||++++++|+++|++|++++|+.+.+++.. .+           .++.++.+|++ ++++++   
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~-----------~~~~~~~~D~~-~~~~~~---   66 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY-----------PGIQTRVLDVT-KKKQID---   66 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS-----------TTEEEEECCTT-CHHHHH---
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc-----------cCceEEEeeCC-CHHHHH---
Confidence            467999999999999999999999999999999999876544322 11           15778899996 787776   


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                       ++.+.++++|+||||||+..
T Consensus        67 -~~~~~~~~id~lv~~Ag~~~   86 (246)
T 2ag5_A           67 -QFANEVERLDVLFNVAGFVH   86 (246)
T ss_dssp             -HHHHHCSCCSEEEECCCCCC
T ss_pred             -HHHHHhCCCCEEEECCccCC
Confidence             44556789999999999753

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.73  E-value=2.1e-17  Score=108.50  Aligned_cols=83  Identities=29%  Similarity=0.441  Sum_probs=71.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+.+|+++|||+++|||++++++|+++|++|++++|+.+..+                  .+..+.+|++ ++++++.+
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------------~~~~~~~D~~-~~~~~~~~   71 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK------------------GLFGVEVDVT-DSDAVDRA   71 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------------------TSEEEECCTT-CHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH------------------HhcCeeccCC-CHHHHHHH
Confidence            4578999999999999999999999999999999999865321                  1124789996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+.++++|+||||||+..
T Consensus        72 ~~~~~~~~g~id~lv~~Ag~~~   93 (247)
T 1uzm_A           72 FTAVEEHQGPVEVLVSNAGLSA   93 (247)
T ss_dssp             HHHHHHHHSSCSEEEEECSCCC
T ss_pred             HHHHHHHcCCCCEEEECCCCCC
Confidence            9999999999999999999753

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.73  E-value=7.4e-17  Score=106.04  Aligned_cols=82  Identities=32%  Similarity=0.451  Sum_probs=71.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+++++|||+++|||++++++|+++|++|++++|+.+.        +.         ..+..+.+|++ ++++++.++
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~---------~~~~~~~~D~~-d~~~~~~~~   65 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQ---------YPFATEVMDVA-DAAQVAQVC   65 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SC---------CSSEEEECCTT-CHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hc---------CCceEEEcCCC-CHHHHHHHH
Confidence            3678999999999999999999999999999999998651        11         11678889996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+.++++|+||||||+.
T Consensus        66 ~~~~~~~g~id~lv~~Ag~~   85 (250)
T 2fwm_X           66 QRLLAETERLDALVNAAGIL   85 (250)
T ss_dssp             HHHHHHCSCCCEEEECCCCC
T ss_pred             HHHHHHcCCCCEEEECCCcC
Confidence            99999999999999999975

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.73  E-value=4.2e-17  Score=114.31  Aligned_cols=91  Identities=19%  Similarity=0.248  Sum_probs=76.0

Q ss_pred             CCCcEEEEecCCChHHHH--HHHHHHHhCCeEEEEecccch------------HHHHHHHhhCCCCCCCCCccceEEEEe
Q 033624           15 LNEKVVMVTGASSGLGRE--FCLDLAKAGCRIVAAARRVDR------------LKSLCDEINKPGMVGSPDSVRAVAVEL   80 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~--~a~~l~~~g~~v~~~~r~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (115)
                      ..+|+++|||+++|||++  +++.|++.|++|++++|+...            .+.+.+.++..+       .++..+.+
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g-------~~~~~~~~  130 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKG-------LVAKNFIE  130 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTT-------CCEEEEES
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcC-------CcEEEEEe
Confidence            569999999999999999  999999999999999986543            233344444332       56889999


Q ss_pred             ecCCCHHHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           81 DVCADGATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        81 di~~~~~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      |++ ++++++.+++++.+.+++||+||||||+.
T Consensus       131 Dvt-d~~~v~~~v~~i~~~~G~IDiLVnNAG~~  162 (418)
T 4eue_A          131 DAF-SNETKDKVIKYIKDEFGKIDLFVYSLAAP  162 (418)
T ss_dssp             CTT-CHHHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             eCC-CHHHHHHHHHHHHHHcCCCCEEEECCccc
Confidence            996 89999999999999999999999999973

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.72  E-value=5.7e-17  Score=106.69  Aligned_cols=82  Identities=18%  Similarity=0.146  Sum_probs=68.5

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ....++|+++|||+++|||++++++|+++|++|++++|+.+...                   ...+.+|++ +.++++.
T Consensus        17 ~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~-------------------~~~~~~d~~-d~~~v~~   76 (251)
T 3orf_A           17 RGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA-------------------DHSFTIKDS-GEEEIKS   76 (251)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS-------------------SEEEECSCS-SHHHHHH
T ss_pred             cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------------------ccceEEEeC-CHHHHHH
Confidence            34556899999999999999999999999999999999875321                   125678885 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++++.+.++++|+||||||+.
T Consensus        77 ~~~~~~~~~g~iD~li~~Ag~~   98 (251)
T 3orf_A           77 VIEKINSKSIKVDTFVCAAGGW   98 (251)
T ss_dssp             HHHHHHTTTCCEEEEEECCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCccC
Confidence            9999999999999999999975

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.72  E-value=2.6e-17  Score=107.64  Aligned_cols=81  Identities=15%  Similarity=0.128  Sum_probs=70.2

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      ..+++++|||+++|||++++++|+++|++|++++|+.+...                 .....+.+|++ ++++++.+++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----------------~~~~~~~~D~~-~~~~v~~~~~   66 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----------------SASVIVKMTDS-FTEQADQVTA   66 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----------------SEEEECCCCSC-HHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----------------CCcEEEEcCCC-CHHHHHHHHH
Confidence            45899999999999999999999999999999999875421                 13457789996 8999999999


Q ss_pred             HHHHHc--CCccEEEeCCccC
Q 033624           95 KAWEAF--GRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~--~~id~li~naG~~  113 (115)
                      ++.+.+  +++|+||||||+.
T Consensus        67 ~~~~~~~~g~iD~lv~~Ag~~   87 (241)
T 1dhr_A           67 EVGKLLGDQKVDAILCVAGGW   87 (241)
T ss_dssp             HHHHHHTTCCEEEEEECCCCC
T ss_pred             HHHHHhCCCCCCEEEEccccc
Confidence            999998  7999999999975

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.72  E-value=1.1e-16  Score=104.57  Aligned_cols=84  Identities=37%  Similarity=0.467  Sum_probs=69.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+++++|||+++|||++++++|+++|++|++++|+.+..++..+++.           ...++.+|++ ++++++.++
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------~~~~~~~D~~-~~~~~~~~~   71 (244)
T 3d3w_A            4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-----------GIEPVCVDLG-DWEATERAL   71 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-----------TCEEEECCTT-CHHHHHHHH
T ss_pred             ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-----------CCCEEEEeCC-CHHHHHHHH
Confidence            4679999999999999999999999999999999999877766555432           2345689996 788777766


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +    .++++|+||||||+.
T Consensus        72 ~----~~~~id~vi~~Ag~~   87 (244)
T 3d3w_A           72 G----SVGPVDLLVNNAAVA   87 (244)
T ss_dssp             T----TCCCCCEEEECCCCC
T ss_pred             H----HcCCCCEEEECCccC
Confidence            5    568899999999975

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.71  E-value=2.3e-17  Score=107.53  Aligned_cols=80  Identities=15%  Similarity=0.138  Sum_probs=69.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .+++++|||+++|||++++++|+++|++|++++|+.+...                 ....++.+|++ ++++++.++++
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----------------~~~~~~~~D~~-~~~~~~~~~~~   63 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----------------DSNILVDGNKN-WTEQEQSILEQ   63 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----------------SEEEECCTTSC-HHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-----------------cccEEEeCCCC-CHHHHHHHHHH
Confidence            5789999999999999999999999999999999876421                 13456789996 89999999999


Q ss_pred             HHHHc--CCccEEEeCCccC
Q 033624           96 AWEAF--GRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~--~~id~li~naG~~  113 (115)
                      +.+.+  +++|+||||||+.
T Consensus        64 ~~~~~~~g~id~lv~~Ag~~   83 (236)
T 1ooe_A           64 TASSLQGSQVDGVFCVAGGW   83 (236)
T ss_dssp             HHHHHTTCCEEEEEECCCCC
T ss_pred             HHHHhCCCCCCEEEECCccc
Confidence            99988  7999999999975

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.71  E-value=1.6e-17  Score=121.34  Aligned_cols=95  Identities=36%  Similarity=0.465  Sum_probs=64.8

Q ss_pred             cCCCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEec---------ccchHHHHHHHhhCCCCCCCCCccceEEEE
Q 033624            9 LEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR---------RVDRLKSLCDEINKPGMVGSPDSVRAVAVE   79 (115)
Q Consensus         9 ~~~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (115)
                      ..+..++.||+++|||+++|||+++|++|+++|++|++++|         +.+..+...++++..+       ..   ..
T Consensus        11 ~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~-------~~---~~   80 (613)
T 3oml_A           11 SDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAG-------GE---AV   80 (613)
T ss_dssp             ----CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTT-------CC---EE
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhC-------Ce---EE
Confidence            33456788999999999999999999999999999999987         6667777777776543       22   23


Q ss_pred             eecCCCHHHHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           80 LDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        80 ~di~~~~~~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +|++ +.++++.+++++.+.+++||+||||||+..
T Consensus        81 ~D~~-d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~  114 (613)
T 3oml_A           81 ADYN-SVIDGAKVIETAIKAFGRVDILVNNAGILR  114 (613)
T ss_dssp             ECCC-CGGGHHHHHC----------CEECCCCCCC
T ss_pred             EEeC-CHHHHHHHHHHHHHHCCCCcEEEECCCCCC
Confidence            7885 788899999999999999999999999864

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.71  E-value=1.3e-16  Score=104.10  Aligned_cols=84  Identities=33%  Similarity=0.454  Sum_probs=69.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+++++|||+++|||++++++|+++|++|++++|+.+..++..+.+.           .+.++.+|++ ++++++.++
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------~~~~~~~D~~-~~~~~~~~~   71 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-----------GIEPVCVDLG-DWDATEKAL   71 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-----------TCEEEECCTT-CHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc-----------CCCcEEecCC-CHHHHHHHH
Confidence            4678999999999999999999999999999999999877665554431           2445689996 788777766


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +    .++++|+||||||+.
T Consensus        72 ~----~~~~id~vi~~Ag~~   87 (244)
T 1cyd_A           72 G----GIGPVDLLVNNAALV   87 (244)
T ss_dssp             T----TCCCCSEEEECCCCC
T ss_pred             H----HcCCCCEEEECCccc
Confidence            5    568899999999975

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.70  E-value=8.5e-17  Score=117.32  Aligned_cols=90  Identities=36%  Similarity=0.505  Sum_probs=72.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc---------chHHHHHHHhhCCCCCCCCCccceEEEEeecCC
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV---------DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCA   84 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~   84 (115)
                      .+.+|+++|||+++|||+++|+.|+++|++|++.+++.         +.+++..+++...+       .+.   .+|++ 
T Consensus         5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g-------~~~---~~d~~-   73 (604)
T 2et6_A            5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNG-------GVA---VADYN-   73 (604)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTT-------CEE---EEECC-
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcC-------CeE---EEEcC-
Confidence            46799999999999999999999999999999998764         55666677776433       232   25774 


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           85 DGATIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +.++++.+++++.+.+++||+||||||+..
T Consensus        74 d~~~~~~~v~~~~~~~G~iDiLVnNAGi~~  103 (604)
T 2et6_A           74 NVLDGDKIVETAVKNFGTVHVIINNAGILR  103 (604)
T ss_dssp             CTTCHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            566688899999999999999999999864

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.70  E-value=2.5e-16  Score=111.55  Aligned_cols=91  Identities=34%  Similarity=0.444  Sum_probs=73.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+.+++++|||+++|||++++++|+++|++|++++|+... +...+....         ..+.++.+|++ +.++++.+
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~---------~~~~~~~~Dvt-d~~~v~~~  277 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADK---------VGGTALTLDVT-ADDAVDKI  277 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHH---------HTCEEEECCTT-STTHHHHH
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHH---------cCCeEEEEecC-CHHHHHHH
Confidence            34679999999999999999999999999999999987532 222222221         13457899996 88999999


Q ss_pred             HHHHHHHcCC-ccEEEeCCccCC
Q 033624           93 VQKAWEAFGR-VDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~-id~li~naG~~~  114 (115)
                      ++++.+.+++ ||+||||||+..
T Consensus       278 ~~~~~~~~g~~id~lV~nAGv~~  300 (454)
T 3u0b_A          278 TAHVTEHHGGKVDILVNNAGITR  300 (454)
T ss_dssp             HHHHHHHSTTCCSEEEECCCCCC
T ss_pred             HHHHHHHcCCCceEEEECCcccC
Confidence            9999999986 999999999864

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.70  E-value=1.5e-16  Score=103.92  Aligned_cols=80  Identities=30%  Similarity=0.466  Sum_probs=69.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +|+++|||+++|||++++++|+++|++|++++|+.+.   ..+++            .+..+.+|++ + ++++.+++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~------------~~~~~~~D~~-~-~~~~~~~~~~   64 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL------------GAVPLPTDLE-K-DDPKGLVKRA   64 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH------------TCEEEECCTT-T-SCHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh------------CcEEEecCCc-h-HHHHHHHHHH
Confidence            6899999999999999999999999999999998765   22222            1557889996 6 8899999999


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                      .+.++++|+||||||+.
T Consensus        65 ~~~~g~id~lv~~Ag~~   81 (239)
T 2ekp_A           65 LEALGGLHVLVHAAAVN   81 (239)
T ss_dssp             HHHHTSCCEEEECCCCC
T ss_pred             HHHcCCCCEEEECCCCC
Confidence            99999999999999975

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.70  E-value=4.5e-17  Score=117.14  Aligned_cols=90  Identities=20%  Similarity=0.212  Sum_probs=75.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCe-EEEE-eccc-------------chHHHHHHHhhCCCCCCCCCccceEEEEe
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCR-IVAA-ARRV-------------DRLKSLCDEINKPGMVGSPDSVRAVAVEL   80 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~-v~~~-~r~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (115)
                      .+++++|||+++|||+.++++|+++|++ |+++ +|+.             +..++..++++..+       .++.++.|
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-------~~v~~~~~  322 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLG-------ATATVVTC  322 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHT-------CEEEEEEC
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcC-------CEEEEEEC
Confidence            5899999999999999999999999997 6777 8873             44456666666543       57899999


Q ss_pred             ecCCCHHHHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           81 DVCADGATIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        81 di~~~~~~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      |++ +.++++.+++++. .+++||+||||||+..
T Consensus       323 Dvt-d~~~v~~~~~~i~-~~g~id~vVh~AGv~~  354 (525)
T 3qp9_A          323 DLT-DAEAAARLLAGVS-DAHPLSAVLHLPPTVD  354 (525)
T ss_dssp             CTT-SHHHHHHHHHTSC-TTSCEEEEEECCCCCC
T ss_pred             CCC-CHHHHHHHHHHHH-hcCCCcEEEECCcCCC
Confidence            996 8999999999987 7899999999999865

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.69  E-value=1.5e-16  Score=129.93  Aligned_cols=91  Identities=21%  Similarity=0.294  Sum_probs=80.4

Q ss_pred             CCCCcEEEEecCCCh-HHHHHHHHHHHhCCeEEEEecccch-----HHHHHHHhhCCCCCCCCCccceEEEEeecCCCHH
Q 033624           14 DLNEKVVMVTGASSG-LGREFCLDLAKAGCRIVAAARRVDR-----LKSLCDEINKPGMVGSPDSVRAVAVELDVCADGA   87 (115)
Q Consensus        14 ~~~~~~~lvtG~~~g-iG~~~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~   87 (115)
                      .+.||+++|||+++| ||+++|+.|++.|++|++++|+.+.     .+++.+++...+       .++..+.+|++ +.+
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G-------~~~~~v~~Dvt-d~~ 2204 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFD-------ATLWVVPANMA-SYS 2204 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTT-------CEEEEEECCTT-CHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcC-------CeEEEEEecCC-CHH
Confidence            478999999999999 9999999999999999999998776     566666665433       57889999996 899


Q ss_pred             HHHHHHHHHHH----HcCCccEEEeCCcc
Q 033624           88 TIEISVQKAWE----AFGRVDALVNNAGI  112 (115)
Q Consensus        88 ~~~~~~~~~~~----~~~~id~li~naG~  112 (115)
                      +++.+++++.+    .+|+||+||||||+
T Consensus      2205 ~v~~lv~~i~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D         2205 DIDKLVEWVGTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp             HHHHHHHHHTSCCEEEESSSEEEECCCCC
T ss_pred             HHHHHHHHHHhhhhhhcCCCCEEEECCCc
Confidence            99999999988    89999999999997

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.69  E-value=1.5e-16  Score=116.05  Aligned_cols=89  Identities=36%  Similarity=0.542  Sum_probs=71.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+|+++|||+++|||+++|+.|+++|++|++.++..  .++..++++..+       .++..+.+|++   .+.+.++
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g-------~~~~~~~~Dv~---~~~~~~~  386 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAG-------GEAWPDQHDVA---KDSEAII  386 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTT-------CEEEEECCCHH---HHHHHHH
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcC-------CeEEEEEcChH---HHHHHHH
Confidence            57899999999999999999999999999999988643  234455555432       45667778772   4567788


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+++++||+||||||+..
T Consensus       387 ~~~~~~~G~iDiLVnNAGi~~  407 (604)
T 2et6_A          387 KNVIDKYGTIDILVNNAGILR  407 (604)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHhcCCCCEEEECCCCCC
Confidence            888899999999999999864

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.68  E-value=1e-16  Score=104.11  Aligned_cols=83  Identities=20%  Similarity=0.239  Sum_probs=69.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      |+++|||+++|||++++++|+++|++|++++|+.+.+++..+++.          .++.++.+|++ +.++++.+++++.
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~-~~~~v~~~~~~~~   70 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLS----------NNVGYRARDLA-SHQEVEQLFEQLD   70 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCS----------SCCCEEECCTT-CHHHHHHHHHSCS
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----------hccCeEeecCC-CHHHHHHHHHHHh
Confidence            579999999999999999999999999999999888877666551          45778999996 8888888877653


Q ss_pred             HHcCCccEEEeCCccCC
Q 033624           98 EAFGRVDALVNNAGIRG  114 (115)
Q Consensus        98 ~~~~~id~li~naG~~~  114 (115)
                      .   .+|+||||||+..
T Consensus        71 ~---~~d~lv~~Ag~~~   84 (230)
T 3guy_A           71 S---IPSTVVHSAGSGY   84 (230)
T ss_dssp             S---CCSEEEECCCCCC
T ss_pred             h---cCCEEEEeCCcCC
Confidence            3   3499999999753

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.67  E-value=3.5e-16  Score=111.80  Aligned_cols=88  Identities=26%  Similarity=0.407  Sum_probs=75.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCC-eEEEEeccc---chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV---DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      +++++|||+++|||+.++++|+++|+ +|++++|+.   +..++..++++..+       .++.++.||++ +.++++.+
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g-------~~v~~~~~Dvt-d~~~v~~~  310 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLG-------VRVTIAACDAA-DREALAAL  310 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTT-------CEEEEEECCTT-CHHHHHHH
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcC-------CeEEEEEccCC-CHHHHHHH
Confidence            58999999999999999999999999 788888863   34566677776554       67899999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++++.+. ++||+||||||+.
T Consensus       311 ~~~i~~~-g~ld~vVh~AGv~  330 (496)
T 3mje_A          311 LAELPED-APLTAVFHSAGVA  330 (496)
T ss_dssp             HHTCCTT-SCEEEEEECCCCC
T ss_pred             HHHHHHh-CCCeEEEECCccc
Confidence            9987666 7899999999986

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.66  E-value=3.9e-16  Score=116.76  Aligned_cols=91  Identities=24%  Similarity=0.367  Sum_probs=78.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHH-HhCC-eEEEEecc---cchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLA-KAGC-RIVAAARR---VDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~-~~g~-~v~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      .+++++|||+++|||+++|++|+ ++|+ +|++++|+   .+..++..++++..+       .++.++.||++ +.++++
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G-------~~v~~~~~Dvs-d~~~v~  600 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYG-------AEVSLQACDVA-DRETLA  600 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTT-------CEEEEEECCTT-CHHHHH
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcC-------CcEEEEEeecC-CHHHHH
Confidence            58999999999999999999999 7999 59999998   455677777777654       67999999996 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccCCC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIRGN  115 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~~~  115 (115)
                      .+++++.+.+ +||+||||||+..+
T Consensus       601 ~~~~~~~~~~-~id~lVnnAGv~~~  624 (795)
T 3slk_A          601 KVLASIPDEH-PLTAVVHAAGVLDD  624 (795)
T ss_dssp             HHHHTSCTTS-CEEEEEECCCCCCC
T ss_pred             HHHHHHHHhC-CCEEEEECCCcCCC
Confidence            9999987776 99999999999753

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.66  E-value=9.3e-16  Score=109.42  Aligned_cols=90  Identities=21%  Similarity=0.271  Sum_probs=76.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCe-EEEEecccc---hHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVD---RLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~-v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .+++++|||+++|||+.++++|+++|++ |++++|+..   ..++..++++..+       .++.++.+|++ +.+++..
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g-------~~v~~~~~Dv~-d~~~v~~  296 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALG-------ARTTVAACDVT-DRESVRE  296 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTT-------CEEEEEECCTT-CHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcC-------CEEEEEEeCCC-CHHHHHH
Confidence            4789999999999999999999999995 999999864   4556666666543       57889999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+ ..++++|+||||||+..
T Consensus       297 ~~~~i-~~~g~ld~VIh~AG~~~  318 (486)
T 2fr1_A          297 LLGGI-GDDVPLSAVFHAAATLD  318 (486)
T ss_dssp             HHHTS-CTTSCEEEEEECCCCCC
T ss_pred             HHHHH-HhcCCCcEEEECCccCC
Confidence            99988 56789999999999864

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.65  E-value=1.2e-15  Score=99.15  Aligned_cols=77  Identities=32%  Similarity=0.401  Sum_probs=68.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +++++|||+++|||++++++|+++|++|++++|+.+ .                  .++.++.+|++ ++++++.+++++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~------------------~~~~~~~~D~~-~~~~~~~~~~~~   61 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G------------------EDLIYVEGDVT-REEDVRRAVARA   61 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S------------------SSSEEEECCTT-CHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c------------------cceEEEeCCCC-CHHHHHHHHHHH
Confidence            689999999999999999999999999999998764 1                  13468899996 899999999998


Q ss_pred             HHHcCCccEEEeCCccCC
Q 033624           97 WEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        97 ~~~~~~id~li~naG~~~  114 (115)
                       +.++++|++|||||+..
T Consensus        62 -~~~~~~d~li~~ag~~~   78 (242)
T 1uay_A           62 -QEEAPLFAVVSAAGVGL   78 (242)
T ss_dssp             -HHHSCEEEEEECCCCCC
T ss_pred             -HhhCCceEEEEcccccC
Confidence             88899999999999753

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.65  E-value=2.1e-16  Score=104.12  Aligned_cols=82  Identities=18%  Similarity=0.182  Sum_probs=66.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      |+++|||+++|||++++++|+++|++|++++|+.+..+...+ ++..+       .++..+  |    +++++.+++++.
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~-------~~~~~~--d----~~~v~~~~~~~~   67 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETY-------PQLKPM--S----EQEPAELIEAVT   67 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHC-------TTSEEC--C----CCSHHHHHHHHH
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcC-------CcEEEE--C----HHHHHHHHHHHH
Confidence            589999999999999999999999999999999887776554 54322       233322  3    345778888888


Q ss_pred             HHcCCccEEEeCCccC
Q 033624           98 EAFGRVDALVNNAGIR  113 (115)
Q Consensus        98 ~~~~~id~li~naG~~  113 (115)
                      +.++++|+||||||+.
T Consensus        68 ~~~g~iD~lv~nAg~~   83 (254)
T 1zmt_A           68 SAYGQVDVLVSNDIFA   83 (254)
T ss_dssp             HHHSCCCEEEEECCCC
T ss_pred             HHhCCCCEEEECCCcC
Confidence            8899999999999986

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.65  E-value=2.2e-16  Score=107.66  Aligned_cols=93  Identities=27%  Similarity=0.349  Sum_probs=69.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +++++|||+++|||++++++|+++|++|++++|+....+...+.++... .......++.++.+|++ ++++++.+++++
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~   79 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAAR-ALACPPGSLETLQLDVR-DSKSVAAARERV   79 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHH-HTTCCTTSEEEEECCTT-CHHHHHHHHHTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhh-hccCCCCceEEEEecCC-CHHHHHHHHHHH
Confidence            6899999999999999999999999999888876544333222221100 00001246888999996 899999998887


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                        .++++|+||||||+.
T Consensus        80 --~~g~iD~lVnnAG~~   94 (327)
T 1jtv_A           80 --TEGRVDVLVCNAGLG   94 (327)
T ss_dssp             --TTSCCSEEEECCCCC
T ss_pred             --hcCCCCEEEECCCcC
Confidence              358999999999975

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.64  E-value=1.5e-15  Score=120.15  Aligned_cols=97  Identities=21%  Similarity=0.388  Sum_probs=78.4

Q ss_pred             CCCCcEEEEecCCCh-HHHHHHHHHHHhCCeEEEE-ecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           14 DLNEKVVMVTGASSG-LGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        14 ~~~~~~~lvtG~~~g-iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .+.+|+++|||+++| ||+++|+.|++.|++|+++ .|+.+...+..+++....   ...+.++.++.+|++ +.++++.
T Consensus       672 ~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~---~~~g~~v~~v~~DVs-d~~sV~a  747 (1887)
T 2uv8_A          672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKY---GAKGSTLIVVPFNQG-SKQDVEA  747 (1887)
T ss_dssp             CCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHH---CCTTCEEEEEECCTT-CHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHh---hcCCCeEEEEEecCC-CHHHHHH
Confidence            578999999999998 9999999999999999998 577666665555542110   001257889999996 8999999


Q ss_pred             HHHHHHHH-----cC-CccEEEeCCccCC
Q 033624           92 SVQKAWEA-----FG-RVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~-----~~-~id~li~naG~~~  114 (115)
                      +++++.+.     ++ +||+||||||+..
T Consensus       748 lv~~i~~~~~~~G~G~~LDiLVNNAGi~~  776 (1887)
T 2uv8_A          748 LIEFIYDTEKNGGLGWDLDAIIPFAAIPE  776 (1887)
T ss_dssp             HHHHHHSCTTTTSCCCCCSEEEECCCCCC
T ss_pred             HHHHHHHhccccccCCCCeEEEECCCcCC
Confidence            99999888     66 9999999999863

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.64  E-value=9.8e-16  Score=119.01  Aligned_cols=98  Identities=20%  Similarity=0.377  Sum_probs=79.7

Q ss_pred             CCCCCcEEEEecCCCh-HHHHHHHHHHHhCCeEEEE-ecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           13 HDLNEKVVMVTGASSG-LGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~g-iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      ..+.+|+++|||+++| ||+++|++|+++|++|+++ .|+.+..++..+++....   ...+.++.++.+|++ +.++++
T Consensus       472 msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael---~a~Ga~V~vV~~DVT-D~esVe  547 (1688)
T 2pff_A          472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKY---GAKGSTLIVVPFNQG-SKQDVE  547 (1688)
T ss_dssp             CCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTT---CCTTCEEEEEECCSS-STTHHH
T ss_pred             cccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHh---hcCCCeEEEEEeCCC-CHHHHH
Confidence            3577999999999998 9999999999999999988 577666666666664321   111357889999996 899999


Q ss_pred             HHHHHHHHH-----cC-CccEEEeCCccCC
Q 033624           91 ISVQKAWEA-----FG-RVDALVNNAGIRG  114 (115)
Q Consensus        91 ~~~~~~~~~-----~~-~id~li~naG~~~  114 (115)
                      .+++++.+.     ++ +||+||||||+..
T Consensus       548 aLVe~I~e~~~~~GfG~~IDILVNNAGI~~  577 (1688)
T 2pff_A          548 ALIEFIYDTEKNGGLGWDLDAIIPFAAIPE  577 (1688)
T ss_dssp             HHHHHHHSCTTSSSCCCCCCEEECCCCCCC
T ss_pred             HHHHHHHHhccccccCCCCeEEEECCCcCC
Confidence            999999888     77 9999999999853

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.64  E-value=6.5e-16  Score=99.92  Aligned_cols=68  Identities=26%  Similarity=0.424  Sum_probs=58.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+|+++|||+++|||++++++|+++|++|++++|+.+                           +|++ ++++++.++
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------------------------~D~~-~~~~v~~~~   54 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------------------------LDIS-DEKSVYHYF   54 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------------------------CCTT-CHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------------------------cCCC-CHHHHHHHH
Confidence            467999999999999999999999999999999988753                           6885 888888877


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      ++    ++++|+||||||+.
T Consensus        55 ~~----~g~id~lv~nAg~~   70 (223)
T 3uce_A           55 ET----IGAFDHLIVTAGSY   70 (223)
T ss_dssp             HH----HCSEEEEEECCCCC
T ss_pred             HH----hCCCCEEEECCCCC
Confidence            65    48999999999976

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.64  E-value=1.4e-16  Score=108.59  Aligned_cols=93  Identities=19%  Similarity=0.214  Sum_probs=68.9

Q ss_pred             CCcEEEEecCCC--hHHHHHHHHHHHhCCeEEEEecccc---------hHHHHHHHhhCCCCCCCCCccceEEEEeecCC
Q 033624           16 NEKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVD---------RLKSLCDEINKPGMVGSPDSVRAVAVELDVCA   84 (115)
Q Consensus        16 ~~~~~lvtG~~~--giG~~~a~~l~~~g~~v~~~~r~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~   84 (115)
                      .+|+++|||+++  |||+++|++|+++|++|++.++++.         ..+.....+....    .....+..+.+|++ 
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~Dv~-   75 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD----KKMNILDMLPFDAS-   75 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSS----CBCCEEEEEECCTT-
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhc----cccccccccccccc-
Confidence            378999999875  9999999999999999998776652         1111111111111    11234678889986 


Q ss_pred             CH--H------------------HHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           85 DG--A------------------TIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        85 ~~--~------------------~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      +.  +                  +++.+++++.+.+++||+||||||+.
T Consensus        76 ~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~  124 (329)
T 3lt0_A           76 FDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANA  124 (329)
T ss_dssp             CSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCC
T ss_pred             ccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCccc
Confidence            55  5                  89999999999999999999999974

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.63  E-value=2e-15  Score=119.37  Aligned_cols=97  Identities=21%  Similarity=0.338  Sum_probs=77.2

Q ss_pred             CCCCcEEEEecCCCh-HHHHHHHHHHHhCCeEEEEe-cccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           14 DLNEKVVMVTGASSG-LGREFCLDLAKAGCRIVAAA-RRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        14 ~~~~~~~lvtG~~~g-iG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .+.++++||||+++| ||+++|++|+++|++|++++ |+.+......+++....   ...+.++.++.||++ +.++++.
T Consensus       649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el---~~~G~~v~~v~~DVs-d~esV~a  724 (1878)
T 2uv9_A          649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARC---GARGSQLVVVPFNQG-SKQDVEA  724 (1878)
T ss_dssp             CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHH---CCTTCEEEEEECCTT-CHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHh---hccCCeEEEEEcCCC-CHHHHHH
Confidence            477999999999998 99999999999999999985 55555544443332110   001257889999996 8999999


Q ss_pred             HHHHHHHH---cC-CccEEEeCCccCC
Q 033624           92 SVQKAWEA---FG-RVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~---~~-~id~li~naG~~~  114 (115)
                      +++++.+.   ++ +||+||||||+..
T Consensus       725 lv~~i~~~~~~~G~~IDiLVnNAGi~~  751 (1878)
T 2uv9_A          725 LVNYIYDTKNGLGWDLDYVVPFAAIPE  751 (1878)
T ss_dssp             HHHHHHCSSSSCCCCCSEEEECCCCCC
T ss_pred             HHHHHHHhhcccCCCCcEEEeCccccc
Confidence            99999888   88 9999999999864

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.63  E-value=5.8e-15  Score=102.18  Aligned_cols=92  Identities=16%  Similarity=0.163  Sum_probs=76.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHH-HhCCeEEEEecccch------------HHHHHHHhhCCCCCCCCCccceEEEEe
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLA-KAGCRIVAAARRVDR------------LKSLCDEINKPGMVGSPDSVRAVAVEL   80 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~-~~g~~v~~~~r~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (115)
                      ...+|++||||+++|||++++..|+ ..|+.++++.+..+.            .....+.+++.+       .+...+.|
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G-------~~a~~i~~  119 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREG-------LYSVTIDG  119 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHT-------CCEEEEES
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcC-------CCceeEeC
Confidence            3568999999999999999999998 689999988875432            233445555544       67899999


Q ss_pred             ecCCCHHHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           81 DVCADGATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        81 di~~~~~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      |++ +++.++.+++++.+.+|+||+||||+|..
T Consensus       120 Dv~-d~e~i~~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          120 DAF-SDEIKAQVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             CTT-SHHHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             CCC-CHHHHHHHHHHHHHhcCCCCEEEEecccc
Confidence            996 89999999999999999999999999864

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.62  E-value=1e-15  Score=100.20  Aligned_cols=79  Identities=18%  Similarity=0.158  Sum_probs=65.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHH-hCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAK-AGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      .+|+++|||+++|||++++++|++ .|++|++.+|+.+..                 ...+.++.+|++ ++++++.+++
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~-----------------~~~~~~~~~Dv~-~~~~v~~~~~   64 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-----------------AENLKFIKADLT-KQQDITNVLD   64 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC-----------------CTTEEEEECCTT-CHHHHHHHHH
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc-----------------cccceEEecCcC-CHHHHHHHHH
Confidence            578999999999999999999999 788899988875410                 135678999996 8999999885


Q ss_pred             HHHHHcCCccEEEeCCccCC
Q 033624           95 KAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~~  114 (115)
                      .+ + ++++|+||||||+..
T Consensus        65 ~~-~-~~~id~lv~nAg~~~   82 (244)
T 4e4y_A           65 II-K-NVSFDGIFLNAGILI   82 (244)
T ss_dssp             HT-T-TCCEEEEEECCCCCC
T ss_pred             HH-H-hCCCCEEEECCccCC
Confidence            44 3 779999999999853

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.62  E-value=4.8e-16  Score=101.83  Aligned_cols=81  Identities=21%  Similarity=0.172  Sum_probs=65.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEE-e--cccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAA-A--RRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      +|+++|||+++|||++++++|+++|++|+++ +  |+.+.+++..+.+  .+       .       |+. ++++++.++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~-------~-------~~~-~~~~v~~~~   63 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PG-------T-------IAL-AEQKPERLV   63 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TT-------E-------EEC-CCCCGGGHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CC-------C-------ccc-CHHHHHHHH
Confidence            5789999999999999999999999999999 6  9888777666655  11       1       221 445577788


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+.++++|+||||||+..
T Consensus        64 ~~~~~~~g~iD~lv~~Ag~~~   84 (244)
T 1zmo_A           64 DATLQHGEAIDTIVSNDYIPR   84 (244)
T ss_dssp             HHHGGGSSCEEEEEECCCCCT
T ss_pred             HHHHHHcCCCCEEEECCCcCC
Confidence            888888999999999999753

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.62  E-value=1.6e-16  Score=103.99  Aligned_cols=86  Identities=28%  Similarity=0.427  Sum_probs=62.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+|+++|||+++|||++++++|++ |++|++++|+.+..+...+ +           ..+.++.+|++ +... ...+
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-~-----------~~~~~~~~D~~-~~~~-~~~~   66 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-I-----------EGVEPIESDIV-KEVL-EEGG   66 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-S-----------TTEEEEECCHH-HHHH-TSSS
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-h-----------cCCcceecccc-hHHH-HHHH
Confidence            35789999999999999999999988 9999999998877655443 1           24778899995 5544 3344


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      .+..+.++++|+||||||+..
T Consensus        67 ~~~~~~~~~id~lv~~Ag~~~   87 (245)
T 3e9n_A           67 VDKLKNLDHVDTLVHAAAVAR   87 (245)
T ss_dssp             CGGGTTCSCCSEEEECC----
T ss_pred             HHHHHhcCCCCEEEECCCcCC
Confidence            455567789999999999853

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.61  E-value=1.3e-14  Score=104.09  Aligned_cols=86  Identities=27%  Similarity=0.406  Sum_probs=72.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccc---hHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVD---RLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .+++++|||+++|||+.++++|+++|+ +|++++|+..   ..++..++++..+       .++.++.||++ +.+++..
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g-------~~v~~~~~Dvt-d~~~v~~  329 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHG-------CEVVHAACDVA-ERDALAA  329 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTT-------CEEEEEECCSS-CHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcC-------CEEEEEEeCCC-CHHHHHH
Confidence            478999999999999999999999999 5899999863   4566667776543       57889999996 8888888


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.     +++|+||||||+..
T Consensus       330 ~~~~-----~~ld~VVh~AGv~~  347 (511)
T 2z5l_A          330 LVTA-----YPPNAVFHTAGILD  347 (511)
T ss_dssp             HHHH-----SCCSEEEECCCCCC
T ss_pred             HHhc-----CCCcEEEECCcccC
Confidence            8776     68999999999864

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.59  E-value=5.1e-15  Score=96.18  Aligned_cols=81  Identities=25%  Similarity=0.222  Sum_probs=61.9

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccce-EEEEeecCCCHHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRA-VAVELDVCADGATI   89 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~di~~~~~~~   89 (115)
                      +...+.+++++|||++|+||+.++++|+++|++|++++|+.+..+....             ..+ .++.+|++      
T Consensus        15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-------------~~~~~~~~~Dl~------   75 (236)
T 3e8x_A           15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-------------RGASDIVVANLE------   75 (236)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-------------TTCSEEEECCTT------
T ss_pred             cccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-------------CCCceEEEcccH------
Confidence            3456789999999999999999999999999999999999887665432             246 78899995      


Q ss_pred             HHHHHHHHHHcCCccEEEeCCccCC
Q 033624           90 EISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        90 ~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                          +.+.+.++++|+||||||...
T Consensus        76 ----~~~~~~~~~~D~vi~~ag~~~   96 (236)
T 3e8x_A           76 ----EDFSHAFASIDAVVFAAGSGP   96 (236)
T ss_dssp             ----SCCGGGGTTCSEEEECCCCCT
T ss_pred             ----HHHHHHHcCCCEEEECCCCCC
Confidence                233445678999999999753

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.57  E-value=1.3e-14  Score=95.34  Aligned_cols=80  Identities=29%  Similarity=0.349  Sum_probs=59.6

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ...+.+|+++|||+++|||++++++|+++|++|++++|+.+..    +.+           .++.++ +|+.   ++++.
T Consensus        14 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----~~~-----------~~~~~~-~D~~---~~~~~   74 (249)
T 1o5i_A           14 ELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL----KRS-----------GHRYVV-CDLR---KDLDL   74 (249)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHT-----------CSEEEE-CCTT---TCHHH
T ss_pred             HhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH----Hhh-----------CCeEEE-eeHH---HHHHH
Confidence            4567899999999999999999999999999999999987322    222           135566 8882   23444


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.    ..++|+||||||+..
T Consensus        75 ~~~~----~~~iD~lv~~Ag~~~   93 (249)
T 1o5i_A           75 LFEK----VKEVDILVLNAGGPK   93 (249)
T ss_dssp             HHHH----SCCCSEEEECCCCCC
T ss_pred             HHHH----hcCCCEEEECCCCCC
Confidence            4443    348999999999753

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.56  E-value=1.5e-14  Score=98.23  Aligned_cols=86  Identities=20%  Similarity=0.276  Sum_probs=68.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .+++++|||++|+||+.++++|+++|++|++++|+.+......+.+....      +..+.++.+|++ +.+++..+++.
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~Dl~-d~~~~~~~~~~   76 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT------GKTPAFHETDVS-DERALARIFDA   76 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH------SCCCEEECCCTT-CHHHHHHHHHH
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc------CCCceEEEeecC-CHHHHHHHHhc
Confidence            46799999999999999999999999999999998765544444443211      135778899996 88888887765


Q ss_pred             HHHHcCCccEEEeCCccC
Q 033624           96 AWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~  113 (115)
                           .++|++|||||+.
T Consensus        77 -----~~~d~vih~A~~~   89 (341)
T 3enk_A           77 -----HPITAAIHFAALK   89 (341)
T ss_dssp             -----SCCCEEEECCCCC
T ss_pred             -----cCCcEEEECcccc
Confidence                 4799999999975

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.55  E-value=1e-14  Score=98.88  Aligned_cols=96  Identities=28%  Similarity=0.406  Sum_probs=62.4

Q ss_pred             CCCCcEEEEecC--CChHHHHHHHHHHHhCCeEEEEeccc-----------chHHH-----------HHHHhhCCCCCCC
Q 033624           14 DLNEKVVMVTGA--SSGLGREFCLDLAKAGCRIVAAARRV-----------DRLKS-----------LCDEINKPGMVGS   69 (115)
Q Consensus        14 ~~~~~~~lvtG~--~~giG~~~a~~l~~~g~~v~~~~r~~-----------~~~~~-----------~~~~~~~~~~~~~   69 (115)
                      ++.+|+++|||+  ++|||+++++.|+++|++|++++|++           +.+++           ..++++..+.   
T Consensus         6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---   82 (319)
T 2ptg_A            6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPV---   82 (319)
T ss_dssp             CCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC---------------------------------
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccc---
Confidence            367999999999  89999999999999999999998753           11111           1122211100   


Q ss_pred             CCccceEEEEee------------cCC-------CHHHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           70 PDSVRAVAVELD------------VCA-------DGATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        70 ~~~~~~~~~~~d------------i~~-------~~~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                       .......+.+|            +++       ++++++.+++++.+.++++|+||||||+.
T Consensus        83 -~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~  144 (319)
T 2ptg_A           83 -DLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANG  144 (319)
T ss_dssp             ---CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECC
T ss_pred             -cccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence             00002333333            321       13478889999999999999999999974

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.55  E-value=1.6e-14  Score=97.80  Aligned_cols=98  Identities=29%  Similarity=0.285  Sum_probs=65.4

Q ss_pred             CCCCcEEEEecC--CChHHHHHHHHHHHhCCeEEEEecccch------HH-HHHHHhhCCCCCCCCCccceEEEEe----
Q 033624           14 DLNEKVVMVTGA--SSGLGREFCLDLAKAGCRIVAAARRVDR------LK-SLCDEINKPGMVGSPDSVRAVAVEL----   80 (115)
Q Consensus        14 ~~~~~~~lvtG~--~~giG~~~a~~l~~~g~~v~~~~r~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~----   80 (115)
                      ++.+|+++|||+  ++|||++++++|+++|++|++++|++..      .. ...+.++....  ........++.+    
T Consensus         6 ~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~~~   83 (315)
T 2o2s_A            6 DLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPD--GSLIEFAGVYPLDAAF   83 (315)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTT--SCBCCCSCEEECCTTC
T ss_pred             cCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhc--cccccccccccccccc
Confidence            467999999999  8999999999999999999999876410      00 00111121110  000000123333    


Q ss_pred             --------ecCC-------CHHHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           81 --------DVCA-------DGATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        81 --------di~~-------~~~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                              |+++       ++++++.+++++.+.++++|+||||||+.
T Consensus        84 ~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~  131 (315)
T 2o2s_A           84 DKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANG  131 (315)
T ss_dssp             SSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred             cccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence                    3331       24578899999999999999999999975

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.55  E-value=2.1e-14  Score=91.42  Aligned_cols=78  Identities=29%  Similarity=0.475  Sum_probs=65.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      ++++|||+++|||++++++|+++  +|++++|+.+..+...+.+.          .  .++.+|++ ++++++.++++  
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~----------~--~~~~~D~~-~~~~~~~~~~~--   63 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG----------A--RALPADLA-DELEAKALLEE--   63 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT----------C--EECCCCTT-SHHHHHHHHHH--
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc----------C--cEEEeeCC-CHHHHHHHHHh--
Confidence            47999999999999999999998  99999999877776665552          1  67789996 88888888776  


Q ss_pred             HHcCCccEEEeCCccCC
Q 033624           98 EAFGRVDALVNNAGIRG  114 (115)
Q Consensus        98 ~~~~~id~li~naG~~~  114 (115)
                        ++++|+||||||+..
T Consensus        64 --~~~id~vi~~ag~~~   78 (207)
T 2yut_A           64 --AGPLDLLVHAVGKAG   78 (207)
T ss_dssp             --HCSEEEEEECCCCCC
T ss_pred             --cCCCCEEEECCCcCC
Confidence              689999999999753

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.54  E-value=3.4e-14  Score=115.68  Aligned_cols=90  Identities=20%  Similarity=0.231  Sum_probs=73.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCe-EEEEecccchH---HHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRL---KSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .+++++|||+++|||+++|++|+++|++ |++++|+....   .+..++++..+       .++..+.||++ +.++++.
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g-------~~v~~~~~Dvs-d~~~v~~ 1954 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQG-------VQVLVSTSNAS-SLDGARS 1954 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTT-------CEEEEECCCSS-SHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCC-------CEEEEEecCCC-CHHHHHH
Confidence            5899999999999999999999999997 78888886543   33445554333       57889999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++++. .+++||+||||||+..
T Consensus      1955 ~~~~~~-~~g~id~lVnnAgv~~ 1976 (2512)
T 2vz8_A         1955 LITEAT-QLGPVGGVFNLAMVLR 1976 (2512)
T ss_dssp             HHHHHH-HHSCEEEEEECCCC--
T ss_pred             HHHHHH-hcCCCcEEEECCCcCC
Confidence            999886 4799999999999864

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.53  E-value=2.4e-14  Score=97.11  Aligned_cols=86  Identities=14%  Similarity=0.161  Sum_probs=67.4

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ...+.+++++|||++|+||..++++|+++|++|++++|+.+...+.   +...        .++.++.+|++ +.+++..
T Consensus        15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~l--------~~v~~~~~Dl~-d~~~~~~   82 (330)
T 2pzm_A           15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREV---LPPV--------AGLSVIEGSVT-DAGLLER   82 (330)
T ss_dssp             CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGG---SCSC--------TTEEEEECCTT-CHHHHHH
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhh---hhcc--------CCceEEEeeCC-CHHHHHH
Confidence            3567789999999999999999999999999999999965432211   1110        25778899996 8888888


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.     ++|+||||||...
T Consensus        83 ~~~~~-----~~D~vih~A~~~~  100 (330)
T 2pzm_A           83 AFDSF-----KPTHVVHSAAAYK  100 (330)
T ss_dssp             HHHHH-----CCSEEEECCCCCS
T ss_pred             HHhhc-----CCCEEEECCccCC
Confidence            77764     7999999999753

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.53  E-value=1.3e-14  Score=96.06  Aligned_cols=74  Identities=26%  Similarity=0.260  Sum_probs=62.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .+++++|||++++||+.+++.|+++|++|++++|+.....                ..++.++.+|++ +.+++..+++ 
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----------------~~~~~~~~~Dl~-d~~~~~~~~~-   63 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----------------GPNEECVQCDLA-DANAVNAMVA-   63 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----------------CTTEEEEECCTT-CHHHHHHHHT-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----------------CCCCEEEEcCCC-CHHHHHHHHc-
Confidence            4689999999999999999999999999999999864322                146889999996 7887777655 


Q ss_pred             HHHHcCCccEEEeCCccC
Q 033624           96 AWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~  113 (115)
                            ++|+||||||+.
T Consensus        64 ------~~D~vi~~Ag~~   75 (267)
T 3rft_A           64 ------GCDGIVHLGGIS   75 (267)
T ss_dssp             ------TCSEEEECCSCC
T ss_pred             ------CCCEEEECCCCc
Confidence                  689999999974

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.51  E-value=2e-13  Score=93.38  Aligned_cols=83  Identities=19%  Similarity=0.322  Sum_probs=68.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHh-CC-eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKA-GC-RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .+.+++++|||++|+||..++++|+++ |+ +|++++|+........+.+..         .++.++.+|++ +.+++..
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~---------~~v~~~~~Dl~-d~~~l~~   87 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFND---------PRMRFFIGDVR-DLERLNY   87 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCC---------TTEEEEECCTT-CHHHHHH
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcC---------CCEEEEECCCC-CHHHHHH
Confidence            467899999999999999999999999 98 999999998777666666532         35788999996 7766665


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      ++       .++|+||||||..
T Consensus        88 ~~-------~~~D~Vih~Aa~~  102 (344)
T 2gn4_A           88 AL-------EGVDICIHAAALK  102 (344)
T ss_dssp             HT-------TTCSEEEECCCCC
T ss_pred             HH-------hcCCEEEECCCCC
Confidence            54       3689999999975

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.51  E-value=1.9e-13  Score=91.71  Aligned_cols=97  Identities=22%  Similarity=0.227  Sum_probs=64.7

Q ss_pred             CCCCcEEEEecCC--ChHHHHHHHHHHHhCCeEEEEecccchHH-------HHHHHhhCCCCCCCCCc-cceEEEEee--
Q 033624           14 DLNEKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAARRVDRLK-------SLCDEINKPGMVGSPDS-VRAVAVELD--   81 (115)
Q Consensus        14 ~~~~~~~lvtG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~~~~d--   81 (115)
                      ++.+|+++|||++  +|||++++++|+++|++|++++|++....       ...+.++...   .... .....+.+|  
T Consensus         5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~   81 (297)
T 1d7o_A            5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP---DGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCT---TSSBCCEEEEEEECTT
T ss_pred             ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhc---ccccccccccccccee
Confidence            4679999999999  99999999999999999999987632110       0001111110   0000 012233333  


Q ss_pred             ------cCC-----------CHHHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           82 ------VCA-----------DGATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        82 ------i~~-----------~~~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                            ++.           ++++++.+++++.+.++++|+||||||+.
T Consensus        82 ~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~  130 (297)
T 1d7o_A           82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANG  130 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCC
T ss_pred             ccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence                  321           14578889999999999999999999964

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.51  E-value=1.3e-13  Score=87.55  Aligned_cols=65  Identities=26%  Similarity=0.433  Sum_probs=56.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      +++|||++++||++++++|+ +|++|++++|+.+                        .+.+|++ ++++++.+++++  
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------------------------~~~~D~~-~~~~~~~~~~~~--   56 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------------------DVTVDIT-NIDSIKKMYEQV--   56 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------------------------SEECCTT-CHHHHHHHHHHH--
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------------------------ceeeecC-CHHHHHHHHHHh--
Confidence            69999999999999999999 9999999998753                        3568996 888888887664  


Q ss_pred             HcCCccEEEeCCccC
Q 033624           99 AFGRVDALVNNAGIR  113 (115)
Q Consensus        99 ~~~~id~li~naG~~  113 (115)
                        +++|++|||||+.
T Consensus        57 --~~~d~vi~~ag~~   69 (202)
T 3d7l_A           57 --GKVDAIVSATGSA   69 (202)
T ss_dssp             --CCEEEEEECCCCC
T ss_pred             --CCCCEEEECCCCC
Confidence              7899999999975

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.49  E-value=1e-14  Score=95.82  Aligned_cols=73  Identities=22%  Similarity=0.282  Sum_probs=58.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      |+++|||+++|||++++++|+++|++|++++|+.+..+.                    .+.+|++ +.++++.+++++ 
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~--------------------~~~~Dl~-~~~~v~~~~~~~-   59 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA--------------------DLSTAEG-RKQAIADVLAKC-   59 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------------------CTTSHHH-HHHHHHHHHTTC-
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc--------------------ccccCCC-CHHHHHHHHHHh-
Confidence            589999999999999999999999999999998653210                    1457885 677777666532 


Q ss_pred             HHcCCccEEEeCCccCC
Q 033624           98 EAFGRVDALVNNAGIRG  114 (115)
Q Consensus        98 ~~~~~id~li~naG~~~  114 (115)
                        .+++|+||||||+..
T Consensus        60 --~~~id~lv~~Ag~~~   74 (257)
T 1fjh_A           60 --SKGMDGLVLCAGLGP   74 (257)
T ss_dssp             --TTCCSEEEECCCCCT
T ss_pred             --CCCCCEEEECCCCCC
Confidence              289999999999864

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.49  E-value=1.9e-13  Score=87.95  Aligned_cols=77  Identities=14%  Similarity=0.148  Sum_probs=61.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHH-HhCCeEEEEecccc-hHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLA-KAGCRIVAAARRVD-RLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~-~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      .|+++|||++++||++++++|+ +.|++|++++|+.+ ..+++..    .       ...+.++.+|++ +++++..+++
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~----~-------~~~~~~~~~D~~-d~~~~~~~~~   72 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII----D-------HERVTVIEGSFQ-NPGXLEQAVT   72 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHH----T-------STTEEEEECCTT-CHHHHHHHHT
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhcc----C-------CCceEEEECCCC-CHHHHHHHHc
Confidence            4689999999999999999999 89999999999876 5443321    1       145788999996 7777776654


Q ss_pred             HHHHHcCCccEEEeCCcc
Q 033624           95 KAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~  112 (115)
                             .+|+||||||.
T Consensus        73 -------~~d~vv~~ag~   83 (221)
T 3r6d_A           73 -------NAEVVFVGAME   83 (221)
T ss_dssp             -------TCSEEEESCCC
T ss_pred             -------CCCEEEEcCCC
Confidence                   68999999985

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.49  E-value=2.6e-13  Score=91.98  Aligned_cols=84  Identities=20%  Similarity=0.241  Sum_probs=65.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH-HHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS-LCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      .+++++|||++|+||..++++|+++|++|++++|+.+.... ..+.+..        ..++.++.+|++ +.+++..+++
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~~Dl~-d~~~~~~~~~   72 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGI--------ENDVKIIHMDLL-EFSNIIRTIE   72 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTC--------TTTEEECCCCTT-CHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccc--------cCceeEEECCCC-CHHHHHHHHH
Confidence            47899999999999999999999999999999998764321 1222211        135778899996 8888888777


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                      ..     ++|+||||||..
T Consensus        73 ~~-----~~d~vih~A~~~   86 (345)
T 2z1m_A           73 KV-----QPDEVYNLAAQS   86 (345)
T ss_dssp             HH-----CCSEEEECCCCC
T ss_pred             hc-----CCCEEEECCCCc
Confidence            65     789999999974

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.48  E-value=3.4e-13  Score=92.45  Aligned_cols=93  Identities=11%  Similarity=0.183  Sum_probs=64.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHH--hCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAK--AGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~--~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .+.+++++|||++|+||..++++|++  .|++|++++|+...........+............+.++.+|++ +.+.++.
T Consensus         7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~~~~   85 (362)
T 3sxp_A            7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADIN-NPLDLRR   85 (362)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTT-CHHHHHH
T ss_pred             hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCC-CHHHHHH
Confidence            46789999999999999999999999  89999999997653221111111111000011235688999996 7776665


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +      ...++|+||||||+.
T Consensus        86 ~------~~~~~D~vih~A~~~  101 (362)
T 3sxp_A           86 L------EKLHFDYLFHQAAVS  101 (362)
T ss_dssp             H------TTSCCSEEEECCCCC
T ss_pred             h------hccCCCEEEECCccC
Confidence            4      345899999999964

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.47  E-value=1.5e-13  Score=93.93  Aligned_cols=84  Identities=18%  Similarity=0.126  Sum_probs=67.6

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +.+++++|||++|+||..++++|+++|++|++++|+.+........+..        ..++.++.+|++ +++++..+++
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dl~-d~~~~~~~~~   77 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV--------ADGMQSEIGDIR-DQNKLLESIR   77 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT--------TTTSEEEECCTT-CHHHHHHHHH
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhcc--------CCceEEEEcccc-CHHHHHHHHH
Confidence            4578999999999999999999999999999999987654444443321        135778999996 8888888777


Q ss_pred             HHHHHcCCccEEEeCCcc
Q 033624           95 KAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~  112 (115)
                      ..     ++|+||||||.
T Consensus        78 ~~-----~~d~vih~A~~   90 (357)
T 1rkx_A           78 EF-----QPEIVFHMAAQ   90 (357)
T ss_dssp             HH-----CCSEEEECCSC
T ss_pred             hc-----CCCEEEECCCC
Confidence            64     69999999985

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.46  E-value=2.4e-13  Score=91.06  Aligned_cols=83  Identities=19%  Similarity=0.306  Sum_probs=66.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+++++|||+++|+|+++++.|++.|++|++++|+.++.+++.+.+...        ..+..+.+|++ ++++++.++
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~--------~~~~~~~~D~~-~~~~~~~~~  186 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR--------FKVNVTAAETA-DDASRAEAV  186 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--------HTCCCEEEECC-SHHHHHHHT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc--------CCcEEEEecCC-CHHHHHHHH
Confidence            467899999999999999999999999999999999988877777666421        12456778995 666655443


Q ss_pred             HHHHHHcCCccEEEeCCcc
Q 033624           94 QKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~  112 (115)
                      +       .+|+||||||+
T Consensus       187 ~-------~~DvlVn~ag~  198 (287)
T 1lu9_A          187 K-------GAHFVFTAGAI  198 (287)
T ss_dssp             T-------TCSEEEECCCT
T ss_pred             H-------hCCEEEECCCc
Confidence            3       47999999975

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.45  E-value=1.4e-13  Score=93.12  Aligned_cols=86  Identities=16%  Similarity=0.169  Sum_probs=65.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEE-EeecCCCHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAV-ELDVCADGATIEIS   92 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~di~~~~~~~~~~   92 (115)
                      .+.+++++|||++|+||..++++|+++|++|++++|+.+....+.+.+....      ..++.++ .+|++ +.+.++.+
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~~D~~-d~~~~~~~   80 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY------PGRFETAVVEDML-KQGAYDEV   80 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS------TTTEEEEECSCTT-STTTTTTT
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC------CCceEEEEecCCc-ChHHHHHH
Confidence            3568999999999999999999999999999999998776655554443211      1356677 79996 55554443


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      +       .++|+||||||..
T Consensus        81 ~-------~~~d~vih~A~~~   94 (342)
T 1y1p_A           81 I-------KGAAGVAHIASVV   94 (342)
T ss_dssp             T-------TTCSEEEECCCCC
T ss_pred             H-------cCCCEEEEeCCCC
Confidence            3       3689999999975

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.45  E-value=2.4e-13  Score=92.31  Aligned_cols=87  Identities=18%  Similarity=0.173  Sum_probs=63.4

Q ss_pred             CCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           11 PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        11 ~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      ++..+.+++++|||++|+||..++++|+++|++|++++|+.....+   .+...        .++.++.+|++ +.+++.
T Consensus        15 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~l~~~--------~~~~~~~~Dl~-d~~~~~   82 (333)
T 2q1w_A           15 VPRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRRE---HLKDH--------PNLTFVEGSIA-DHALVN   82 (333)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GSCCC--------TTEEEEECCTT-CHHHHH
T ss_pred             eeecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchh---hHhhc--------CCceEEEEeCC-CHHHHH
Confidence            4456678999999999999999999999999999999987543211   11110        25778899996 788887


Q ss_pred             HHHHHHHHHcCCccEEEeCCccCC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      .+++.     .++|+||||||...
T Consensus        83 ~~~~~-----~~~D~vih~A~~~~  101 (333)
T 2q1w_A           83 QLIGD-----LQPDAVVHTAASYK  101 (333)
T ss_dssp             HHHHH-----HCCSEEEECCCCCS
T ss_pred             HHHhc-----cCCcEEEECceecC
Confidence            77765     27999999999753

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.43  E-value=1.1e-12  Score=85.42  Aligned_cols=76  Identities=26%  Similarity=0.222  Sum_probs=61.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHh--CCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKA--GCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++++++|||++|+||+.++++|+++  |++|++++|+.+..+.    +.          ..+.++.+|++ +.+++..++
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~----~~----------~~~~~~~~D~~-d~~~~~~~~   67 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK----IG----------GEADVFIGDIT-DADSINPAF   67 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHH----TT----------CCTTEEECCTT-SHHHHHHHH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhh----cC----------CCeeEEEecCC-CHHHHHHHH
Confidence            4789999999999999999999999  8999999998755432    21          24567889996 777776655


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +       .+|++|||||..
T Consensus        68 ~-------~~d~vi~~a~~~   80 (253)
T 1xq6_A           68 Q-------GIDALVILTSAV   80 (253)
T ss_dssp             T-------TCSEEEECCCCC
T ss_pred             c-------CCCEEEEecccc
Confidence            3       589999999975

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.43  E-value=4.9e-14  Score=91.61  Aligned_cols=78  Identities=17%  Similarity=0.154  Sum_probs=60.8

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCC--eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      +.+++++|||++++||++++++|+++|+  +|++++|+.+......             ...+.++.+|++ +++++..+
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-------------~~~~~~~~~D~~-d~~~~~~~   81 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-------------YKNVNQEVVDFE-KLDDYASA   81 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-------------GGGCEEEECCGG-GGGGGGGG
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-------------cCCceEEecCcC-CHHHHHHH
Confidence            4678999999999999999999999999  9999999875432110             124678899996 66555543


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      +       .++|+||||||..
T Consensus        82 ~-------~~~d~vi~~ag~~   95 (242)
T 2bka_A           82 F-------QGHDVGFCCLGTT   95 (242)
T ss_dssp             G-------SSCSEEEECCCCC
T ss_pred             h-------cCCCEEEECCCcc
Confidence            3       3799999999964

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.43  E-value=1.2e-13  Score=89.83  Aligned_cols=77  Identities=21%  Similarity=0.213  Sum_probs=61.4

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhC-CeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.++++|||++++||+++++.|+++| ++|++++|+.+....       ..      ...+.++.+|++ ++++++.++
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~-------~~------~~~~~~~~~Dl~-d~~~~~~~~   86 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHK-------PY------PTNSQIIMGDVL-NHAALKQAM   86 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS-------SC------CTTEEEEECCTT-CHHHHHHHH
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc-------cc------cCCcEEEEecCC-CHHHHHHHh
Confidence            346899999999999999999999999 899999998765321       10      135788999996 777777665


Q ss_pred             HHHHHHcCCccEEEeCCcc
Q 033624           94 QKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~  112 (115)
                      +       .+|+||||+|.
T Consensus        87 ~-------~~D~vv~~a~~   98 (236)
T 3qvo_A           87 Q-------GQDIVYANLTG   98 (236)
T ss_dssp             T-------TCSEEEEECCS
T ss_pred             c-------CCCEEEEcCCC
Confidence            4       57999999985

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.42  E-value=4e-12  Score=86.23  Aligned_cols=82  Identities=13%  Similarity=0.067  Sum_probs=63.7

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc-chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      ++++|||++|+||..++++|++.|++|++++|+. .......+.+...        .++.++.+|++ +.+++..+++..
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~--------~~~~~~~~Dl~-d~~~~~~~~~~~   72 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL--------GNFEFVHGDIR-NKNDVTRLITKY   72 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT--------CCCEEEECCTT-CHHHHHHHHHHH
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccC--------CceEEEEcCCC-CHHHHHHHHhcc
Confidence            4799999999999999999999999999998853 2233333444321        25778899996 888888777652


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                           ++|+||||||..
T Consensus        73 -----~~d~vih~A~~~   84 (347)
T 1orr_A           73 -----MPDSCFHLAGQV   84 (347)
T ss_dssp             -----CCSEEEECCCCC
T ss_pred             -----CCCEEEECCccc
Confidence                 699999999974

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.42  E-value=6.4e-13  Score=90.37  Aligned_cols=85  Identities=21%  Similarity=0.296  Sum_probs=62.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch------HHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR------LKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      +++++|||++|+||..++++|+++|++|++++|+...      ..+..+.+....      ..++.++.+|++ +.+++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~~D~~-~~~~~~   74 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT------GRSVEFEEMDIL-DQGALQ   74 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH------TCCCEEEECCTT-CHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc------CCceEEEECCCC-CHHHHH
Confidence            5789999999999999999999999999999875432      112222222100      135778899996 787777


Q ss_pred             HHHHHHHHHcCCccEEEeCCccC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .+++.    . ++|+||||||..
T Consensus        75 ~~~~~----~-~~d~vih~A~~~   92 (348)
T 1ek6_A           75 RLFKK----Y-SFMAVIHFAGLK   92 (348)
T ss_dssp             HHHHH----C-CEEEEEECCSCC
T ss_pred             HHHHh----c-CCCEEEECCCCc
Confidence            76654    2 799999999975

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.42  E-value=1.1e-13  Score=90.28  Aligned_cols=73  Identities=23%  Similarity=0.357  Sum_probs=58.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      ++++|||++++||++++++|+++|++|++++|+.+..+                 .   .+.+|++ ++++++.+++++ 
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------------~---~~~~D~~-~~~~~~~~~~~~-   59 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE-----------------A---DLSTPGG-RETAVAAVLDRC-   59 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----------------C---CTTSHHH-HHHHHHHHHHHH-
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc-----------------c---cccCCcc-cHHHHHHHHHHc-
Confidence            57999999999999999999999999999999865321                 0   1457885 677777776643 


Q ss_pred             HHcCCccEEEeCCccCC
Q 033624           98 EAFGRVDALVNNAGIRG  114 (115)
Q Consensus        98 ~~~~~id~li~naG~~~  114 (115)
                        .+++|+||||||+..
T Consensus        60 --~~~~d~vi~~Ag~~~   74 (255)
T 2dkn_A           60 --GGVLDGLVCCAGVGV   74 (255)
T ss_dssp             --TTCCSEEEECCCCCT
T ss_pred             --CCCccEEEECCCCCC
Confidence              378999999999754

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.41  E-value=1.2e-12  Score=89.11  Aligned_cols=89  Identities=19%  Similarity=0.191  Sum_probs=65.6

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +.+++++|||++|+||..++++|+++|++|++++|+..........+.....  .....++.++.+|++ +.+++..+++
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dl~-d~~~~~~~~~   99 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVS--TEQWSRFCFIEGDIR-DLTTCEQVMK   99 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSC--HHHHTTEEEEECCTT-CHHHHHHHTT
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccc--cccCCceEEEEccCC-CHHHHHHHhc
Confidence            4578999999999999999999999999999999976544443444432110  000035788999996 7766665543


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                             ++|++||+||..
T Consensus       100 -------~~d~Vih~A~~~  111 (351)
T 3ruf_A          100 -------GVDHVLHQAALG  111 (351)
T ss_dssp             -------TCSEEEECCCCC
T ss_pred             -------CCCEEEECCccC
Confidence                   689999999964

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.41  E-value=1.5e-12  Score=89.19  Aligned_cols=88  Identities=17%  Similarity=0.206  Sum_probs=59.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHH-HHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK-SLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      +++++|||++|+||..++++|+++|++|++++|+.+... ...+.+....   .....++.++.+|++ +.+++..+++.
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~-d~~~~~~~~~~   76 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDP---HTCNPKFHLHYGDLS-DTSNLTRILRE   76 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC------------------------CCEEECCCCSS-CHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhcc---ccCCCceEEEECCCC-CHHHHHHHHHh
Confidence            368999999999999999999999999999999765421 1111111100   000135778899996 88888887776


Q ss_pred             HHHHcCCccEEEeCCccC
Q 033624           96 AWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~  113 (115)
                      .     ++|++|||||..
T Consensus        77 ~-----~~d~vih~A~~~   89 (372)
T 1db3_A           77 V-----QPDEVYNLGAMS   89 (372)
T ss_dssp             H-----CCSEEEECCCCC
T ss_pred             c-----CCCEEEECCccc
Confidence            4     689999999974

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.40  E-value=1e-12  Score=89.36  Aligned_cols=77  Identities=17%  Similarity=0.217  Sum_probs=57.7

Q ss_pred             CCCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHH
Q 033624           10 EPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATI   89 (115)
Q Consensus        10 ~~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~   89 (115)
                      .+.....+++++|||++|+||..+++.|+++|++|++++|+.+.                   ..+.++.+|++ +.+.+
T Consensus        12 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------------------~~~~~~~~Dl~-d~~~~   71 (347)
T 4id9_A           12 SGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------------------TGGEEVVGSLE-DGQAL   71 (347)
T ss_dssp             ---------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------------------SCCSEEESCTT-CHHHH
T ss_pred             CcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------------------CCccEEecCcC-CHHHH
Confidence            34556778999999999999999999999999999999998654                   13567889996 77766


Q ss_pred             HHHHHHHHHHcCCccEEEeCCccC
Q 033624           90 EISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        90 ~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      ..+++       ++|++||+||..
T Consensus        72 ~~~~~-------~~d~vih~A~~~   88 (347)
T 4id9_A           72 SDAIM-------GVSAVLHLGAFM   88 (347)
T ss_dssp             HHHHT-------TCSEEEECCCCC
T ss_pred             HHHHh-------CCCEEEECCccc
Confidence            65544       689999999875

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.40  E-value=2.6e-12  Score=86.91  Aligned_cols=85  Identities=19%  Similarity=0.141  Sum_probs=64.1

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHH-HHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK-SLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ..+++++|||++|+||..++++|+++|++|++++|+.+... ...+.+..        ...+.++.+|++ +.+++..++
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~~Dl~-d~~~~~~~~   82 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGI--------EGDIQYEDGDMA-DACSVQRAV   82 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTC--------GGGEEEEECCTT-CHHHHHHHH
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccc--------cCceEEEECCCC-CHHHHHHHH
Confidence            35788999999999999999999999999999999765421 11122211        235788899996 888888877


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +..     ++|++|||||..
T Consensus        83 ~~~-----~~d~Vih~A~~~   97 (335)
T 1rpn_A           83 IKA-----QPQEVYNLAAQS   97 (335)
T ss_dssp             HHH-----CCSEEEECCSCC
T ss_pred             HHc-----CCCEEEECcccc
Confidence            664     689999999964

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.39  E-value=6.6e-12  Score=86.79  Aligned_cols=91  Identities=16%  Similarity=0.172  Sum_probs=63.8

Q ss_pred             cEEEEecCCChHHHHHHHHHH-HhCCeEEEEecccch---------HHHHHHHhhCCCCCC-CCCccceEEEEeecCCCH
Q 033624           18 KVVMVTGASSGLGREFCLDLA-KAGCRIVAAARRVDR---------LKSLCDEINKPGMVG-SPDSVRAVAVELDVCADG   86 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~-~~g~~v~~~~r~~~~---------~~~~~~~~~~~~~~~-~~~~~~~~~~~~di~~~~   86 (115)
                      .+++|||++|+||..++++|+ ++|++|++++|+...         .+.+.+.++...... .....++.++.+|++ ++
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~   81 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVR-NE   81 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTT-CH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCC-CH
Confidence            479999999999999999999 999999999987543         333332222221000 000012778999996 78


Q ss_pred             HHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           87 ATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        87 ~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      +.+..++++    ++++|+||||||..
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~  104 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFL  104 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCC
T ss_pred             HHHHHHHHh----cCCCCEEEECCCcc
Confidence            777766553    55699999999975

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.38  E-value=1.9e-12  Score=89.23  Aligned_cols=83  Identities=16%  Similarity=0.168  Sum_probs=62.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch-----HHHHHHHhhCCCCCCCCCcc-ceEEEEeecCCCHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-----LKSLCDEINKPGMVGSPDSV-RAVAVELDVCADGATIEI   91 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~~~di~~~~~~~~~   91 (115)
                      ++++|||++|+||..+++.|+++|++|++++|+.+.     ++.....+..       ... .+.++.+|++ +.+++..
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~Dl~-d~~~~~~  100 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHN-------VNKALMKLHYADLT-DASSLRR  100 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------------CCEEEEECCTT-CHHHHHH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhcccc-------ccccceEEEECCCC-CHHHHHH
Confidence            789999999999999999999999999999997653     1111111100       012 5778899996 7888888


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++..     ++|+||||||..
T Consensus       101 ~~~~~-----~~d~Vih~A~~~  117 (381)
T 1n7h_A          101 WIDVI-----KPDEVYNLAAQS  117 (381)
T ss_dssp             HHHHH-----CCSEEEECCSCC
T ss_pred             HHHhc-----CCCEEEECCccc
Confidence            77765     789999999975

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.38  E-value=5.3e-12  Score=87.34  Aligned_cols=87  Identities=21%  Similarity=0.168  Sum_probs=62.4

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHH----------------HHHHHhhCCCCCCCCCccceEEE
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK----------------SLCDEINKPGMVGSPDSVRAVAV   78 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~   78 (115)
                      .++.+++||||+|+||..++++|+++|++|++++|......                +....+....      ..++.++
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------~~~v~~~   82 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT------GKSIELY   82 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH------CCCCEEE
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhcc------CCceEEE
Confidence            35789999999999999999999999999999987643211                0111111000      1357788


Q ss_pred             EeecCCCHHHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           79 ELDVCADGATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        79 ~~di~~~~~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .+|++ +.+++..+++..     ++|+||||||..
T Consensus        83 ~~Dl~-d~~~~~~~~~~~-----~~D~Vih~A~~~  111 (404)
T 1i24_A           83 VGDIC-DFEFLAESFKSF-----EPDSVVHFGEQR  111 (404)
T ss_dssp             ESCTT-SHHHHHHHHHHH-----CCSEEEECCSCC
T ss_pred             ECCCC-CHHHHHHHHhcc-----CCCEEEECCCCC
Confidence            99996 788888777664     699999999974

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.38  E-value=1.3e-12  Score=82.65  Aligned_cols=77  Identities=26%  Similarity=0.283  Sum_probs=60.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +++++|||++|+||+.++++|+++|++|++++|+.+....       .      ...++.++.+|++ +++++..+++  
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-------~------~~~~~~~~~~D~~-~~~~~~~~~~--   66 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-------E------GPRPAHVVVGDVL-QAADVDKTVA--   66 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-------S------SCCCSEEEESCTT-SHHHHHHHHT--
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccc-------c------cCCceEEEEecCC-CHHHHHHHHc--
Confidence            3689999999999999999999999999999998764321       0      0135778999996 7776665543  


Q ss_pred             HHHcCCccEEEeCCccCC
Q 033624           97 WEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        97 ~~~~~~id~li~naG~~~  114 (115)
                           .+|++|||||...
T Consensus        67 -----~~d~vi~~a~~~~   79 (206)
T 1hdo_A           67 -----GQDAVIVLLGTRN   79 (206)
T ss_dssp             -----TCSEEEECCCCTT
T ss_pred             -----CCCEEEECccCCC
Confidence                 5799999999753

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.37  E-value=2.6e-12  Score=87.67  Aligned_cols=85  Identities=15%  Similarity=0.170  Sum_probs=63.3

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch----HHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR----LKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      +.+++++|||++|+||..++++|+++|++|++++|+...    +..+.+.+...      ....+.++.+|++ +.+++.
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~-d~~~~~   97 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEK------QWSNFKFIQGDIR-NLDDCN   97 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHH------HHTTEEEEECCTT-SHHHHH
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccc------cCCceEEEECCCC-CHHHHH
Confidence            457899999999999999999999999999999987542    33332222110      0135778999996 777666


Q ss_pred             HHHHHHHHHcCCccEEEeCCccC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .+++       ++|+||||||..
T Consensus        98 ~~~~-------~~d~vih~A~~~  113 (352)
T 1sb8_A           98 NACA-------GVDYVLHQAALG  113 (352)
T ss_dssp             HHHT-------TCSEEEECCSCC
T ss_pred             HHhc-------CCCEEEECCccc
Confidence            6544       689999999974

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.37  E-value=8.9e-13  Score=85.60  Aligned_cols=79  Identities=16%  Similarity=0.235  Sum_probs=59.7

Q ss_pred             CCCCCcEEEEecC----------------CChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceE
Q 033624           13 HDLNEKVVMVTGA----------------SSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAV   76 (115)
Q Consensus        13 ~~~~~~~~lvtG~----------------~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (115)
                      .++.|++++||||                +++||+++|+.++++|++|++++++..        +..      +.+  + 
T Consensus         4 ~~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~--------l~~------~~g--~-   66 (226)
T 1u7z_A            4 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS--------LPT------PPF--V-   66 (226)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC--------CCC------CTT--E-
T ss_pred             cCCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc--------ccc------CCC--C-
Confidence            3578999999999                589999999999999999999887642        110      011  1 


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           77 AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        77 ~~~~di~~~~~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                       ..+|+. +   .+.+++.+.+.++++|++|||||+.
T Consensus        67 -~~~dv~-~---~~~~~~~v~~~~~~~Dili~~Aav~   98 (226)
T 1u7z_A           67 -KRVDVM-T---ALEMEAAVNASVQQQNIFIGCAAVA   98 (226)
T ss_dssp             -EEEECC-S---HHHHHHHHHHHGGGCSEEEECCBCC
T ss_pred             -eEEccC-c---HHHHHHHHHHhcCCCCEEEECCccc
Confidence             245774 3   3445666677789999999999985

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.37  E-value=3.1e-12  Score=86.84  Aligned_cols=80  Identities=20%  Similarity=0.160  Sum_probs=63.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhC-------CeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAG-------CRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADG   86 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~   86 (115)
                      .+.+++++|||++|+||..++++|+++|       ++|++++|+.+....      .       ...++.++.+|++ ++
T Consensus        11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~-------~~~~~~~~~~Dl~-d~   76 (342)
T 2hrz_A           11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------G-------FSGAVDARAADLS-AP   76 (342)
T ss_dssp             CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------T-------CCSEEEEEECCTT-ST
T ss_pred             CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------c-------cCCceeEEEcCCC-CH
Confidence            4678899999999999999999999999       799999987643211      0       1246788899996 67


Q ss_pred             HHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           87 ATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        87 ~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++..+++      +++|+||||||..
T Consensus        77 ~~~~~~~~------~~~d~vih~A~~~   97 (342)
T 2hrz_A           77 GEAEKLVE------ARPDVIFHLAAIV   97 (342)
T ss_dssp             THHHHHHH------TCCSEEEECCCCC
T ss_pred             HHHHHHHh------cCCCEEEECCccC
Confidence            66666554      4799999999964

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.37  E-value=1.3e-12  Score=83.85  Aligned_cols=72  Identities=15%  Similarity=0.207  Sum_probs=57.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      +++|||++|+||+.++++|+++|++|++++|+.+.....    ..         ..+.++.+|++ +.++         .
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----~~---------~~~~~~~~D~~-d~~~---------~   58 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR----LG---------ATVATLVKEPL-VLTE---------A   58 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----TC---------TTSEEEECCGG-GCCH---------H
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc----cC---------CCceEEecccc-cccH---------h
Confidence            589999999999999999999999999999987665432    11         35778899997 4443         2


Q ss_pred             HcCCccEEEeCCccC
Q 033624           99 AFGRVDALVNNAGIR  113 (115)
Q Consensus        99 ~~~~id~li~naG~~  113 (115)
                      .+..+|+||||||..
T Consensus        59 ~~~~~d~vi~~ag~~   73 (224)
T 3h2s_A           59 DLDSVDAVVDALSVP   73 (224)
T ss_dssp             HHTTCSEEEECCCCC
T ss_pred             hcccCCEEEECCccC
Confidence            345799999999974

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.36  E-value=2.6e-12  Score=87.35  Aligned_cols=88  Identities=17%  Similarity=0.205  Sum_probs=62.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhC--CeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      ..+.+++++|||++|+||..++++|+++|  ++|++.+|......  ...+....     ....+.++.+|++ +.+.+.
T Consensus        20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~-----~~~~~~~~~~Dl~-d~~~~~   91 (346)
T 4egb_A           20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQ-----DHPNYYFVKGEIQ-NGELLE   91 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTT-----TCTTEEEEECCTT-CHHHHH
T ss_pred             cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhc-----cCCCeEEEEcCCC-CHHHHH
Confidence            34568899999999999999999999999  66777776542110  11121111     1236889999996 888888


Q ss_pred             HHHHHHHHHcCCccEEEeCCccC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .+++..     ++|+|||+||..
T Consensus        92 ~~~~~~-----~~d~Vih~A~~~  109 (346)
T 4egb_A           92 HVIKER-----DVQVIVNFAAES  109 (346)
T ss_dssp             HHHHHH-----TCCEEEECCCCC
T ss_pred             HHHhhc-----CCCEEEECCccc
Confidence            877763     689999999975

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.35  E-value=5.1e-12  Score=86.87  Aligned_cols=84  Identities=14%  Similarity=0.143  Sum_probs=62.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch-----HHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-----LKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ++++|||++|+||..++++|+++|++|++++|+.+.     ++.+.+.+...      ....+.++.+|++ +.+++..+
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~------~~~~~~~~~~Dl~-d~~~~~~~   97 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH------IEGNMKLHYGDLT-DSTCLVKI   97 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------------CEEEEECCTT-CHHHHHHH
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc------cCCCceEEEccCC-CHHHHHHH
Confidence            689999999999999999999999999999987543     11111100000      0135778899996 78888887


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++..     ++|+||||||..
T Consensus        98 ~~~~-----~~d~vih~A~~~  113 (375)
T 1t2a_A           98 INEV-----KPTEIYNLGAQS  113 (375)
T ss_dssp             HHHH-----CCSEEEECCSCC
T ss_pred             HHhc-----CCCEEEECCCcc
Confidence            7765     689999999974

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.34  E-value=3.4e-12  Score=86.53  Aligned_cols=83  Identities=23%  Similarity=0.392  Sum_probs=59.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      +++|||++|+||+.++++|+++|++|++++|.........+.+....      ..++.++.+|++ +++++..+++.   
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dl~-~~~~~~~~~~~---   71 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG------GKHPTFVEGDIR-NEALMTEILHD---   71 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH------TSCCEEEECCTT-CHHHHHHHHHH---
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc------CCcceEEEccCC-CHHHHHHHhhc---
Confidence            58999999999999999999999999998764321111111121100      124678899996 78777776654   


Q ss_pred             HcCCccEEEeCCccC
Q 033624           99 AFGRVDALVNNAGIR  113 (115)
Q Consensus        99 ~~~~id~li~naG~~  113 (115)
                       . ++|+||||||..
T Consensus        72 -~-~~D~vih~A~~~   84 (338)
T 1udb_A           72 -H-AIDTVIHFAGLK   84 (338)
T ss_dssp             -T-TCSEEEECCSCC
T ss_pred             -c-CCCEEEECCccC
Confidence             2 699999999964

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.34  E-value=3.3e-12  Score=87.68  Aligned_cols=83  Identities=18%  Similarity=0.285  Sum_probs=63.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHh-CCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ..+.+++++|||++|+||..++++|+++ |++|++++|+.+.......            ...+.++.+|++++.+.+..
T Consensus        20 ~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~------------~~~v~~~~~Dl~~d~~~~~~   87 (372)
T 3slg_A           20 GSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK------------HERMHFFEGDITINKEWVEY   87 (372)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG------------STTEEEEECCTTTCHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc------------CCCeEEEeCccCCCHHHHHH
Confidence            3456789999999999999999999999 9999999998765432211            13688899999536777776


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++       ++|+|||+||...
T Consensus        88 ~~~-------~~d~Vih~A~~~~  103 (372)
T 3slg_A           88 HVK-------KCDVILPLVAIAT  103 (372)
T ss_dssp             HHH-------HCSEEEECBCCCC
T ss_pred             Hhc-------cCCEEEEcCcccc
Confidence            665       4799999999753

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.34  E-value=5.5e-12  Score=84.87  Aligned_cols=76  Identities=14%  Similarity=0.243  Sum_probs=61.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      ..++++|||++|+||..++++|+++|++|++++|+... ..    +            .+.++.+|++ +++++..+++.
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l------------~~~~~~~Dl~-d~~~~~~~~~~   72 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P------------NVEMISLDIM-DSQRVKKVISD   72 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T------------TEEEEECCTT-CHHHHHHHHHH
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c------------eeeEEECCCC-CHHHHHHHHHh
Confidence            46789999999999999999999999999999987653 11    1            4667889996 78888877765


Q ss_pred             HHHHcCCccEEEeCCccCC
Q 033624           96 AWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~~  114 (115)
                           +++|+||||||...
T Consensus        73 -----~~~d~vih~A~~~~   86 (321)
T 2pk3_A           73 -----IKPDYIFHLAAKSS   86 (321)
T ss_dssp             -----HCCSEEEECCSCCC
T ss_pred             -----cCCCEEEEcCcccc
Confidence                 37999999999753

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.34  E-value=3.3e-12  Score=94.28  Aligned_cols=88  Identities=20%  Similarity=0.360  Sum_probs=63.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+++++|||++|+||..++++|+++|++|++++|+........+.+....      ...+.++.+|++ +.+++..++
T Consensus         8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~v~~v~~Dl~-d~~~l~~~~   80 (699)
T 1z45_A            8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT------KHHIPFYEVDLC-DRKGLEKVF   80 (699)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH------TSCCCEEECCTT-CHHHHHHHH
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc------CCceEEEEcCCC-CHHHHHHHH
Confidence            4568899999999999999999999999999999987543222222221100      134678899996 788777766


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +..     ++|+||||||..
T Consensus        81 ~~~-----~~D~Vih~A~~~   95 (699)
T 1z45_A           81 KEY-----KIDSVIHFAGLK   95 (699)
T ss_dssp             HHS-----CCCEEEECCSCC
T ss_pred             HhC-----CCCEEEECCccc
Confidence            542     799999999975

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.33  E-value=1.5e-12  Score=83.66  Aligned_cols=73  Identities=23%  Similarity=0.398  Sum_probs=59.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCC-HHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCAD-GATIEISVQKAW   97 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~-~~~~~~~~~~~~   97 (115)
                      +++|||++|+||+.++++|+++|++|++++|+.+.....               ..+.++.+|++ + .+++..++    
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---------------~~~~~~~~D~~-d~~~~~~~~~----   61 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---------------NNVKAVHFDVD-WTPEEMAKQL----   61 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---------------TTEEEEECCTT-SCHHHHHTTT----
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---------------CCceEEEeccc-CCHHHHHHHH----
Confidence            589999999999999999999999999999987543211               35788999996 6 66665544    


Q ss_pred             HHcCCccEEEeCCccCC
Q 033624           98 EAFGRVDALVNNAGIRG  114 (115)
Q Consensus        98 ~~~~~id~li~naG~~~  114 (115)
                         .++|+||||||...
T Consensus        62 ---~~~d~vi~~ag~~~   75 (219)
T 3dqp_A           62 ---HGMDAIINVSGSGG   75 (219)
T ss_dssp             ---TTCSEEEECCCCTT
T ss_pred             ---cCCCEEEECCcCCC
Confidence               46999999999753

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.33  E-value=5e-12  Score=80.84  Aligned_cols=71  Identities=15%  Similarity=0.251  Sum_probs=57.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      +++|||++|+||+.++++|+++|++|++++|+++......              ..+.++.+|++ +.++         +
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------------~~~~~~~~D~~-d~~~---------~   57 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--------------KDINILQKDIF-DLTL---------S   57 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--------------SSSEEEECCGG-GCCH---------H
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--------------CCCeEEecccc-Chhh---------h
Confidence            5899999999999999999999999999999987654321              24678899997 4443         2


Q ss_pred             HcCCccEEEeCCccC
Q 033624           99 AFGRVDALVNNAGIR  113 (115)
Q Consensus        99 ~~~~id~li~naG~~  113 (115)
                      .+..+|+||||||..
T Consensus        58 ~~~~~d~vi~~ag~~   72 (221)
T 3ew7_A           58 DLSDQNVVVDAYGIS   72 (221)
T ss_dssp             HHTTCSEEEECCCSS
T ss_pred             hhcCCCEEEECCcCC
Confidence            235789999999974

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.32  E-value=2.3e-12  Score=82.98  Aligned_cols=74  Identities=18%  Similarity=0.216  Sum_probs=60.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      ++++|||++|+||+.++++|+++|++|++++|+.+....       .       ...+.++.+|++ +.+++..+++   
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~-------~~~~~~~~~Dl~-d~~~~~~~~~---   66 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI-------E-------NEHLKVKKADVS-SLDEVCEVCK---   66 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC-------C-------CTTEEEECCCTT-CHHHHHHHHT---
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh-------c-------cCceEEEEecCC-CHHHHHHHhc---
Confidence            589999999999999999999999999999998764321       0       135788999996 7777766554   


Q ss_pred             HHcCCccEEEeCCccC
Q 033624           98 EAFGRVDALVNNAGIR  113 (115)
Q Consensus        98 ~~~~~id~li~naG~~  113 (115)
                          .+|++|||||..
T Consensus        67 ----~~d~vi~~a~~~   78 (227)
T 3dhn_A           67 ----GADAVISAFNPG   78 (227)
T ss_dssp             ----TCSEEEECCCC-
T ss_pred             ----CCCEEEEeCcCC
Confidence                589999999864

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.31  E-value=6.3e-12  Score=85.25  Aligned_cols=85  Identities=18%  Similarity=0.198  Sum_probs=60.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      ++++++|||++|+||..++++|+++|++|+++.|+.+...+.... ....    ....++.++.+|++ +.+++..+++ 
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~----~~~~~~~~~~~Dl~-d~~~~~~~~~-   76 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHL-LDLP----KAETHLTLWKADLA-DEGSFDEAIK-   76 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHH-HTST----THHHHEEEEECCTT-STTTTHHHHT-
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHH-Hhcc----cCCCeEEEEEcCCC-CHHHHHHHHc-
Confidence            578999999999999999999999999999989987654333221 1110    00135778899996 6665555443 


Q ss_pred             HHHHcCCccEEEeCCccC
Q 033624           96 AWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~  113 (115)
                            .+|+|||+|+..
T Consensus        77 ------~~d~Vih~A~~~   88 (337)
T 2c29_D           77 ------GCTGVFHVATPM   88 (337)
T ss_dssp             ------TCSEEEECCCCC
T ss_pred             ------CCCEEEEecccc
Confidence                  579999999853

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.31  E-value=2.3e-11  Score=81.34  Aligned_cols=79  Identities=23%  Similarity=0.371  Sum_probs=60.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc-------chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-------DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATI   89 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~   89 (115)
                      +++++|||++|+||..+++.|++.|++|++++|+.       ++.+. .+.+..         ..+..+.+|++ +++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~l~~---------~~v~~v~~D~~-d~~~l   70 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEEL-IDNYQS---------LGVILLEGDIN-DHETL   70 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHH-HHHHHH---------TTCEEEECCTT-CHHHH
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHH-HHHHHh---------CCCEEEEeCCC-CHHHH
Confidence            45799999999999999999999999999999986       33332 223322         23678899995 77766


Q ss_pred             HHHHHHHHHHcCCccEEEeCCccC
Q 033624           90 EISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        90 ~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      ..+++       .+|++|||+|..
T Consensus        71 ~~~~~-------~~d~vi~~a~~~   87 (307)
T 2gas_A           71 VKAIK-------QVDIVICAAGRL   87 (307)
T ss_dssp             HHHHT-------TCSEEEECSSSS
T ss_pred             HHHHh-------CCCEEEECCccc
Confidence            65543       589999999864

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.30  E-value=2.6e-11  Score=82.67  Aligned_cols=80  Identities=18%  Similarity=0.188  Sum_probs=62.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc----hHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD----RLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .++++|||++|+||+.+++.|++.|++|++++|+.+    ..+ ..+.+..         ..+.++.+|++ +.+++..+
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~l~~---------~~v~~~~~Dl~-d~~~l~~~   78 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-IFKALED---------KGAIIVYGLIN-EQEAMEKI   78 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHHHHHH---------TTCEEEECCTT-CHHHHHHH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-HHHHHHh---------CCcEEEEeecC-CHHHHHHH
Confidence            568999999999999999999999999999999762    222 2223322         35778999995 78888777


Q ss_pred             HHHHHHHcCCccEEEeCCcc
Q 033624           93 VQKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~  112 (115)
                      +++.     ++|+|||++|.
T Consensus        79 ~~~~-----~~d~Vi~~a~~   93 (346)
T 3i6i_A           79 LKEH-----EIDIVVSTVGG   93 (346)
T ss_dssp             HHHT-----TCCEEEECCCG
T ss_pred             HhhC-----CCCEEEECCch
Confidence            6642     68999999986

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.30  E-value=8.4e-12  Score=86.14  Aligned_cols=78  Identities=14%  Similarity=0.069  Sum_probs=61.2

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      ..+++++|||++|+||..++++|+++|++|++++|+......    ..         ...+.++.+|++ +.+++..+++
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~---------~~~v~~~~~Dl~-d~~~~~~~~~   92 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT----ED---------MFCDEFHLVDLR-VMENCLKVTE   92 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC----GG---------GTCSEEEECCTT-SHHHHHHHHT
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchh----hc---------cCCceEEECCCC-CHHHHHHHhC
Confidence            356799999999999999999999999999999998654211    00         124678899996 7776666543


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                             ++|++|||||..
T Consensus        93 -------~~d~Vih~A~~~  104 (379)
T 2c5a_A           93 -------GVDHVFNLAADM  104 (379)
T ss_dssp             -------TCSEEEECCCCC
T ss_pred             -------CCCEEEECceec
Confidence                   689999999965

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.29  E-value=7.5e-12  Score=84.83  Aligned_cols=74  Identities=20%  Similarity=0.278  Sum_probs=55.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      +++|||++|+||..++++|+++|++|++++|+.+..+.    +..         ..+.++.+|++ +.+++..+++    
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~~---------~~~~~~~~Dl~-d~~~~~~~~~----   76 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----LAY---------LEPECRVAEML-DHAGLERALR----   76 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----GGG---------GCCEEEECCTT-CHHHHHHHTT----
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----hcc---------CCeEEEEecCC-CHHHHHHHHc----
Confidence            79999999999999999999999999999998764322    111         24678899996 7766665543    


Q ss_pred             HcCCccEEEeCCccC
Q 033624           99 AFGRVDALVNNAGIR  113 (115)
Q Consensus        99 ~~~~id~li~naG~~  113 (115)
                         ++|+||||||..
T Consensus        77 ---~~d~vih~a~~~   88 (342)
T 2x4g_A           77 ---GLDGVIFSAGYY   88 (342)
T ss_dssp             ---TCSEEEEC----
T ss_pred             ---CCCEEEECCccC
Confidence               689999999864

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.29  E-value=1.1e-11  Score=83.94  Aligned_cols=80  Identities=20%  Similarity=0.221  Sum_probs=59.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhC--CeEEEEecccc--hHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVD--RLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g--~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      +.+++|||++|+||..++++|+++|  ++|++++|+..  ..+.+ +.+..        ..++.++.+|++ +.+.+..+
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~~--------~~~~~~~~~Dl~-d~~~~~~~   72 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLED--------DPRYTFVKGDVA-DYELVKEL   72 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTTT--------CTTEEEEECCTT-CHHHHHHH
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhcc--------CCceEEEEcCCC-CHHHHHHH
Confidence            4579999999999999999999997  89999988642  11111 11110        235788999996 77777666


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      +       .++|+||||||..
T Consensus        73 ~-------~~~d~vih~A~~~   86 (336)
T 2hun_A           73 V-------RKVDGVVHLAAES   86 (336)
T ss_dssp             H-------HTCSEEEECCCCC
T ss_pred             h-------hCCCEEEECCCCc
Confidence            5       3689999999975

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.28  E-value=3.9e-12  Score=86.23  Aligned_cols=81  Identities=17%  Similarity=0.142  Sum_probs=59.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH--HHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS--LCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +++++|||++|+||..++++|+++|++|+++.|+.+....  ....+..        ..++.++.+|++ +.+++..+++
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~--------~~~~~~~~~Dl~-d~~~~~~~~~   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQE--------LGDLKIFRADLT-DELSFEAPIA   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGG--------GSCEEEEECCTT-TSSSSHHHHT
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCC--------CCcEEEEecCCC-ChHHHHHHHc
Confidence            6789999999999999999999999999988887653211  1112221        135778899996 5555554443


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                             .+|+|||+||..
T Consensus        80 -------~~D~Vih~A~~~   91 (338)
T 2rh8_A           80 -------GCDFVFHVATPV   91 (338)
T ss_dssp             -------TCSEEEEESSCC
T ss_pred             -------CCCEEEEeCCcc
Confidence                   579999999864

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.28  E-value=3.1e-12  Score=89.51  Aligned_cols=91  Identities=14%  Similarity=-0.002  Sum_probs=63.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc---hHHHHHHHhhCCCCC--CCCCccceEEEEeecCCCHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD---RLKSLCDEINKPGMV--GSPDSVRAVAVELDVCADGAT   88 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~~~di~~~~~~   88 (115)
                      ...+++++|||++|+||..++++|++.|++|++++|+.+   ....+.+.++.....  ......++.++.+|++ +++.
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~-d~~~  144 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFE-CMDD  144 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC----CC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCC-Cccc
Confidence            455789999999999999999999999999999999877   333333333221000  0000246889999996 5444


Q ss_pred             HHHHHHHHHHHcCCccEEEeCCccC
Q 033624           89 IEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        89 ~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      +.        ..+++|+||||||..
T Consensus       145 l~--------~~~~~d~Vih~A~~~  161 (427)
T 4f6c_A          145 VV--------LPENMDTIIHAGART  161 (427)
T ss_dssp             CC--------CSSCCSEEEECCCCC
T ss_pred             CC--------CcCCCCEEEECCccc
Confidence            44        467899999999975

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.28  E-value=7.8e-11  Score=83.78  Aligned_cols=93  Identities=23%  Similarity=0.254  Sum_probs=64.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHh---CCeEEEEecccchHHHHHHHhhCCCCCCC---------CCccceEEEEe
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKA---GCRIVAAARRVDRLKSLCDEINKPGMVGS---------PDSVRAVAVEL   80 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~---g~~v~~~~r~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~   80 (115)
                      ....+++++|||++|+||..++++|++.   |++|++++|+.+..... ..+........         ....++.++.+
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~  147 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDAR-RRLEKTFDSGDPELLRHFKELAADRLEVVAG  147 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHH-HHHHGGGCSSCHHHHHHHHHHHTTTEEEEEC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHH-HHHHHHHHhcchhhhhhhhhhccCceEEEEe
Confidence            3456899999999999999999999999   89999999987654322 22221110000         00146889999


Q ss_pred             ecCC-----CHHHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           81 DVCA-----DGATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        81 di~~-----~~~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      |+++     +.+.++.+++       ++|+||||||..
T Consensus       148 Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~  178 (478)
T 4dqv_A          148 DKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMV  178 (478)
T ss_dssp             CTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSC
T ss_pred             ECCCcccCCCHHHHHHHHc-------CCCEEEECcccc
Confidence            9952     3344444443       589999999975

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.27  E-value=4.9e-12  Score=87.19  Aligned_cols=81  Identities=17%  Similarity=0.168  Sum_probs=61.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhC-CeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .+.+++++|||++|+||..++++|+++| ++|++++|+.....   +.+..        ...+.++.+|++ +++++..+
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~---~~l~~--------~~~v~~~~~Dl~-d~~~l~~~   96 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEK---INVPD--------HPAVRFSETSIT-DDALLASL   96 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCG---GGSCC--------CTTEEEECSCTT-CHHHHHHC
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCch---hhccC--------CCceEEEECCCC-CHHHHHHH
Confidence            3567899999999999999999999999 99999998754321   11110        135778899996 66655543


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      +       .++|+||||||..
T Consensus        97 ~-------~~~d~Vih~A~~~  110 (377)
T 2q1s_A           97 Q-------DEYDYVFHLATYH  110 (377)
T ss_dssp             C-------SCCSEEEECCCCS
T ss_pred             h-------hCCCEEEECCCcc
Confidence            3       3799999999975

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.26  E-value=4e-11  Score=80.94  Aligned_cols=77  Identities=17%  Similarity=0.200  Sum_probs=60.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      ++++|||++|+||..++++|+++|++|++++|+.....   +.+.          ..+.++.+|++ +.+++..++++  
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~----------~~~~~~~~D~~-~~~~~~~~~~~--   65 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAIT----------EGAKFYNGDLR-DKAFLRDVFTQ--   65 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGSC----------TTSEEEECCTT-CHHHHHHHHHH--
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhcC----------CCcEEEECCCC-CHHHHHHHHhh--
Confidence            47999999999999999999999999999998754321   1110          25678899996 78777776654  


Q ss_pred             HHcCCccEEEeCCccC
Q 033624           98 EAFGRVDALVNNAGIR  113 (115)
Q Consensus        98 ~~~~~id~li~naG~~  113 (115)
                         .++|++||+||..
T Consensus        66 ---~~~d~vih~a~~~   78 (330)
T 2c20_A           66 ---ENIEAVMHFAADS   78 (330)
T ss_dssp             ---SCEEEEEECCCCC
T ss_pred             ---cCCCEEEECCccc
Confidence               3799999999975

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.26  E-value=2.9e-11  Score=82.51  Aligned_cols=80  Identities=24%  Similarity=0.319  Sum_probs=60.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHh-CCeEEEEecccc--hHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVD--RLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~-g~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      +++|||++|+||..++++|++. |++|++++|+..  ..+.+ ..+..        ..++.++.+|++ +.+++..++++
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~--------~~~~~~~~~Dl~-d~~~~~~~~~~   71 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDISE--------SNRYNFEHADIC-DSAEITRIFEQ   71 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTT--------CTTEEEEECCTT-CHHHHHHHHHH
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhhc--------CCCeEEEECCCC-CHHHHHHHHhh
Confidence            4899999999999999999998 799999998642  22211 11111        235788999996 88888877765


Q ss_pred             HHHHcCCccEEEeCCccC
Q 033624           96 AWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~  113 (115)
                      .     ++|+||||||..
T Consensus        72 ~-----~~d~vih~A~~~   84 (361)
T 1kew_A           72 Y-----QPDAVMHLAAES   84 (361)
T ss_dssp             H-----CCSEEEECCSCC
T ss_pred             c-----CCCEEEECCCCc
Confidence            2     799999999975

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.25  E-value=6.2e-12  Score=84.61  Aligned_cols=83  Identities=16%  Similarity=0.189  Sum_probs=56.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEec-ccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      |++++|||++|+||+.++++|+++|++|+++.| +.+..... ..+....    ....++.++.+|++ +++++..+++ 
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~----~~~~~~~~~~~Dl~-d~~~~~~~~~-   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDV-SFLTNLP----GASEKLHFFNADLS-NPDSFAAAIE-   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCC-HHHHTST----THHHHEEECCCCTT-CGGGGHHHHT-
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHH-HHHHhhh----ccCCceEEEecCCC-CHHHHHHHHc-
Confidence            578999999999999999999999999999888 54321110 0111110    00125678889996 6766665543 


Q ss_pred             HHHHcCCccEEEeCCcc
Q 033624           96 AWEAFGRVDALVNNAGI  112 (115)
Q Consensus        96 ~~~~~~~id~li~naG~  112 (115)
                            .+|+|||||+.
T Consensus        74 ------~~d~vih~A~~   84 (322)
T 2p4h_X           74 ------GCVGIFHTASP   84 (322)
T ss_dssp             ------TCSEEEECCCC
T ss_pred             ------CCCEEEEcCCc
Confidence                  57999999974

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.24  E-value=1.6e-11  Score=82.44  Aligned_cols=70  Identities=21%  Similarity=0.299  Sum_probs=44.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +++++|||++|+||..++++|+++|++|++++|+.+.           .       .   ++.+|++ +++++..+++..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~-------~---~~~~Dl~-d~~~~~~~~~~~   59 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------P-------K---FEQVNLL-DSNAVHHIIHDF   59 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------------CHHHHHHH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------C-------C---eEEecCC-CHHHHHHHHHhh
Confidence            5789999999999999999999999999999986532           0       1   5668985 677777766654


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                           ++|++|||||..
T Consensus        60 -----~~d~vih~A~~~   71 (315)
T 2ydy_A           60 -----QPHVIVHCAAER   71 (315)
T ss_dssp             -----CCSEEEECC---
T ss_pred             -----CCCEEEECCccc
Confidence                 689999999974

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.24  E-value=3.9e-11  Score=80.79  Aligned_cols=80  Identities=15%  Similarity=0.245  Sum_probs=60.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      .++++|||++|+||..+++.|+++|++|++++|+.+......+.+..         ..+.++.+|++ +.+++..+++  
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~---------~~v~~v~~Dl~-d~~~l~~a~~--   78 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS---------LGAIIVKGELD-EHEKLVELMK--   78 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH---------TTCEEEECCTT-CHHHHHHHHT--
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc---------CCCEEEEecCC-CHHHHHHHHc--
Confidence            35799999999999999999999999999999987522222222322         23678899995 7777666553  


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                           .+|++||++|..
T Consensus        79 -----~~d~vi~~a~~~   90 (318)
T 2r6j_A           79 -----KVDVVISALAFP   90 (318)
T ss_dssp             -----TCSEEEECCCGG
T ss_pred             -----CCCEEEECCchh
Confidence                 589999999853

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.23  E-value=3.2e-11  Score=80.77  Aligned_cols=76  Identities=17%  Similarity=0.195  Sum_probs=60.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHh--CCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKA--GCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +++++|||++|+||..++++|+++  |++|++++|+..... .   .           ..+.++.+|++ +.+++..+++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~---~-----------~~~~~~~~D~~-d~~~~~~~~~   65 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-V---V-----------NSGPFEVVNAL-DFNQIEHLVE   65 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-H---H-----------HSSCEEECCTT-CHHHHHHHHH
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-c---c-----------CCCceEEecCC-CHHHHHHHHh
Confidence            467999999999999999999999  899999998765421 1   1           13457889996 7887777766


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                      +.     ++|++||+||..
T Consensus        66 ~~-----~~d~vih~a~~~   79 (312)
T 2yy7_A           66 VH-----KITDIYLMAALL   79 (312)
T ss_dssp             HT-----TCCEEEECCCCC
T ss_pred             hc-----CCCEEEECCccC
Confidence            43     689999999864

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.23  E-value=1.4e-10  Score=77.41  Aligned_cols=77  Identities=19%  Similarity=0.241  Sum_probs=60.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhC-CeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .++++|||++|+||+.++++|+++| ++|++++|+++....  ..+..         ..+..+.+|++ +++++..+++ 
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~---------~~~~~~~~D~~-d~~~l~~~~~-   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL---------QGAEVVQGDQD-DQVIMELALN-   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH---------TTCEEEECCTT-CHHHHHHHHT-
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH---------CCCEEEEecCC-CHHHHHHHHh-
Confidence            5789999999999999999999999 999999998765431  22221         23667889995 7777665543 


Q ss_pred             HHHHcCCccEEEeCCcc
Q 033624           96 AWEAFGRVDALVNNAGI  112 (115)
Q Consensus        96 ~~~~~~~id~li~naG~  112 (115)
                            .+|++|||+|.
T Consensus        72 ------~~d~vi~~a~~   82 (299)
T 2wm3_A           72 ------GAYATFIVTNY   82 (299)
T ss_dssp             ------TCSEEEECCCH
T ss_pred             ------cCCEEEEeCCC
Confidence                  58999999985

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.23  E-value=6.1e-11  Score=79.89  Aligned_cols=80  Identities=11%  Similarity=0.154  Sum_probs=60.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc-c----hHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-D----RLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .++++|||++|+||..+++.|+++|++|++++|+. +    ........+..         ..+..+.+|++ +.+++..
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~---------~~v~~v~~D~~-d~~~l~~   73 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS---------MGVTIIEGEME-EHEKMVS   73 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH---------TTCEEEECCTT-CHHHHHH
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc---------CCcEEEEecCC-CHHHHHH
Confidence            35699999999999999999999999999999986 2    12222222321         24678899995 7776666


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++       .+|++|||+|..
T Consensus        74 a~~-------~~d~vi~~a~~~   88 (321)
T 3c1o_A           74 VLK-------QVDIVISALPFP   88 (321)
T ss_dssp             HHT-------TCSEEEECCCGG
T ss_pred             HHc-------CCCEEEECCCcc
Confidence            543       589999999863

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.22  E-value=1.3e-10  Score=77.96  Aligned_cols=80  Identities=13%  Similarity=0.122  Sum_probs=60.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch----HHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR----LKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .++++|||++|+||..+++.|+++|++|++++|+.+.    ..+....+..         ..+..+.+|++ +++++..+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~---------~~~~~~~~D~~-d~~~l~~~   73 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQ---------LGAKLIEASLD-DHQRLVDA   73 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHT---------TTCEEECCCSS-CHHHHHHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHh---------CCeEEEeCCCC-CHHHHHHH
Confidence            3579999999999999999999999999999998532    1111222322         24678899995 77766655


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      ++       .+|++||++|..
T Consensus        74 ~~-------~~d~vi~~a~~~   87 (313)
T 1qyd_A           74 LK-------QVDVVISALAGG   87 (313)
T ss_dssp             HT-------TCSEEEECCCCS
T ss_pred             Hh-------CCCEEEECCccc
Confidence            43       589999999875

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.21  E-value=4.5e-11  Score=80.99  Aligned_cols=76  Identities=17%  Similarity=0.201  Sum_probs=58.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHh-CCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      +++|||++|+||..++++|+++ |++|++++|+.+....    +..        ...+.++.+|+++..+.++.+++   
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~----~~~--------~~~~~~~~~D~~~~~~~~~~~~~---   66 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR----FLN--------HPHFHFVEGDISIHSEWIEYHVK---   66 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGG----GTT--------CTTEEEEECCTTTCSHHHHHHHH---
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHH----hhc--------CCCeEEEeccccCcHHHHHhhcc---
Confidence            6999999999999999999998 8999999998765432    111        13577889999633455555443   


Q ss_pred             HHcCCccEEEeCCccC
Q 033624           98 EAFGRVDALVNNAGIR  113 (115)
Q Consensus        98 ~~~~~id~li~naG~~  113 (115)
                          ++|++|||||..
T Consensus        67 ----~~d~vih~A~~~   78 (345)
T 2bll_A           67 ----KCDVVLPLVAIA   78 (345)
T ss_dssp             ----HCSEEEECBCCC
T ss_pred             ----CCCEEEEccccc
Confidence                479999999975

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.21  E-value=3.2e-11  Score=80.01  Aligned_cols=74  Identities=24%  Similarity=0.280  Sum_probs=58.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHHh--CCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKA--GCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      ++++|||++|+||..++++|+++  |++|++++|+.+....+..             ..+.++.+|++ +++++..+++ 
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~-------------~~~~~~~~D~~-d~~~l~~~~~-   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD-------------QGVEVRHGDYN-QPESLQKAFA-   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH-------------TTCEEEECCTT-CHHHHHHHTT-
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh-------------cCCeEEEeccC-CHHHHHHHHh-
Confidence            36899999999999999999998  9999999998765543221             23667889996 7766665443 


Q ss_pred             HHHHcCCccEEEeCCcc
Q 033624           96 AWEAFGRVDALVNNAGI  112 (115)
Q Consensus        96 ~~~~~~~id~li~naG~  112 (115)
                            .+|++||+||.
T Consensus        66 ------~~d~vi~~a~~   76 (287)
T 2jl1_A           66 ------GVSKLLFISGP   76 (287)
T ss_dssp             ------TCSEEEECCCC
T ss_pred             ------cCCEEEEcCCC
Confidence                  58999999985

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.21  E-value=2.7e-11  Score=80.52  Aligned_cols=74  Identities=18%  Similarity=0.175  Sum_probs=58.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHh-CCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      +++|||++|+||+.++++|.+. |++|++++|+.+....    +.         ...+.++.+|++ +++++..++    
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~----~~---------~~~v~~~~~D~~-d~~~l~~~~----   63 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD----DW---------RGKVSVRQLDYF-NQESMVEAF----   63 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCG----GG---------BTTBEEEECCTT-CHHHHHHHT----
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHH----hh---------hCCCEEEEcCCC-CHHHHHHHH----
Confidence            4899999999999999999988 9999999998765322    11         135788999995 777666554    


Q ss_pred             HHcCCccEEEeCCccC
Q 033624           98 EAFGRVDALVNNAGIR  113 (115)
Q Consensus        98 ~~~~~id~li~naG~~  113 (115)
                         ..+|++|||||..
T Consensus        64 ---~~~d~vi~~a~~~   76 (289)
T 3e48_A           64 ---KGMDTVVFIPSII   76 (289)
T ss_dssp             ---TTCSEEEECCCCC
T ss_pred             ---hCCCEEEEeCCCC
Confidence               3689999999875

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.20  E-value=1.7e-10  Score=77.16  Aligned_cols=80  Identities=19%  Similarity=0.239  Sum_probs=60.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchH-----HHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRL-----KSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .++++|||++|+||..+++.|++.|++|++++|+.+..     .+..+.+..         ..+..+.+|++ +++++..
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~---------~~v~~v~~D~~-d~~~l~~   73 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA---------SGANIVHGSID-DHASLVE   73 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHT---------TTCEEECCCTT-CHHHHHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHh---------CCCEEEEeccC-CHHHHHH
Confidence            35799999999999999999999999999999985421     112223332         24678899995 7777766


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++       .+|++||++|..
T Consensus        74 ~~~-------~~d~vi~~a~~~   88 (308)
T 1qyc_A           74 AVK-------NVDVVISTVGSL   88 (308)
T ss_dssp             HHH-------TCSEEEECCCGG
T ss_pred             HHc-------CCCEEEECCcch
Confidence            554       489999999863

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.20  E-value=4.1e-11  Score=81.48  Aligned_cols=81  Identities=15%  Similarity=0.153  Sum_probs=56.6

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      +..+.+++++|||++|+||..++++|+++|++|++++|+..........+..        ..++.++.+|++ +.     
T Consensus        22 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~D~~-~~-----   87 (343)
T 2b69_A           22 HMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIG--------HENFELINHDVV-EP-----   87 (343)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTT--------CTTEEEEECCTT-SC-----
T ss_pred             ccccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhcc--------CCceEEEeCccC-Ch-----
Confidence            3456788999999999999999999999999999999865422111111111        135778889996 32     


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                             .+.++|+||||||..
T Consensus        88 -------~~~~~d~vih~A~~~  102 (343)
T 2b69_A           88 -------LYIEVDQIYHLASPA  102 (343)
T ss_dssp             -------CCCCCSEEEECCSCC
T ss_pred             -------hhcCCCEEEECcccc
Confidence                   145799999999864

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.19  E-value=1.3e-10  Score=77.98  Aligned_cols=73  Identities=22%  Similarity=0.198  Sum_probs=56.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +++++|||++|+||..+++.|+++|++|++++|+.....     +           ..+.++.+|++  .+++..+++  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~-----------~~~~~~~~Dl~--~~~~~~~~~--   61 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-----I-----------NDYEYRVSDYT--LEDLINQLN--   61 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------------------CCEEEECCCC--HHHHHHHTT--
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-----C-----------CceEEEEcccc--HHHHHHhhc--
Confidence            468999999999999999999999999999999843221     1           14668889994  655555443  


Q ss_pred             HHHcCCccEEEeCCccCC
Q 033624           97 WEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        97 ~~~~~~id~li~naG~~~  114 (115)
                           ++|++||+||...
T Consensus        62 -----~~d~Vih~a~~~~   74 (311)
T 3m2p_A           62 -----DVDAVVHLAATRG   74 (311)
T ss_dssp             -----TCSEEEECCCCCC
T ss_pred             -----CCCEEEEccccCC
Confidence                 7899999999753

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.19  E-value=4.2e-11  Score=80.38  Aligned_cols=76  Identities=17%  Similarity=0.231  Sum_probs=58.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      +++|||++|+||+.++++|+++|++|++++|......   ..+.          ..+.++.+|++ +++++..++++.  
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~---~~~~----------~~~~~~~~Dl~-~~~~~~~~~~~~--   65 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR---ENVP----------KGVPFFRVDLR-DKEGVERAFREF--   65 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG---GGSC----------TTCCEECCCTT-CHHHHHHHHHHH--
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch---hhcc----------cCeEEEECCCC-CHHHHHHHHHhc--
Confidence            5899999999999999999999999999988533211   0010          23567889996 788887776642  


Q ss_pred             HcCCccEEEeCCccC
Q 033624           99 AFGRVDALVNNAGIR  113 (115)
Q Consensus        99 ~~~~id~li~naG~~  113 (115)
                         .+|++||+||..
T Consensus        66 ---~~d~vi~~a~~~   77 (311)
T 2p5y_A           66 ---RPTHVSHQAAQA   77 (311)
T ss_dssp             ---CCSEEEECCSCC
T ss_pred             ---CCCEEEECcccc
Confidence               689999999864

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.18  E-value=4.5e-11  Score=81.23  Aligned_cols=79  Identities=20%  Similarity=0.231  Sum_probs=58.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHHh--CCeEEEEecccch-HHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKA--GCRIVAAARRVDR-LKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      ++++|||++|+||..++++|+++  |++|++++|+... .......+.         ..++.++.+|++ +++.+..+++
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~---------~~~~~~~~~Dl~-d~~~~~~~~~   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL---------GDRVELVVGDIA-DAELVDKLAA   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC---------SSSEEEEECCTT-CHHHHHHHHT
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhc---------cCCeEEEECCCC-CHHHHHHHhh
Confidence            57999999999999999999999  8999999986421 111111111         135788999996 7776665543


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                             .+|+||||||..
T Consensus        75 -------~~d~vih~A~~~   86 (348)
T 1oc2_A           75 -------KADAIVHYAAES   86 (348)
T ss_dssp             -------TCSEEEECCSCC
T ss_pred             -------cCCEEEECCccc
Confidence                   459999999975

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=99.17  E-value=3.3e-11  Score=78.47  Aligned_cols=78  Identities=13%  Similarity=0.147  Sum_probs=56.9

Q ss_pred             CCcEEEEecC----------------CChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEE
Q 033624           16 NEKVVMVTGA----------------SSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVE   79 (115)
Q Consensus        16 ~~~~~lvtG~----------------~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (115)
                      .|++++||||                +|++|.++|+.++++|+.|++++|+.+..        ...      +..+..  
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~--------~~~------~~~~~~--   65 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALK--------PEP------HPNLSI--   65 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCC--------CCC------CTTEEE--
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccc--------ccC------CCCeEE--
Confidence            4899999999                78899999999999999999999875310        000      012222  


Q ss_pred             eecCCCHHHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           80 LDVCADGATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        80 ~di~~~~~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .++.    +.+..++.+...++++|++|+|||+.
T Consensus        66 ~~v~----s~~em~~~v~~~~~~~Dili~aAAvs   95 (232)
T 2gk4_A           66 REIT----NTKDLLIEMQERVQDYQVLIHSMAVS   95 (232)
T ss_dssp             EECC----SHHHHHHHHHHHGGGCSEEEECSBCC
T ss_pred             EEHh----HHHHHHHHHHHhcCCCCEEEEcCccc
Confidence            3442    35556667777788999999999985

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.17  E-value=1.1e-11  Score=81.75  Aligned_cols=73  Identities=18%  Similarity=0.236  Sum_probs=58.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      .++++|||++|+||+.++++|+++|++|++++|+....      +   .       ..+.++.+|++ +++.+..+++  
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------~---~-------~~~~~~~~Dl~-d~~~~~~~~~--   62 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA------A---E-------AHEEIVACDLA-DAQAVHDLVK--   62 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC------C---C-------TTEEECCCCTT-CHHHHHHHHT--
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc------c---C-------CCccEEEccCC-CHHHHHHHHc--
Confidence            36799999999999999999999999999999986531      0   0       23578889996 7776666543  


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                           .+|+||||||..
T Consensus        63 -----~~d~vi~~a~~~   74 (267)
T 3ay3_A           63 -----DCDGIIHLGGVS   74 (267)
T ss_dssp             -----TCSEEEECCSCC
T ss_pred             -----CCCEEEECCcCC
Confidence                 589999999874

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.16  E-value=7.9e-11  Score=77.98  Aligned_cols=73  Identities=23%  Similarity=0.299  Sum_probs=56.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHh--CCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKA--GCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +++|||++|+||..++++|+++  |++|++++|+++..+....             ..+.++.+|++ +++++..++   
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~-------------~~~~~~~~D~~-d~~~~~~~~---   63 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA-------------QGITVRQADYG-DEAALTSAL---   63 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH-------------TTCEEEECCTT-CHHHHHHHT---
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc-------------CCCeEEEcCCC-CHHHHHHHH---
Confidence            3799999999999999999998  9999999998765443221             23667889996 776665544   


Q ss_pred             HHHcCCccEEEeCCcc
Q 033624           97 WEAFGRVDALVNNAGI  112 (115)
Q Consensus        97 ~~~~~~id~li~naG~  112 (115)
                          ..+|++||+||.
T Consensus        64 ----~~~d~vi~~a~~   75 (286)
T 2zcu_A           64 ----QGVEKLLLISSS   75 (286)
T ss_dssp             ----TTCSEEEECC--
T ss_pred             ----hCCCEEEEeCCC
Confidence                358999999985

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.15  E-value=2.7e-11  Score=82.74  Aligned_cols=84  Identities=17%  Similarity=0.230  Sum_probs=57.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhC-CeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .+.+++++|||++|+||..++++|+++| ++|++++|+.....     +....        .+. +.+|++ +.+.++.+
T Consensus        43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-----~~~~~--------~~~-~~~d~~-~~~~~~~~  107 (357)
T 2x6t_A           43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-----FVNLV--------DLN-IADYMD-KEDFLIQI  107 (357)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-----GGGTT--------TSC-CSEEEE-HHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-----hhccc--------Cce-EeeecC-cHHHHHHH
Confidence            3557899999999999999999999999 89999998765321     11110        111 567885 66666655


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++.  ..++++|+||||||...
T Consensus       108 ~~~--~~~~~~d~Vih~A~~~~  127 (357)
T 2x6t_A          108 MAG--EEFGDVEAIFHEGACSS  127 (357)
T ss_dssp             HTT--CCCSSCCEEEECCSCCC
T ss_pred             Hhh--cccCCCCEEEECCcccC
Confidence            542  12457999999999753

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.15  E-value=1.7e-10  Score=78.18  Aligned_cols=78  Identities=19%  Similarity=0.215  Sum_probs=57.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHh---C---CeEEEEecccch--HHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKA---G---CRIVAAARRVDR--LKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~---g---~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      +++|||++|+||..++++|+++   |   ++|++++|+...  ... .+.+..        ..++.++.+|++ +++++.
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~-~~~~~~--------~~~~~~~~~Dl~-d~~~~~   71 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRAN-LAPVDA--------DPRLRFVHGDIR-DAGLLA   71 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGG-GGGGTT--------CTTEEEEECCTT-CHHHHH
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhh-hhhccc--------CCCeEEEEcCCC-CHHHHH
Confidence            5899999999999999999997   7   899999986421  111 111111        135788999996 776666


Q ss_pred             HHHHHHHHHcCCccEEEeCCccC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .++       .++|++|||||..
T Consensus        72 ~~~-------~~~d~Vih~A~~~   87 (337)
T 1r6d_A           72 REL-------RGVDAIVHFAAES   87 (337)
T ss_dssp             HHT-------TTCCEEEECCSCC
T ss_pred             HHh-------cCCCEEEECCCcc
Confidence            554       5799999999974

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.14  E-value=1.3e-10  Score=77.20  Aligned_cols=64  Identities=19%  Similarity=0.358  Sum_probs=53.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      ..++++|||++|+||..++++|+++|++|++++|+                            .+|++ +.+++..+++.
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------------~~Dl~-d~~~~~~~~~~   61 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------------------DLDIT-NVLAVNKFFNE   61 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------------------TCCTT-CHHHHHHHHHH
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc----------------------------cCCCC-CHHHHHHHHHh
Confidence            46789999999999999999999999999999875                            15885 77777777665


Q ss_pred             HHHHcCCccEEEeCCccC
Q 033624           96 AWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~  113 (115)
                      .     ++|++|||||..
T Consensus        62 ~-----~~d~vih~A~~~   74 (292)
T 1vl0_A           62 K-----KPNVVINCAAHT   74 (292)
T ss_dssp             H-----CCSEEEECCCCC
T ss_pred             c-----CCCEEEECCccC
Confidence            4     689999999974

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.13  E-value=7.1e-11  Score=80.60  Aligned_cols=78  Identities=15%  Similarity=0.164  Sum_probs=60.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhC-----CeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAG-----CRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g-----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      +++++|||++|+||..++++|+++|     ++|++++|+.....     +.         ..++.++.+|++ +.+++..
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~~---------~~~~~~~~~Dl~-d~~~~~~   65 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----HE---------DNPINYVQCDIS-DPDDSQA   65 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----CC---------SSCCEEEECCTT-SHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----cc---------cCceEEEEeecC-CHHHHHH
Confidence            4689999999999999999999999     99999999865422     10         135778899996 7776665


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      +++.    .+++|++||+||..
T Consensus        66 ~~~~----~~~~d~vih~a~~~   83 (364)
T 2v6g_A           66 KLSP----LTDVTHVFYVTWAN   83 (364)
T ss_dssp             HHTT----CTTCCEEEECCCCC
T ss_pred             HHhc----CCCCCEEEECCCCC
Confidence            5432    23499999999874

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.12  E-value=1.7e-11  Score=78.17  Aligned_cols=71  Identities=15%  Similarity=0.107  Sum_probs=55.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC--eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++++++|||++|+||..++++|+++|+  +|++++|+.+.        .         ..++.++.+|++ +++++..+ 
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~--------~---------~~~~~~~~~D~~-~~~~~~~~-   64 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA--------E---------HPRLDNPVGPLA-ELLPQLDG-   64 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC--------C---------CTTEECCBSCHH-HHGGGCCS-
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc--------c---------CCCceEEecccc-CHHHHHHh-
Confidence            367899999999999999999999998  99999998764        0         124667778885 44433322 


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                            +  +|++|||||..
T Consensus        65 ------~--~d~vi~~a~~~   76 (215)
T 2a35_A           65 ------S--IDTAFCCLGTT   76 (215)
T ss_dssp             ------C--CSEEEECCCCC
T ss_pred             ------h--hcEEEECeeec
Confidence                  2  89999999864

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.11  E-value=2.1e-10  Score=84.38  Aligned_cols=81  Identities=16%  Similarity=0.178  Sum_probs=60.1

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHh-CCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      +.+++++|||++|+||..++++|+++ |++|++++|+.+....    +..        ..++.++.+|+++..+.+..++
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~----~~~--------~~~v~~v~~Dl~d~~~~~~~~~  380 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR----FLN--------HPHFHFVEGDISIHSEWIEYHV  380 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGG----GTT--------CTTEEEEECCTTTCHHHHHHHH
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhh----hcc--------CCceEEEECCCCCcHHHHHHhh
Confidence            46789999999999999999999998 8999999998754322    111        1357788999963333344444


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +       ++|++|||||...
T Consensus       381 ~-------~~D~Vih~Aa~~~  394 (660)
T 1z7e_A          381 K-------KCDVVLPLVAIAT  394 (660)
T ss_dssp             H-------HCSEEEECCCCCC
T ss_pred             c-------CCCEEEECceecC
Confidence            3       4799999999753

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.11  E-value=9.9e-10  Score=75.37  Aligned_cols=79  Identities=14%  Similarity=0.151  Sum_probs=60.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEee-cCCCHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELD-VCADGATIEISVQK   95 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-i~~~~~~~~~~~~~   95 (115)
                      +++++|||++|+||..+++.|+++|++|++++|+.+...  .+.+...        ..+..+.+| ++ +++++..+++ 
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~~--------~~v~~v~~D~l~-d~~~l~~~~~-   72 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQAI--------PNVTLFQGPLLN-NVPLMDTLFE-   72 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHTS--------TTEEEEESCCTT-CHHHHHHHHT-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhhc--------CCcEEEECCccC-CHHHHHHHHh-
Confidence            568999999999999999999999999999999877652  1223221        246788999 85 7777666543 


Q ss_pred             HHHHcCCccEEEeCCccC
Q 033624           96 AWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~  113 (115)
                            .+|++|+|++..
T Consensus        73 ------~~d~Vi~~a~~~   84 (352)
T 1xgk_A           73 ------GAHLAFINTTSQ   84 (352)
T ss_dssp             ------TCSEEEECCCST
T ss_pred             ------cCCEEEEcCCCC
Confidence                  579999998753

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.10  E-value=2e-10  Score=77.14  Aligned_cols=71  Identities=28%  Similarity=0.369  Sum_probs=56.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHh--CCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKA--GCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +++|||++|+||..++++|+++  |++|++++|+.....                  .+.++.+|++ +.+++..++++ 
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~------------------~~~~~~~D~~-d~~~~~~~~~~-   60 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG------------------GIKFITLDVS-NRDEIDRAVEK-   60 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT------------------TCCEEECCTT-CHHHHHHHHHH-
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc------------------CceEEEecCC-CHHHHHHHHhh-
Confidence            3899999999999999999998  889999988754311                  2446789996 78877777664 


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                          .++|++||+||..
T Consensus        61 ----~~~d~vih~a~~~   73 (317)
T 3ajr_A           61 ----YSIDAIFHLAGIL   73 (317)
T ss_dssp             ----TTCCEEEECCCCC
T ss_pred             ----cCCcEEEECCccc
Confidence                2799999999864

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.09  E-value=6.9e-10  Score=73.55  Aligned_cols=71  Identities=17%  Similarity=0.201  Sum_probs=57.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      .++++|||+ |+||..+++.|+++|++|++++|+.+.......             ..+.++.+|++ +.+         
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------------~~~~~~~~D~~-d~~---------   60 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-------------SGAEPLLWPGE-EPS---------   60 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-------------TTEEEEESSSS-CCC---------
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-------------CCCeEEEeccc-ccc---------
Confidence            368999998 999999999999999999999999876654332             24778889996 421         


Q ss_pred             HHHcCCccEEEeCCccCC
Q 033624           97 WEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        97 ~~~~~~id~li~naG~~~  114 (115)
                         ...+|++||+||...
T Consensus        61 ---~~~~d~vi~~a~~~~   75 (286)
T 3ius_A           61 ---LDGVTHLLISTAPDS   75 (286)
T ss_dssp             ---CTTCCEEEECCCCBT
T ss_pred             ---cCCCCEEEECCCccc
Confidence               457899999998753

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.09  E-value=1e-09  Score=63.61  Aligned_cols=75  Identities=20%  Similarity=0.287  Sum_probs=57.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhC-CeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      .+++++|+|+ |++|..+++.|.+.| ++|++++|+++..+...    .         ..+..+.+|++ +.+.+...+ 
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~---------~~~~~~~~d~~-~~~~~~~~~-   67 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R---------MGVATKQVDAK-DEAGLAKAL-   67 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T---------TTCEEEECCTT-CHHHHHHHT-
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h---------CCCcEEEecCC-CHHHHHHHH-
Confidence            3578999999 999999999999999 88999999887665543    1         13456788985 665554433 


Q ss_pred             HHHHHcCCccEEEeCCcc
Q 033624           95 KAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~  112 (115)
                            ..+|++|+++|.
T Consensus        68 ------~~~d~vi~~~~~   79 (118)
T 3ic5_A           68 ------GGFDAVISAAPF   79 (118)
T ss_dssp             ------TTCSEEEECSCG
T ss_pred             ------cCCCEEEECCCc
Confidence                  378999999875

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=99.08  E-value=8.2e-11  Score=72.48  Aligned_cols=77  Identities=16%  Similarity=0.079  Sum_probs=59.8

Q ss_pred             hHHHHHHHHHHHhCCeEEEEecccchHH---HHHHHhhCCCCCCCCCccceEEEEeecCCCH--HHHHHHHHHHHHHcCC
Q 033624           28 GLGREFCLDLAKAGCRIVAAARRVDRLK---SLCDEINKPGMVGSPDSVRAVAVELDVCADG--ATIEISVQKAWEAFGR  102 (115)
Q Consensus        28 giG~~~a~~l~~~g~~v~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~--~~~~~~~~~~~~~~~~  102 (115)
                      -++.+.++.|++.|++|++..|+.....   +..+.++..+       .+...+.+|++ ++  ++++.+++.+.+.+|+
T Consensus        27 ~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G-------~~~~~i~~Dv~-~~~~~~v~~~~~~i~~~~G~   98 (157)
T 3gxh_A           27 LPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAG-------MDYVYIPVDWQ-NPKVEDVEAFFAAMDQHKGK   98 (157)
T ss_dssp             CCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTT-------CEEEECCCCTT-SCCHHHHHHHHHHHHHTTTS
T ss_pred             CCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcC-------CeEEEecCCCC-CCCHHHHHHHHHHHHhcCCC
Confidence            4668999999999999999888654322   1233444333       56788889996 67  8999999999888999


Q ss_pred             ccEEEeCCccC
Q 033624          103 VDALVNNAGIR  113 (115)
Q Consensus       103 id~li~naG~~  113 (115)
                       |+||||||+.
T Consensus        99 -dVLVnnAgg~  108 (157)
T 3gxh_A           99 -DVLVHCLANY  108 (157)
T ss_dssp             -CEEEECSBSH
T ss_pred             -CEEEECCCCC
Confidence             9999999963

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.07  E-value=7.4e-10  Score=72.82  Aligned_cols=67  Identities=27%  Similarity=0.360  Sum_probs=55.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      +++|||++|+||..++++|++ |++|++++|+...        .  .       .    +.+|++ +++++..+++..  
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~--------~--~-------~----~~~Dl~-~~~~~~~~~~~~--   56 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEI--------Q--G-------G----YKLDLT-DFPRLEDFIIKK--   56 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCC--------T--T-------C----EECCTT-SHHHHHHHHHHH--
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcC--------C--C-------C----ceeccC-CHHHHHHHHHhc--
Confidence            589999999999999999995 8999999988631        0  0       1    779995 888888877764  


Q ss_pred             HcCCccEEEeCCccC
Q 033624           99 AFGRVDALVNNAGIR  113 (115)
Q Consensus        99 ~~~~id~li~naG~~  113 (115)
                         ++|++|||||..
T Consensus        57 ---~~d~vi~~a~~~   68 (273)
T 2ggs_A           57 ---RPDVIINAAAMT   68 (273)
T ss_dssp             ---CCSEEEECCCCC
T ss_pred             ---CCCEEEECCccc
Confidence               689999999975

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.07  E-value=5.5e-11  Score=79.02  Aligned_cols=71  Identities=20%  Similarity=0.265  Sum_probs=56.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +++++||| +|+||..+++.|+++|++|++++|+.+..                 ...+.++.+|++ +.+.+..+++  
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----------------~~~~~~~~~Dl~-d~~~~~~~~~--   61 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-----------------PAGVQTLIADVT-RPDTLASIVH--   61 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-----------------CTTCCEEECCTT-CGGGCTTGGG--
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------------ccCCceEEccCC-ChHHHHHhhc--
Confidence            46799999 59999999999999999999999986541                 135678899996 6665555443  


Q ss_pred             HHHcCCccEEEeCCcc
Q 033624           97 WEAFGRVDALVNNAGI  112 (115)
Q Consensus        97 ~~~~~~id~li~naG~  112 (115)
                          +++|++||+||.
T Consensus        62 ----~~~d~vih~a~~   73 (286)
T 3gpi_A           62 ----LRPEILVYCVAA   73 (286)
T ss_dssp             ----GCCSEEEECHHH
T ss_pred             ----CCCCEEEEeCCC
Confidence                369999999975

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.06  E-value=6.8e-10  Score=74.62  Aligned_cols=64  Identities=19%  Similarity=0.228  Sum_probs=53.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +++++|||++|+||..++++|+++|++|+++.|+.                           .+|++ +.+++..+++..
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------------------~~D~~-d~~~~~~~~~~~   54 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------------ELNLL-DSRAVHDFFASE   54 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------------TCCTT-CHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------------------cCCcc-CHHHHHHHHHhc
Confidence            56899999999999999999999999998877652                           15885 777777776653


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                           ++|+|||+||..
T Consensus        55 -----~~d~vih~a~~~   66 (321)
T 1e6u_A           55 -----RIDQVYLAAAKV   66 (321)
T ss_dssp             -----CCSEEEECCCCC
T ss_pred             -----CCCEEEEcCeec
Confidence                 689999999975

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.06  E-value=2.3e-10  Score=75.92  Aligned_cols=62  Identities=23%  Similarity=0.352  Sum_probs=52.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      +++|||++|+||..+++.|+++|++|++++|.                            .+|++ +.+.+..+++..  
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------------~~D~~-d~~~~~~~~~~~--   55 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------------------LLDIT-NISQVQQVVQEI--   55 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------------------TSCTT-CHHHHHHHHHHH--
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------------------ccCCC-CHHHHHHHHHhc--
Confidence            79999999999999999999999999999871                            15785 788887777664  


Q ss_pred             HcCCccEEEeCCccCC
Q 033624           99 AFGRVDALVNNAGIRG  114 (115)
Q Consensus        99 ~~~~id~li~naG~~~  114 (115)
                         ++|++||+||...
T Consensus        56 ---~~d~vi~~a~~~~   68 (287)
T 3sc6_A           56 ---RPHIIIHCAAYTK   68 (287)
T ss_dssp             ---CCSEEEECCCCCC
T ss_pred             ---CCCEEEECCcccC
Confidence               7899999999753

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=99.05  E-value=2.3e-09  Score=75.00  Aligned_cols=83  Identities=17%  Similarity=0.198  Sum_probs=67.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhC---CeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAG---CRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      ++++|+|+ |++|+.+++.|++.|   ..|++++|+.++.+++.+.+...+      +.++..+.+|++ +.++++.+++
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~------~~~~~~~~~D~~-d~~~l~~~l~   73 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG------YGEIDITTVDAD-SIEELVALIN   73 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT------CCCCEEEECCTT-CHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc------CCceEEEEecCC-CHHHHHHHHH
Confidence            46889998 899999999999998   489999999999888888775422      135778889995 8888888877


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                      +.     ++|+||||+|..
T Consensus        74 ~~-----~~DvVin~ag~~   87 (405)
T 4ina_A           74 EV-----KPQIVLNIALPY   87 (405)
T ss_dssp             HH-----CCSEEEECSCGG
T ss_pred             hh-----CCCEEEECCCcc
Confidence            65     689999999853

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.03  E-value=4.6e-11  Score=80.09  Aligned_cols=73  Identities=16%  Similarity=0.150  Sum_probs=54.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      ++++|||++|+||+.++++|+++|++|++++|+.+......             ...+.++.+|++ +.+ +...     
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------------~~~~~~~~~Dl~-d~~-~~~~-----   60 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-------------NPSAELHVRDLK-DYS-WGAG-----   60 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-------------CTTSEEECCCTT-STT-TTTT-----
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-------------CCCceEEECccc-cHH-HHhh-----
Confidence            36999999999999999999999999999998765422111             135678889996 543 3322     


Q ss_pred             HHcCCccEEEeCCccC
Q 033624           98 EAFGRVDALVNNAGIR  113 (115)
Q Consensus        98 ~~~~~id~li~naG~~  113 (115)
                        +.. |++|||||..
T Consensus        61 --~~~-d~vih~A~~~   73 (312)
T 3ko8_A           61 --IKG-DVVFHFAANP   73 (312)
T ss_dssp             --CCC-SEEEECCSSC
T ss_pred             --cCC-CEEEECCCCC
Confidence              223 9999999853

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=98.98  E-value=1.1e-09  Score=72.94  Aligned_cols=64  Identities=22%  Similarity=0.255  Sum_probs=53.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      +++|||++|+||..++++|+ +|++|++++|+..                        .+.+|++ +.+++..+++..  
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~------------------------~~~~D~~-d~~~~~~~~~~~--   53 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK------------------------EFCGDFS-NPKGVAETVRKL--   53 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS------------------------SSCCCTT-CHHHHHHHHHHH--
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc------------------------cccccCC-CHHHHHHHHHhc--
Confidence            58999999999999999999 8999999988751                        2347885 787777776653  


Q ss_pred             HcCCccEEEeCCccC
Q 033624           99 AFGRVDALVNNAGIR  113 (115)
Q Consensus        99 ~~~~id~li~naG~~  113 (115)
                         ++|++||+||..
T Consensus        54 ---~~d~vih~a~~~   65 (299)
T 1n2s_A           54 ---RPDVIVNAAAHT   65 (299)
T ss_dssp             ---CCSEEEECCCCC
T ss_pred             ---CCCEEEECcccC
Confidence               689999999875

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=98.98  E-value=3.1e-10  Score=81.13  Aligned_cols=89  Identities=15%  Similarity=0.008  Sum_probs=61.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch---HHHHHHHhhCCCCC--CCCCccceEEEEeecCCCHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR---LKSLCDEINKPGMV--GSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      ..++++|||++|+||..++++|.+.|++|++++|+...   ...+.+.++.....  ......++.++.+|++ +++.+.
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~-d~~~l~  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFE-CMDDVV  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTT-BCSSCC
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCc-ccccCC
Confidence            35799999999999999999999999999999998763   22333322211000  0001246889999996 533333


Q ss_pred             HHHHHHHHHcCCccEEEeCCccC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~  113 (115)
                              ...++|+||||||..
T Consensus       228 --------~~~~~D~Vih~Aa~~  242 (508)
T 4f6l_B          228 --------LPENMDTIIHAGART  242 (508)
T ss_dssp             --------CSSCCSEEEECCCC-
T ss_pred             --------CccCCCEEEECCcee
Confidence                    356899999999864

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=98.95  E-value=1.2e-10  Score=78.13  Aligned_cols=38  Identities=13%  Similarity=0.197  Sum_probs=34.0

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   52 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~   52 (115)
                      +++++++|||++|+||..++++|+++|++|++++|+..
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   42 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV   42 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence            45789999999999999999999999999999998765

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=98.94  E-value=6.7e-10  Score=74.19  Aligned_cols=79  Identities=16%  Similarity=0.248  Sum_probs=54.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHhC-CeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      +++|||++|+||..++++|+++| ++|++++|+.....  ...+..         ..   +.+|++ +.+.++.+++.. 
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~---------~~---~~~d~~-~~~~~~~~~~~~-   64 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLVD---------LN---IADYMD-KEDFLIQIMAGE-   64 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHHT---------SC---CSEEEE-HHHHHHHHHTTC-
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcCc---------ce---eccccc-cHHHHHHHHhcc-
Confidence            37999999999999999999999 89999998765421  111211         11   567885 666555544310 


Q ss_pred             HHcCCccEEEeCCccCC
Q 033624           98 EAFGRVDALVNNAGIRG  114 (115)
Q Consensus        98 ~~~~~id~li~naG~~~  114 (115)
                       .++++|++|||||...
T Consensus        65 -~~~~~d~vi~~a~~~~   80 (310)
T 1eq2_A           65 -EFGDVEAIFHEGACSS   80 (310)
T ss_dssp             -CCSSCCEEEECCSCCC
T ss_pred             -ccCCCcEEEECccccc
Confidence             0236999999999753

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=98.93  E-value=1.7e-09  Score=72.14  Aligned_cols=70  Identities=20%  Similarity=0.228  Sum_probs=52.2

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +++++++|||++|+||..+++.|+++|+      +.             .     .....+..+.+|++ +.+.+..+++
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~-------------~-----~~~~~~~~~~~D~~-d~~~~~~~~~   58 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LP-------------G-----EDWVFVSSKDADLT-DTAQTRALFE   58 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC------CT-------------T-----CEEEECCTTTCCTT-SHHHHHHHHH
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC------cc-------------c-----ccccccCceecccC-CHHHHHHHHh
Confidence            4578999999999999999999999997      00             0     00122344568995 7887777766


Q ss_pred             HHHHHcCCccEEEeCCccCC
Q 033624           95 KAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~~  114 (115)
                      ..     ++|+|||+||..+
T Consensus        59 ~~-----~~d~Vih~A~~~~   73 (319)
T 4b8w_A           59 KV-----QPTHVIHLAAMVG   73 (319)
T ss_dssp             HS-----CCSEEEECCCCCC
T ss_pred             hc-----CCCEEEECceecc
Confidence            52     6999999999753

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.91  E-value=4.3e-09  Score=74.54  Aligned_cols=77  Identities=23%  Similarity=0.342  Sum_probs=57.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .+++++|+| +|++|+.+++.|++.|++|++++|+.++.+++.+.+           ..+..+.+|++ +.+++..++  
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~-----------~~~~~~~~Dv~-d~~~l~~~l--   66 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV-----------QHSTPISLDVN-DDAALDAEV--   66 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC-----------TTEEEEECCTT-CHHHHHHHH--
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc-----------CCceEEEeecC-CHHHHHHHH--
Confidence            367899998 799999999999999999999999876554332211           13567788995 666665544  


Q ss_pred             HHHHcCCccEEEeCCcc
Q 033624           96 AWEAFGRVDALVNNAGI  112 (115)
Q Consensus        96 ~~~~~~~id~li~naG~  112 (115)
                           ..+|++|||++.
T Consensus        67 -----~~~DvVIn~a~~   78 (450)
T 1ff9_A           67 -----AKHDLVISLIPY   78 (450)
T ss_dssp             -----TTSSEEEECCC-
T ss_pred             -----cCCcEEEECCcc
Confidence                 268999999986

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=98.90  E-value=8.3e-10  Score=74.08  Aligned_cols=73  Identities=15%  Similarity=0.158  Sum_probs=51.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      ++++|||++|+||..++++|+++|..|++..++......    +          ...+.++.+|++ + +++..+++   
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~----~----------~~~~~~~~~Dl~-~-~~~~~~~~---   62 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF----V----------NEAARLVKADLA-A-DDIKDYLK---   62 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG----S----------CTTEEEECCCTT-T-SCCHHHHT---
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh----c----------CCCcEEEECcCC-h-HHHHHHhc---
Confidence            469999999999999999999999444444444332211    0          135778899996 5 55554433   


Q ss_pred             HHcCCccEEEeCCccC
Q 033624           98 EAFGRVDALVNNAGIR  113 (115)
Q Consensus        98 ~~~~~id~li~naG~~  113 (115)
                          .+|++||+||..
T Consensus        63 ----~~d~vih~a~~~   74 (313)
T 3ehe_A           63 ----GAEEVWHIAANP   74 (313)
T ss_dssp             ----TCSEEEECCCCC
T ss_pred             ----CCCEEEECCCCC
Confidence                689999999853

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.88  E-value=7.5e-09  Score=70.30  Aligned_cols=80  Identities=23%  Similarity=0.345  Sum_probs=57.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .|++++|+|++++||..+++.+...|++|++++++.++.+.+ +.+   +       ..   ..+|.+ +.+++...+.+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~---g-------~~---~~~d~~-~~~~~~~~~~~  209 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI---G-------FD---AAFNYK-TVNSLEEALKK  209 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---T-------CS---EEEETT-SCSCHHHHHHH
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc---C-------Cc---EEEecC-CHHHHHHHHHH
Confidence            489999999999999999999999999999999987766554 333   2       11   224664 31233333443


Q ss_pred             HHHHcCCccEEEeCCcc
Q 033624           96 AWEAFGRVDALVNNAGI  112 (115)
Q Consensus        96 ~~~~~~~id~li~naG~  112 (115)
                      ...  +.+|++|+|+|.
T Consensus       210 ~~~--~~~d~vi~~~g~  224 (333)
T 1v3u_A          210 ASP--DGYDCYFDNVGG  224 (333)
T ss_dssp             HCT--TCEEEEEESSCH
T ss_pred             HhC--CCCeEEEECCCh
Confidence            322  579999999984

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.85  E-value=1.5e-08  Score=64.01  Aligned_cols=79  Identities=19%  Similarity=0.166  Sum_probs=54.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .|++++|+|+++|||..+++.+...|++|++++++++..+.+    ++.+       ..   ..+|.. +.+..+.+.+.
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~~g-------~~---~~~d~~-~~~~~~~~~~~  102 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SRLG-------VE---YVGDSR-SVDFADEILEL  102 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HTTC-------CS---EEEETT-CSTHHHHHHHH
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcC-------CC---EEeeCC-cHHHHHHHHHH
Confidence            588999999999999999999999999999999987655433    2222       11   124664 33333332221


Q ss_pred             HHHHcCCccEEEeCCc
Q 033624           96 AWEAFGRVDALVNNAG  111 (115)
Q Consensus        96 ~~~~~~~id~li~naG  111 (115)
                      . . .+++|++|+|+|
T Consensus       103 ~-~-~~~~D~vi~~~g  116 (198)
T 1pqw_A          103 T-D-GYGVDVVLNSLA  116 (198)
T ss_dssp             T-T-TCCEEEEEECCC
T ss_pred             h-C-CCCCeEEEECCc
Confidence            1 1 136999999997

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.84  E-value=1e-09  Score=73.48  Aligned_cols=80  Identities=25%  Similarity=0.380  Sum_probs=57.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ++.+++++|+|++ |+|+++++.|++.| +|++++|+.++.+++.+.+...+      .... .+.+|+. +.       
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~------~~~~-~~~~d~~-~~-------  187 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKL------NKKF-GEEVKFS-GL-------  187 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHH------TCCH-HHHEEEE-CT-------
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhc------cccc-ceeEEEe-eH-------
Confidence            4678999999996 99999999999999 99999999888777776664210      0000 1224443 21       


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                         .+.++++|+||||+|+.
T Consensus       188 ---~~~~~~~DilVn~ag~~  204 (287)
T 1nvt_A          188 ---DVDLDGVDIIINATPIG  204 (287)
T ss_dssp             ---TCCCTTCCEEEECSCTT
T ss_pred             ---HHhhCCCCEEEECCCCC
Confidence               23457899999999864

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.69  E-value=1.8e-07  Score=63.47  Aligned_cols=83  Identities=22%  Similarity=0.385  Sum_probs=58.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecc---cchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR---VDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGAT   88 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~   88 (115)
                      .++.+++++|+|+ ||+|++++..|++.|+ +|.++.|+   .++.+++.+.+....      +..+.  ..++ ++.+.
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~------~~~~~--~~~~-~~~~~  219 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKT------DCKAQ--LFDI-EDHEQ  219 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS------SCEEE--EEET-TCHHH
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhc------CCceE--Eecc-chHHH
Confidence            3567999999998 7999999999999999 89999999   777777777765422      11222  3344 24333


Q ss_pred             HHHHHHHHHHHcCCccEEEeCCcc
Q 033624           89 IEISVQKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        89 ~~~~~~~~~~~~~~id~li~naG~  112 (115)
                      +...       ....|++||+..+
T Consensus       220 l~~~-------l~~aDiIINaTp~  236 (315)
T 3tnl_A          220 LRKE-------IAESVIFTNATGV  236 (315)
T ss_dssp             HHHH-------HHTCSEEEECSST
T ss_pred             HHhh-------hcCCCEEEECccC
Confidence            3322       2257999998753

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.69  E-value=2e-07  Score=55.82  Aligned_cols=75  Identities=21%  Similarity=0.256  Sum_probs=54.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      ..++++|+|+ |.+|..+++.|.+.|++|++++++++..+.+.+.             .+.++.+|.+ +++.++.+   
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~-------------~~~~~~gd~~-~~~~l~~~---   66 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE-------------GFDAVIADPT-DESFYRSL---   66 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-------------TCEEEECCTT-CHHHHHHS---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC-------------CCcEEECCCC-CHHHHHhC---
Confidence            3567999998 7899999999999999999999998776554431             1446678885 55544332   


Q ss_pred             HHHHcCCccEEEeCCc
Q 033624           96 AWEAFGRVDALVNNAG  111 (115)
Q Consensus        96 ~~~~~~~id~li~naG  111 (115)
                         ...+.|++|.+.+
T Consensus        67 ---~~~~~d~vi~~~~   79 (141)
T 3llv_A           67 ---DLEGVSAVLITGS   79 (141)
T ss_dssp             ---CCTTCSEEEECCS
T ss_pred             ---CcccCCEEEEecC
Confidence               2346788887765

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=98.67  E-value=4.3e-08  Score=70.29  Aligned_cols=66  Identities=23%  Similarity=0.280  Sum_probs=50.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +++++|||++|+||..+++.|++.|++|++++|+.....                     .+.+|+. +.         .
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~---------------------~v~~d~~-~~---------~  195 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG---------------------KRFWDPL-NP---------A  195 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT---------------------CEECCTT-SC---------C
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc---------------------ceeeccc-ch---------h
Confidence            568999999999999999999999999999999865310                     1445663 21         0


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                      ...+.++|+|||+||..
T Consensus       196 ~~~l~~~D~Vih~A~~~  212 (516)
T 3oh8_A          196 SDLLDGADVLVHLAGEP  212 (516)
T ss_dssp             TTTTTTCSEEEECCCC-
T ss_pred             HHhcCCCCEEEECCCCc
Confidence            22345799999999864

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.66  E-value=1.2e-07  Score=64.78  Aligned_cols=80  Identities=23%  Similarity=0.251  Sum_probs=56.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .|++++|+|++++||..+++.+...|++|+++++++++.+.+ +.+   +       ..   ..+|.+ +.+++...+.+
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~---g-------~~---~~~d~~-~~~~~~~~~~~  233 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSI---G-------GE---VFIDFT-KEKDIVGAVLK  233 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHT---T-------CC---EEEETT-TCSCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHc---C-------Cc---eEEecC-ccHhHHHHHHH
Confidence            588999999999999999999999999999999988776433 222   2       11   123664 22334444444


Q ss_pred             HHHHcCCccEEEeCCcc
Q 033624           96 AWEAFGRVDALVNNAGI  112 (115)
Q Consensus        96 ~~~~~~~id~li~naG~  112 (115)
                      +..  +.+|++|+|+|.
T Consensus       234 ~~~--~~~D~vi~~~g~  248 (347)
T 2hcy_A          234 ATD--GGAHGVINVSVS  248 (347)
T ss_dssp             HHT--SCEEEEEECSSC
T ss_pred             HhC--CCCCEEEECCCc
Confidence            433  279999999984

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.65  E-value=1.5e-07  Score=67.06  Aligned_cols=79  Identities=18%  Similarity=0.238  Sum_probs=57.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHh-CCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .+.+++++|+|+ |++|+.+++.|++. +++|++++|+.++.+++.+. .           .+..+.+|+. +.+++..+
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-~-----------~~~~~~~D~~-d~~~l~~~   85 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-S-----------GSKAISLDVT-DDSALDKV   85 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-G-----------TCEEEECCTT-CHHHHHHH
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-c-----------CCcEEEEecC-CHHHHHHH
Confidence            456789999997 99999999999998 77899999998776654432 1           2345678885 66655554


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                      +.       .+|+|||+++..
T Consensus        86 l~-------~~DvVIn~tp~~   99 (467)
T 2axq_A           86 LA-------DNDVVISLIPYT   99 (467)
T ss_dssp             HH-------TSSEEEECSCGG
T ss_pred             Hc-------CCCEEEECCchh
Confidence            43       589999999863

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.65  E-value=3.8e-08  Score=70.87  Aligned_cols=47  Identities=32%  Similarity=0.544  Sum_probs=37.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHh
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~   61 (115)
                      .+.+++++|||+ +|+|++++..|++.|++|+++.|+.++.+++.+.+
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~  407 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI  407 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc
Confidence            467899999999 59999999999999999999999988887777665

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.63  E-value=6.4e-08  Score=57.72  Aligned_cols=77  Identities=13%  Similarity=0.222  Sum_probs=52.1

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      +.+++++|+|+ |.+|..+++.|.+.|++|++++++++..+.    +...+         ...+.+|.+ +.+.+..+  
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~----~~~~~---------~~~~~~d~~-~~~~l~~~--   66 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNA----YASYA---------THAVIANAT-EENELLSL--   66 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHT----TTTTC---------SEEEECCTT-CHHHHHTT--
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHHhC---------CEEEEeCCC-CHHHHHhc--
Confidence            45678999998 999999999999999999999988654332    22111         234567774 44333221  


Q ss_pred             HHHHHcCCccEEEeCCcc
Q 033624           95 KAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~  112 (115)
                          ...+.|++|++++.
T Consensus        67 ----~~~~~d~vi~~~~~   80 (144)
T 2hmt_A           67 ----GIRNFEYVIVAIGA   80 (144)
T ss_dssp             ----TGGGCSEEEECCCS
T ss_pred             ----CCCCCCEEEECCCC
Confidence                23468999988874

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.62  E-value=1.3e-07  Score=63.97  Aligned_cols=79  Identities=13%  Similarity=0.215  Sum_probs=54.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .|++++|+|++++||..+++.+...|++|+++++++++.+.+.+ +   +       ..   ..+|.. +.+..+.+.+.
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~---g-------~~---~~~~~~-~~~~~~~~~~~  204 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A---G-------AW---QVINYR-EEDLVERLKEI  204 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H---T-------CS---EEEETT-TSCHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---C-------CC---EEEECC-CccHHHHHHHH
Confidence            48999999999999999999999999999999998776655443 2   1       11   123553 33333332222


Q ss_pred             HHHHcCCccEEEeCCc
Q 033624           96 AWEAFGRVDALVNNAG  111 (115)
Q Consensus        96 ~~~~~~~id~li~naG  111 (115)
                      . . ...+|++|+|+|
T Consensus       205 ~-~-~~~~D~vi~~~g  218 (327)
T 1qor_A          205 T-G-GKKVRVVYDSVG  218 (327)
T ss_dssp             T-T-TCCEEEEEECSC
T ss_pred             h-C-CCCceEEEECCc
Confidence            1 1 236999999998

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.61  E-value=8.5e-08  Score=65.35  Aligned_cols=81  Identities=17%  Similarity=0.305  Sum_probs=55.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .|++++|+|+++++|..+++.+...|++|++++++.++.+.+.+.+   +       ..   ..+|.. +.+++...+.+
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~---g-------~~---~~~d~~-~~~~~~~~~~~  220 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF---G-------FD---DAFNYK-EESDLTAALKR  220 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS---C-------CS---EEEETT-SCSCSHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C-------Cc---eEEecC-CHHHHHHHHHH
Confidence            4889999999999999999999999999999999877665443222   2       11   123553 22222333333


Q ss_pred             HHHHcCCccEEEeCCcc
Q 033624           96 AWEAFGRVDALVNNAGI  112 (115)
Q Consensus        96 ~~~~~~~id~li~naG~  112 (115)
                      +.  .+.+|++|+|+|.
T Consensus       221 ~~--~~~~d~vi~~~g~  235 (345)
T 2j3h_A          221 CF--PNGIDIYFENVGG  235 (345)
T ss_dssp             HC--TTCEEEEEESSCH
T ss_pred             Hh--CCCCcEEEECCCH
Confidence            32  1479999999974

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.61  E-value=2.1e-07  Score=61.83  Aligned_cols=48  Identities=23%  Similarity=0.333  Sum_probs=42.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhh
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~   62 (115)
                      .+.+++++|+|+ ||+|+++++.|++.|++|++++|+.++.+++.+.+.
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~  163 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFA  163 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTG
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhh
Confidence            467899999998 799999999999999999999999988877777664

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.60  E-value=2.3e-07  Score=63.01  Aligned_cols=80  Identities=21%  Similarity=0.343  Sum_probs=55.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .|++++|+|++++||..+++.+...|++|+++++++++.+.+.+.+   +       ..   ...|.. +.+..+. +.+
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~---g-------~~---~~~~~~-~~~~~~~-~~~  213 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL---G-------FD---GAIDYK-NEDLAAG-LKR  213 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT---C-------CS---EEEETT-TSCHHHH-HHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C-------CC---EEEECC-CHHHHHH-HHH
Confidence            4899999999999999999999999999999999887766543333   2       11   123543 3222222 222


Q ss_pred             HHHHcCCccEEEeCCcc
Q 033624           96 AWEAFGRVDALVNNAGI  112 (115)
Q Consensus        96 ~~~~~~~id~li~naG~  112 (115)
                      ..  .+.+|++|+|+|.
T Consensus       214 ~~--~~~~d~vi~~~g~  228 (336)
T 4b7c_A          214 EC--PKGIDVFFDNVGG  228 (336)
T ss_dssp             HC--TTCEEEEEESSCH
T ss_pred             hc--CCCceEEEECCCc
Confidence            21  2479999999983

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=98.59  E-value=2e-07  Score=63.92  Aligned_cols=31  Identities=26%  Similarity=0.397  Sum_probs=28.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCC-eEEEEec
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGC-RIVAAAR   49 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r   49 (115)
                      +++|||++|+||+.++++|+++|+ +|+..+|
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~   33 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHR   33 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECC
Confidence            589999999999999999999998 8888877

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.59  E-value=2.1e-07  Score=63.20  Aligned_cols=80  Identities=13%  Similarity=0.206  Sum_probs=55.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .+++++|+|++++||..+++.+...|++|++++++.++.+.+.+ +   +       ..   ..+|.. +.+..+.+.+ 
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~---g-------~~---~~~d~~-~~~~~~~i~~-  208 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-L---G-------CH---HTINYS-TQDFAEVVRE-  208 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H---T-------CS---EEEETT-TSCHHHHHHH-
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---C-------CC---EEEECC-CHHHHHHHHH-
Confidence            48899999999999999999999999999999998876665433 3   1       11   123553 3333333222 


Q ss_pred             HHHHcCCccEEEeCCcc
Q 033624           96 AWEAFGRVDALVNNAGI  112 (115)
Q Consensus        96 ~~~~~~~id~li~naG~  112 (115)
                      ... ...+|++|+|+|.
T Consensus       209 ~~~-~~~~d~vi~~~g~  224 (333)
T 1wly_A          209 ITG-GKGVDVVYDSIGK  224 (333)
T ss_dssp             HHT-TCCEEEEEECSCT
T ss_pred             HhC-CCCCeEEEECCcH
Confidence            211 2369999999985

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.57  E-value=7.2e-07  Score=61.15  Aligned_cols=80  Identities=14%  Similarity=0.141  Sum_probs=55.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .|++++|+|++++||..+++.+...|++|+++++++++.+.+ +.+.          ..   ..+|.. +.+..+.+.+ 
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g----------~~---~~~~~~-~~~~~~~~~~-  225 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKLG----------AA---AGFNYK-KEDFSEATLK-  225 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHT----------CS---EEEETT-TSCHHHHHHH-
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcC----------Cc---EEEecC-ChHHHHHHHH-
Confidence            488999999999999999999999999999999988776654 3331          11   124553 3322222222 


Q ss_pred             HHHHcCCccEEEeCCcc
Q 033624           96 AWEAFGRVDALVNNAGI  112 (115)
Q Consensus        96 ~~~~~~~id~li~naG~  112 (115)
                      ... ...+|++|+|+|.
T Consensus       226 ~~~-~~~~d~vi~~~G~  241 (354)
T 2j8z_A          226 FTK-GAGVNLILDCIGG  241 (354)
T ss_dssp             HTT-TSCEEEEEESSCG
T ss_pred             Hhc-CCCceEEEECCCc
Confidence            111 1369999999985

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.57  E-value=1.7e-07  Score=64.22  Aligned_cols=79  Identities=22%  Similarity=0.316  Sum_probs=54.3

Q ss_pred             CC--cEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           16 NE--KVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        16 ~~--~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .|  ++++|+|++++||..+++.+...|+ +|++++++.++.+.+.+.+   +       ..   ..+|.. +.+..+. 
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~---g-------~~---~~~d~~-~~~~~~~-  222 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL---G-------FD---AAINYK-KDNVAEQ-  222 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS---C-------CS---EEEETT-TSCHHHH-
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---C-------Cc---eEEecC-chHHHHH-
Confidence            47  8999999999999999999999999 9999999877665544322   2       11   224553 3222222 


Q ss_pred             HHHHHHHcCCccEEEeCCc
Q 033624           93 VQKAWEAFGRVDALVNNAG  111 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG  111 (115)
                      +.+...  +.+|++|+|+|
T Consensus       223 ~~~~~~--~~~d~vi~~~G  239 (357)
T 2zb4_A          223 LRESCP--AGVDVYFDNVG  239 (357)
T ss_dssp             HHHHCT--TCEEEEEESCC
T ss_pred             HHHhcC--CCCCEEEECCC
Confidence            222211  26999999998

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.54  E-value=8.2e-07  Score=60.86  Aligned_cols=80  Identities=19%  Similarity=0.186  Sum_probs=54.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .|++++|+|+++++|..+++.+...|++|+++++++++.+.+ +.+   +       ..   ..+|.. +.+..+.+.+ 
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---g-------a~---~~~d~~-~~~~~~~~~~-  233 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN---G-------AH---EVFNHR-EVNYIDKIKK-  233 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---T-------CS---EEEETT-STTHHHHHHH-
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHc---C-------CC---EEEeCC-CchHHHHHHH-
Confidence            488999999999999999999999999999999988766533 222   2       11   124553 3332332222 


Q ss_pred             HHHHcCCccEEEeCCcc
Q 033624           96 AWEAFGRVDALVNNAGI  112 (115)
Q Consensus        96 ~~~~~~~id~li~naG~  112 (115)
                      ... ...+|++|+|+|.
T Consensus       234 ~~~-~~~~D~vi~~~G~  249 (351)
T 1yb5_A          234 YVG-EKGIDIIIEMLAN  249 (351)
T ss_dssp             HHC-TTCEEEEEESCHH
T ss_pred             HcC-CCCcEEEEECCCh
Confidence            111 1369999999973

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.53  E-value=1.1e-06  Score=60.79  Aligned_cols=78  Identities=22%  Similarity=0.214  Sum_probs=57.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+++++|+|+ |+||+.+++.+...|++|+++++++++.+.+.+.+.          ..   +.+|.. +.+++...+
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g----------~~---~~~~~~-~~~~l~~~~  227 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFG----------GR---VITLTA-TEANIKKSV  227 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT----------TS---EEEEEC-CHHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcC----------ce---EEEecC-CHHHHHHHH
Confidence            467899999999 999999999999999999999999877665544331          12   345664 555555443


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      .       ..|++|+|+|..
T Consensus       228 ~-------~~DvVi~~~g~~  240 (369)
T 2eez_A          228 Q-------HADLLIGAVLVP  240 (369)
T ss_dssp             H-------HCSEEEECCC--
T ss_pred             h-------CCCEEEECCCCC
Confidence            2       579999999864

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.46  E-value=1.6e-06  Score=59.40  Aligned_cols=79  Identities=15%  Similarity=0.249  Sum_probs=55.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .|++++|+|+++++|..+++.+...|++|+++++++++.+.+.+ +   +       ... .  .|.. +.+..+. +.+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---G-------a~~-~--~~~~-~~~~~~~-~~~  230 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-L---G-------AKR-G--INYR-SEDFAAV-IKA  230 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H---T-------CSE-E--EETT-TSCHHHH-HHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---C-------CCE-E--EeCC-chHHHHH-HHH
Confidence            48899999999999999999999999999999999887765443 3   1       111 1  3442 2222222 233


Q ss_pred             HHHHcCCccEEEeCCcc
Q 033624           96 AWEAFGRVDALVNNAGI  112 (115)
Q Consensus        96 ~~~~~~~id~li~naG~  112 (115)
                      ..  .+.+|++|+|+|.
T Consensus       231 ~~--~~g~Dvvid~~g~  245 (353)
T 4dup_A          231 ET--GQGVDIILDMIGA  245 (353)
T ss_dssp             HH--SSCEEEEEESCCG
T ss_pred             Hh--CCCceEEEECCCH
Confidence            22  4579999999984

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.45  E-value=2.7e-06  Score=57.68  Aligned_cols=50  Identities=20%  Similarity=0.359  Sum_probs=42.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecc---cchHHHHHHHhhC
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR---VDRLKSLCDEINK   63 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~---~~~~~~~~~~~~~   63 (115)
                      .++.+++++|+|+ ||.|++++..|++.|+ +|.++.|+   .++.+++.+.+..
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~  197 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNE  197 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhh
Confidence            3567999999998 8999999999999998 79999999   6677777776653

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.45  E-value=1.6e-06  Score=58.06  Aligned_cols=49  Identities=27%  Similarity=0.431  Sum_probs=43.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhhC
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINK   63 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~   63 (115)
                      .+.+++++|+|+ ||+|++++..|++.|+ +|.++.|+.++.+++.+.+..
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~  173 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINN  173 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHh
Confidence            567999999998 8999999999999999 699999999988888777753

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.45  E-value=2.8e-06  Score=57.97  Aligned_cols=80  Identities=19%  Similarity=0.269  Sum_probs=54.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHh-CCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      .+++++|+|+++++|..+++.+... |++|+++++++++.+.+. .+   +       ...   .+|.. +.+..+. +.
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~---g-------~~~---~~~~~-~~~~~~~-~~  233 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA---G-------ADY---VINAS-MQDPLAE-IR  233 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH---T-------CSE---EEETT-TSCHHHH-HH
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh---C-------CCE---EecCC-CccHHHH-HH
Confidence            5889999999999999999999999 999999999887765543 33   1       111   13443 3222222 22


Q ss_pred             HHHHHcCCccEEEeCCcc
Q 033624           95 KAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~  112 (115)
                      ++... +.+|++|+|+|.
T Consensus       234 ~~~~~-~~~d~vi~~~g~  250 (347)
T 1jvb_A          234 RITES-KGVDAVIDLNNS  250 (347)
T ss_dssp             HHTTT-SCEEEEEESCCC
T ss_pred             HHhcC-CCceEEEECCCC
Confidence            22111 589999999984

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=98.41  E-value=4.9e-06  Score=56.76  Aligned_cols=44  Identities=20%  Similarity=0.318  Sum_probs=38.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      .|++++|+|+++++|..+++.+...|++|++++++.++.+.+.+
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~  202 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS  202 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence            48899999999999999999999999999999998887765443

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.39  E-value=4.2e-06  Score=56.62  Aligned_cols=78  Identities=10%  Similarity=0.250  Sum_probs=54.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .|++++|+|+++++|..+++.+...|++|+++++++++.+.+.+ +-          ... .  .|.. +.+..    +.
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~G----------a~~-~--~~~~-~~~~~----~~  200 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKA-LG----------AWE-T--IDYS-HEDVA----KR  200 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HT----------CSE-E--EETT-TSCHH----HH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC----------CCE-E--EeCC-CccHH----HH
Confidence            48899999999999999999999999999999998877765443 31          111 1  3442 22222    22


Q ss_pred             HHHHc--CCccEEEeCCcc
Q 033624           96 AWEAF--GRVDALVNNAGI  112 (115)
Q Consensus        96 ~~~~~--~~id~li~naG~  112 (115)
                      +.+..  ..+|++|+|+|.
T Consensus       201 ~~~~~~~~g~Dvvid~~g~  219 (325)
T 3jyn_A          201 VLELTDGKKCPVVYDGVGQ  219 (325)
T ss_dssp             HHHHTTTCCEEEEEESSCG
T ss_pred             HHHHhCCCCceEEEECCCh
Confidence            22222  369999999984

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.38  E-value=2.6e-06  Score=56.57  Aligned_cols=48  Identities=27%  Similarity=0.348  Sum_probs=42.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhh
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~   62 (115)
                      .+.+++++|+|+ ||+|++++..|++.|++|+++.|+.++.+++.+.+.
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~  163 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQ  163 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHG
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcc
Confidence            467899999998 799999999999999999999999988888877764

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.35  E-value=6.8e-06  Score=55.91  Aligned_cols=44  Identities=20%  Similarity=0.310  Sum_probs=38.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      .|++++|+|+++++|..+++.+...|++|++++++.++.+.+.+
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~  187 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR  187 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence            48899999999999999999988999999999999888765544

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.33  E-value=6.1e-06  Score=56.01  Aligned_cols=78  Identities=21%  Similarity=0.267  Sum_probs=53.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .|++++|+|+++++|..+++.+...|++|+++++++++.+.+ +.+   +       ...   ..|.. +.+.    .+.
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---g-------a~~---~~~~~-~~~~----~~~  208 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEY---G-------AEY---LINAS-KEDI----LRQ  208 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---T-------CSE---EEETT-TSCH----HHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc---C-------CcE---EEeCC-CchH----HHH
Confidence            589999999999999999999999999999999988776643 332   1       111   13442 2222    222


Q ss_pred             HHHHc--CCccEEEeCCcc
Q 033624           96 AWEAF--GRVDALVNNAGI  112 (115)
Q Consensus        96 ~~~~~--~~id~li~naG~  112 (115)
                      +.+..  ..+|++|+|+|.
T Consensus       209 ~~~~~~~~g~D~vid~~g~  227 (334)
T 3qwb_A          209 VLKFTNGKGVDASFDSVGK  227 (334)
T ss_dssp             HHHHTTTSCEEEEEECCGG
T ss_pred             HHHHhCCCCceEEEECCCh
Confidence            22222  369999999984

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.30  E-value=7.9e-06  Score=55.67  Aligned_cols=79  Identities=20%  Similarity=0.231  Sum_probs=54.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .+++++|+|+++++|..+++.+...|++|+++++++++.+.+.+ +   +       ...   .+|.. +.+ +...+.+
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~---g-------a~~---~~d~~-~~~-~~~~~~~  229 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA-L---G-------ADE---TVNYT-HPD-WPKEVRR  229 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H---T-------CSE---EEETT-STT-HHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-c---C-------CCE---EEcCC-ccc-HHHHHHH
Confidence            48899999999999999999999999999999998877665432 3   1       111   14653 332 2222222


Q ss_pred             HHHHcCCccEEEeCCc
Q 033624           96 AWEAFGRVDALVNNAG  111 (115)
Q Consensus        96 ~~~~~~~id~li~naG  111 (115)
                      .. ....+|++|+|+|
T Consensus       230 ~~-~~~~~d~vi~~~g  244 (343)
T 2eih_A          230 LT-GGKGADKVVDHTG  244 (343)
T ss_dssp             HT-TTTCEEEEEESSC
T ss_pred             Hh-CCCCceEEEECCC
Confidence            21 1237999999998

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.28  E-value=4.6e-06  Score=58.79  Aligned_cols=86  Identities=21%  Similarity=0.217  Sum_probs=56.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEE--eecCC--------C
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVE--LDVCA--------D   85 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~di~~--------~   85 (115)
                      .|++++|+|++++||..+++.+...|++|+++++++++.+.+ +.+   +       .....-.  .|+..        +
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~l---G-------a~~~i~~~~~~~~~~~~~~~~~~  288 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RAL---G-------CDLVINRAELGITDDIADDPRRV  288 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---T-------CCCEEEHHHHTCCTTGGGCHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc---C-------CCEEEeccccccccccccccccc
Confidence            589999999999999999999999999999998887766544 222   2       1111111  11100        1


Q ss_pred             HHHHHHHHHHHHHHcC-CccEEEeCCcc
Q 033624           86 GATIEISVQKAWEAFG-RVDALVNNAGI  112 (115)
Q Consensus        86 ~~~~~~~~~~~~~~~~-~id~li~naG~  112 (115)
                      ..+++.+.+.+.+..+ .+|++|+|+|.
T Consensus       289 ~~~~~~~~~~v~~~~g~g~Dvvid~~G~  316 (447)
T 4a0s_A          289 VETGRKLAKLVVEKAGREPDIVFEHTGR  316 (447)
T ss_dssp             HHHHHHHHHHHHHHHSSCCSEEEECSCH
T ss_pred             chhhhHHHHHHHHHhCCCceEEEECCCc
Confidence            2333444555554444 69999999984

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.28  E-value=1.3e-05  Score=54.78  Aligned_cols=42  Identities=24%  Similarity=0.264  Sum_probs=37.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      +++++|+|+++++|...++.+...|++|+++++++++.+.+.
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~  206 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK  206 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            379999999999999999999999999999999888876554

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=98.28  E-value=1.2e-06  Score=58.30  Aligned_cols=34  Identities=21%  Similarity=0.321  Sum_probs=31.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccc
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   52 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~   52 (115)
                      +++||||+|.||..++++|.++|++|+++.|++.
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~   35 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG   35 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence            5899999999999999999999999999999754

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=98.27  E-value=5.6e-06  Score=55.71  Aligned_cols=48  Identities=31%  Similarity=0.446  Sum_probs=42.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhh
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~   62 (115)
                      .+.+++++|+|+ |++|++++..|++.|+ +|+++.|+.++.+++.+.+.
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~  186 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGD  186 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhh
Confidence            467899999998 7999999999999998 89999999988887777653

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=98.23  E-value=1.5e-05  Score=53.30  Aligned_cols=49  Identities=18%  Similarity=0.266  Sum_probs=43.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhhC
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINK   63 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~   63 (115)
                      ++.+++++|+|+ ||+|++++..|++.|+ +|.++.|+.++.+++.+.+..
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~  172 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAA  172 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGG
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhc
Confidence            567999999998 7999999999999996 899999999988888887753

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.22  E-value=1.3e-05  Score=48.59  Aligned_cols=77  Identities=19%  Similarity=0.242  Sum_probs=50.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc-chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .++++|.|+ |.+|..+++.|.+.|++|+++++++ +..+.+.+...          ..+.++..|.+ +++.+...   
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~----------~~~~~i~gd~~-~~~~l~~a---   67 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG----------DNADVIPGDSN-DSSVLKKA---   67 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC----------TTCEEEESCTT-SHHHHHHH---
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc----------CCCeEEEcCCC-CHHHHHHc---
Confidence            457888886 9999999999999999999999974 44444443322          12456667774 55433321   


Q ss_pred             HHHHcCCccEEEeCCc
Q 033624           96 AWEAFGRVDALVNNAG  111 (115)
Q Consensus        96 ~~~~~~~id~li~naG  111 (115)
                         ...+.|.+|.+.+
T Consensus        68 ---~i~~ad~vi~~~~   80 (153)
T 1id1_A           68 ---GIDRCRAILALSD   80 (153)
T ss_dssp             ---TTTTCSEEEECSS
T ss_pred             ---ChhhCCEEEEecC
Confidence               1235566666543

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.18  E-value=9e-06  Score=55.88  Aligned_cols=40  Identities=30%  Similarity=0.357  Sum_probs=35.4

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc---chHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV---DRLK   55 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~---~~~~   55 (115)
                      +.|++++|+|+ +++|..+++.+...|++|++++++.   ++.+
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~  221 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQT  221 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHH
Confidence            44899999999 9999999999999999999999987   6554

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=98.18  E-value=3.5e-06  Score=57.25  Aligned_cols=34  Identities=21%  Similarity=0.195  Sum_probs=30.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCC-------eEEEEeccc
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGC-------RIVAAARRV   51 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~-------~v~~~~r~~   51 (115)
                      .+++|||++|+||..++..|+++|.       .|+++++..
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~   45 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ   45 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC
Confidence            4799999999999999999999886       799988864

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.17  E-value=3.7e-05  Score=45.32  Aligned_cols=41  Identities=20%  Similarity=0.272  Sum_probs=34.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      +.+++|+|+ |.+|..+++.|.+.|++|++++++++..+.+.
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~   44 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKAS   44 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence            347889987 99999999999999999999999877665544

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=98.17  E-value=1.4e-05  Score=54.89  Aligned_cols=43  Identities=26%  Similarity=0.302  Sum_probs=37.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      .|++++|+|+++++|..+++.+...|++|+++++++++.+.+.
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~  205 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK  205 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            4889999999999999999999999999999999877665443

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=98.17  E-value=1.7e-05  Score=56.16  Aligned_cols=85  Identities=16%  Similarity=0.186  Sum_probs=58.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEe---ec-------CCC
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVEL---DV-------CAD   85 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---di-------~~~   85 (115)
                      .|.+++|+|++|++|...++.+...|++|+++++++++.+.+. .+-.          .. .+..   |.       ..+
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~-~lGa----------~~-vi~~~~~d~~~~~~~~~~~  295 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR-AMGA----------EA-IIDRNAEGYRFWKDENTQD  295 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTC----------CE-EEETTTTTCCSEEETTEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHH-hhCC----------cE-EEecCcCcccccccccccc
Confidence            4889999999999999999988899999999988877766543 3311          11 1111   00       023


Q ss_pred             HHHHHHHHHHHHHHcC--CccEEEeCCcc
Q 033624           86 GATIEISVQKAWEAFG--RVDALVNNAGI  112 (115)
Q Consensus        86 ~~~~~~~~~~~~~~~~--~id~li~naG~  112 (115)
                      ...++.+.+.+.+..+  .+|++|.++|.
T Consensus       296 ~~~~~~~~~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          296 PKEWKRFGKRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHHHHHHHHHHHHTSCCEEEEEECSCH
T ss_pred             hHHHHHHHHHHHHHhCCCCCcEEEEcCCc
Confidence            4555666666665543  79999999873

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.15  E-value=4.2e-05  Score=52.67  Aligned_cols=46  Identities=20%  Similarity=0.210  Sum_probs=40.3

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHh
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~   61 (115)
                      +.+++++|+|+ |++|+.+++.+...|++|++++|++++.+.+.+..
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~  210 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLF  210 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhh
Confidence            56789999999 99999999999999999999999988877665544

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=98.13  E-value=1.8e-05  Score=53.99  Aligned_cols=44  Identities=16%  Similarity=0.259  Sum_probs=38.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      .|.+++|+|+++++|...++.+...|++|+++++++++.+.+.+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~  193 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK  193 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence            58899999999999999999998999999999998877665443

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.05  E-value=7.7e-05  Score=44.49  Aligned_cols=41  Identities=15%  Similarity=0.174  Sum_probs=35.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      ..+++|.|. |.+|..+++.|.+.|+.|++++++++..+.+.
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~   47 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELR   47 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence            456888887 88999999999999999999999988776544

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.05  E-value=3.6e-05  Score=53.37  Aligned_cols=77  Identities=19%  Similarity=0.230  Sum_probs=54.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+++++|+|+ |+||..+++.+...|++|++++++.++.+.+.+.+.          ..+   .++.. ...++...+
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g----------~~~---~~~~~-~~~~l~~~l  229 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFC----------GRI---HTRYS-SAYELEGAV  229 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT----------TSS---EEEEC-CHHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcC----------Cee---EeccC-CHHHHHHHH
Confidence            567999999998 999999999999999999999999887766554332          111   12332 343443332


Q ss_pred             HHHHHHcCCccEEEeCCcc
Q 033624           94 QKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~  112 (115)
                      .       ..|++|++++.
T Consensus       230 ~-------~aDvVi~~~~~  241 (377)
T 2vhw_A          230 K-------RADLVIGAVLV  241 (377)
T ss_dssp             H-------HCSEEEECCCC
T ss_pred             c-------CCCEEEECCCc
Confidence            2       47999998865

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=98.04  E-value=3.8e-05  Score=52.05  Aligned_cols=37  Identities=22%  Similarity=0.258  Sum_probs=31.4

Q ss_pred             CCCcE-EEEecCCC-----------------h-HHHHHHHHHHHhCCeEEEEeccc
Q 033624           15 LNEKV-VMVTGASS-----------------G-LGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        15 ~~~~~-~lvtG~~~-----------------g-iG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      +.|++ ++||+|..                 | .|.++|+.++++|+.|+++.+..
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~   89 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR   89 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence            46777 99998754                 4 99999999999999999988753

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=98.02  E-value=2.1e-05  Score=53.53  Aligned_cols=77  Identities=21%  Similarity=0.203  Sum_probs=52.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .|.+++|+|+ +++|..+++.+...|++|+++++++++.+.+. .+   +       ..   ..+|.. +.+ +...+.+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l---G-------a~---~~~d~~-~~~-~~~~~~~  226 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-EL---G-------AD---LVVNPL-KED-AAKFMKE  226 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HT---T-------CS---EEECTT-TSC-HHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HC---C-------CC---EEecCC-Ccc-HHHHHHH
Confidence            4889999999 88999999999999999999999887766443 22   2       11   123553 222 2222222


Q ss_pred             HHHHcCCccEEEeCCcc
Q 033624           96 AWEAFGRVDALVNNAGI  112 (115)
Q Consensus        96 ~~~~~~~id~li~naG~  112 (115)
                      +   .+.+|++|+++|.
T Consensus       227 ~---~~~~d~vid~~g~  240 (339)
T 1rjw_A          227 K---VGGVHAAVVTAVS  240 (339)
T ss_dssp             H---HSSEEEEEESSCC
T ss_pred             H---hCCCCEEEECCCC
Confidence            2   2579999999984

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.97  E-value=2.5e-05  Score=47.42  Aligned_cols=41  Identities=15%  Similarity=0.238  Sum_probs=35.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK   55 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   55 (115)
                      ...+++++|.|+ |.+|..+++.|.+.|++|++++++++..+
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~   56 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFH   56 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGG
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH
Confidence            345788999986 99999999999999999999999877654

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.96  E-value=2e-05  Score=56.37  Aligned_cols=44  Identities=20%  Similarity=0.269  Sum_probs=38.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      ++.|++++|||++ +||+.+|+.|...|++|+++++++.......
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa  305 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAT  305 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            4789999999986 9999999999999999999999876655444

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.95  E-value=3.7e-05  Score=50.45  Aligned_cols=82  Identities=18%  Similarity=0.258  Sum_probs=54.5

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEeccc-------------------chHHHHHHHhhCCCCCCCCCccc
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV-------------------DRLKSLCDEINKPGMVGSPDSVR   74 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~   74 (115)
                      +.+++++|.|+ ||+|..+++.|++.|. ++.+++++.                   .+.+.+.+.+....     +..+
T Consensus        29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n-----p~~~  102 (249)
T 1jw9_B           29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRIN-----PHIA  102 (249)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC-----TTSE
T ss_pred             HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHC-----CCcE
Confidence            45788999997 8999999999999997 789999886                   66666666665422     1134


Q ss_pred             eEEEEeecCCCHHHHHHHHHHHHHHcCCccEEEeCCc
Q 033624           75 AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG  111 (115)
Q Consensus        75 ~~~~~~di~~~~~~~~~~~~~~~~~~~~id~li~naG  111 (115)
                      +..+..++.  .+.+..+       +...|++|.+..
T Consensus       103 v~~~~~~~~--~~~~~~~-------~~~~DvVi~~~d  130 (249)
T 1jw9_B          103 ITPVNALLD--DAELAAL-------IAEHDLVLDCTD  130 (249)
T ss_dssp             EEEECSCCC--HHHHHHH-------HHTSSEEEECCS
T ss_pred             EEEEeccCC--HhHHHHH-------HhCCCEEEEeCC
Confidence            555555552  2222222       124688877653

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.95  E-value=4.7e-05  Score=50.91  Aligned_cols=42  Identities=29%  Similarity=0.336  Sum_probs=37.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      .|++++|+|+++++|..+++.+...|++|+++++++++.+.+
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  166 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP  166 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            488999999999999999999989999999999988776654

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.94  E-value=0.00016  Score=49.82  Aligned_cols=76  Identities=20%  Similarity=0.283  Sum_probs=50.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .|.+++|+|+++++|...++.+...|++|++++ +.++.+.+ +.+   +       ... .  .|.. +.+.    .++
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~-~~l---G-------a~~-v--~~~~-~~~~----~~~  242 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELV-RKL---G-------ADD-V--IDYK-SGSV----EEQ  242 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH-HHT---T-------CSE-E--EETT-SSCH----HHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHH-HHc---C-------CCE-E--EECC-chHH----HHH
Confidence            588999999999999999998888999998887 44554432 332   2       111 1  2442 2221    222


Q ss_pred             HHHHcCCccEEEeCCcc
Q 033624           96 AWEAFGRVDALVNNAGI  112 (115)
Q Consensus        96 ~~~~~~~id~li~naG~  112 (115)
                      +.+ .+.+|++|+|+|.
T Consensus       243 ~~~-~~g~D~vid~~g~  258 (375)
T 2vn8_A          243 LKS-LKPFDFILDNVGG  258 (375)
T ss_dssp             HHT-SCCBSEEEESSCT
T ss_pred             Hhh-cCCCCEEEECCCC
Confidence            222 3579999999985

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.94  E-value=8.3e-05  Score=51.11  Aligned_cols=75  Identities=16%  Similarity=0.236  Sum_probs=53.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .|.+++|+|+ +++|..+++.+...|++|+++++++++.+.+.+.+   +       ..   ...|.. +.+.++     
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l---G-------a~---~v~~~~-~~~~~~-----  246 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF---G-------AD---SFLVSR-DQEQMQ-----  246 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS---C-------CS---EEEETT-CHHHHH-----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---C-------Cc---eEEecc-CHHHHH-----
Confidence            5889999996 99999999999899999999999888766544332   2       11   123553 432222     


Q ss_pred             HHHHcCCccEEEeCCcc
Q 033624           96 AWEAFGRVDALVNNAGI  112 (115)
Q Consensus        96 ~~~~~~~id~li~naG~  112 (115)
                        +..+.+|++|+++|.
T Consensus       247 --~~~~~~D~vid~~g~  261 (366)
T 1yqd_A          247 --AAAGTLDGIIDTVSA  261 (366)
T ss_dssp             --HTTTCEEEEEECCSS
T ss_pred             --HhhCCCCEEEECCCc
Confidence              223579999999985

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.91  E-value=8e-05  Score=50.75  Aligned_cols=40  Identities=23%  Similarity=0.367  Sum_probs=34.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      .|.+++|+|+++++|..+++.+...|++|+++ ++.++.+.
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~  189 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEY  189 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHH
Confidence            48899999999999999999999999999988 66666543

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.89  E-value=4.4e-05  Score=50.79  Aligned_cols=48  Identities=29%  Similarity=0.430  Sum_probs=43.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhh
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~   62 (115)
                      ++.+++++|+|+ ||+|++++..|++.|+ +|.++.|+.++.+++.+.+.
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~  165 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELD  165 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHC
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence            567999999998 7999999999999996 89999999998888888774

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.88  E-value=0.00017  Score=44.70  Aligned_cols=43  Identities=14%  Similarity=0.131  Sum_probs=36.1

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHh-CCeEEEEecccchHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~   58 (115)
                      +.+.+++|.|+ |.+|..+++.|.+. |++|++++++++..+.+.
T Consensus        37 ~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~   80 (183)
T 3c85_A           37 PGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHR   80 (183)
T ss_dssp             CTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH
Confidence            44667888885 99999999999999 999999999987765543

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.87  E-value=5.4e-05  Score=52.11  Aligned_cols=70  Identities=14%  Similarity=0.225  Sum_probs=51.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      +++|.|+ |++|+.+++.|.+ .+.|.+.+++.+.++++.              ..+..+.+|+. +.+++..++.    
T Consensus        18 kilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~--------------~~~~~~~~d~~-d~~~l~~~~~----   76 (365)
T 3abi_A           18 KVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK--------------EFATPLKVDAS-NFDKLVEVMK----   76 (365)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT--------------TTSEEEECCTT-CHHHHHHHHT----
T ss_pred             EEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh--------------ccCCcEEEecC-CHHHHHHHHh----
Confidence            6888998 9999999998865 578999999877665432              12446778995 7666555443    


Q ss_pred             HcCCccEEEeCCcc
Q 033624           99 AFGRVDALVNNAGI  112 (115)
Q Consensus        99 ~~~~id~li~naG~  112 (115)
                         +.|++|++++.
T Consensus        77 ---~~DvVi~~~p~   87 (365)
T 3abi_A           77 ---EFELVIGALPG   87 (365)
T ss_dssp             ---TCSEEEECCCG
T ss_pred             ---CCCEEEEecCC
Confidence               56999999874

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.85  E-value=0.00025  Score=48.52  Aligned_cols=83  Identities=17%  Similarity=0.146  Sum_probs=54.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCe-EEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      .|.+++|+|+ |++|...++.....|++ |+++++++++.+.+.+ + .         ..+..+..|.. +.+++...+.
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l-~---------~~~~~~~~~~~-~~~~~~~~v~  245 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-I-C---------PEVVTHKVERL-SAEESAKKIV  245 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-H-C---------TTCEEEECCSC-CHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-c---------hhccccccccc-chHHHHHHHH
Confidence            4789999998 99999999888889997 8888888877765443 3 2         12334444432 3333333232


Q ss_pred             HHHHHcCCccEEEeCCcc
Q 033624           95 KAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~  112 (115)
                      +.. ....+|++|.++|.
T Consensus       246 ~~t-~g~g~Dvvid~~g~  262 (363)
T 3m6i_A          246 ESF-GGIEPAVALECTGV  262 (363)
T ss_dssp             HHT-SSCCCSEEEECSCC
T ss_pred             HHh-CCCCCCEEEECCCC
Confidence            221 12369999999874

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.85  E-value=5.8e-05  Score=51.69  Aligned_cols=38  Identities=11%  Similarity=0.050  Sum_probs=33.3

Q ss_pred             CC-cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch
Q 033624           16 NE-KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR   53 (115)
Q Consensus        16 ~~-~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   53 (115)
                      .| .+++|+|++|++|...++.....|++|+++.++.++
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN  204 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence            47 899999999999999988888889999988877665

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.85  E-value=0.00015  Score=49.36  Aligned_cols=42  Identities=21%  Similarity=0.152  Sum_probs=36.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLC   58 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~   58 (115)
                      .|.+++|+|+ +++|..+++.+...|+ +|+++++++++.+.+.
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~  209 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK  209 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence            6889999999 9999999999888999 8999999877665443

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.80  E-value=0.00029  Score=47.36  Aligned_cols=90  Identities=10%  Similarity=0.141  Sum_probs=59.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEeccc------------------chHHHHHHHhhCCCCCCCCCccc
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV------------------DRLKSLCDEINKPGMVGSPDSVR   74 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~------------------~~~~~~~~~~~~~~~~~~~~~~~   74 (115)
                      .+.+.+++|.|+ ||+|..+++.|++.|. ++.+++.+.                  .+.+.+.+.++...     +..+
T Consensus        33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iN-----P~v~  106 (292)
T 3h8v_A           33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNIN-----PDVL  106 (292)
T ss_dssp             GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHC-----TTSE
T ss_pred             HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhC-----CCcE
Confidence            355778999988 8999999999999996 788888764                  44455555555432     2345


Q ss_pred             eEEEEeecCCCHHHHHHHHHHHHHH----cCCccEEEeCC
Q 033624           75 AVAVELDVCADGATIEISVQKAWEA----FGRVDALVNNA  110 (115)
Q Consensus        75 ~~~~~~di~~~~~~~~~~~~~~~~~----~~~id~li~na  110 (115)
                      +..+..+++ ..+.+..+++.+...    ....|++|.+.
T Consensus       107 v~~~~~~l~-~~~~~~~~~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A          107 FEVHNYNIT-TVENFQHFMDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             EEEECCCTT-SHHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred             EEEecccCC-cHHHHHHHhhhhcccccccCCCCCEEEECC
Confidence            667777774 445555555433211    13678888764

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.76  E-value=0.00027  Score=48.00  Aligned_cols=76  Identities=18%  Similarity=0.222  Sum_probs=51.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .|.+++|+|+ +++|...++.+...|++|+++++++++.+.+. .+   +       ... .  .|.. +.+..    +.
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l---G-------a~~-~--i~~~-~~~~~----~~  225 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR-RL---G-------AEV-A--VNAR-DTDPA----AW  225 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT---T-------CSE-E--EETT-TSCHH----HH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-Hc---C-------CCE-E--EeCC-CcCHH----HH
Confidence            5889999987 89999999988889999999999887766433 22   2       111 1  2332 22222    22


Q ss_pred             HHHHcCCccEEEeCCc
Q 033624           96 AWEAFGRVDALVNNAG  111 (115)
Q Consensus        96 ~~~~~~~id~li~naG  111 (115)
                      +.+..+.+|++|.++|
T Consensus       226 ~~~~~g~~d~vid~~g  241 (340)
T 3s2e_A          226 LQKEIGGAHGVLVTAV  241 (340)
T ss_dssp             HHHHHSSEEEEEESSC
T ss_pred             HHHhCCCCCEEEEeCC
Confidence            2223458999999986

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.76  E-value=7.9e-06  Score=54.54  Aligned_cols=41  Identities=20%  Similarity=0.396  Sum_probs=36.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLK   55 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~   55 (115)
                      ++.+++++|+|+ ||+|++++..|++.|+ +|.++.|+.++.+
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~  155 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFN  155 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGT
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHH
Confidence            456899999997 7999999999999999 8999999987644

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.75  E-value=0.00028  Score=45.01  Aligned_cols=40  Identities=8%  Similarity=0.130  Sum_probs=34.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      +++|+|+ |.+|..+++.|.+.|+.|++++++++..+.+.+
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~   41 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAK   41 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence            4789996 889999999999999999999999887766544

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.74  E-value=0.00035  Score=47.95  Aligned_cols=41  Identities=15%  Similarity=0.207  Sum_probs=35.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      .|.+++|+| ++++|...++.+...|++|+++++++++.+.+
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  229 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA  229 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH
Confidence            488999999 79999999998888999999999988776654

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.68  E-value=0.00048  Score=47.55  Aligned_cols=42  Identities=24%  Similarity=0.222  Sum_probs=35.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhC-CeEEEEecccchHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLC   58 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~   58 (115)
                      .|.+++|+| ++++|...++.+...| ++|+++++++++.+.+.
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~  237 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE  237 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH
Confidence            478999999 8999999999888889 59999999887665443

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.65  E-value=0.001  Score=45.39  Aligned_cols=41  Identities=29%  Similarity=0.319  Sum_probs=34.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      .|.+++|+|+ +++|...++.+...|++|+++++++++.+.+
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  208 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVA  208 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            4889999996 8999999998888999998888887766543

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.63  E-value=0.00036  Score=47.98  Aligned_cols=80  Identities=20%  Similarity=0.231  Sum_probs=51.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      .|.+++|+|+ +++|...++.+...|+ +|+++++++++.+.+. .+   +       .. ..  .|..+..+++...+.
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l---G-------a~-~v--i~~~~~~~~~~~~~~  256 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF---G-------AT-DF--VNPNDHSEPISQVLS  256 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT---T-------CC-EE--ECGGGCSSCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hh---C-------Cc-eE--EeccccchhHHHHHH
Confidence            4789999995 9999999998888999 7999998888776543 22   2       11 11  233210112222233


Q ss_pred             HHHHHcCCccEEEeCCcc
Q 033624           95 KAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~  112 (115)
                      ++..  +.+|++|+++|.
T Consensus       257 ~~~~--~g~D~vid~~g~  272 (374)
T 1cdo_A          257 KMTN--GGVDFSLECVGN  272 (374)
T ss_dssp             HHHT--SCBSEEEECSCC
T ss_pred             HHhC--CCCCEEEECCCC
Confidence            3222  479999999874

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.62  E-value=0.0001  Score=50.20  Aligned_cols=39  Identities=26%  Similarity=0.370  Sum_probs=34.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLK   55 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~   55 (115)
                      .|.+++|+|+ +++|...++.+...|+ +|+++++++++.+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~  203 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLA  203 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            6889999999 9999999998888999 8999998876544

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.61  E-value=0.00037  Score=47.73  Aligned_cols=43  Identities=19%  Similarity=0.183  Sum_probs=37.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      .|.+++|+|+ +++|...++.+...|++|+++++++++.+.+.+
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~  221 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK  221 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            4889999999 999999999888899999999998887765543

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.60  E-value=0.00065  Score=46.77  Aligned_cols=74  Identities=16%  Similarity=0.171  Sum_probs=51.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .|.+++|+|+ +++|...++.+...|++|+++++++++.+.+.+ +-          ...   ..|.. +.+.+    ++
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~-lG----------a~~---vi~~~-~~~~~----~~  253 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-LG----------ADE---VVNSR-NADEM----AA  253 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HT----------CSE---EEETT-CHHHH----HT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC----------CcE---Eeccc-cHHHH----HH
Confidence            4889999997 899999998888899999999998888765543 31          111   13442 33222    22


Q ss_pred             HHHHcCCccEEEeCCcc
Q 033624           96 AWEAFGRVDALVNNAGI  112 (115)
Q Consensus        96 ~~~~~~~id~li~naG~  112 (115)
                      +   .+.+|++|.++|.
T Consensus       254 ~---~~g~Dvvid~~g~  267 (369)
T 1uuf_A          254 H---LKSFDFILNTVAA  267 (369)
T ss_dssp             T---TTCEEEEEECCSS
T ss_pred             h---hcCCCEEEECCCC
Confidence            2   1579999999885

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.58  E-value=0.0004  Score=47.96  Aligned_cols=43  Identities=23%  Similarity=0.294  Sum_probs=36.0

Q ss_pred             CCcEEEEec-CCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           16 NEKVVMVTG-ASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        16 ~~~~~lvtG-~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      .|.+++|.| +++++|...++.+...|++|+++++++++.+.+.
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~  213 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK  213 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            467889986 8999999999988889999999998887766543

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.57  E-value=0.0016  Score=44.52  Aligned_cols=41  Identities=24%  Similarity=0.273  Sum_probs=34.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~   57 (115)
                      .|.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a  212 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA  212 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            4789999996 8999999888888899 899999887765543

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.57  E-value=0.00069  Score=46.37  Aligned_cols=78  Identities=18%  Similarity=0.155  Sum_probs=51.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHh-CCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      .|.+++|+|+ +++|...++.+... |++|+++++++++.+.+. .+   +       ...   ..|.. +.  +...+.
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~l---G-------a~~---vi~~~-~~--~~~~v~  247 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RL---G-------ADH---VVDAR-RD--PVKQVM  247 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HT---T-------CSE---EEETT-SC--HHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hh---C-------CCE---EEecc-ch--HHHHHH
Confidence            4889999999 89999999888888 999999998877665443 22   2       111   13443 32  222222


Q ss_pred             HHHHHcCCccEEEeCCcc
Q 033624           95 KAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~  112 (115)
                      ++.. ...+|++|.++|.
T Consensus       248 ~~~~-g~g~Dvvid~~G~  264 (359)
T 1h2b_A          248 ELTR-GRGVNVAMDFVGS  264 (359)
T ss_dssp             HHTT-TCCEEEEEESSCC
T ss_pred             HHhC-CCCCcEEEECCCC
Confidence            2211 1269999999884

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.55  E-value=0.00035  Score=47.96  Aligned_cols=42  Identities=24%  Similarity=0.333  Sum_probs=35.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLC   58 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~   58 (115)
                      .|.+++|+|+ +++|...++.+...|+ +|+++++++++.+.+.
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~  232 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK  232 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            4789999996 9999999998888899 7999998888776544

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=97.54  E-value=0.00016  Score=49.49  Aligned_cols=38  Identities=21%  Similarity=0.271  Sum_probs=32.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR   53 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   53 (115)
                      .|.+++|+|++|++|...++.....|++++++.++.+.
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPD  204 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccc
Confidence            48899999999999999988888889998877765443

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=97.52  E-value=0.00097  Score=45.36  Aligned_cols=45  Identities=20%  Similarity=0.202  Sum_probs=35.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCC-------eEEEEecc----cchHHHHHHHhh
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGC-------RIVAAARR----VDRLKSLCDEIN   62 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~-------~v~~~~r~----~~~~~~~~~~~~   62 (115)
                      .+++|||++|++|..++..|+.+|.       .|++++++    .++.+.....+.
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~   61 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEID   61 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHh
Confidence            4799999999999999999999885       68898887    444444344454

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.52  E-value=0.00043  Score=47.60  Aligned_cols=41  Identities=20%  Similarity=0.225  Sum_probs=35.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~   57 (115)
                      .|.+++|+|+ +++|...++.+...|+ +|+++++++++.+.+
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a  236 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA  236 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            4789999995 9999999988888899 799999888877654

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.50  E-value=0.00024  Score=48.82  Aligned_cols=42  Identities=14%  Similarity=0.278  Sum_probs=34.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHH-hCCeEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAK-AGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~~   57 (115)
                      .|.+++|+|++|++|...++.+.. .|++|+++++++++.+.+
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~  213 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV  213 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH
Confidence            578999999999999988776665 488999999987766544

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.50  E-value=0.00051  Score=47.22  Aligned_cols=41  Identities=22%  Similarity=0.364  Sum_probs=35.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~   57 (115)
                      .|.+++|+|+ +++|...++.+...|+ +|+++++++++.+.+
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~  232 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA  232 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            4789999995 9999999998888999 799999888877654

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=97.49  E-value=0.0014  Score=45.51  Aligned_cols=41  Identities=17%  Similarity=0.212  Sum_probs=34.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~   57 (115)
                      .|.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~  254 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA  254 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            4889999998 8999999888888999 899888887766543

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=97.49  E-value=0.00027  Score=48.67  Aligned_cols=40  Identities=18%  Similarity=0.252  Sum_probs=34.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKS   56 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~   56 (115)
                      .|.+++|+|+ +++|...++.+...|+ +|+++++++++++.
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~  233 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYET  233 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence            4789999998 9999999988888999 79999988887663

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.47  E-value=0.00072  Score=46.24  Aligned_cols=75  Identities=12%  Similarity=0.115  Sum_probs=50.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .|.+++|+|+ +++|...++.+...|++|+++++++++.+.+.+.+   +       ... .  .|.. +.+.+      
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l---G-------a~~-v--i~~~-~~~~~------  238 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL---G-------ADD-Y--VIGS-DQAKM------  238 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS---C-------CSC-E--EETT-CHHHH------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc---C-------Cce-e--eccc-cHHHH------
Confidence            5889999995 99999999988889999999999887665443222   2       111 1  2432 33222      


Q ss_pred             HHHHcCCccEEEeCCcc
Q 033624           96 AWEAFGRVDALVNNAGI  112 (115)
Q Consensus        96 ~~~~~~~id~li~naG~  112 (115)
                       .+..+.+|++|.++|.
T Consensus       239 -~~~~~g~D~vid~~g~  254 (357)
T 2cf5_A          239 -SELADSLDYVIDTVPV  254 (357)
T ss_dssp             -HHSTTTEEEEEECCCS
T ss_pred             -HHhcCCCCEEEECCCC
Confidence             1223479999999984

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.46  E-value=0.00035  Score=44.17  Aligned_cols=42  Identities=31%  Similarity=0.518  Sum_probs=35.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE   60 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   60 (115)
                      ++.|+|++|.+|..+++.|++.|++|++++|+++..+...+.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            578899899999999999999999999999988776655443

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.45  E-value=0.0013  Score=44.71  Aligned_cols=42  Identities=26%  Similarity=0.207  Sum_probs=36.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHh--CCeEEEEecccchHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKA--GCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~   58 (115)
                      .|.+++|+|+ +++|...++.+...  |++|+++++++++.+.+.
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~  213 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL  213 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH
Confidence            5889999999 89999999988888  999999998887765443

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.44  E-value=0.0012  Score=45.41  Aligned_cols=40  Identities=18%  Similarity=0.128  Sum_probs=33.8

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK   55 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   55 (115)
                      ..|.+++|+|+++++|...++.....|++|+++. ++++.+
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~  202 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD  202 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH
Confidence            3588999999999999999998888999988876 555554

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.42  E-value=0.00089  Score=45.52  Aligned_cols=35  Identities=14%  Similarity=0.155  Sum_probs=31.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhC--CeEEEEecccc
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVD   52 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g--~~v~~~~r~~~   52 (115)
                      .+++|||++|.+|..++..|+.+|  ..|++++++++
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~   45 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA   45 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc
Confidence            479999999999999999999988  67989887765

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=97.42  E-value=0.00098  Score=47.14  Aligned_cols=39  Identities=23%  Similarity=0.231  Sum_probs=33.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   52 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~   52 (115)
                      .++.+++++|.|. |+.|.++|+.|.++|++|.+.+++..
T Consensus         5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~   43 (451)
T 3lk7_A            5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPF   43 (451)
T ss_dssp             CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCG
T ss_pred             hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence            3467899999998 77888899999999999999998653

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=97.41  E-value=0.00055  Score=47.04  Aligned_cols=42  Identities=21%  Similarity=0.324  Sum_probs=35.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLC   58 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~   58 (115)
                      .|.+++|+|+ +++|...++.....|+ +|+++++++++.+.+.
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~  233 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI  233 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH
Confidence            4789999995 9999999988888899 7999988888776543

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.41  E-value=0.00099  Score=43.67  Aligned_cols=35  Identities=37%  Similarity=0.508  Sum_probs=29.3

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecc
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   50 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~   50 (115)
                      +.+.+++|.|+ ||+|..+++.|+..|. ++.+++++
T Consensus        26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            45789999998 7899999999999997 67777553

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.41  E-value=0.00051  Score=45.63  Aligned_cols=43  Identities=19%  Similarity=0.332  Sum_probs=39.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHh
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~   61 (115)
                      +++++|.|+ ||.|++++..|++.|.+|.++.|+.++.+++. .+
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~  160 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL  160 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC
Confidence            889999997 99999999999999999999999999888776 44

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=97.37  E-value=0.00071  Score=46.24  Aligned_cols=40  Identities=18%  Similarity=0.237  Sum_probs=33.1

Q ss_pred             CcEEEEecCCChHHHHH-HHHH-HHhCCe-EEEEecccc---hHHHH
Q 033624           17 EKVVMVTGASSGLGREF-CLDL-AKAGCR-IVAAARRVD---RLKSL   57 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~-a~~l-~~~g~~-v~~~~r~~~---~~~~~   57 (115)
                      +.+++|+|+ |++|... ++.+ ...|++ |++++++++   +.+.+
T Consensus       173 ~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~  218 (357)
T 2b5w_A          173 PSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII  218 (357)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH
Confidence            389999999 9999998 7776 678997 999998877   65543

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.37  E-value=0.00021  Score=47.77  Aligned_cols=44  Identities=16%  Similarity=0.305  Sum_probs=37.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLC   58 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~   58 (115)
                      ++.+++++|+|+ ||.|++++..|.+.|+ +|.++.|+.++.+++.
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La  163 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIY  163 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHC
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            467999999998 6999999999999998 8999999987665543

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.37  E-value=0.0057  Score=40.52  Aligned_cols=42  Identities=24%  Similarity=0.266  Sum_probs=35.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE   60 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   60 (115)
                      +++.|.|+ |.+|..+|..|++.|++|++++++++..+...+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            56777776 8899999999999999999999998877665554

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=97.35  E-value=0.0034  Score=43.06  Aligned_cols=41  Identities=22%  Similarity=0.202  Sum_probs=34.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~   57 (115)
                      .|.+++|+|+ +++|...++.+...|+ +|+++++++++.+.+
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a  231 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA  231 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH
Confidence            4789999995 8999999988888899 588888887766544

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.34  E-value=0.00018  Score=43.03  Aligned_cols=44  Identities=14%  Similarity=0.356  Sum_probs=39.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHh
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~   61 (115)
                      +++++|.|+ |++|..+++.|.+.|++|++++|+.++.+.+.+.+
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~   64 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY   64 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh
Confidence            789999997 99999999999999999999999988887766655

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.32  E-value=0.0006  Score=46.91  Aligned_cols=40  Identities=15%  Similarity=0.200  Sum_probs=33.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKS   56 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~   56 (115)
                      .|.+++|+|+ |++|...++.+...|+ +|+++++++++.+.
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~  222 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRL  222 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            4889999998 8999999988888999 78888888776553

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.29  E-value=0.0022  Score=44.84  Aligned_cols=42  Identities=21%  Similarity=0.141  Sum_probs=37.4

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      +.+++++|+|+ |.+|..+++.+...|++|++++++.+..+.+
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            56899999997 8999999999999999999999998877654

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=97.29  E-value=0.0025  Score=43.40  Aligned_cols=41  Identities=22%  Similarity=0.170  Sum_probs=33.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~   57 (115)
                      .|.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~  207 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA  207 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH
Confidence            4788999985 8999999888888899 799998887766543

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.29  E-value=0.0082  Score=39.70  Aligned_cols=88  Identities=15%  Similarity=0.150  Sum_probs=53.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCC--CccceEEEEeecCCCHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSP--DSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .++.|.|++|.+|..++..|.+.|++|++++|+++..+.+.+ .........+  ....+.++  -+  .+..+..++++
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~-~g~~~~~~~~~~~~aDvVi~--av--~~~~~~~v~~~   86 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG-MGIPLTDGDGWIDEADVVVL--AL--PDNIIEKVAED   86 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH-TTCCCCCSSGGGGTCSEEEE--CS--CHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh-cCCCcCCHHHHhcCCCEEEE--cC--CchHHHHHHHH
Confidence            478999999999999999999999999999998877665543 1100000000  01122222  22  45557777777


Q ss_pred             HHHHcCCccEEEeCC
Q 033624           96 AWEAFGRVDALVNNA  110 (115)
Q Consensus        96 ~~~~~~~id~li~na  110 (115)
                      +.....+=.++|+++
T Consensus        87 l~~~l~~~~ivv~~s  101 (286)
T 3c24_A           87 IVPRVRPGTIVLILD  101 (286)
T ss_dssp             HGGGSCTTCEEEESC
T ss_pred             HHHhCCCCCEEEECC
Confidence            655443323556543

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.27  E-value=0.001  Score=44.77  Aligned_cols=35  Identities=17%  Similarity=0.352  Sum_probs=31.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      .|.+++|+|+++++|...++.+...|++|+++.++
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~  186 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK  186 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc
Confidence            58899999999999999999988999999888744

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.24  E-value=0.001  Score=46.51  Aligned_cols=47  Identities=28%  Similarity=0.538  Sum_probs=40.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHh
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~   61 (115)
                      .+.|++++|.|+ |++|..+++.+...|+ +|++++|+.++.++..+.+
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~  211 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL  211 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            367999999998 9999999999999998 8999999987765555554

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=97.23  E-value=0.0038  Score=42.35  Aligned_cols=41  Identities=27%  Similarity=0.292  Sum_probs=33.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHh-CCeEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~   57 (115)
                      .|.+++|+|+ +++|...++.+... +++|+++++++++.+.+
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~  212 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA  212 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence            4889999998 99999988877777 77899999888776644

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=97.22  E-value=0.00059  Score=46.40  Aligned_cols=39  Identities=23%  Similarity=0.215  Sum_probs=35.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   52 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~   52 (115)
                      ++.|++++|.|++.-+|+.+|+.|+..|++|.++.|+..
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~  212 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNI  212 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEE
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchH
Confidence            688999999999777899999999999999999988743

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=97.20  E-value=0.00076  Score=45.50  Aligned_cols=42  Identities=36%  Similarity=0.425  Sum_probs=36.2

Q ss_pred             Cc-EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           17 EK-VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        17 ~~-~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      |. +++|+|+++++|...++.+...|++|+++++++++.+.+.
T Consensus       150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~  192 (330)
T 1tt7_A          150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK  192 (330)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH
T ss_pred             CCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            44 7999999999999999988889999999999887766543

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.17  E-value=0.0037  Score=41.79  Aligned_cols=81  Identities=14%  Similarity=0.081  Sum_probs=51.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      .+++.|.||.|.+|.+++..|.+.|++|++++|+++.  ...+.+..         ..+.++.+    .+..+..++.++
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~--~~~~~~~~---------aDvVilav----p~~~~~~vl~~l   85 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA--VAESILAN---------ADVVIVSV----PINLTLETIERL   85 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG--GHHHHHTT---------CSEEEECS----CGGGHHHHHHHH
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc--CHHHHhcC---------CCEEEEeC----CHHHHHHHHHHH
Confidence            4578899988999999999999999999999987653  11222221         23444333    233466666665


Q ss_pred             HHHcCCccEEEeCCcc
Q 033624           97 WEAFGRVDALVNNAGI  112 (115)
Q Consensus        97 ~~~~~~id~li~naG~  112 (115)
                      .....+=.++++.+++
T Consensus        86 ~~~l~~~~iv~~~~sv  101 (298)
T 2pv7_A           86 KPYLTENMLLADLTSV  101 (298)
T ss_dssp             GGGCCTTSEEEECCSC
T ss_pred             HhhcCCCcEEEECCCC
Confidence            4433322355555554

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=97.16  E-value=0.0051  Score=41.56  Aligned_cols=92  Identities=13%  Similarity=0.080  Sum_probs=55.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC--eEEEEecccchHHHHHHHhhC-C-CCCCCC---CccceEEEEeecCCCHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINK-P-GMVGSP---DSVRAVAVELDVCADGAT   88 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~-~-~~~~~~---~~~~~~~~~~di~~~~~~   88 (115)
                      ..+++.|.| .|.+|.++++.|.+.|+  +|++++|+++..+.+.+.-.. . .....+   ....+.++.+    .+..
T Consensus        32 ~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilav----p~~~  106 (314)
T 3ggo_A           32 SMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSS----PVRT  106 (314)
T ss_dssp             SCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECS----CGGG
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeC----CHHH
Confidence            346888998 59999999999999999  899999998776654432100 0 000000   0122333322    3445


Q ss_pred             HHHHHHHHHHHcCCccEEEeCCcc
Q 033624           89 IEISVQKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        89 ~~~~~~~~~~~~~~id~li~naG~  112 (115)
                      +..++.++.....+=-+++.++++
T Consensus       107 ~~~vl~~l~~~l~~~~iv~d~~Sv  130 (314)
T 3ggo_A          107 FREIAKKLSYILSEDATVTDQGSV  130 (314)
T ss_dssp             HHHHHHHHHHHSCTTCEEEECCSC
T ss_pred             HHHHHHHHhhccCCCcEEEECCCC
Confidence            666777766555443466666654

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=97.16  E-value=0.0011  Score=44.53  Aligned_cols=42  Identities=33%  Similarity=0.387  Sum_probs=36.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      ++ ++|+|+++++|...++.+...|++|+++++++++.+.+.+
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~  189 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS  189 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence            45 9999999999999999888999999999998887765543

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.15  E-value=0.00076  Score=45.48  Aligned_cols=42  Identities=33%  Similarity=0.419  Sum_probs=36.1

Q ss_pred             Cc-EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           17 EK-VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        17 ~~-~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      |. +++|+|+++++|...++.+...|++|+++++++++.+.+.
T Consensus       149 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~  191 (328)
T 1xa0_A          149 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR  191 (328)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH
T ss_pred             CCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            44 7999999999999999988889999999999887766543

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=97.14  E-value=0.0034  Score=43.01  Aligned_cols=35  Identities=23%  Similarity=0.293  Sum_probs=30.1

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecc
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   50 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~   50 (115)
                      +.+.+++|.|+ ||+|..+++.|+..|. ++.+++++
T Consensus        32 L~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D   67 (340)
T 3rui_A           32 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG   67 (340)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             HhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCC
Confidence            45789999998 8999999999999997 67787764

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=97.14  E-value=0.0027  Score=43.98  Aligned_cols=40  Identities=23%  Similarity=0.311  Sum_probs=34.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKS   56 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~   56 (115)
                      .|.+++|.|+ |++|...++.+...|+ +|+++++++++.+.
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~  225 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKL  225 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH
Confidence            4889999996 9999998888888899 89999988776554

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.13  E-value=0.00067  Score=43.62  Aligned_cols=39  Identities=26%  Similarity=0.184  Sum_probs=32.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      .++++|.|+ |.+|..+++.|.+.|+ |++++++++..+.+
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~   47 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVL   47 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHH
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHH
Confidence            457899997 8999999999999999 99999988766543

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.12  E-value=0.0032  Score=44.19  Aligned_cols=41  Identities=20%  Similarity=0.286  Sum_probs=35.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      +.+++|.|. |.+|..+++.|.+.|..|++++++++..+.+.
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~   44 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR   44 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence            346889987 88999999999999999999999988776554

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=97.09  E-value=0.004  Score=43.07  Aligned_cols=41  Identities=20%  Similarity=0.217  Sum_probs=33.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~   57 (115)
                      .|.+++|.|+ |++|...++.....|+ +|+++++++++++.+
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a  226 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA  226 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH
Confidence            4889999995 9999998888888899 688888887766544

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=97.08  E-value=0.0018  Score=44.74  Aligned_cols=47  Identities=19%  Similarity=0.352  Sum_probs=40.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHh
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~   61 (115)
                      ++.|+++.|.|. |.+|..+|+.|.+.|++|++.+++.+++++..+.+
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            578999999997 88999999999999999999999887777666654

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.07  E-value=0.014  Score=40.56  Aligned_cols=44  Identities=11%  Similarity=0.141  Sum_probs=38.8

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      +.+.+++|+|+ |.+|..+++.+...|++|++++++.+..+.+.+
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  225 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS  225 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            46789999999 899999999999999999999999988776554

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=97.05  E-value=0.0015  Score=43.64  Aligned_cols=45  Identities=27%  Similarity=0.345  Sum_probs=38.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      .++.|++++|.|.++-+|+.++..|++.|++|.++.++...+.+.
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~~~  200 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLY  200 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Confidence            357899999999988899999999999999999998776655543

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=96.99  E-value=0.0056  Score=41.13  Aligned_cols=37  Identities=22%  Similarity=0.223  Sum_probs=30.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCC--eEEEEec--ccchHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGC--RIVAAAR--RVDRLK   55 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r--~~~~~~   55 (115)
                      +++|||++|.+|..++..|+.++.  .++++++  +.+.++
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~   42 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTV   42 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHH
Confidence            689999999999999999998875  5888888  655443

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.97  E-value=0.005  Score=45.25  Aligned_cols=35  Identities=23%  Similarity=0.293  Sum_probs=30.4

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecc
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   50 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~   50 (115)
                      +.+.+++|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus       324 L~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D  359 (615)
T 4gsl_A          324 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG  359 (615)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            45788999998 8999999999999997 68888774

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=96.97  E-value=0.0053  Score=41.40  Aligned_cols=36  Identities=33%  Similarity=0.453  Sum_probs=29.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCC--eEEEEec--ccchH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGC--RIVAAAR--RVDRL   54 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r--~~~~~   54 (115)
                      +++|||++|++|..++..|+.++.  .+.++++  +.+..
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~   41 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKL   41 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHH
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhh
Confidence            589999999999999999998874  5788887  54433

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.97  E-value=0.0029  Score=42.36  Aligned_cols=43  Identities=21%  Similarity=0.264  Sum_probs=37.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      .++.++++.|.|. |.+|+.+++.+...|++|++++|+.++.+.
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~  195 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLAR  195 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            4678999999997 999999999999999999999998765443

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.95  E-value=0.0054  Score=39.59  Aligned_cols=40  Identities=23%  Similarity=0.326  Sum_probs=34.9

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   52 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~   52 (115)
                      +.++.++.++|.|+ |.+|...++.|++.|+.|++++.+..
T Consensus        26 fl~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~   65 (223)
T 3dfz_A           26 MLDLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVS   65 (223)
T ss_dssp             EECCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCC
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            35788999999998 68999999999999999999987643

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.95  E-value=0.013  Score=39.98  Aligned_cols=50  Identities=16%  Similarity=0.278  Sum_probs=39.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCC--eEEEEecccchHHHHHHHhhC
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINK   63 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~   63 (115)
                      ++..++++.|+|+ |.+|..++..|+..|.  .+++++++++..+.....+..
T Consensus         5 ~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~   56 (326)
T 3vku_A            5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLED   56 (326)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHT
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhh
Confidence            3445678999996 9999999999999887  799999988777665555554

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.94  E-value=0.0029  Score=42.14  Aligned_cols=46  Identities=15%  Similarity=0.281  Sum_probs=39.5

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE   60 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   60 (115)
                      +.|++++|.|.++-+|+.++..|.+.|++|.++.++...+.+..+.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~~~~~~  193 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGSMTRS  193 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHHHHH
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHHHhhcc
Confidence            7899999999988899999999999999999998776666655443

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.92  E-value=0.0062  Score=40.69  Aligned_cols=41  Identities=17%  Similarity=0.098  Sum_probs=34.7

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      .++.|.|. |.+|..++..|++.|++|++++|+++..+.+.+
T Consensus         8 ~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~   48 (303)
T 3g0o_A            8 FHVGIVGL-GSMGMGAARSCLRAGLSTWGADLNPQACANLLA   48 (303)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Confidence            46777765 899999999999999999999999887766554

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.89  E-value=0.00096  Score=44.19  Aligned_cols=43  Identities=28%  Similarity=0.481  Sum_probs=36.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      .+.+++++|.|+ |++|+++++.|.+.|++|.+++|+.++.+++
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l  168 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKL  168 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHH
Confidence            456889999997 7999999999999999999999987665544

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.89  E-value=0.0037  Score=41.72  Aligned_cols=41  Identities=24%  Similarity=0.353  Sum_probs=36.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK   55 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   55 (115)
                      ++.|+++.|.|. |.||+.+++.+...|++|++++|+.++.+
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~  192 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLA  192 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence            578999999996 89999999999999999999999876544

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.88  E-value=0.0029  Score=41.48  Aligned_cols=46  Identities=30%  Similarity=0.450  Sum_probs=38.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHh
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~   61 (115)
                      ++.+ +++|.|+ |++|+++++.|.+.|++|.+++|+.++.+++.+.+
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~  159 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF  159 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence            4668 8999997 88999999999999999999999987766665543

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.87  E-value=0.01  Score=38.73  Aligned_cols=90  Identities=16%  Similarity=0.213  Sum_probs=55.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCe-EEEEecccchHHHHHHHhhCCC---CCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKPG---MVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .++.|.|+ |.+|..++..|.+.|++ |.+++|+++..+.+.+.+....   ....-....+.++.    ..+..+..++
T Consensus        11 m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~a----v~~~~~~~v~   85 (266)
T 3d1l_A           11 TPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVS----LKDSAFAELL   85 (266)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEEC----CCHHHHHHHH
T ss_pred             CeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEe----cCHHHHHHHH
Confidence            36888887 89999999999999998 8889999887776665432100   00000111222221    2455667777


Q ss_pred             HHHHHHcCCccEEEeCCcc
Q 033624           94 QKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~  112 (115)
                      +++.....+=.++|++++.
T Consensus        86 ~~l~~~~~~~~ivv~~s~~  104 (266)
T 3d1l_A           86 QGIVEGKREEALMVHTAGS  104 (266)
T ss_dssp             HHHHTTCCTTCEEEECCTT
T ss_pred             HHHHhhcCCCcEEEECCCC
Confidence            7765544333467777553

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.84  E-value=0.0036  Score=42.58  Aligned_cols=42  Identities=21%  Similarity=0.207  Sum_probs=36.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      .|.+++|+|+ +++|...++.+...|++|+++++++++.+.+.
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~  217 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL  217 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence            5889999997 99999999888889999999999988876543

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.83  E-value=0.0038  Score=41.76  Aligned_cols=46  Identities=30%  Similarity=0.441  Sum_probs=38.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      .++.|++++|.|.++-+|+.++..|+..|++|.++.+....+.+..
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~~~~  202 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLADHV  202 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHHHHH
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHHHHh
Confidence            3578999999999888999999999999999999877655555443

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.79  E-value=0.0033  Score=44.67  Aligned_cols=42  Identities=24%  Similarity=0.397  Sum_probs=36.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHh
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~   61 (115)
                      +++|.|+ |-+|..+|+.|.+.|+.|++++++++.++.+.+.+
T Consensus         5 ~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~   46 (461)
T 4g65_A            5 KIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY   46 (461)
T ss_dssp             EEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc
Confidence            5788887 88999999999999999999999998887766554

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.78  E-value=0.0032  Score=42.31  Aligned_cols=41  Identities=20%  Similarity=0.324  Sum_probs=34.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      ..++.|.|. |.+|..++..|++.|++|++++|+++..+.+.
T Consensus        21 m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~   61 (310)
T 3doj_A           21 MMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKCDELV   61 (310)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence            456778875 89999999999999999999999988766554

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.75  E-value=0.0031  Score=41.81  Aligned_cols=45  Identities=20%  Similarity=0.335  Sum_probs=39.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHh
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~   61 (115)
                      .+++++|.|+ ||.+++++..|.+.|+ +|.++.|+.++.+++.+.+
T Consensus       118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~  163 (271)
T 1npy_A          118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY  163 (271)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            4678999987 8999999999999997 7999999988888777665

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.75  E-value=0.018  Score=39.72  Aligned_cols=39  Identities=18%  Similarity=0.239  Sum_probs=33.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   52 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~   52 (115)
                      ..+.+++++|.|+ |.+|+.+++.+.+.|++|++++.++.
T Consensus         8 ~~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~   46 (377)
T 3orq_A            8 KLKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSED   46 (377)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCC
Confidence            3456899999987 77999999999999999999886543

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.75  E-value=0.0051  Score=41.43  Aligned_cols=43  Identities=16%  Similarity=0.158  Sum_probs=36.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK   55 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   55 (115)
                      .++.|++++|.|.++-+|+.++..|.+.|++|.++.+....+.
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~  203 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED  203 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch
Confidence            3578999999999888999999999999999999987555444

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.74  E-value=0.004  Score=41.67  Aligned_cols=45  Identities=24%  Similarity=0.239  Sum_probs=37.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      .++.|++++|.|.++-+|+.++..|...|++|.++.+....+.+.
T Consensus       157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~  201 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSH  201 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHH
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHHh
Confidence            357899999999988899999999999999999987765555443

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.73  E-value=0.0048  Score=41.31  Aligned_cols=46  Identities=28%  Similarity=0.414  Sum_probs=39.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      ++.|++++|.|++.-+|+.++..|+..|++|.++.+....+.+..+
T Consensus       156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~~  201 (288)
T 1b0a_A          156 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVE  201 (288)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHHH
T ss_pred             CCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHHHhc
Confidence            5789999999998888999999999999999999877766665544

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.72  E-value=0.0051  Score=40.74  Aligned_cols=91  Identities=19%  Similarity=0.225  Sum_probs=53.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCC--CccceEEEEeecCCCHHHHHHHH--
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSP--DSVRAVAVELDVCADGATIEISV--   93 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~di~~~~~~~~~~~--   93 (115)
                      +++.|.|. |.+|..++..|++.|++|++++|+++..+.+.+.--.......+  ....+.++  -+ .++..++.++  
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~--~v-p~~~~~~~v~~~   77 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFA--ML-ADPAAAEEVCFG   77 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEE--CC-SSHHHHHHHHHS
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEE--Ec-CCHHHHHHHHcC
Confidence            35777876 89999999999999999999999988766554320000000000  01122222  22 2355666666  


Q ss_pred             -HHHHHHcCCccEEEeCCcc
Q 033624           94 -QKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        94 -~~~~~~~~~id~li~naG~  112 (115)
                       +.+.....+=.++|++.++
T Consensus        78 ~~~l~~~l~~~~~vi~~st~   97 (287)
T 3pef_A           78 KHGVLEGIGEGRGYVDMSTV   97 (287)
T ss_dssp             TTCHHHHCCTTCEEEECSCC
T ss_pred             cchHhhcCCCCCEEEeCCCC
Confidence             5555554444567776554

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.70  E-value=0.0036  Score=42.25  Aligned_cols=88  Identities=18%  Similarity=0.204  Sum_probs=53.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCC------CccceEEEEeecCCCHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSP------DSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~di~~~~~~~~   90 (115)
                      ..++.|.|. |.+|..+++.|++.|++|++++|+++..+.+.+.    +-....      ....+.+..  + .++..++
T Consensus        31 ~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~----g~~~~~~~~e~~~~aDvVi~~--v-p~~~~~~  102 (320)
T 4dll_A           31 ARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAAL----GATIHEQARAAARDADIVVSM--L-ENGAVVQ  102 (320)
T ss_dssp             CSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT----TCEEESSHHHHHTTCSEEEEC--C-SSHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHC----CCEeeCCHHHHHhcCCEEEEE--C-CCHHHHH
Confidence            457888876 8899999999999999999999998776654321    100000      012232222  2 2455666


Q ss_pred             HHHH--HHHHHcCCccEEEeCCcc
Q 033624           91 ISVQ--KAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        91 ~~~~--~~~~~~~~id~li~naG~  112 (115)
                      .++.  .+.....+=.++|++..+
T Consensus       103 ~v~~~~~~~~~l~~~~~vi~~st~  126 (320)
T 4dll_A          103 DVLFAQGVAAAMKPGSLFLDMASI  126 (320)
T ss_dssp             HHHTTTCHHHHCCTTCEEEECSCC
T ss_pred             HHHcchhHHhhCCCCCEEEecCCC
Confidence            6665  454555445667766543

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.68  E-value=0.0074  Score=41.47  Aligned_cols=35  Identities=26%  Similarity=0.488  Sum_probs=30.2

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecc
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   50 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~   50 (115)
                      +.+.+++|.|+ ||+|..+++.|+..|. ++.+++++
T Consensus       116 L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D  151 (353)
T 3h5n_A          116 LKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDND  151 (353)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCC
Confidence            45778999988 8999999999999997 68888765

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.68  E-value=0.0051  Score=41.20  Aligned_cols=41  Identities=12%  Similarity=0.124  Sum_probs=35.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      .|.+++|+|+ |++|...++.....|++|++++ ++++.+.+.
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~  182 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAA  182 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHH
Confidence            4889999999 9999999988888999999999 777766543

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=96.65  E-value=0.023  Score=38.35  Aligned_cols=42  Identities=24%  Similarity=0.347  Sum_probs=33.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHhC--CeEEEEecccchHHHHHHHhh
Q 033624           19 VVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~   62 (115)
                      ++.|+|++|.+|..++..|+..|  ..|+++++++  .+.....+.
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~   45 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLS   45 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHT
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHh
Confidence            58899999999999999999888  5799999887  333334444

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.61  E-value=0.0054  Score=41.30  Aligned_cols=45  Identities=13%  Similarity=0.136  Sum_probs=38.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      ++.|++++|.|++.-+|+.++..|+..|++|.++.+....+.+..
T Consensus       162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~  206 (301)
T 1a4i_A          162 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEV  206 (301)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHHHHh
Confidence            578999999999888999999999999999999877766554433

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.59  E-value=0.029  Score=39.35  Aligned_cols=44  Identities=16%  Similarity=0.187  Sum_probs=38.3

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      ..+.+++|+|+ |.+|..+++.+...|++|++++++....+.+.+
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  231 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS  231 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            45789999999 899999999999999999999999887766544

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=96.58  E-value=0.03  Score=37.79  Aligned_cols=40  Identities=20%  Similarity=0.215  Sum_probs=31.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeE-EEEecccchHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRI-VAAARRVDRLKS   56 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v-~~~~r~~~~~~~   56 (115)
                      .|.+++|.|+ +++|...++.+...|+.+ +++++++++.+.
T Consensus       160 ~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~  200 (346)
T 4a2c_A          160 ENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLAL  200 (346)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred             CCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHH
Confidence            5889999987 899999998888899875 566777665543

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.57  E-value=0.013  Score=43.06  Aligned_cols=36  Identities=22%  Similarity=0.250  Sum_probs=30.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecc
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   50 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~   50 (115)
                      .+.+.+++|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus       324 kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D  360 (598)
T 3vh1_A          324 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG  360 (598)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            345788999988 8999999999999997 68888553

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=96.55  E-value=0.033  Score=36.46  Aligned_cols=88  Identities=14%  Similarity=0.144  Sum_probs=52.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCC---CCCCCC-CccceEEEEeecCCCHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKP---GMVGSP-DSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      ++.|.| .|.+|..++..|.+.|++|++++|+++..+.+.+ ....   .....+ ....+.++.    ..+..+..++.
T Consensus         2 ~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~D~vi~a----v~~~~~~~~~~   75 (279)
T 2f1k_A            2 KIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVE-RQLVDEAGQDLSLLQTAKIIFLC----TPIQLILPTLE   75 (279)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTSCSEEESCGGGGTTCSEEEEC----SCHHHHHHHHH
T ss_pred             EEEEEc-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-CCCCccccCCHHHhCCCCEEEEE----CCHHHHHHHHH
Confidence            467888 5999999999999999999999998877665432 1110   000000 111222222    24566777777


Q ss_pred             HHHHHcCCccEEEeCCcc
Q 033624           95 KAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~  112 (115)
                      ++.....+=.++++.+++
T Consensus        76 ~l~~~~~~~~~vv~~~~~   93 (279)
T 2f1k_A           76 KLIPHLSPTAIVTDVASV   93 (279)
T ss_dssp             HHGGGSCTTCEEEECCSC
T ss_pred             HHHhhCCCCCEEEECCCC
Confidence            765544333456665443

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.54  E-value=0.014  Score=38.76  Aligned_cols=89  Identities=13%  Similarity=0.191  Sum_probs=55.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCC---eEEEEecccchHHHHHHHhhCCCCCCC---CCccceEEEEeecCCCHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGC---RIVAAARRVDRLKSLCDEINKPGMVGS---PDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .++.|.|+ |.+|.+++..|++.|+   +|++++|+++..+.+.+.+.-......   -....+.++.+    .+..+..
T Consensus         4 ~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav----~p~~~~~   78 (280)
T 3tri_A            4 SNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV----KPHQIKM   78 (280)
T ss_dssp             SCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS----CGGGHHH
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe----CHHHHHH
Confidence            45778887 8999999999999998   899999999887766653211000000   00122333322    4566777


Q ss_pred             HHHHHHHH-cCCccEEEeCCc
Q 033624           92 SVQKAWEA-FGRVDALVNNAG  111 (115)
Q Consensus        92 ~~~~~~~~-~~~id~li~naG  111 (115)
                      +++++... ..+=.++|++++
T Consensus        79 vl~~l~~~~l~~~~iiiS~~a   99 (280)
T 3tri_A           79 VCEELKDILSETKILVISLAV   99 (280)
T ss_dssp             HHHHHHHHHHTTTCEEEECCT
T ss_pred             HHHHHHhhccCCCeEEEEecC
Confidence            78777655 433237777643

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=96.54  E-value=0.013  Score=49.35  Aligned_cols=45  Identities=18%  Similarity=0.335  Sum_probs=38.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE   60 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   60 (115)
                      .|.+++|.|++|++|...++.....|++|++++++.++.+.+.+.
T Consensus      1667 ~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~ 1711 (2512)
T 2vz8_A         1667 PGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQAR 1711 (2512)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred             CCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhh
Confidence            488999999999999999888888899999998887766655543

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.54  E-value=0.0079  Score=41.43  Aligned_cols=89  Identities=17%  Similarity=0.300  Sum_probs=54.5

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCC------cc---ceEEEEeecCCC
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPD------SV---RAVAVELDVCAD   85 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~------~~---~~~~~~~di~~~   85 (115)
                      +...++.|.|. |.+|..++..|++.|++|++++|+++..+.+.+.    +......      ..   ++.++.+   ..
T Consensus        20 m~~mkIgiIGl-G~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~----g~~~~~s~~e~~~~a~~~DvVi~~v---p~   91 (358)
T 4e21_A           20 FQSMQIGMIGL-GRMGADMVRRLRKGGHECVVYDLNVNAVQALERE----GIAGARSIEEFCAKLVKPRVVWLMV---PA   91 (358)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT----TCBCCSSHHHHHHHSCSSCEEEECS---CG
T ss_pred             hcCCEEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC----CCEEeCCHHHHHhcCCCCCEEEEeC---CH
Confidence            34567888875 8999999999999999999999998766554321    1000000      01   3333322   12


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEeCCcc
Q 033624           86 GATIEISVQKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        86 ~~~~~~~~~~~~~~~~~id~li~naG~  112 (115)
                      . .++.+++.+.....+=+++|.+..+
T Consensus        92 ~-~v~~vl~~l~~~l~~g~iiId~st~  117 (358)
T 4e21_A           92 A-VVDSMLQRMTPLLAANDIVIDGGNS  117 (358)
T ss_dssp             G-GHHHHHHHHGGGCCTTCEEEECSSC
T ss_pred             H-HHHHHHHHHHhhCCCCCEEEeCCCC
Confidence            2 5666777665555455677776544

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.53  E-value=0.0041  Score=40.87  Aligned_cols=41  Identities=32%  Similarity=0.517  Sum_probs=34.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKS   56 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~   56 (115)
                      .+.+ +++|.|+ ||.|++++..|.+.|+ +|.++.|+.++.++
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~  147 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKA  147 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHT
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence            3567 8999987 8999999999999998 89999998765443

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.52  E-value=0.047  Score=34.52  Aligned_cols=75  Identities=8%  Similarity=0.081  Sum_probs=47.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..+...++.|.| .|.+|..++..|++.|++|++++|+++       .++         ...+.++.+    ....++.+
T Consensus        15 ~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~-------~~~---------~aD~vi~av----~~~~~~~v   73 (209)
T 2raf_A           15 LYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ-------ATT---------LGEIVIMAV----PYPALAAL   73 (209)
T ss_dssp             -----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC-------CSS---------CCSEEEECS----CHHHHHHH
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH-------Hhc---------cCCEEEEcC----CcHHHHHH
Confidence            345677899998 599999999999999999999998866       111         123333333    35566677


Q ss_pred             HHHHHHHcCCccEEEeC
Q 033624           93 VQKAWEAFGRVDALVNN  109 (115)
Q Consensus        93 ~~~~~~~~~~id~li~n  109 (115)
                      ++++..... =.++|++
T Consensus        74 ~~~l~~~~~-~~~vi~~   89 (209)
T 2raf_A           74 AKQYATQLK-GKIVVDI   89 (209)
T ss_dssp             HHHTHHHHT-TSEEEEC
T ss_pred             HHHHHHhcC-CCEEEEE
Confidence            776654443 2345554

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.52  E-value=0.0053  Score=40.96  Aligned_cols=91  Identities=10%  Similarity=0.069  Sum_probs=55.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCC-CccceEEEEeecCCCHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSP-DSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      .++.|.|. |.+|..++..|++.|++|++++|+++..+.+.+.--.......+ ....+.+  .-+ .++..++.+++.+
T Consensus        16 ~~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~aDvvi--~~v-p~~~~~~~v~~~l   91 (296)
T 3qha_A           16 LKLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAAADLIH--ITV-LDDAQVREVVGEL   91 (296)
T ss_dssp             CCEEEECC-STTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTTSSEEE--ECC-SSHHHHHHHHHHH
T ss_pred             CeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHhCCEEE--EEC-CChHHHHHHHHHH
Confidence            45777775 88999999999999999999999988766554320000000000 0012222  222 2456677777777


Q ss_pred             HHHcCCccEEEeCCcc
Q 033624           97 WEAFGRVDALVNNAGI  112 (115)
Q Consensus        97 ~~~~~~id~li~naG~  112 (115)
                      .....+=.++|++..+
T Consensus        92 ~~~l~~g~ivv~~st~  107 (296)
T 3qha_A           92 AGHAKPGTVIAIHSTI  107 (296)
T ss_dssp             HTTCCTTCEEEECSCC
T ss_pred             HHhcCCCCEEEEeCCC
Confidence            6655455677777654

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.51  E-value=0.01  Score=39.59  Aligned_cols=39  Identities=26%  Similarity=0.256  Sum_probs=34.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      +++.|.|+ |.+|..+|..|++.|++|++++++++..+..
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~   54 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKS   54 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence            56888888 8999999999999999999999998776654

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=96.51  E-value=0.0076  Score=43.30  Aligned_cols=42  Identities=14%  Similarity=0.201  Sum_probs=36.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      .+.|++++|.|. |.||..+++.+...|++|+++++++.+...
T Consensus       271 ~l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~  312 (494)
T 3ce6_A          271 LIGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINALQ  312 (494)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            467999999997 999999999999999999999998776544

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=96.47  E-value=0.006  Score=38.85  Aligned_cols=39  Identities=23%  Similarity=0.380  Sum_probs=32.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      ..++.|+| .|.+|..+++.|.+.|++|++++|+.+..+.
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~   66 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTAR   66 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            35688888 6999999999999999999999998765543

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=96.42  E-value=0.017  Score=39.50  Aligned_cols=39  Identities=21%  Similarity=0.200  Sum_probs=35.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   52 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~   52 (115)
                      .++.|+++.|.|. |.||+++|+.+...|++|++.+|+..
T Consensus       167 ~~l~gktiGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~  205 (340)
T 4dgs_A          167 HSPKGKRIGVLGL-GQIGRALASRAEAFGMSVRYWNRSTL  205 (340)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             ccccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCcc
Confidence            4678999999998 89999999999999999999998754

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=96.41  E-value=0.04  Score=37.48  Aligned_cols=45  Identities=18%  Similarity=0.283  Sum_probs=36.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCC--eEEEEecccchHHHHHHHhh
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~   62 (115)
                      ..++.|+|+ |.+|..++..|+..|.  .|++++++.+..+.....++
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~   51 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLN   51 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHH
Confidence            457899996 9999999999999986  79999998877665444444

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=96.40  E-value=0.014  Score=40.02  Aligned_cols=48  Identities=19%  Similarity=0.252  Sum_probs=38.2

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCC--eEEEEecccchHHHHHHHhh
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~   62 (115)
                      +.++++.|+|++|.+|..++..++.+|.  .|++++.+.+..+.....+.
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~   55 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIR   55 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhh
Confidence            4567899999999999999999999884  79999998776554333343

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.39  E-value=0.0096  Score=40.33  Aligned_cols=39  Identities=23%  Similarity=0.175  Sum_probs=35.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   52 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~   52 (115)
                      ..+.|+++.|.|. |.||+.+|+.+...|++|+..+|+..
T Consensus       135 ~~l~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~  173 (315)
T 3pp8_A          135 YTREEFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRK  173 (315)
T ss_dssp             CCSTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCC
T ss_pred             CCcCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCch
Confidence            4678999999988 89999999999999999999998754

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.38  E-value=0.014  Score=39.54  Aligned_cols=37  Identities=24%  Similarity=0.167  Sum_probs=32.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK   55 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   55 (115)
                      .++++|.|. |.+|..+++.|.++|. |++++++++..+
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~  151 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK  151 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh
Confidence            457999997 8999999999999999 999999988776

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=96.36  E-value=0.01  Score=38.51  Aligned_cols=41  Identities=20%  Similarity=0.247  Sum_probs=32.6

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR   53 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   53 (115)
                      ...+.++++.|.| .|.+|.++++.|++.|++|++++|+++.
T Consensus        14 ~~~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           14 NLYFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKA   54 (245)
T ss_dssp             -----CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             ccccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            3456788888887 5999999999999999999999998775

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.36  E-value=0.018  Score=39.17  Aligned_cols=38  Identities=16%  Similarity=0.038  Sum_probs=33.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKS   56 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~   56 (115)
                      .++.|+|+ |.+|..++..|+..|. +|++++++++.++.
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~   48 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEG   48 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHH
Confidence            47889998 9999999999999997 89999999876665

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.34  E-value=0.031  Score=39.75  Aligned_cols=75  Identities=17%  Similarity=0.340  Sum_probs=52.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      -+.++|.|| |-+|..+|+.| +..++|.++.++.++.+.+.+.+.           +...+..|-+ +++.+.+     
T Consensus       235 ~~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la~~l~-----------~~~Vi~GD~t-d~~~L~e-----  295 (461)
T 4g65_A          235 YRRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNLQRAEKLSEELE-----------NTIVFCGDAA-DQELLTE-----  295 (461)
T ss_dssp             CCEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCHHHHHHHHHHCT-----------TSEEEESCTT-CHHHHHH-----
T ss_pred             ccEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCHHHHHHHHHHCC-----------CceEEecccc-chhhHhh-----
Confidence            467888887 88999999987 456899999999999888888773           3557778885 5543322     


Q ss_pred             HHHcCCccEEEeCCc
Q 033624           97 WEAFGRVDALVNNAG  111 (115)
Q Consensus        97 ~~~~~~id~li~naG  111 (115)
                       +.....|++|...+
T Consensus       296 -e~i~~~D~~ia~T~  309 (461)
T 4g65_A          296 -ENIDQVDVFIALTN  309 (461)
T ss_dssp             -TTGGGCSEEEECCS
T ss_pred             -cCchhhcEEEEccc
Confidence             12234566665543

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=96.33  E-value=0.02  Score=38.68  Aligned_cols=40  Identities=23%  Similarity=0.314  Sum_probs=31.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHh-CCeEEEEecccchHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKS   56 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~   56 (115)
                      .|.+++|.|+ +++|...+..+... |++|+++++++++.+.
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~  203 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNL  203 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHH
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhh
Confidence            4889999987 78888777777755 7799999998876543

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=96.32  E-value=0.051  Score=38.88  Aligned_cols=41  Identities=20%  Similarity=0.245  Sum_probs=34.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE   60 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   60 (115)
                      ++.|.|+ |-+|..+|..|++.|++|++.+++++..+...+.
T Consensus         7 kVgVIGa-G~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~   47 (483)
T 3mog_A            7 TVAVIGS-GTMGAGIAEVAASHGHQVLLYDISAEALTRAIDG   47 (483)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Confidence            4666666 8999999999999999999999999887766543

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.32  E-value=0.019  Score=39.17  Aligned_cols=45  Identities=18%  Similarity=0.256  Sum_probs=34.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCC--e-----EEEEeccc--chHHHHHHHhh
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGC--R-----IVAAARRV--DRLKSLCDEIN   62 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~--~-----v~~~~r~~--~~~~~~~~~~~   62 (115)
                      .++.|||++|.+|..++..|+..+.  .     +++++.+.  +..+-....+.
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~   57 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQ   57 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHH
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhH
Confidence            4799999999999999999998775  4     88888864  23444444444

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=96.32  E-value=0.038  Score=36.05  Aligned_cols=83  Identities=12%  Similarity=0.010  Sum_probs=53.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCC-----CCCC------CCccceEEEEeecCC
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPG-----MVGS------PDSVRAVAVELDVCA   84 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-----~~~~------~~~~~~~~~~~di~~   84 (115)
                      .+.++|..|++.|   ..+..|+++|++|+.++.++..++.+.+......     ....      ....++.++.+|+. 
T Consensus        68 ~~~~vLD~GCG~G---~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~-  143 (252)
T 2gb4_A           68 SGLRVFFPLCGKA---IEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIF-  143 (252)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTT-
T ss_pred             CCCeEEEeCCCCc---HHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccc-
Confidence            4678999999877   3466788889999999999988877655442100     0000      01246788888885 


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEeCCc
Q 033624           85 DGATIEISVQKAWEAFGRVDALVNNAG  111 (115)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~id~li~naG  111 (115)
                      +..         ....+.+|+++.++.
T Consensus       144 ~l~---------~~~~~~FD~V~~~~~  161 (252)
T 2gb4_A          144 DLP---------RANIGKFDRIWDRGA  161 (252)
T ss_dssp             TGG---------GGCCCCEEEEEESSS
T ss_pred             cCC---------cccCCCEEEEEEhhh
Confidence            321         011257888887643

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=96.31  E-value=0.012  Score=41.53  Aligned_cols=40  Identities=20%  Similarity=0.248  Sum_probs=35.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRL   54 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   54 (115)
                      .+.|++++|.|. |.||+.+++.+...|++|+++++++...
T Consensus       217 ~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~dp~ra  256 (435)
T 3gvp_A          217 MFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEIDPICA  256 (435)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             eecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCChhhh
Confidence            568999999998 7899999999999999999999886543

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.28  E-value=0.011  Score=40.87  Aligned_cols=44  Identities=16%  Similarity=0.171  Sum_probs=38.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      .+.+++++|+|+ |.+|+.+++.+...|++|+++++++.+.+...
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~  212 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE  212 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            457899999996 89999999999999999999999988766543

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=96.26  E-value=0.014  Score=41.59  Aligned_cols=39  Identities=26%  Similarity=0.285  Sum_probs=34.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR   53 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   53 (115)
                      .+.|++++|.|. |.||+.+|+.+...|++|+++++++..
T Consensus       244 ~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~  282 (464)
T 3n58_A          244 MMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPIC  282 (464)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             cccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcch
Confidence            578999999997 789999999999999999999887644

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.26  E-value=0.0065  Score=40.22  Aligned_cols=40  Identities=18%  Similarity=0.230  Sum_probs=33.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      ++.|.| .|.+|..++..|++.|++|++++|+++..+.+.+
T Consensus         3 ~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~   42 (287)
T 3pdu_A            3 TYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVA   42 (287)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHH
T ss_pred             eEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH
Confidence            466666 5899999999999999999999999887666544

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.24  E-value=0.015  Score=38.98  Aligned_cols=42  Identities=26%  Similarity=0.272  Sum_probs=35.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      .+++.|.|. |.+|..+++.|++.|++|++++|+++..+.+.+
T Consensus         9 ~~~IgiIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~   50 (306)
T 3l6d_A            9 EFDVSVIGL-GAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVA   50 (306)
T ss_dssp             SCSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            456777775 899999999999999999999999887766544

>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*

Probab=96.24  E-value=0.013  Score=39.77  Aligned_cols=42  Identities=17%  Similarity=0.312  Sum_probs=34.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      -+++.|.|+ |-+|..+|..++..|+.|++.+.+++.++...+
T Consensus         6 ~~~VaViGa-G~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~   47 (319)
T 3ado_A            6 AGDVLIVGS-GLVGRSWAMLFASGGFRVKLYDIEPRQITGALE   47 (319)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHH
T ss_pred             CCeEEEECC-cHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence            346777887 889999999999999999999998876654433

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=96.24  E-value=0.084  Score=34.60  Aligned_cols=38  Identities=18%  Similarity=0.347  Sum_probs=32.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCC--eEEEEecccchHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSL   57 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~   57 (115)
                      ++.|.| .|.+|..++..|.+.|+  +|++++|+++..+.+
T Consensus         3 ~I~iIG-~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~   42 (281)
T 2g5c_A            3 NVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKA   42 (281)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH
T ss_pred             EEEEEe-cCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHH
Confidence            577888 59999999999999998  899999988766554

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.18  E-value=0.056  Score=37.08  Aligned_cols=38  Identities=18%  Similarity=0.208  Sum_probs=30.5

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCC-------eEEEEecccc
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGC-------RIVAAARRVD   52 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~-------~v~~~~r~~~   52 (115)
                      +..-++.|+|++|+||..++..|+....       .+.+++.++.
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~   66 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPA   66 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGG
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCc
Confidence            4456899999999999999999987543       5888887653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	115
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	9e-23
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	4e-22
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-21
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	7e-21
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	8e-21
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	4e-20
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	7e-20
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	8e-20
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	1e-19
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	3e-19
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	3e-19
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	6e-19
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	8e-19
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	1e-18
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	2e-18
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	2e-18
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-18
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	3e-18
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	4e-18
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	4e-18
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	6e-18
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	6e-18
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	9e-18
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	2e-17
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-17
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	3e-17
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	2e-16
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	2e-16
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	2e-16
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	4e-16
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	4e-16
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	6e-16
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	7e-16
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	1e-15
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	1e-15
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	1e-15
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	2e-15
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	2e-15
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	7e-15
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	2e-14
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-14
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	2e-14
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	4e-14
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	4e-14
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	5e-14
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	1e-13
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-13
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	1e-12
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-12
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-12
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	2e-11
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	8e-11
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-10
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-10
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	8e-10
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	9e-10
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	3e-09
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	5e-09
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	2e-08
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	8e-08
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	2e-07
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	4e-07
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	5e-07
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	3e-06
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	3e-06
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	5e-06
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	6e-06
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	4e-05
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	7e-05
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	3e-04
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	5e-04
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	6e-04
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	7e-04
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	0.002
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	0.004
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	0.004

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 86.6 bits (214), Expect = 9e-23
 Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 7/99 (7%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           DL  +V +VTG S GLG      LA+AGC +V A+R ++       ++ +         V
Sbjct: 2   DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY------GV 55

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             +A   DV ++   ++  ++   E FG++D +VN AGI
Sbjct: 56  ETMAFRCDV-SNYEEVKKLLEAVKEKFGKLDTVVNAAGI 93

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 85.0 bits (210), Expect = 4e-22
 Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 5/98 (5%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
             EKV ++TG+S+G+GR   +  A+ G ++    R  +RL+    +I   G         
Sbjct: 3   FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAG----VSEQN 58

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             +V  DV    A  +  +      FG++D LVNNAG 
Sbjct: 59  VNSVVADV-TTDAGQDEILSTTLGKFGKLDILVNNAGA 95

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.4 bits (206), Expect = 2e-21
 Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 6/98 (6%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
             +++ +VTGAS G+G      L + G ++V  AR V  ++ L  E    G  G      
Sbjct: 8   WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPG-----T 62

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            +    D+ ++   I             VD  +NNAG+
Sbjct: 63  LIPYRCDL-SNEEDILSMFSAIRSQHSGVDICINNAGL 99

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 82.0 bits (202), Expect = 7e-21
 Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 8/99 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L+ K  ++TGA +G+G+E  +  A AG  +V +    D    + DEI + G        
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG-------G 60

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +A A   D+      +      A    G+VD LVNNAG 
Sbjct: 61  QAFACRCDI-TSEQELSALADFAISKLGKVDILVNNAGG 98

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 82.0 bits (202), Expect = 8e-21
 Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 5/98 (5%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
            + K V++TG+S+G+GR   +  A+ G  +    R  +RL+     I K G        +
Sbjct: 3   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSG----VSEKQ 58

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             +V  DV       +  +    + FG++D LVNNAG 
Sbjct: 59  VNSVVADV-TTEDGQDQIINSTLKQFGKIDVLVNNAGA 95

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 80.1 bits (197), Expect = 4e-20
 Identities = 26/100 (26%), Positives = 37/100 (37%), Gaps = 9/100 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  K V+VTG + G+G     + A  G  I   AR    L     +  K G        
Sbjct: 5   SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG-------F 57

Query: 74  RAVAVELDVCADGATIEISVQKAWEAF-GRVDALVNNAGI 112
           +      D  +     E  +Q     F G++D L+NN G 
Sbjct: 58  QVTGSVCDA-SLRPEREKLMQTVSSMFGGKLDILINNLGA 96

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 79.3 bits (195), Expect = 7e-20
 Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 9/98 (9%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L+ KV ++TG + G+G        + G +++   R  D  +     +  P         +
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD--------Q 55

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               + D  +D            +AFG V  LVNNAGI
Sbjct: 56  IQFFQHDS-SDEDGWTKLFDATEKAFGPVSTLVNNAGI 92

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 79.0 bits (194), Expect = 8e-20
 Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
             ++VV++TG  SGLGR   + LA  G ++       + L++    + +           
Sbjct: 2   FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA-----PDAE 56

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
            +    DV +D A +E  V    E FGR+D   NNAG
Sbjct: 57  VLTTVADV-SDEAQVEAYVTATTERFGRIDGFFNNAG 92

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 78.9 bits (194), Expect = 1e-19
 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 5/96 (5%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
            + K V++TG+S+G+GR   +  AK G ++    R  DRL+    +I K G      + +
Sbjct: 2   FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAG----VPAEK 57

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
             AV  DV  + +  +  +      FG++D LVNNA
Sbjct: 58  INAVVADV-TEASGQDDIINTTLAKFGKIDILVNNA 92

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.2 bits (192), Expect = 3e-19
 Identities = 27/98 (27%), Positives = 54/98 (55%), Gaps = 3/98 (3%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  +V +VTG ++G+G+    +L + G  +V A+R+++RLKS  DE+     +      R
Sbjct: 10  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQA--NLPPTKQAR 67

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            + ++ ++  +   +   V+   + FG+++ LVNN G 
Sbjct: 68  VIPIQCNI-RNEEEVNNLVKSTLDTFGKINFLVNNGGG 104

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.3 bits (190), Expect = 3e-19
 Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 6/97 (6%)

Query: 16  NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRA 75
           N KV +VTGA+ G+GR F   L   G ++      ++        +++       +  + 
Sbjct: 2   NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF-----EPQKT 56

Query: 76  VAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           + ++ DV AD   +  + +K  + FGR+D LVNNAG+
Sbjct: 57  LFIQCDV-ADQQQLRDTFRKVVDHFGRLDILVNNAGV 92

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 76.5 bits (188), Expect = 6e-19
 Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 10/98 (10%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L +K+ ++TG ++G+GR      A  G  I  A             I   G        R
Sbjct: 3   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADL--VPAPEAEAAIRNLG-------RR 53

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
            + V+ DV +    +E   ++    FGR D LVNNAGI
Sbjct: 54  VLTVKCDV-SQPGDVEAFGKQVISTFGRCDILVNNAGI 90

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 76.6 bits (188), Expect = 8e-19
 Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 11/98 (11%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  KV +VTG +SG+G E    L   G ++  +       + L  E+ +          R
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGE----------R 53

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           ++ V  DV +  A   + +       G ++ LVNNAGI
Sbjct: 54  SMFVRHDV-SSEADWTLVMAAVQRRLGTLNVLVNNAGI 90

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 75.8 bits (186), Expect = 1e-18
 Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 6/99 (6%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           DL  K V+   A  G+G +   +L K   +      RV+   +L +             V
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINP------KV 55

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                  DV    A  +  ++K ++    VD L+N AGI
Sbjct: 56  NITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGI 94

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 75.5 bits (185), Expect = 2e-18
 Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 11/100 (11%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  KV +V+G + G+G      +   G ++V      +  K++  E+             
Sbjct: 4   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD----------A 53

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG 114
           A  V LDV    A  + +V  A  AFG +  LVNNAGI  
Sbjct: 54  ARYVHLDV-TQPAQWKAAVDTAVTAFGGLHVLVNNAGILN 92

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 75.5 bits (185), Expect = 2e-18
 Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 9/101 (8%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L +KV ++TG + G+G        + G ++V A    D  + +C+ I  P          
Sbjct: 4   LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD--------V 55

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
              V  DV      +   V       G++D +  N G+   
Sbjct: 56  ISFVHCDV-TKDEDVRNLVDTTIAKHGKLDIMFGNVGVLST 95

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 75.1 bits (184), Expect = 2e-18
 Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 13/97 (13%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L +K V++TGA+ G+GR      AK G R+VA       L+   + +             
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG------------ 50

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           A  V +DV AD A++E    +A    GR+D +V+ AG
Sbjct: 51  AHPVVMDV-ADPASVERGFAEALAHLGRLDGVVHYAG 86

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 74.6 bits (183), Expect = 3e-18
 Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 16/99 (16%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           + +    +VTGA  G+GR+    L  +G ++VA  R    L SL  E             
Sbjct: 2   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG---------- 51

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               V +D+         + +KA    G VD LVNNA +
Sbjct: 52  -IEPVCVDL-----GDWDATEKALGGIGPVDLLVNNAAL 84

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 74.5 bits (183), Expect = 4e-18
 Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 14/98 (14%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
              K V+VTG + G+GR      A+ G  +     R +  +               +++ 
Sbjct: 3   FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA-------------EAIG 49

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               ++D+  D       V++A  A GRVD LVNNA I
Sbjct: 50  GAFFQVDL-EDERERVRFVEEAAYALGRVDVLVNNAAI 86

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 74.7 bits (183), Expect = 4e-18
 Identities = 22/99 (22%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
               K ++VTG + G+G  F   +A AG  +    R       + +++ K         V
Sbjct: 6   SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF------GV 59

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +  A + DV ++   +  ++Q+     G +  L+ NAG+
Sbjct: 60  KTKAYQCDV-SNTDIVTKTIQQIDADLGPISGLIANAGV 97

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 74.0 bits (181), Expect = 6e-18
 Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 9/102 (8%)

Query: 12  WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVGSP 70
           + DL  KVV++TG+S+GLG+   +  A    ++V   R   D   S+ +EI K G     
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG----- 56

Query: 71  DSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
               A+AV+ DV    + +   VQ A + FG++D ++NNAG+
Sbjct: 57  --GEAIAVKGDV-TVESDVINLVQSAIKEFGKLDVMINNAGL 95

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 73.9 bits (181), Expect = 6e-18
 Identities = 33/98 (33%), Positives = 42/98 (42%), Gaps = 11/98 (11%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           DL+ K V++TG + GLG E       AG R+V A    +   +   E+            
Sbjct: 2   DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGD---------- 51

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
            A    LDV       +  V  A E FG VD LVNNAG
Sbjct: 52  AARYQHLDV-TIEEDWQRVVAYAREEFGSVDGLVNNAG 88

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 73.7 bits (180), Expect = 9e-18
 Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 8/94 (8%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           KV +VTGA  G+G+   L L K G  +  A       K++  EIN+ G         AVA
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG-------GHAVA 54

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           V++DV +D   +  +V++A +  G  D +VNNAG
Sbjct: 55  VKVDV-SDRDQVFAAVEQARKTLGGFDVIVNNAG 87

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.7 bits (178), Expect = 2e-17
 Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 8/97 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            +  ++V++TGA  G+GR    + AK   ++V        L+    +    G        
Sbjct: 4   SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG-------A 56

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
           +     +D  ++   I  S +K     G V  LVNNA
Sbjct: 57  KVHTFVVDC-SNREDIYSSAKKVKAEIGDVSILVNNA 92

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 72.3 bits (177), Expect = 2e-17
 Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 7/99 (7%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           +L     +VTG S G+G     +LA  G  +   +R    L     +    G        
Sbjct: 5   NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG-------F 57

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           +  A   D+ +     E+    A    G+++ LVNNAGI
Sbjct: 58  KVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGI 96

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 72.4 bits (177), Expect = 3e-17
 Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 8/94 (8%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           +V +VTGA+SG+G E    L K G R+   AR  + L++   E+ + G       V A  
Sbjct: 3   EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG-------VEADG 55

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
              DV      IE  V    E +G VD LVNNAG
Sbjct: 56  RTCDV-RSVPEIEALVAAVVERYGPVDVLVNNAG 88

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 70.5 bits (172), Expect = 2e-16
 Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 7/100 (7%)

Query: 11  PWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSP 70
           P +    KV  +TG  +GLG+     L+  G + V A+R++D LK+  ++I+        
Sbjct: 19  PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT----- 73

Query: 71  DSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
              +  A++ DV  D   ++ +V +  +  G  + ++NNA
Sbjct: 74  -GNKVHAIQCDV-RDPDMVQNTVSELIKVAGHPNIVINNA 111

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 70.1 bits (171), Expect = 2e-16
 Identities = 16/91 (17%), Positives = 28/91 (30%), Gaps = 14/91 (15%)

Query: 22  VTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELD 81
           VT      G    L L++AG  +        +   L             ++      +L 
Sbjct: 5   VTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL-------------EAFAETYPQLK 51

Query: 82  VCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                      ++    A+G+VD LV+N   
Sbjct: 52  P-MSEQEPAELIEAVTSAYGQVDVLVSNDIF 81

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.0 bits (171), Expect = 2e-16
 Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 16/98 (16%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  + V+VTGA  G+GR     L   G R+VA +R    L SL  E             
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG---------- 53

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
               V +D+         + ++A  + G VD LVNNA 
Sbjct: 54  -IEPVCVDL-----GDWEATERALGSVGPVDLLVNNAA 85

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 69.4 bits (169), Expect = 4e-16
 Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 11/97 (11%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L+ K ++VTGA+SG+GR      A+ G  +VA  R    L      +             
Sbjct: 3   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEA----------E 52

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
           A+AV  DV +D   +E    +A E FGR+  + + AG
Sbjct: 53  AIAVVADV-SDPKAVEAVFAEALEEFGRLHGVAHFAG 88

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 69.4 bits (169), Expect = 4e-16
 Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 9/98 (9%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L     +VTG S G+G     +LA  G R+   +R    L    +   + G       +
Sbjct: 3   SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG-------L 55

Query: 74  RAVAVELDVCADGATIEISVQKAWEAF-GRVDALVNNA 110
                  D+       +  +Q     F G+++ LVNNA
Sbjct: 56  NVEGSVCDL-LSRTERDKLMQTVAHVFDGKLNILVNNA 92

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 68.9 bits (168), Expect = 6e-16
 Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 11/99 (11%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            L  + V++TG +SGLGR         G ++    +  +RL  L  +             
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHG----------D 51

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             + +  DV       + +  +    FG++D L+ NAGI
Sbjct: 52  NVLGIVGDV-RSLEDQKQAASRCVARFGKIDTLIPNAGI 89

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.7 bits (167), Expect = 7e-16
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 9/96 (9%)

Query: 18  KVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
            V +VTG + G+G     DL +     +V  AR V R ++   ++   G       +   
Sbjct: 4   HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG-------LSPR 56

Query: 77  AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             +LD+  D  +I        + +G +D LVNNAGI
Sbjct: 57  FHQLDI-DDLQSIRALRDFLRKEYGGLDVLVNNAGI 91

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 67.8 bits (165), Expect = 1e-15
 Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 9/99 (9%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVGSPDSV 73
           L  KV + TGA  G+GR   ++L + G  +V          + +  E+ K G        
Sbjct: 4   LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG-------A 56

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           + VA++ D+ +  + +     KA   FG +D +++N+G+
Sbjct: 57  QGVAIQADI-SKPSEVVALFDKAVSHFGGLDFVMSNSGM 94

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 67.9 bits (165), Expect = 1e-15
 Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 8/101 (7%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
            N KV +VTGA   +G    L LA+ G  I       + L+     + + G       V 
Sbjct: 3   FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG-------VE 55

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
           A +   DV      +  +V      FG++D L NNAG +G 
Sbjct: 56  ARSYVCDV-TSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGA 95

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.7 bits (165), Expect = 1e-15
 Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 12/96 (12%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
              KVV+VTG   G+G         +G R+V   +     ++L  E+             
Sbjct: 4   YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG----------- 52

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
           AV +  DV      ++  V +    FGR+D +VNNA
Sbjct: 53  AVFILCDV-TQEDDVKTLVSETIRRFGRLDCVVNNA 87

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 67.7 bits (165), Expect = 2e-15
 Identities = 31/99 (31%), Positives = 42/99 (42%), Gaps = 2/99 (2%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
             + +VV+VTGA  GLGR + L  A+ G  +V      D             +V      
Sbjct: 4   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 63

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
              AV           E  V+ A + FGR+D +VNNAGI
Sbjct: 64  GGKAV--ANYDSVEAGEKLVKTALDTFGRIDVVVNNAGI 100

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 67.1 bits (163), Expect = 2e-15
 Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 11/95 (11%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L+ K  ++TG++ G+GR F     + G R+  A   ++  ++   EI             
Sbjct: 3   LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGP----------A 52

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNN 109
           A A+ LDV  D A+I+  V +  + +G +D LVNN
Sbjct: 53  ACAIALDV-TDQASIDRCVAELLDRWGSIDILVNN 86

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 65.9 bits (160), Expect = 7e-15
 Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 9/98 (9%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVGSPDSV 73
           L  KV +VTGA  G+GRE  ++L + GC+++       +  + +   I K G        
Sbjct: 16  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG-------S 68

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
            A  V+ +V      I    ++A + FG++D + +N+G
Sbjct: 69  DAACVKANV-GVVEDIVRMFEEAVKIFGKLDIVCSNSG 105

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 65.0 bits (158), Expect = 2e-14
 Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 8/90 (8%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
               KV +VTGA  G+GRE    LAK+   ++  +R      S+ DEI   G        
Sbjct: 7   CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG-------Y 59

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRV 103
            +     DV +    I   + K       V
Sbjct: 60  ESSGYAGDV-SKKEEISEVINKILTEHKNV 88

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 64.9 bits (157), Expect = 2e-14
 Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 10/98 (10%)

Query: 19  VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRL-KSLCDEINKPGMVGSPDSVRAVA 77
             ++TG +  +G    + L + G R+V   R  +   + L  E+N         +  AV 
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR------AGSAVL 56

Query: 78  VELDVCADGATIEIS---VQKAWEAFGRVDALVNNAGI 112
            + D+    + ++     +  ++ AFGR D LVNNA  
Sbjct: 57  CKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASA 94

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 64.4 bits (156), Expect = 2e-14
 Identities = 23/102 (22%), Positives = 39/102 (38%), Gaps = 11/102 (10%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAK---AGCRIVAAARRVDRLKSLCDEINKPGMVGSPD 71
           L   V ++TGAS G GR     LA+    G  ++ +AR    L+ L +E+          
Sbjct: 4   LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQ-----P 58

Query: 72  SVRAVAVELDVC---ADGATIEISVQKAWEAFGRVDALVNNA 110
            ++ V    D+         +    +       +   L+NNA
Sbjct: 59  DLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNA 100

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.0 bits (155), Expect = 4e-14
 Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 7/101 (6%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L  K V+VTGAS G+GRE    LAK G  +V  AR  + L+ +     + G         
Sbjct: 12  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA-------A 64

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIRGN 115
           +         D    E  V +A +  G +D L+ N     +
Sbjct: 65  SAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTS 105

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 63.7 bits (154), Expect = 4e-14
 Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 8/96 (8%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVGSPDSV 73
           L  KV +VTG++SG+G      LA  G  IV         ++ +   +           V
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH------GV 55

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNN 109
           + +    D+ + G  +   V  A    GR+D LVNN
Sbjct: 56  KVLYDGADL-SKGEAVRGLVDNAVRQMGRIDILVNN 90

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 63.7 bits (154), Expect = 5e-14
 Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 15/99 (15%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRA 75
             V+VTGA+ G+G      L K      I+A AR V++   L    +           R 
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDS----------RV 53

Query: 76  VAVELDVCADGATIEISVQKAWEAFGR--VDALVNNAGI 112
             + L V     +++  V K  E  G   +  L+NNAG+
Sbjct: 54  HVLPLTV-TCDKSLDTFVSKVGEIVGSDGLSLLINNAGV 91

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 62.1 bits (150), Expect = 1e-13
 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 15/99 (15%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCR-------IVAAARRVDRLKSLCDEINKPGMVGSP 70
            ++++TGA  G+GR   L+ A+A          +V ++R    L+ +  E    G     
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG----- 56

Query: 71  DSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNN 109
                  +  D+ +D A +        E +G +D LVNN
Sbjct: 57  --ALTDTITADI-SDMADVRRLTTHIVERYGHIDCLVNN 92

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 61.6 bits (149), Expect = 2e-13
 Identities = 24/96 (25%), Positives = 35/96 (36%), Gaps = 23/96 (23%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           + +K V+V  AS G+GR     L++ G  +   AR  + LK                   
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHR-------------- 47

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
              V  D+  D       +   +E    VD LV NA
Sbjct: 48  --YVVCDLRKD-------LDLLFEKVKEVDILVLNA 74

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 59.9 bits (144), Expect = 1e-12
 Identities = 16/95 (16%), Positives = 30/95 (31%), Gaps = 24/95 (25%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
            +++++G ++G+G      L  AG +IV                            R   
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDI------------------------RDAE 37

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
           V  D+       +       +    +D LV  AG+
Sbjct: 38  VIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGL 72

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 59.8 bits (144), Expect = 1e-12
 Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 11/97 (11%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
           +   K+ +VTGAS G+GR     LA  G +++  A   +  +++ D +   G        
Sbjct: 1   NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGK------- 53

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
               + L+V    +   +  +   E FG VD LVNNA
Sbjct: 54  ---GLMLNVTDPASIESVLEKIRAE-FGEVDILVNNA 86

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 57.8 bits (139), Expect = 5e-12
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 9/88 (10%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDSVRAV 76
            VV+VTGAS G+G+   L L KAGC+++   AR     + +  +I   G        +A+
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYG-------GQAI 54

Query: 77  AVELDVCADGATIEISVQKAWEAFGRVD 104
               DV    A +E  ++ A +A+G +D
Sbjct: 55  TFGGDVS-KEADVEAMMKTAIDAWGTID 81

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 56.3 bits (135), Expect = 2e-11
 Identities = 23/96 (23%), Positives = 35/96 (36%), Gaps = 19/96 (19%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
              + V+VTG + G+G      LA  G ++    R     K                   
Sbjct: 5   FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK------------------G 46

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
              VE+DV  D   ++ +     E  G V+ LV+NA
Sbjct: 47  LFGVEVDV-TDSDAVDRAFTAVEEHQGPVEVLVSNA 81

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.7 bits (131), Expect = 8e-11
 Identities = 20/98 (20%), Positives = 38/98 (38%), Gaps = 17/98 (17%)

Query: 15  LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVR 74
           L+ KV+++T A+ G+G+   L  A+ G +++A      +L+ L                 
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPG------------ 51

Query: 75  AVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                +       T +  + +      R+D L N AG 
Sbjct: 52  -----IQTRVLDVTKKKQIDQFANEVERLDVLFNVAGF 84

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 54.3 bits (129), Expect = 2e-10
 Identities = 24/106 (22%), Positives = 32/106 (30%), Gaps = 13/106 (12%)

Query: 19  VVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPG-----------M 66
           V +VTGA+  LGR     L   G  +     R      +L   +N               
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

Query: 67  VGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
             +   V        V          V   +  +GR D LVNNA  
Sbjct: 64  NVATAPVSGADGSAPV-TLFTRCAELVAACYTHWGRCDVLVNNASS 108

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.9 bits (126), Expect = 3e-10
 Identities = 12/93 (12%), Positives = 23/93 (24%), Gaps = 16/93 (17%)

Query: 18  KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           + V+V G    LG             + +     +   S    +         +    V 
Sbjct: 3   RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS--ASVIVKMTDSFTEQADQVT 60

Query: 78  VELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
            E+                     +VDA++  A
Sbjct: 61  AEVG--------------KLLGDQKVDAILCVA 79

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.2 bits (124), Expect = 8e-10
 Identities = 10/49 (20%), Positives = 18/49 (36%)

Query: 18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGM 66
           V ++TG +SGLG      L   G   V         ++   ++    +
Sbjct: 6  LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCV 54

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 51.8 bits (123), Expect = 9e-10
 Identities = 11/90 (12%), Positives = 22/90 (24%), Gaps = 16/90 (17%)

Query: 20  VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVE 79
           V+V G    LG        K G  ++      +        I   G     +  +++   
Sbjct: 5   VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD--SNILVDGNKNWTEQEQSIL-- 60

Query: 80  LDVCADGATIEISVQKAWEAFGRVDALVNN 109
                           +     +VD +   
Sbjct: 61  ------------EQTASSLQGSQVDGVFCV 78

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 50.2 bits (119), Expect = 3e-09
 Identities = 18/99 (18%), Positives = 30/99 (30%), Gaps = 11/99 (11%)

Query: 14  DLNEKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPD 71
           DL+ K  +V G ++   LG      L +AG  +  + +               G      
Sbjct: 5   DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFR 64

Query: 72  SVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
                            ++       EAFG +D LV+  
Sbjct: 65  ---------ADVTQDEELDALFAGVKEAFGGLDYLVHAI 94

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 49.7 bits (117), Expect = 5e-09
 Identities = 11/53 (20%), Positives = 21/53 (39%), Gaps = 3/53 (5%)

Query: 18 KVVMVTGASSGLGREFC---LDLAKAGCRIVAAARRVDRLKSLCDEINKPGMV 67
            +++TG + GLG       L+L +    +    R  ++ K L D       +
Sbjct: 3  NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNI 55

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 47.9 bits (113), Expect = 2e-08
 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 4/59 (6%)

Query: 17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRA 75
          E+  +VTG +SGLGR   L L   G R+V    R +      D I   G V   + VR 
Sbjct: 1  ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE----DLIYVEGDVTREEDVRR 55

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 8e-08
 Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 1/66 (1%)

Query: 18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
           VV++TG SSG+G    + LA    +       +  LK+          +  P       
Sbjct: 3  TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPG-SLET 61

Query: 78 VELDVC 83
          ++LDV 
Sbjct: 62 LQLDVR 67

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 45.1 bits (105), Expect = 2e-07
 Identities = 10/55 (18%), Positives = 21/55 (38%), Gaps = 3/55 (5%)

Query: 15 LNEKVVMVTGA--SSGLGREFCLDLAKAGCRIVAAARRVDRL-KSLCDEINKPGM 66
          L+ K ++V+G    S +         + G ++V       RL + + D +     
Sbjct: 4  LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAP 58

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 44.5 bits (104), Expect = 4e-07
 Identities = 17/98 (17%), Positives = 38/98 (38%), Gaps = 11/98 (11%)

Query: 15  LNEKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDS 72
           L+ K ++VTG +S   +       + + G  +    +  D+LK   +E            
Sbjct: 3   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQL------- 54

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNA 110
             +  V     A+ A+I+    +  + + + D  V++ 
Sbjct: 55  -GSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSI 91

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 44.2 bits (103), Expect = 5e-07
 Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR----VDRLKSLCDEINKPGM 66
             V+VTG + G+G +    LA+ G   +    R     D    L  E+   G 
Sbjct: 9  TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGA 62

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 42.0 bits (97), Expect = 3e-06
 Identities = 10/99 (10%), Positives = 26/99 (26%), Gaps = 11/99 (11%)

Query: 15  LNEKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDS 72
           L  K  ++ G ++   +           G  +       + L+     I +         
Sbjct: 3   LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLN-ESLEKRVRPIAQELNS----- 56

Query: 73  VRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAG 111
                V     +     +       +  G +D +V++  
Sbjct: 57  ---PYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVA 92

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 42.0 bits (97), Expect = 3e-06
 Identities = 11/42 (26%), Positives = 14/42 (33%), Gaps = 2/42 (4%)

Query: 14 DLNEKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVDR 53
          DL  K   + G +   G G      LA AG  I+        
Sbjct: 5  DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPAL 46

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 41.0 bits (95), Expect = 5e-06
 Identities = 17/99 (17%), Positives = 29/99 (29%), Gaps = 16/99 (16%)

Query: 14  DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSV 73
            +  K  +V   +  +G      LA  G  +V   R++D+ ++  D +NK   V      
Sbjct: 20  SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKV------ 73

Query: 74  RAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGI 112
                        A          EA      +     I
Sbjct: 74  ----------NVTAAETADDASRAEAVKGAHFVFTAGAI 102

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 41.2 bits (95), Expect = 6e-06
 Identities = 13/46 (28%), Positives = 22/46 (47%)

Query: 20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPG 65
          V + G +  LG+   L LA  G  IV  +RR ++ ++   E  +  
Sbjct: 3  VALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIA 48

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 39.0 bits (89), Expect = 4e-05
 Identities = 11/47 (23%), Positives = 21/47 (44%)

Query: 18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKP 64
           +V+VTGA+  +       L + G ++   AR   +L +L    +  
Sbjct: 12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAK 58

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 38.3 bits (87), Expect = 7e-05
 Identities = 9/49 (18%), Positives = 19/49 (38%), Gaps = 2/49 (4%)

Query: 16 NEKVVMVTGA--SSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEIN 62
          NE +  + G   ++G G     +L+K   +I+           + +  N
Sbjct: 1  NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKN 49

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 36.2 bits (82), Expect = 3e-04
 Identities = 9/41 (21%), Positives = 15/41 (36%)

Query: 16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS 56
           +K + V GA+   G       A  G  + A    +  L +
Sbjct: 2  QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA 42

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (81), Expect = 5e-04
 Identities = 10/41 (24%), Positives = 15/41 (36%)

Query: 18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC 58
          K + + GA+   G        +AG  +    R   RL S  
Sbjct: 4  KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG 44

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 35.5 bits (80), Expect = 6e-04
 Identities = 10/66 (15%), Positives = 21/66 (31%), Gaps = 4/66 (6%)

Query: 18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVA 77
            +++ GA+  +GR         G         + R  +      K  ++ S  +  A  
Sbjct: 4  SRILLIGATGYIGRHVAKASLDLGHPTFL----LVRESTASSNSEKAQLLESFKASGANI 59

Query: 78 VELDVC 83
          V   + 
Sbjct: 60 VHGSID 65

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 35.2 bits (79), Expect = 7e-04
 Identities = 11/50 (22%), Positives = 16/50 (32%)

Query: 15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKP 64
             K V VTG +   G    L L   G  +   +     + SL +     
Sbjct: 6  WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVA 55

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 34.4 bits (77), Expect = 0.002
 Identities = 11/49 (22%), Positives = 17/49 (34%), Gaps = 2/49 (4%)

Query: 16 NEKVVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEIN 62
          N   V+VTGAS   G+     L +           R     + +  E +
Sbjct: 2  NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEAD 50

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 33.4 bits (75), Expect = 0.004
 Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 7/56 (12%)

Query: 16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVA-------AARRVDRLKSLCDEINKP 64
            KV ++TG +  +G      L K   ++V          R +D ++SL  E    
Sbjct: 15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWS 70

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.1 bits (74), Expect = 0.004
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 4/37 (10%)

Query: 18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRL 54
          K+V+VTG +  +G    ++L + G   V      D L
Sbjct: 2  KIVLVTGGAGYIGSHTVVELIENGYDCVV----ADNL 34

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	115
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.91
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.91
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.91
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.9
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.9
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.9
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.9
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.9
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.9
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.9
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.9
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.9
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.9
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.9
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.89
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.89
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.89
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.89
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.89
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.89
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.89
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.89
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.89
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.89
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.89
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.89
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.89
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.88
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.88
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.88
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.88
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.88
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.87
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.87
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.87
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.87
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.86
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.86
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.85
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.84
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.84
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.84
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.84
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.84
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.82
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.81
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.81
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.81
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.8
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.77
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.75
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.75
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.74
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.74
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.74
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.71
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.71
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.7
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.69
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.68
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.67
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.64
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.57
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.56
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.53
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.43
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.37
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.35
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.33
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.31
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.3
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.29
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.29
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.28
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.27
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.15
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.12
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.09
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.08
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.05
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.03
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.02
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.0
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	98.93
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	98.92
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	98.89
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.84
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	98.8
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	98.8
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	98.77
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.75
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.74
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	98.74
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	98.66
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.65
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	98.4
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	98.32
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.31
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	98.29
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	98.28
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.26
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.26
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	98.24
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.2
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	98.15
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.15
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	98.14
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.12
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	98.11
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	98.03
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.01
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	98.0
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	97.98
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.93
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.91
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.76
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.75
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.74
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.73
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.72
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.71
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.69
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.67
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.67
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.66
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.66
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.65
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.62
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.61
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.57
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.48
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.47
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.46
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.45
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	97.44
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	97.38
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.35
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.31
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	97.29
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.27
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.27
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	97.24
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	97.09
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	97.07
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.07
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	97.06
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.05
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	97.04
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.04
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.0
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.91
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.9
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.81
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.79
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	96.75
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	96.69
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.64
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.6
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	96.53
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	96.48
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.46
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.45
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.44
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	96.4
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.38
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.36
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.35
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.3
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.3
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	96.21
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.21
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.2
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	96.19
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	96.17
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.17
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	96.16
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.14
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	96.14
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.14
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	96.13
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	96.11
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.09
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	96.09
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	96.09
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	96.09
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.07
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	96.05
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	96.05
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	96.04
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	96.01
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.99
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	95.97
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.95
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	95.92
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	95.91
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	95.86
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	95.85
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	95.85
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	95.8
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.77
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.76
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	95.74
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	95.74
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	95.72
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	95.7
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.69
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	95.69
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	95.66
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.53
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	95.53
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	95.5
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.49
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.48
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.44
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	95.42
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	95.33
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	95.3
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	95.26
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.26
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	95.24
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	95.2
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	95.16
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	95.16
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	95.13
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	95.13
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	95.02
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	94.98
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	94.93
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	94.92
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	94.88
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	94.87
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	94.84
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	94.78
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	94.65
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	94.64
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	94.61
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.58
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	94.47
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	94.42
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	94.41
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	94.28
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	94.28
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	94.23
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	94.07
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	93.98
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	93.93
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	93.93
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	93.82
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	93.78
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	93.77
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	93.74
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	93.73
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	93.64
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	93.57
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	93.56
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	93.51
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	93.5
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.47
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	93.45
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	93.37
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	93.35
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	93.33
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	93.28
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	93.22
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	93.15
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	93.13
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	93.12
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	93.1
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	93.09
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	93.02
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	92.84
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	92.84
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	92.78
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	92.4
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	92.27
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	92.27
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	92.18
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	92.17
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	92.04
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	91.98
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	91.9
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	91.87
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	91.83
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	91.79
d1c4oa2	174	Nucleotide excision repair enzyme UvrB {Thermus th	91.51
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	91.49
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	91.41
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	91.33
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	91.27
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	91.25
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	91.21
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	91.18
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	91.13
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	90.94
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	90.92
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	90.91
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	90.78
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	90.77
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	90.67
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	90.52
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	90.48
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	90.31
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	90.23
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	90.21
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	90.21
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	90.02
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	89.88
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	89.81
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	89.79
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	89.63
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	89.5
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	89.41
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	89.36
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	89.32
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	89.32
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	89.31
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	89.27
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	89.11
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	89.04
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	89.01
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	88.98
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	88.98
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	88.97
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	88.93
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	88.93
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	88.63
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	88.47
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	88.45
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	88.32
d1onfa1	259	Glutathione reductase {Plasmodium falciparum [TaxI	88.22
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	88.2
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	87.96
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	87.77
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	87.73
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	87.71
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	87.46
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	87.44
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	87.43
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	87.34
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	87.15
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	87.15
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	86.77
d2afhe1	289	Nitrogenase iron protein {Azotobacter vinelandii [	86.77
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	86.77
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	86.49
d1pvva2	163	Ornithine transcarbamoylase {Archaeon Pyrococcus f	86.09
d1mo9a1	261	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	86.02
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	85.77
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	85.64
d2ax3a2	211	Hypothetical protein TM0922, N-terminal domain {Th	85.61
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	85.59
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	85.5
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	85.4
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	85.4
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	85.14
d1ko7a2	169	HPr kinase HprK C-terminal domain {Staphylococcus	85.02
d1kdga1	360	Flavoprotein domain of flavocytochrome cellobiose	84.9
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	84.82
d2gjca1	311	Thiazole biosynthetic enzyme Thi4 {Baker's yeast (	84.73
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	84.69
d1lqta1	216	Ferredoxin:NADP reductase FprA {Mycobacterium tube	84.67
d1neka2	330	Succinate dehydogenase {Escherichia coli [TaxId: 5	84.47
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	84.39
d1cjca1	225	Adrenodoxin reductase of mitochondrial p450 system	84.25
d1jzta_	243	Hypothetical protein YNL200c (YNU0_YEAST) {Baker's	83.77
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	83.66
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	83.59
d1m1na_	477	Nitrogenase iron-molybdenum protein, alpha chain {	83.42
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	83.35
d1t5la2	181	Nucleotide excision repair enzyme UvrB {Bacillus c	83.33
d2h00a1	250	Methyltransferase 10 domain containing protein MET	82.93
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	82.93
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	82.84
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	82.1
d1knxa2	177	HPr kinase HprK C-terminal domain {Mycoplasma pneu	82.04
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	81.94
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	81.82
d1ps9a2	162	2,4-dienoyl-CoA reductase, C-terminal domain {Esch	81.72
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	81.69
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	81.21
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	81.13
d2cula1	230	GidA-related protein TTHA1897 {Thermus thermophilu	80.87
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	80.8
d1kkma_	176	HPr kinase HprK C-terminal domain {Lactobacillus c	80.75
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	80.72
d1dbwa_	123	Transcriptional regulatory protein FixJ, receiver	80.68
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	80.62
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	80.4
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	80.26
d1mvoa_	121	PhoP receiver domain {Bacillus subtilis [TaxId: 14	80.22
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	80.14
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	80.02

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=9.7e-24  Score=138.31  Aligned_cols=97  Identities=25%  Similarity=0.391  Sum_probs=88.2

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      |..+++|++||||+++|||+++|+.|+++|++|++++|+.++++++.++++..+     .+.++.++.||++ ++++++.
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~-----~~~~~~~~~~Dls-~~~~v~~   78 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG-----YPGTLIPYRCDLS-NEEDILS   78 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-----CSSEEEEEECCTT-CHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-----CCceEEEEEccCC-CHHHHHH
Confidence            456889999999999999999999999999999999999999999999998654     2357899999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++++.+++++||+||||||...
T Consensus        79 ~v~~~~~~~g~iD~lVnnAg~~~  101 (257)
T d1xg5a_          79 MFSAIRSQHSGVDICINNAGLAR  101 (257)
T ss_dssp             HHHHHHHHHCCCSEEEECCCCCC
T ss_pred             HHHHHHHhcCCCCEEEecccccC
Confidence            99999999999999999999853

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.91  E-value=1e-23  Score=138.18  Aligned_cols=91  Identities=40%  Similarity=0.552  Sum_probs=84.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      +||++||||+++|||+++|+.|+++|++|++++|+.+.+++..++++..+       .++.++.+|++ ++++++.++++
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g-------~~~~~~~~Dvs-~~~~v~~~~~~   72 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG-------VEADGRTCDVR-SVPEIEALVAA   72 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTT-CHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------CcEEEEEeecC-CHHHHHHHHHH
Confidence            48999999999999999999999999999999999999999999998654       57899999996 89999999999


Q ss_pred             HHHHcCCccEEEeCCccCC
Q 033624           96 AWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~~  114 (115)
                      +.+++++||+||||||+..
T Consensus        73 ~~~~~g~iDilVnnAG~~~   91 (257)
T d2rhca1          73 VVERYGPVDVLVNNAGRPG   91 (257)
T ss_dssp             HHHHTCSCSEEEECCCCCC
T ss_pred             HHHHhCCCCEEEecccccC
Confidence            9999999999999999864

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.91  E-value=7e-24  Score=138.59  Aligned_cols=95  Identities=33%  Similarity=0.545  Sum_probs=85.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ++++||+++|||+++|||+++|+.|+++|++|++++|+.+++++..+++....      +.++..+.+|++ ++++++.+
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~------g~~~~~~~~Dv~-~~~~v~~~   73 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY------GVETMAFRCDVS-NYEEVKKL   73 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH------CCCEEEEECCTT-CHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh------CCcEEEEEccCC-CHHHHHHH
Confidence            46889999999999999999999999999999999999998888877775432      257889999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+++++||+||||||+..
T Consensus        74 ~~~~~~~~g~iDiLVnnAG~~~   95 (251)
T d1vl8a_          74 LEAVKEKFGKLDTVVNAAGINR   95 (251)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCCCC
Confidence            9999999999999999999854

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.90  E-value=1.8e-23  Score=136.58  Aligned_cols=95  Identities=34%  Similarity=0.421  Sum_probs=88.1

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ++.+++|+++|||+++|||+++|+.|+++|++|++++|+.+.+++..++++..+       .++..+.+|++ ++++++.
T Consensus         5 ~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g-------~~~~~~~~Dvt-~~~~v~~   76 (251)
T d2c07a1           5 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG-------YESSGYAGDVS-KKEEISE   76 (251)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTT-------CCEEEEECCTT-CHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC-------CcEEEEEccCC-CHHHHHH
Confidence            467899999999999999999999999999999999999999999999998754       57889999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++++.+++++||+||||||+..
T Consensus        77 ~~~~~~~~~g~iDilvnnag~~~   99 (251)
T d2c07a1          77 VINKILTEHKNVDILVNNAGITR   99 (251)
T ss_dssp             HHHHHHHHCSCCCEEEECCCCCC
T ss_pred             HHHHHHHhcCCceeeeecccccc
Confidence            99999999999999999999864

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.90  E-value=1.3e-23  Score=137.76  Aligned_cols=95  Identities=32%  Similarity=0.525  Sum_probs=85.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .|+||+++|||+++|||+++|+.|+++|++|++++|+.+.+++..+++....     .+.++..+.+|++ ++++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~-----~~~~~~~~~~Dvt-~~~~v~~~~   74 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA-----PDAEVLTTVADVS-DEAQVEAYV   74 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHC-----TTCCEEEEECCTT-SHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC-----CCCeEEEEeccCC-CHHHHHHHH
Confidence            3689999999999999999999999999999999999999888888776532     2357889999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+++++||+||||||+.+
T Consensus        75 ~~~~~~~G~iDiLVnnAG~~~   95 (258)
T d1iy8a_          75 TATTERFGRIDGFFNNAGIEG   95 (258)
T ss_dssp             HHHHHHHSCCSEEEECCCCCC
T ss_pred             HHHHHHhCCCCEEEECCcccc
Confidence            999999999999999999764

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=1.1e-23  Score=137.83  Aligned_cols=93  Identities=33%  Similarity=0.529  Sum_probs=86.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .++||+++|||+++|||+++|+.|+++|++|++++|+.+.+++..++++..+       .++.++.+|++ ++++++.++
T Consensus         8 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g-------~~~~~~~~Dvs-~~~~~~~~~   79 (255)
T d1fmca_           8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG-------GQAFACRCDIT-SEQELSALA   79 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTT-CHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcC-------CcEEEEEccCC-CHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999998754       57889999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+++++||+||||||+..
T Consensus        80 ~~~~~~~g~iDilvnnAG~~~  100 (255)
T d1fmca_          80 DFAISKLGKVDILVNNAGGGG  100 (255)
T ss_dssp             HHHHHHHSSCCEEEECCCCCC
T ss_pred             HHHHHHcCCCCEeeeCCcCCC
Confidence            999999999999999999864

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.90  E-value=2.8e-23  Score=136.29  Aligned_cols=93  Identities=31%  Similarity=0.442  Sum_probs=86.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .|+||+++|||+++|||+++|+.|+++|++|++++|+.+.+++..++++..+       .++..+.+|++ ++++++.++
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g-------~~~~~~~~Dv~-~~~~v~~~~   73 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG-------VEARSYVCDVT-SEEAVIGTV   73 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-------SCEEEEECCTT-CHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------CcEEEEEccCC-CHHHHHHHH
Confidence            4789999999999999999999999999999999999999999999998754       57889999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+++++||+||||||+.+
T Consensus        74 ~~~~~~~g~iDilVnnaG~~~   94 (260)
T d1zema1          74 DSVVRDFGKIDFLFNNAGYQG   94 (260)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHhCCCCeehhhhcccc
Confidence            999999999999999999753

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.90  E-value=2.2e-23  Score=136.20  Aligned_cols=93  Identities=26%  Similarity=0.400  Sum_probs=85.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      +.|+||+++|||+++|||+++|+.|+++|++|++++|+.+.+++..+++...        .++.++.+|++ ++++++.+
T Consensus         2 nrL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~Dv~-~~~~v~~~   72 (251)
T d1zk4a1           2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP--------DQIQFFQHDSS-DEDGWTKL   72 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT--------TTEEEEECCTT-CHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCC--------CcEEEEEccCC-CHHHHHHH
Confidence            4588999999999999999999999999999999999999999888888542        46889999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+++++||+||||||+..
T Consensus        73 ~~~~~~~~G~iDiLVnnAg~~~   94 (251)
T d1zk4a1          73 FDATEKAFGPVSTLVNNAGIAV   94 (251)
T ss_dssp             HHHHHHHHSSCCEEEECCCCCC
T ss_pred             HHHHHHHhCCceEEEecccccc
Confidence            9999999999999999999864

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.90  E-value=2.8e-23  Score=137.02  Aligned_cols=96  Identities=29%  Similarity=0.464  Sum_probs=87.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .|+||+++|||+++|||+++|+.|+++|++|++++|+.+.+++..+++++.+    ....++..+.+|++ ++++++.++
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~----~~~~~~~~~~~Dvs-~~~~v~~~~   76 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSG----VSEKQVNSVVADVT-TEDGQDQII   76 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT----CCGGGEEEEECCTT-SHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC----CCCCceEEEEccCC-CHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999998653    12357899999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+++++||+||||||+..
T Consensus        77 ~~~~~~~g~iDilvnnAG~~~   97 (272)
T d1xkqa_          77 NSTLKQFGKIDVLVNNAGAAI   97 (272)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHhCCceEEEeCCcccC
Confidence            999999999999999999863

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.2e-23  Score=134.91  Aligned_cols=94  Identities=26%  Similarity=0.363  Sum_probs=87.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .++.||+++|||+++|||+++|++|+++|++|++++|+.+++++..++++..+       .++..+.||++ ++++++.+
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~-------~~~~~~~~Dvs-~~~~v~~~   74 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG-------AKVHTFVVDCS-NREDIYSS   74 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTT-CHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------CcEEEEEeeCC-CHHHHHHH
Confidence            46889999999999999999999999999999999999999999999988654       57889999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+.++++|+||||||+..
T Consensus        75 ~~~i~~~~g~idilinnag~~~   96 (244)
T d1yb1a_          75 AKKVKAEIGDVSILVNNAGVVY   96 (244)
T ss_dssp             HHHHHHHTCCCSEEEECCCCCC
T ss_pred             HHHHHHHcCCCceeEeeccccc
Confidence            9999999999999999999864

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.90  E-value=4.7e-23  Score=135.67  Aligned_cols=93  Identities=24%  Similarity=0.425  Sum_probs=85.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..|+||+++|||+++|||+++|++|+++|++|++++|+.+.+++..+++...        ..+.++.+|++ ++++++.+
T Consensus         2 nrL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~--------~~~~~~~~Dv~-~~~~v~~~   72 (268)
T d2bgka1           2 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP--------DVISFVHCDVT-KDEDVRNL   72 (268)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT--------TTEEEEECCTT-CHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC--------CceEEEEccCC-CHHHHHHH
Confidence            3688999999999999999999999999999999999999999999988653        35778899996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.++++++|+||||||+..
T Consensus        73 ~~~~~~~~g~iD~lVnnAG~~~   94 (268)
T d2bgka1          73 VDTTIAKHGKLDIMFGNVGVLS   94 (268)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHcCCcceecccccccc
Confidence            9999999999999999999754

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.90  E-value=4.3e-23  Score=135.03  Aligned_cols=91  Identities=37%  Similarity=0.438  Sum_probs=82.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ++|+||+++|||+++|||+++|++|+++|++|++++|+.+++++..+++.          .++.++.+|++ ++++++.+
T Consensus         1 ndL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dv~-~~~~v~~~   69 (254)
T d1hdca_           1 NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG----------DAARYQHLDVT-IEEDWQRV   69 (254)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTG----------GGEEEEECCTT-CHHHHHHH
T ss_pred             CCCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC----------CceEEEEcccC-CHHHHHHH
Confidence            36899999999999999999999999999999999999988777666552          57889999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+++++||+||||||+..
T Consensus        70 ~~~~~~~~g~iDilVnnAg~~~   91 (254)
T d1hdca_          70 VAYAREEFGSVDGLVNNAGIST   91 (254)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHcCCccEEEecCcccc
Confidence            9999999999999999999864

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.90  E-value=5.8e-23  Score=134.71  Aligned_cols=94  Identities=24%  Similarity=0.345  Sum_probs=86.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ++|+||+++|||+++|||+++|+.|+++|++|++++|+.+++++..++++..+       .++.++.+|++ ++++++.+
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g-------~~~~~~~~Dv~-~~~~v~~~   75 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG-------FKVEASVCDLS-SRSERQEL   75 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CEEEEEECCTT-CHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------CCceEEEeeCC-CHHHHHHH
Confidence            57899999999999999999999999999999999999999999999987654       57888999996 89999999


Q ss_pred             HHHHHHHcC-CccEEEeCCccCC
Q 033624           93 VQKAWEAFG-RVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~-~id~li~naG~~~  114 (115)
                      ++++.++++ ++|+||||||+..
T Consensus        76 ~~~~~~~~~~~idilvnnAG~~~   98 (259)
T d2ae2a_          76 MNTVANHFHGKLNILVNNAGIVI   98 (259)
T ss_dssp             HHHHHHHTTTCCCEEEECCCCCC
T ss_pred             HHHHHHHhCCCceEEEECCceec
Confidence            999999887 7999999999854

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.90  E-value=3.6e-23  Score=135.85  Aligned_cols=94  Identities=36%  Similarity=0.579  Sum_probs=84.5

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc-hHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-RLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .+|+||+++|||+++|||+++|++|+++|++|++++|+.+ .+++..++++..+       .++..+.+|++ ++++++.
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g-------~~~~~~~~Dvt-~~~~v~~   74 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG-------GEAIAVKGDVT-VESDVIN   74 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------CEEEEEECCTT-SHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcC-------CcEEEEEccCC-CHHHHHH
Confidence            4689999999999999999999999999999999999864 5677788887654       57889999996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++++.+++++||+||||||+..
T Consensus        75 ~~~~~~~~~G~iDiLVnnAG~~~   97 (261)
T d1geea_          75 LVQSAIKEFGKLDVMINNAGLEN   97 (261)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHhCCCCEeeccceecC
Confidence            99999999999999999999864

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=9.6e-23  Score=133.28  Aligned_cols=93  Identities=29%  Similarity=0.482  Sum_probs=85.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      +||+++|||+++|||+++|+.|+++|++|++++|+.+.+++..+++....     .+.++.++.+|++ ++++++.++++
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~~Dv~-~~~~v~~~~~~   75 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF-----EPQKTLFIQCDVA-DQQQLRDTFRK   75 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTS-----CGGGEEEEECCTT-SHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhc-----CCCcEEEEEeecC-CHHHHHHHHHH
Confidence            69999999999999999999999999999999999999999888887543     2457899999996 89999999999


Q ss_pred             HHHHcCCccEEEeCCccCC
Q 033624           96 AWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~~  114 (115)
                      +.+++++||+||||||+..
T Consensus        76 ~~~~~G~iDilVnnAg~~~   94 (254)
T d2gdza1          76 VVDHFGRLDILVNNAGVNN   94 (254)
T ss_dssp             HHHHHSCCCEEEECCCCCC
T ss_pred             HHHHcCCcCeecccccccc
Confidence            9999999999999999864

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.89  E-value=6.9e-23  Score=134.04  Aligned_cols=89  Identities=38%  Similarity=0.580  Sum_probs=82.7

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      |+++|||+++|||+++|+.|+++|++|++++|+++.+++..+++++.+       .++..+.+|++ ++++++.+++++.
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g-------~~~~~~~~Dv~-~~~~v~~~~~~~~   73 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG-------GHAVAVKVDVS-DRDQVFAAVEQAR   73 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTT-SHHHHHHHHHHHH
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------CcEEEEEeeCC-CHHHHHHHHHHHH
Confidence            678999999999999999999999999999999999999999998654       57889999996 8999999999999


Q ss_pred             HHcCCccEEEeCCccCC
Q 033624           98 EAFGRVDALVNNAGIRG  114 (115)
Q Consensus        98 ~~~~~id~li~naG~~~  114 (115)
                      +++++||+||||||+..
T Consensus        74 ~~~g~iDilVnnAG~~~   90 (255)
T d1gega_          74 KTLGGFDVIVNNAGVAP   90 (255)
T ss_dssp             HHTTCCCEEEECCCCCC
T ss_pred             HHhCCccEEEecccccc
Confidence            99999999999999864

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.89  E-value=3e-23  Score=136.08  Aligned_cols=95  Identities=23%  Similarity=0.389  Sum_probs=84.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .+++||++||||+++|||+++|+.|+++|++|++++|+.+.+.+..+++.+..      +.++..+.+|++ ++++++.+
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~------g~~~~~~~~Dv~-~~~~v~~~   77 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF------GVKTKAYQCDVS-NTDIVTKT   77 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH------TCCEEEEECCTT-CHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh------CCceEEEEccCC-CHHHHHHH
Confidence            36789999999999999999999999999999999999998888777775432      257889999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+++++||+||||||+..
T Consensus        78 ~~~~~~~~g~iDilVnnAg~~~   99 (260)
T d1h5qa_          78 IQQIDADLGPISGLIANAGVSV   99 (260)
T ss_dssp             HHHHHHHSCSEEEEEECCCCCC
T ss_pred             HHHHHHHhCCCcEecccccccc
Confidence            9999999999999999999854

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.89  E-value=6.5e-23  Score=134.73  Aligned_cols=95  Identities=31%  Similarity=0.493  Sum_probs=84.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .|+||+++|||+++|||+++|++|+++|++|++++|+.+.+++..++++..+    ....++..+.+|++ ++++++.++
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~----~~~~~~~~~~~Dvt-~~~~v~~~~   76 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAG----VSEQNVNSVVADVT-TDAGQDEIL   76 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----CCGGGEEEEECCTT-SHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC----CCcCceEEEEccCC-CHHHHHHHH
Confidence            4789999999999999999999999999999999999999999999887653    12346899999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+++++||+||||||+.
T Consensus        77 ~~~~~~~g~iDilvnnAG~~   96 (264)
T d1spxa_          77 STTLGKFGKLDILVNNAGAA   96 (264)
T ss_dssp             HHHHHHHSCCCEEEECCC--
T ss_pred             HHHHHHhCCCCEeecccccc
Confidence            99999999999999999974

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=1.2e-22  Score=132.11  Aligned_cols=90  Identities=36%  Similarity=0.578  Sum_probs=82.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      +++||+++|||+++|||+++|+.|+++|++|++++|+++.++++.+++.          .+...+.+|++ ++++++.++
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~----------~~~~~~~~Dv~-~~~~v~~~~   69 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG----------ANGKGLMLNVT-DPASIESVL   69 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG----------GGEEEEECCTT-CHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----------CCCcEEEEEec-CHHHhhhhh
Confidence            4789999999999999999999999999999999999999988888774          45778999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+++++||+||||||+..
T Consensus        70 ~~~~~~~g~iDilVnnAg~~~   90 (243)
T d1q7ba_          70 EKIRAEFGEVDILVNNAGITR   90 (243)
T ss_dssp             HHHHHHTCSCSEEEECCCCCC
T ss_pred             hhhhcccCCcceehhhhhhcc
Confidence            999999999999999999864

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.89  E-value=1.4e-22  Score=131.86  Aligned_cols=91  Identities=32%  Similarity=0.433  Sum_probs=83.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..|+||+++|||+++|||+++|+.|+++|++|++++|+++++++..+++.          .++.++++|++ ++++++.+
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dv~-~~~~v~~~   70 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA----------DAARYVHLDVT-QPAQWKAA   70 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG----------GGEEEEECCTT-CHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----------CcceEEEeecC-CHHHHHHH
Confidence            46889999999999999999999999999999999999998888887764          46788999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.++++++|+||||||+..
T Consensus        71 ~~~~~~~~g~idilinnAG~~~   92 (244)
T d1nffa_          71 VDTAVTAFGGLHVLVNNAGILN   92 (244)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHhCCCeEEEECCcccC
Confidence            9999999999999999999864

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.89  E-value=3.5e-23  Score=135.77  Aligned_cols=94  Identities=31%  Similarity=0.427  Sum_probs=82.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc-chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      +|+||+++|||+++|||+++|++|+++|++|++++|+. +.+++..+++....      +.++.++.+|++ ++++++.+
T Consensus         1 ~L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~------g~~~~~~~~Dv~-~~~~v~~~   73 (260)
T d1x1ta1           1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH------GVKVLYDGADLS-KGEAVRGL   73 (260)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH------TSCEEEECCCTT-SHHHHHHH
T ss_pred             CCCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhc------CCcEEEEECCCC-CHHHHHHH
Confidence            36899999999999999999999999999999999974 55667776665432      257889999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+++++||+||||||+..
T Consensus        74 ~~~~~~~~G~iDiLVnnAG~~~   95 (260)
T d1x1ta1          74 VDNAVRQMGRIDILVNNAGIQH   95 (260)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCC
T ss_pred             HHHHHHHhCCCcEEEeeccccc
Confidence            9999999999999999999864

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.89  E-value=1e-22  Score=133.31  Aligned_cols=90  Identities=32%  Similarity=0.553  Sum_probs=82.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .|+||+++|||+++|||+++|+.|+++|++|++++|+.+.+++..+++.          .++.++.+|++ ++++++.++
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~----------~~~~~~~~Dvt-~~~~v~~~~   70 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIG----------PAACAIALDVT-DQASIDRCV   70 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHC----------TTEEEEECCTT-CHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC----------CceEEEEeeCC-CHHHHHHHH
Confidence            4789999999999999999999999999999999999998888888773          46788999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+++++||+||||||+..
T Consensus        71 ~~~~~~~g~iDilVnnAg~~~   91 (256)
T d1k2wa_          71 AELLDRWGSIDILVNNAALFD   91 (256)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHhCCccEEEeeccccc
Confidence            999999999999999999864

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.89  E-value=9.8e-23  Score=133.62  Aligned_cols=95  Identities=27%  Similarity=0.359  Sum_probs=85.6

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .++|+||+++|||+++|||+++|+.|+++|++|++++|+.+++++..+++...+       .++..+.+|++ ++++++.
T Consensus         3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~-------~~~~~~~~Dv~-~~~~v~~   74 (259)
T d1xq1a_           3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG-------FQVTGSVCDAS-LRPEREK   74 (259)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTT-SHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------CceEEEeccCC-CHHHHHH
Confidence            467899999999999999999999999999999999999999999998887654       57899999996 8999999


Q ss_pred             HHHHHHHHc-CCccEEEeCCccCC
Q 033624           92 SVQKAWEAF-GRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~-~~id~li~naG~~~  114 (115)
                      +++++.+++ +++|+||||||+..
T Consensus        75 ~~~~~~~~~~g~idilvnnAG~~~   98 (259)
T d1xq1a_          75 LMQTVSSMFGGKLDILINNLGAIR   98 (259)
T ss_dssp             HHHHHHHHHTTCCSEEEEECCC--
T ss_pred             HHHHHHHHhCCCcccccccccccC
Confidence            999999998 68999999999864

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.6e-22  Score=132.04  Aligned_cols=89  Identities=30%  Similarity=0.457  Sum_probs=81.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .++||+++|||+++|||+++|+.|+++|++|++++|+.+.++++.+++           ....++.+|++ ++++++.++
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~-----------~~~~~~~~Dvs-~~~~v~~~~   70 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL-----------PGAVFILCDVT-QEDDVKTLV   70 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----------TTEEEEECCTT-SHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----------CCCeEEEccCC-CHHHHHHHH
Confidence            578999999999999999999999999999999999998888777765           24678999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+++++||+||||||+..
T Consensus        71 ~~~~~~~g~iDilVnnAG~~~   91 (250)
T d1ydea1          71 SETIRRFGRLDCVVNNAGHHP   91 (250)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHhcCCCCEEEecccccc
Confidence            999999999999999999753

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.89  E-value=1.4e-22  Score=133.83  Aligned_cols=95  Identities=33%  Similarity=0.512  Sum_probs=85.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .|+||+++|||+++|||+++|+.|++.|++|++++|+.+.+++..+++.+.+    ....++..+.+|++ ++++++.++
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~----~~~~~~~~~~~Dv~-~~~~v~~~~   75 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAG----VPAEKINAVVADVT-EASGQDDII   75 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----CCGGGEEEEECCTT-SHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcceEEEEeeCC-CHHHHHHHH
Confidence            3689999999999999999999999999999999999999999998887653    12346899999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      +++.+++++||+||||||+.
T Consensus        76 ~~~~~~~G~iDilVnnAG~~   95 (274)
T d1xhla_          76 NTTLAKFGKIDILVNNAGAN   95 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHcCCceEEEeecccc
Confidence            99999999999999999974

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.89  E-value=1.3e-22  Score=131.91  Aligned_cols=88  Identities=35%  Similarity=0.536  Sum_probs=79.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .|+||+++|||+++|||+++|+.|+++|++|++++|+.+.+++..+.+            ...++.+|++ +++++++++
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~------------~~~~~~~Dv~-~~~~v~~~~   68 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV------------GAHPVVMDVA-DPASVERGF   68 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT------------TCEEEECCTT-CHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc------------CCeEEEEecC-CHHHHHHHH
Confidence            478999999999999999999999999999999999988877766543            3567899996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+++++||+||||||+..
T Consensus        69 ~~~~~~~g~iDilVnnAG~~~   89 (242)
T d1ulsa_          69 AEALAHLGRLDGVVHYAGITR   89 (242)
T ss_dssp             HHHHHHHSSCCEEEECCCCCC
T ss_pred             HHHHHhcCCceEEEECCcccc
Confidence            999999999999999999864

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=9.6e-23  Score=134.48  Aligned_cols=90  Identities=30%  Similarity=0.415  Sum_probs=82.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHh-CCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .++++|||+++|||+++|+.|+++ |++|++++|+.+++++..++++..+       .++.++.||++ +.++++.++++
T Consensus         3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dvs-~~~sv~~~~~~   74 (275)
T d1wmaa1           3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG-------LSPRFHQLDID-DLQSIRALRDF   74 (275)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT-------CCCEEEECCTT-CHHHHHHHHHH
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC-------CcEEEEEEecC-CHHHHHHHHHH
Confidence            357799999999999999999986 8999999999999999999998754       56789999995 89999999999


Q ss_pred             HHHHcCCccEEEeCCccCC
Q 033624           96 AWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~~  114 (115)
                      +.+++++||+||||||+..
T Consensus        75 ~~~~~g~iDiLVnNAGi~~   93 (275)
T d1wmaa1          75 LRKEYGGLDVLVNNAGIAF   93 (275)
T ss_dssp             HHHHHSSEEEEEECCCCCC
T ss_pred             HHHhcCCcEEEEEcCCcCC
Confidence            9999999999999999864

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.7e-22  Score=133.77  Aligned_cols=99  Identities=27%  Similarity=0.498  Sum_probs=87.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..|+||+++|||+++|||+++|+.|+++|++|++++|+.+.+++..++++....  ...+.++..+.+|++ ++++++.+
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~--~~~~~~~~~~~~Dvs-~~~~v~~~   84 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLP--PTKQARVIPIQCNIR-NEEEVNNL   84 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSC--TTCCCCEEEEECCTT-CHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhc--cccCceEEEEeccCC-CHHHHHHH
Confidence            568999999999999999999999999999999999999999988888875321  112357899999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+.+++||+||||||+..
T Consensus        85 ~~~~~~~~G~iDiLVnnAg~~~  106 (297)
T d1yxma1          85 VKSTLDTFGKINFLVNNGGGQF  106 (297)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHhCCeEEEEeeccccc
Confidence            9999999999999999999754

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.88  E-value=2.6e-22  Score=133.33  Aligned_cols=99  Identities=26%  Similarity=0.401  Sum_probs=87.3

Q ss_pred             cCCCCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHH
Q 033624            9 LEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGAT   88 (115)
Q Consensus         9 ~~~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~   88 (115)
                      +.|.++++||+++|||+++|||+++|++|+++|++|++++|+.+++++..+++....      +.++..+.+|++ ++++
T Consensus        17 ~~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~------g~~~~~~~~D~~-~~~~   89 (294)
T d1w6ua_          17 MLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT------GNKVHAIQCDVR-DPDM   89 (294)
T ss_dssp             CSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH------SSCEEEEECCTT-CHHH
T ss_pred             CCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhc------CCceEEEEeccc-ChHH
Confidence            334468999999999999999999999999999999999999998888887776432      356889999996 8999


Q ss_pred             HHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           89 IEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        89 ~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++.+++.+...++++|+||||||...
T Consensus        90 v~~~~~~~~~~~g~iDilvnnAg~~~  115 (294)
T d1w6ua_          90 VQNTVSELIKVAGHPNIVINNAAGNF  115 (294)
T ss_dssp             HHHHHHHHHHHTCSCSEEEECCCCCC
T ss_pred             HHHHhhhhhhhccccchhhhhhhhcc
Confidence            99999999999999999999999754

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.88  E-value=4.9e-22  Score=129.47  Aligned_cols=91  Identities=32%  Similarity=0.450  Sum_probs=78.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .|+||+++|||+++|||+++|+.|++.|++|++++|+..+.  ....++..+       .++..+.+|++ ++++++.++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~--~~~~~~~~g-------~~~~~~~~Dvs-~~~~v~~~~   71 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE--AEAAIRNLG-------RRVLTVKCDVS-QPGDVEAFG   71 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHH--HHHHHHHTT-------CCEEEEECCTT-CHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH--HHHHHHHcC-------CcEEEEEeeCC-CHHHHHHHH
Confidence            47899999999999999999999999999999999987542  223344332       57889999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+++++||+||||||+..
T Consensus        72 ~~~~~~~G~iDilVnnAG~~~   92 (247)
T d2ew8a1          72 KQVISTFGRCDILVNNAGIYP   92 (247)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCCC
Confidence            999999999999999999864

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.88  E-value=4.4e-22  Score=130.09  Aligned_cols=91  Identities=30%  Similarity=0.386  Sum_probs=83.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..|+||+++|||+++|||+++|+.|+++|++|++++|+.+.+++..+++.          .+..++.+|++ ++++++.+
T Consensus         2 nrL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~----------~~~~~~~~Dv~-~~~~~~~~   70 (253)
T d1hxha_           2 NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG----------ERSMFVRHDVS-SEADWTLV   70 (253)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC----------TTEEEECCCTT-CHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC----------CCeEEEEeecC-CHHHHHHH
Confidence            35889999999999999999999999999999999999999888888773          35778999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.++++++|+||||||+..
T Consensus        71 ~~~~~~~~g~iDilVnnAG~~~   92 (253)
T d1hxha_          71 MAAVQRRLGTLNVLVNNAGILL   92 (253)
T ss_dssp             HHHHHHHHCSCCEEEECCCCCC
T ss_pred             HHHHHHHhCCCCeEEecccccC
Confidence            9999999999999999999864

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.88  E-value=8.5e-22  Score=129.04  Aligned_cols=94  Identities=26%  Similarity=0.383  Sum_probs=86.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ++|+||+++|||+++|||+++|+.|+++|++|++++|+++.+++..++++..+       ..+.++.+|++ +++.++.+
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~-------~~~~~~~~D~s-~~~~~~~~   73 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG-------LNVEGSVCDLL-SRTERDKL   73 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTT-CHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------CCceEEEeecC-CHHHHHHH
Confidence            57899999999999999999999999999999999999999999998888654       56888999995 89999999


Q ss_pred             HHHHHHHc-CCccEEEeCCccCC
Q 033624           93 VQKAWEAF-GRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~-~~id~li~naG~~~  114 (115)
                      ++++.+.+ +++|+||||||+..
T Consensus        74 ~~~~~~~~~g~idilinnag~~~   96 (258)
T d1ae1a_          74 MQTVAHVFDGKLNILVNNAGVVI   96 (258)
T ss_dssp             HHHHHHHTTSCCCEEEECCCCCC
T ss_pred             HHHHHHHhCCCcEEEeccccccc
Confidence            99999998 58999999999865

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.87  E-value=1.2e-21  Score=129.44  Aligned_cols=90  Identities=26%  Similarity=0.446  Sum_probs=82.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      +|+||+++|||+++|||+++|+.|+++|++|++++|+.+++++..+++.          .++..+.+|++ ++++++.++
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~----------~~~~~~~~Dv~-~~~~~~~~~   70 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHG----------DNVLGIVGDVR-SLEDQKQAA   70 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----------GGEEEEECCTT-CHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC----------CCeeEEecccc-cHHHHHHHH
Confidence            4789999999999999999999999999999999999988887777652          57889999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.++++++|+||||||+..
T Consensus        71 ~~~~~~~g~idilvnnAG~~~   91 (276)
T d1bdba_          71 SRCVARFGKIDTLIPNAGIWD   91 (276)
T ss_dssp             HHHHHHHSCCCEEECCCCCCC
T ss_pred             HHHHHHhCCcccccccccccC
Confidence            999999999999999999753

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.87  E-value=2.2e-21  Score=126.83  Aligned_cols=95  Identities=25%  Similarity=0.306  Sum_probs=80.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      +++||+++|||+++|||+++|++|+++|++|++++|+.+..+...+.....      ...++.++.+|++.+.++++.++
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~   75 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAIN------PKVNITFHTYDVTVPVAESKKLL   75 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHC------TTSEEEEEECCTTSCHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhC------CCCCEEEEEeecCCCHHHHHHHH
Confidence            578999999999999999999999999999999988877765554433322      13578899999975677899999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +.+.+++++||+||||||+..
T Consensus        76 ~~~~~~~g~iDilvnnAG~~~   96 (254)
T d1sbya1          76 KKIFDQLKTVDILINGAGILD   96 (254)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHcCCCCEEEeCCCCCC
Confidence            999999999999999999764

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.87  E-value=1.3e-21  Score=127.10  Aligned_cols=90  Identities=33%  Similarity=0.482  Sum_probs=80.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .|+||+++|||+++|||+++|+.|+++|++|++++|+.+.+.+..+++   +       .++.++++|++ ++++++.++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-------~~~~~~~~Dls-~~~~i~~~~   70 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---E-------AEAIAVVADVS-DPKAVEAVF   70 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---C-------SSEEEEECCTT-SHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---C-------CceEEEEecCC-CHHHHHHHH
Confidence            478999999999999999999999999999999999988776555543   2       46888999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+.++++|+||||||...
T Consensus        71 ~~i~~~~g~iDiLinnAg~~~   91 (241)
T d2a4ka1          71 AEALEEFGRLHGVAHFAGVAH   91 (241)
T ss_dssp             HHHHHHHSCCCEEEEGGGGTT
T ss_pred             HHHHHHhCCccEecccccccc
Confidence            999999999999999999753

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.87  E-value=1.9e-21  Score=126.77  Aligned_cols=87  Identities=31%  Similarity=0.415  Sum_probs=76.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .|+||+++|||+++|||+++|+.|+++|++|++++|+.+..+ ..+.+            ...++++|++ +++++++++
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~------------~~~~~~~Dv~-~~~~v~~~~   67 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI------------GGAFFQVDLE-DERERVRFV   67 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH------------TCEEEECCTT-CHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc------------CCeEEEEeCC-CHHHHHHHH
Confidence            478999999999999999999999999999999999976543 34433            2346889996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+++++||+||||||+..
T Consensus        68 ~~~~~~~G~iDiLVnnAG~~~   88 (248)
T d2d1ya1          68 EEAAYALGRVDVLVNNAAIAA   88 (248)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHhcCCCCeEEEeCcCCC
Confidence            999999999999999999864

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.86  E-value=2e-21  Score=126.03  Aligned_cols=89  Identities=29%  Similarity=0.521  Sum_probs=81.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCe-------EEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCR-------IVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~-------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      ++++|||+++|||+++|++|+++|++       |++++|+.+.+++..++++..+       .++.++.+|++ ++++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g-------~~~~~~~~Dvt-~~~~v~   73 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG-------ALTDTITADIS-DMADVR   73 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT-------CEEEEEECCTT-SHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEEecCC-CHHHHH
Confidence            46899999999999999999999998       8999999999999999998764       57889999996 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccCC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++++.++++++|+||||||+..
T Consensus        74 ~~~~~~~~~~g~iDilvnnAg~~~   97 (240)
T d2bd0a1          74 RLTTHIVERYGHIDCLVNNAGVGR   97 (240)
T ss_dssp             HHHHHHHHHTSCCSEEEECCCCCC
T ss_pred             HHHHHHHHHcCCcceeeccccccc
Confidence            999999999999999999999864

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.86  E-value=1.9e-21  Score=127.33  Aligned_cols=93  Identities=27%  Similarity=0.486  Sum_probs=82.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEec-ccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR-RVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .|.||++||||+++|||+++|+.|++.|++|++.++ +.+..++..++++..+       .++..+.+|++ ++++++.+
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g-------~~~~~~~~D~~-~~~~v~~~   74 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG-------AQGVAIQADIS-KPSEVVAL   74 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------CCEEEEECCTT-SHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcC-------CCceEecCCCC-CHHHHHHH
Confidence            478999999999999999999999999999998754 5555778888887654       57889999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++++.+++++||+||||||+..
T Consensus        75 ~~~~~~~~g~idilinnag~~~   96 (259)
T d1ja9a_          75 FDKAVSHFGGLDFVMSNSGMEV   96 (259)
T ss_dssp             HHHHHHHHSCEEEEECCCCCCC
T ss_pred             HHHHHHHcCCCcEEEecccccc
Confidence            9999999999999999999864

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.85  E-value=6.3e-21  Score=123.96  Aligned_cols=89  Identities=37%  Similarity=0.618  Sum_probs=79.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEe-cccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAA-RRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      ++++|||+++|||+++|++|+++|++|++.+ |+.+.+++..++++..+       .++.++.+|++ ++++++.+++++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g-------~~~~~~~~Dv~-~~~~v~~~~~~~   73 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYG-------GQAITFGGDVS-KEADVEAMMKTA   73 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHT-------CEEEEEECCTT-SHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcC-------CcEEEEeCCCC-CHHHHHHHHHHH
Confidence            4899999999999999999999999998875 56677788888887543       57889999996 899999999999


Q ss_pred             HHHcCCccEEEeCCccCC
Q 033624           97 WEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        97 ~~~~~~id~li~naG~~~  114 (115)
                      .+++++||+||||||+..
T Consensus        74 ~~~~g~iDiLVnnAg~~~   91 (244)
T d1edoa_          74 IDAWGTIDVVVNNAGITR   91 (244)
T ss_dssp             HHHSSCCSEEEECCCCCC
T ss_pred             HHHcCCCCcccccccccc
Confidence            999999999999999864

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.84  E-value=1.2e-20  Score=124.23  Aligned_cols=94  Identities=29%  Similarity=0.532  Sum_probs=83.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc-chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV-DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      ..|+||+++|||+++|||+++|+.|+++|++|++++++. +.+++..+++++.+       .++..+.+|++ ++++++.
T Consensus        14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g-------~~~~~~~~D~~-~~~~v~~   85 (272)
T d1g0oa_          14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG-------SDAACVKANVG-VVEDIVR   85 (272)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------CCEEEEECCTT-CHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhC-------CceeeEeCCCC-CHHHHHH
Confidence            458999999999999999999999999999999998774 55677777777654       57889999996 9999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++++.+.+++||++|||+|...
T Consensus        86 ~~~~~~~~~g~idilV~nag~~~  108 (272)
T d1g0oa_          86 MFEEAVKIFGKLDIVCSNSGVVS  108 (272)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHhCCCCccccccccch
Confidence            99999999999999999999753

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.84  E-value=1.1e-20  Score=122.72  Aligned_cols=85  Identities=33%  Similarity=0.422  Sum_probs=73.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      +++||+++|||+++|||+++|++|+++|++|++++|+.++++++.+++.           .+..+.+|++ +++.++++ 
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~-----------~~~~~~~Dv~-~~~~v~~~-   68 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-----------GIEPVCVDLG-DWDATEKA-   68 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-----------TCEEEECCTT-CHHHHHHH-
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC-----------CCeEEEEeCC-CHHHHHHH-
Confidence            5789999999999999999999999999999999999988887777653           3567889996 78776655 


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                         .+++++||+||||||+..
T Consensus        69 ---~~~~g~iDilVnnAg~~~   86 (242)
T d1cyda_          69 ---LGGIGPVDLLVNNAALVI   86 (242)
T ss_dssp             ---HTTCCCCSEEEECCCCCC
T ss_pred             ---HHHcCCCeEEEECCcccc
Confidence               456899999999999854

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.84  E-value=1.7e-20  Score=122.49  Aligned_cols=92  Identities=22%  Similarity=0.248  Sum_probs=78.0

Q ss_pred             CCCCCcEEEEecCCC--hHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           13 HDLNEKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      .+|+||+++|||+++  |||+++|++|++.|++|++++|+....+...+.....        .+...+.+|++ ++++++
T Consensus         4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~--------~~~~~~~~D~~-~~~~v~   74 (256)
T d1ulua_           4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEAL--------GGALLFRADVT-QDEELD   74 (256)
T ss_dssp             ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT--------TCCEEEECCTT-CHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhcc--------CcccccccccC-CHHHHH
Confidence            368899999999876  9999999999999999999999876555544433322        35678999996 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .+++++.+++++||+||||||+.
T Consensus        75 ~~~~~~~~~~g~iDilVnnag~~   97 (256)
T d1ulua_          75 ALFAGVKEAFGGLDYLVHAIAFA   97 (256)
T ss_dssp             HHHHHHHHHHSSEEEEEECCCCC
T ss_pred             HHHHHHHHhcCCceEEEeccccc
Confidence            99999999999999999999975

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.84  E-value=7.7e-21  Score=123.11  Aligned_cols=82  Identities=28%  Similarity=0.431  Sum_probs=73.9

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .++||+++|||+++|||+++|+.|+++|++|++++|+.+..                  ..+..+++|++ ++++++.++
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------------------~~~~~~~~Dv~-~~~~v~~~~   64 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP------------------KGLFGVEVDVT-DSDAVDRAF   64 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC------------------TTSEEEECCTT-CHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh------------------cCceEEEEecC-CHHHHHHHH
Confidence            47899999999999999999999999999999999986432                  24678999996 899999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +++.+++++||+||||||+..
T Consensus        65 ~~~~~~~g~iDiLVnnAG~~~   85 (237)
T d1uzma1          65 TAVEEHQGPVEVLVSNAGLSA   85 (237)
T ss_dssp             HHHHHHHSSCSEEEEECSCCC
T ss_pred             HHHHHhcCCceEEEeeecccc
Confidence            999999999999999999864

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=2.3e-20  Score=121.30  Aligned_cols=85  Identities=36%  Similarity=0.445  Sum_probs=73.4

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .|+||+++|||+++|||+++|+.|+++|++|++++|+.+.++++.+++.           .+..+.+|++ +++++++++
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~-----------~~~~~~~Dv~-d~~~v~~~~   71 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-----------GIEPVCVDLG-DWEATERAL   71 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-----------TCEEEECCTT-CHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC-----------CCeEEEEeCC-CHHHHHHHH
Confidence            4789999999999999999999999999999999999998888777653           3567889996 787776554


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                          +++++||+||||||+..
T Consensus        72 ----~~~g~iDilVnnAg~~~   88 (244)
T d1pr9a_          72 ----GSVGPVDLLVNNAAVAL   88 (244)
T ss_dssp             ----TTCCCCCEEEECCCCCC
T ss_pred             ----HHhCCceEEEecccccc
Confidence                56899999999999854

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.82  E-value=6.4e-20  Score=119.91  Aligned_cols=95  Identities=27%  Similarity=0.356  Sum_probs=82.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHH---hCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAK---AGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~---~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      .|.||+++|||+++|||+++|++|++   .|++|++++|+.+.++++.+++...+     .+.++..+.||++ ++++++
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~-----~~~~~~~~~~Dvs-~~~~v~   76 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQ-----PDLKVVLAAADLG-TEAGVQ   76 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHC-----TTSEEEEEECCTT-SHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhc-----CCceEEEEEccCC-CHHHHH
Confidence            57899999999999999999999986   79999999999999999999887543     2357899999996 899999


Q ss_pred             HHHHHHHHH----cCCccEEEeCCccCC
Q 033624           91 ISVQKAWEA----FGRVDALVNNAGIRG  114 (115)
Q Consensus        91 ~~~~~~~~~----~~~id~li~naG~~~  114 (115)
                      ++++.+.+.    ++.+|++|||||+.+
T Consensus        77 ~l~~~~~~~~~~~~~~~~~lvnnag~~~  104 (259)
T d1oaaa_          77 RLLSAVRELPRPEGLQRLLLINNAATLG  104 (259)
T ss_dssp             HHHHHHHHSCCCTTCCEEEEEECCCCCC
T ss_pred             HHHHHHHHhhhhccCceEEEEecccccc
Confidence            999887653    457899999999754

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.81  E-value=4.8e-20  Score=119.97  Aligned_cols=88  Identities=31%  Similarity=0.396  Sum_probs=74.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC--eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ..|++||||+++|||+++|++|+++|+  +|++.+|+.++++++.+    ..      ..++.++.+|++ ++++++.++
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~----~~------~~~~~~~~~Dvs-~~~~v~~~~   70 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----IK------DSRVHVLPLTVT-CDKSLDTFV   70 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----CC------CTTEEEEECCTT-CHHHHHHHH
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH----hh------CCceEEEEEecC-CHHHHHHHH
Confidence            458999999999999999999999996  68888999887765432    11      256889999996 899999999


Q ss_pred             HHHHHHcC--CccEEEeCCccCC
Q 033624           94 QKAWEAFG--RVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~--~id~li~naG~~~  114 (115)
                      +++.+.++  +||+||||||+.+
T Consensus        71 ~~i~~~~~~~~idilinnAG~~~   93 (250)
T d1yo6a1          71 SKVGEIVGSDGLSLLINNAGVLL   93 (250)
T ss_dssp             HHHHHHHGGGCCCEEEECCCCCC
T ss_pred             HHHHHHhCCCCeEEEEEcCcccC
Confidence            99988766  4999999999864

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.81  E-value=8.9e-20  Score=121.73  Aligned_cols=90  Identities=32%  Similarity=0.477  Sum_probs=75.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc---------chHHHHHHHhhCCCCCCCCCccceEEEEeecCC
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV---------DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCA   84 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~   84 (115)
                      +++||+++|||+++|||+++|+.|+++|++|++.+++.         +.+++..+++...          ...+.+|++ 
T Consensus         4 ~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~d~~-   72 (302)
T d1gz6a_           4 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR----------GGKAVANYD-   72 (302)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT----------TCEEEEECC-
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhc----------ccccccccc-
Confidence            57899999999999999999999999999999987653         3456666666532          345678885 


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           85 DGATIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +.++++.+++++.+++++||+||||||+..
T Consensus        73 ~~~~~~~~v~~~~~~~G~iDiLVnNAGi~~  102 (302)
T d1gz6a_          73 SVEAGEKLVKTALDTFGRIDVVVNNAGILR  102 (302)
T ss_dssp             CGGGHHHHHHHHHHHTSCCCEEEECCCCCC
T ss_pred             hHHHHHHHHHHHHHHcCCCCEEEECCccCC
Confidence            788899999999999999999999999865

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.8e-19  Score=118.35  Aligned_cols=93  Identities=32%  Similarity=0.388  Sum_probs=83.2

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      |+||+++|||+++|||+++|+.|+++|++|++++|+.+.+++..+++....      ...+..+.+|+. +...+...++
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~------~~~~~~~~~d~~-~~~~~~~~~~   84 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG------AASAHYIAGTME-DMTFAEQFVA   84 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT------CSEEEEEECCTT-CHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhh------cccchhhhhhhh-hHHHHHHHHH
Confidence            789999999999999999999999999999999999999998887765432      356788889994 8999999999


Q ss_pred             HHHHHcCCccEEEeCCccCC
Q 033624           95 KAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~~  114 (115)
                      .+...++.+|+++||||...
T Consensus        85 ~~~~~~g~~~~li~nag~~~  104 (269)
T d1xu9a_          85 QAGKLMGGLDMLILNHITNT  104 (269)
T ss_dssp             HHHHHHTSCSEEEECCCCCC
T ss_pred             HHHHHhCCcccccccccccc
Confidence            99999999999999999754

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.80  E-value=1.2e-19  Score=117.89  Aligned_cols=89  Identities=21%  Similarity=0.262  Sum_probs=75.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHH---HhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLA---KAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~---~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .|++||||+++|||+++|+.|+   ++|++|++++|+.+.++++.+..+..        .++.++.+|++ ++++++.++
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~Dvs-~~~~v~~~~   72 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNH--------SNIHILEIDLR-NFDAYDKLV   72 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHC--------TTEEEEECCTT-CGGGHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcC--------CcEEEEEEEec-cHHHHHHHH
Confidence            4789999999999999999997   47999999999998887765544432        47889999996 899999999


Q ss_pred             HHHHH--HcCCccEEEeCCccCC
Q 033624           94 QKAWE--AFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~--~~~~id~li~naG~~~  114 (115)
                      +++.+  .+++||+||||||+..
T Consensus        73 ~~i~~~~~~~~iDiLvnNAg~~~   95 (248)
T d1snya_          73 ADIEGVTKDQGLNVLFNNAGIAP   95 (248)
T ss_dssp             HHHHHHHGGGCCSEEEECCCCCC
T ss_pred             hhhHHHhhcCCcceEEeeccccc
Confidence            98754  6789999999999854

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.77  E-value=2.1e-18  Score=113.10  Aligned_cols=92  Identities=14%  Similarity=0.131  Sum_probs=76.2

Q ss_pred             CCCCcEEEEecCCC--hHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           14 DLNEKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        14 ~~~~~~~lvtG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .|+||++||||+++  |||+++|+.|+++|++|++++|+++..+ ..+++.+.+       .....+.+|++ ++.+++.
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~-~~~~l~~~~-------~~~~~~~~d~~-~~~~~~~   72 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEK-RVRPIAQEL-------NSPYVYELDVS-KEEHFKS   72 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHH-HHHHHHHHT-------TCCCEEECCTT-CHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHhhC-------CceeEeeeccc-chhhHHH
Confidence            47899999999764  8999999999999999999999865433 344444332       34567889996 8999999


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++++.+.++++|++|||+|+..
T Consensus        73 ~~~~~~~~~g~id~lV~nag~~~   95 (274)
T d2pd4a1          73 LYNSVKKDLGSLDFIVHSVAFAP   95 (274)
T ss_dssp             HHHHHHHHTSCEEEEEECCCCCC
T ss_pred             HHHHHHHHcCCCCeEEeeccccc
Confidence            99999999999999999999753

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.75  E-value=3.9e-18  Score=112.13  Aligned_cols=96  Identities=25%  Similarity=0.263  Sum_probs=72.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecc-cchHHHHHHHhhCCCCCC-----------CCCccceEEEEeecCCC
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVG-----------SPDSVRAVAVELDVCAD   85 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~di~~~   85 (115)
                      .+++|||+++|||+++|+.|++.|++|++++++ .+..+++.+++.......           .........+.+|++ +
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~-~   81 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT-L   81 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBC-H
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCC-C
Confidence            479999999999999999999999999988765 555666777776432100           001123345567785 8


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           86 GATIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        86 ~~~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      +++++++++++.+++|+||+||||||+..
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~  110 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFY  110 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccC
Confidence            99999999999999999999999999864

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.75  E-value=5.9e-18  Score=109.10  Aligned_cols=77  Identities=31%  Similarity=0.370  Sum_probs=62.8

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      |+||++||||+++|||+++|+.|+++|++|++++|+.+.+++       .         ...++.+|+++ .      ++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~-------~---------~~~~~~~Dv~~-~------~~   58 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-------S---------GHRYVVCDLRK-D------LD   58 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-------T---------CSEEEECCTTT-C------HH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh-------c---------CCcEEEcchHH-H------HH
Confidence            679999999999999999999999999999999998755432       1         12457799963 2      45


Q ss_pred             HHHHHcCCccEEEeCCccCC
Q 033624           95 KAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~~  114 (115)
                      .+.+++++||+||||||+..
T Consensus        59 ~~~~~~g~iD~lVnnAG~~~   78 (234)
T d1o5ia_          59 LLFEKVKEVDILVLNAGGPK   78 (234)
T ss_dssp             HHHHHSCCCSEEEECCCCCC
T ss_pred             HHHHHhCCCcEEEecccccC
Confidence            56677899999999999753

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.74  E-value=8.9e-19  Score=114.12  Aligned_cols=82  Identities=20%  Similarity=0.172  Sum_probs=70.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      +++|||+++|||+++|+.|++.|++|++++|+.+..+++......             +..+|++ ++++++++++++.+
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~-------------~~~~dv~-~~~~~~~~~~~~~~   67 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET-------------YPQLKPM-SEQEPAELIEAVTS   67 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH-------------CTTSEEC-CCCSHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc-------------EEEeccC-CHHHHHHHHHHHHH
Confidence            799999999999999999999999999999998887765543321             2347886 67789999999999


Q ss_pred             HcCCccEEEeCCccCC
Q 033624           99 AFGRVDALVNNAGIRG  114 (115)
Q Consensus        99 ~~~~id~li~naG~~~  114 (115)
                      ++|+||+||||||+.+
T Consensus        68 ~~G~iDiLVnNAg~~~   83 (252)
T d1zmta1          68 AYGQVDVLVSNDIFAP   83 (252)
T ss_dssp             HHSCCCEEEEECCCCC
T ss_pred             HcCCCCEEEECCcCCC
Confidence            9999999999999753

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.74  E-value=1.4e-17  Score=108.51  Aligned_cols=91  Identities=27%  Similarity=0.366  Sum_probs=72.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch-HHHHHHHhhCCCCCCCCCccceEEEEeecCC---CHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-LKSLCDEINKPGMVGSPDSVRAVAVELDVCA---DGATIEISV   93 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~---~~~~~~~~~   93 (115)
                      .++||||+++|||+++|+.|+++|++|++++|+.+. .++..+++....      ..+.....+|+.+   ..+.++.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~   75 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR------AGSAVLCKGDLSLSSSLLDCCEDII   75 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS------TTCEEEEECCCSSSTTHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhc------CCceEEEecccccchhHHHHHHHHH
Confidence            479999999999999999999999999999998654 456666666432      2456666655542   356677888


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      +.+.+++++||+||||||+..
T Consensus        76 ~~~~~~~g~iDilvnnAG~~~   96 (266)
T d1mxha_          76 DCSFRAFGRCDVLVNNASAYY   96 (266)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHhCCCCEEEECCccCC
Confidence            889999999999999999864

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.74  E-value=7.9e-18  Score=105.54  Aligned_cols=85  Identities=18%  Similarity=0.266  Sum_probs=71.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      .++.||+++|||+++|||+++++.|+++|++|++++|+.++.++..+.+...        .++....+|++ +.+.++++
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~d~~-~~~~~~~~   89 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR--------FKVNVTAAETA-DDASRAEA   89 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--------HTCCCEEEECC-SHHHHHHH
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc--------cchhhhhhhcc-cHHHHHHH
Confidence            4789999999999999999999999999999999999999998888877643        24556789995 66655543


Q ss_pred             HHHHHHHcCCccEEEeCCccC
Q 033624           93 VQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~  113 (115)
                             ++++|+||||||+.
T Consensus        90 -------~~~iDilin~Ag~g  103 (191)
T d1luaa1          90 -------VKGAHFVFTAGAIG  103 (191)
T ss_dssp             -------TTTCSEEEECCCTT
T ss_pred             -------hcCcCeeeecCccc
Confidence                   56899999999863

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.71  E-value=3.8e-17  Score=106.39  Aligned_cols=89  Identities=22%  Similarity=0.303  Sum_probs=74.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCC-eEEEEeccc---chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV---DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      +++++|||+++|||+++|++|+++|+ +|++++|+.   +..++..++++..+       .++.++.||++ ++++++.+
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g-------~~v~~~~~Dv~-d~~~~~~~   80 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALG-------ARTTVAACDVT-DRESVREL   80 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTT-------CEEEEEECCTT-CHHHHHHH
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhcc-------ccccccccccc-hHHHHHHh
Confidence            56999999999999999999999999 588888864   44566667776544       67999999996 89999999


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++.+.+ .+++|++|||+|+..
T Consensus        81 ~~~i~~-~~~i~~vv~~ag~~~  101 (259)
T d2fr1a1          81 LGGIGD-DVPLSAVFHAAATLD  101 (259)
T ss_dssp             HHTSCT-TSCEEEEEECCCCCC
T ss_pred             hccccc-ccccccccccccccc
Confidence            888754 468999999999865

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=2.1e-17  Score=107.19  Aligned_cols=85  Identities=27%  Similarity=0.413  Sum_probs=67.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..|+||+++|||+++|||+++++.|+++|++|++++|+++++++.    .+.        ..+....+|+. ..+.    
T Consensus         2 ~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~----~~~--------~~~~~~~~d~~-~~~~----   64 (245)
T d2ag5a1           2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQEL----EKY--------PGIQTRVLDVT-KKKQ----   64 (245)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGG----GGS--------TTEEEEECCTT-CHHH----
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----Hhc--------cCCceeeeecc-cccc----
Confidence            458899999999999999999999999999999999997665443    221        23567777874 5543    


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++.....++++|+||||||+..
T Consensus        65 ~~~~~~~~~~id~lVn~ag~~~   86 (245)
T d2ag5a1          65 IDQFANEVERLDVLFNVAGFVH   86 (245)
T ss_dssp             HHHHHHHCSCCSEEEECCCCCC
T ss_pred             ccccccccccceeEEecccccC
Confidence            4455666789999999999864

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.70  E-value=1.2e-16  Score=104.17  Aligned_cols=91  Identities=22%  Similarity=0.254  Sum_probs=72.7

Q ss_pred             CCCCCcEEEEecC--CChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           13 HDLNEKVVMVTGA--SSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        13 ~~~~~~~~lvtG~--~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      ..|+||+++|||+  ++|||+++|+.|+++|++|++++|+.++..+   .+.+..      +.+...+++|++ +++++.
T Consensus         2 ~~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~---~~~~~~------~~~~~~~~~dv~-~~~~~~   71 (268)
T d2h7ma1           2 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ---RITDRL------PAKAPLLELDVQ-NEEHLA   71 (268)
T ss_dssp             CTTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH---HHHTTS------SSCCCEEECCTT-CHHHHH
T ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH---HHHHHc------CCceeeEeeecc-cccccc
Confidence            3578999999995  5789999999999999999999998775432   222221      245678899996 889999


Q ss_pred             HHHHHHHHH---cCCccEEEeCCccC
Q 033624           91 ISVQKAWEA---FGRVDALVNNAGIR  113 (115)
Q Consensus        91 ~~~~~~~~~---~~~id~li~naG~~  113 (115)
                      .+++.+.+.   ++.||++|||+|+.
T Consensus        72 ~~~~~v~~~~~~~~~ld~~i~~ag~~   97 (268)
T d2h7ma1          72 SLAGRVTEAIGAGNKLDGVVHSIGFM   97 (268)
T ss_dssp             HHHHHHHHHHCTTCCEEEEEECCCCC
T ss_pred             cccchhhhccccCCCcceeeeccccc
Confidence            888888665   46799999999975

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=3.3e-16  Score=101.33  Aligned_cols=90  Identities=27%  Similarity=0.314  Sum_probs=80.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .++||+++|||+++|||+++|++|+++|++|++++|+.+.+++..+++.          .......+|+. +...++...
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~----------~~~~~~~~~~~-~~~~~~~~~   70 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG----------NNCVFAPADVT-SEKDVQTAL   70 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC----------TTEEEEECCTT-CHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC----------CCccccccccc-ccccccccc
Confidence            5789999999999999999999999999999999999999998888874          35677888995 888999999


Q ss_pred             HHHHHHcCCccEEEeCCccCC
Q 033624           94 QKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~~  114 (115)
                      ..+...+..+|.+++|+++..
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~   91 (248)
T d2o23a1          71 ALAKGKFGRVDVAVNCAGIAV   91 (248)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC
T ss_pred             ccccccccccccccccccccc
Confidence            999999999999999987653

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=9.4e-17  Score=106.12  Aligned_cols=88  Identities=28%  Similarity=0.405  Sum_probs=68.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEE---ecccchHH---HHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAA---ARRVDRLK---SLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~---~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      .|+++|||+++|||+++|+.|+++|++|+.+   .|+.+...   +..+.+...       +.++..+.+|++ ++++++
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~-------~~~~~~~~~Dv~-~~~~~~   73 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACP-------PGSLETLQLDVR-DSKSVA   73 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCC-------TTSEEEEECCTT-CHHHHH
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhcc-------CCceEEEecccc-chHhhh
Confidence            4788999999999999999999999986544   44444333   334444332       367999999996 899999


Q ss_pred             HHHHHHHHHcCCccEEEeCCccCC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      .+++++.  .+.+|+||||||+..
T Consensus        74 ~~~~~~~--~g~idilvnnag~~~   95 (285)
T d1jtva_          74 AARERVT--EGRVDVLVCNAGLGL   95 (285)
T ss_dssp             HHHHTCT--TSCCSEEEECCCCCC
T ss_pred             hhhhhcc--ccchhhhhhcccccc
Confidence            9888764  378999999999754

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.67  E-value=3.6e-16  Score=101.54  Aligned_cols=91  Identities=15%  Similarity=0.245  Sum_probs=76.5

Q ss_pred             CCCCcEEEEecCCC--hHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           14 DLNEKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        14 ~~~~~~~lvtG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .|+||++||||+++  |||+++|+.|+++|++|++++|++...+...+.....        .+...+..|++ +..++..
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~-~~~~~~~   72 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQL--------GSDIVLQCDVA-EDASIDT   72 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHT--------TCCCEEECCTT-CHHHHHH
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhc--------CCcceeecccc-hHHHHHH
Confidence            47899999999998  8999999999999999999999876555544444332        35667788885 8899999


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                      .+.+....++++|++|||++..
T Consensus        73 ~~~~~~~~~~~~d~~v~~a~~~   94 (258)
T d1qsga_          73 MFAELGKVWPKFDGFVHSIGFA   94 (258)
T ss_dssp             HHHHHHTTCSSEEEEEECCCCC
T ss_pred             HHHHhhhcccccceEEEeeccc
Confidence            9999999999999999999875

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.64  E-value=1.3e-15  Score=100.57  Aligned_cols=101  Identities=19%  Similarity=0.176  Sum_probs=67.7

Q ss_pred             CCCCCcEEEEecCCC--hHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCC---CC-Cccc-eEEEEeecC--
Q 033624           13 HDLNEKVVMVTGASS--GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVG---SP-DSVR-AVAVELDVC--   83 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~---~~-~~~~-~~~~~~di~--   83 (115)
                      .+|+||++||||+++  |||+++|++|+++|++|++++|+...........+......   .. .... -....+|..  
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence            468999999999875  99999999999999999999988654433333222111000   00 0000 122223210  


Q ss_pred             -----------------CCHHHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           84 -----------------ADGATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        84 -----------------~~~~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                                       .+...++.+++++.+.+++||+||||||+.
T Consensus        84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~  130 (297)
T d1d7oa_          84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANG  130 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCC
T ss_pred             ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccc
Confidence                             133456789999999999999999999974

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.57  E-value=6.3e-15  Score=94.78  Aligned_cols=80  Identities=15%  Similarity=0.154  Sum_probs=61.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      +||+++|||+++|||+++|+.|+++|++|++++++....                 ........+|.. +.+..+.+...
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~-----------------~~~~~~~~~~~~-~~~~~~~~~~~   62 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE-----------------ASASVIVKMTDS-FTEQADQVTAE   62 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT-----------------SSEEEECCCCSC-HHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------------ccccceeecccC-cHHHHHHHHHH
Confidence            489999999999999999999999999999998765421                 123345566663 56677777776


Q ss_pred             HHHHc--CCccEEEeCCccC
Q 033624           96 AWEAF--GRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~--~~id~li~naG~~  113 (115)
                      +.+.+  +++|+||||||..
T Consensus        63 ~~~~~~~~~iD~lInnAG~~   82 (236)
T d1dhra_          63 VGKLLGDQKVDAILCVAGGW   82 (236)
T ss_dssp             HHHHHTTCCEEEEEECCCCC
T ss_pred             HHHHhCCCCceEEEECCccc
Confidence            66554  4799999999964

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.56  E-value=4.9e-15  Score=95.17  Aligned_cols=79  Identities=15%  Similarity=0.100  Sum_probs=58.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +.+++|||+++|||+++|++|++.|++|++++|+.....                 .......+|.. ..+......+..
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~-----------------~~~~~~~~~~~-~~~~~~~~~~~~   63 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----------------DSNILVDGNKN-WTEQEQSILEQT   63 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----------------SEEEECCTTSC-HHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc-----------------cccceeccccC-chhHHHHHHHHH
Confidence            345799999999999999999999999999999865311                 12334455663 455555555555


Q ss_pred             HH--HcCCccEEEeCCccC
Q 033624           97 WE--AFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~--~~~~id~li~naG~~  113 (115)
                      ..  ++++||+||||||+.
T Consensus        64 ~~~~~~g~iD~linnAG~~   82 (235)
T d1ooea_          64 ASSLQGSQVDGVFCVAGGW   82 (235)
T ss_dssp             HHHHTTCCEEEEEECCCCC
T ss_pred             HHHhcCCCeeEEEECCccc
Confidence            54  458999999999974

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.53  E-value=1.9e-14  Score=96.55  Aligned_cols=98  Identities=15%  Similarity=0.153  Sum_probs=68.4

Q ss_pred             CCcEEEEec--CCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCC----CCC-ccceEEEE---------
Q 033624           16 NEKVVMVTG--ASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVG----SPD-SVRAVAVE---------   79 (115)
Q Consensus        16 ~~~~~lvtG--~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~---------   79 (115)
                      .+|++||||  +++|||+++|+.|+++|++|++.+++..................    ... ........         
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            378999999  55799999999999999999999988765554444333221000    000 00112222         


Q ss_pred             -----------eecCCCHHHHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           80 -----------LDVCADGATIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        80 -----------~di~~~~~~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                                 +|++ +..+++.+++.+.+.+++||+||||||..+
T Consensus        81 ~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~~~G~iDilVnnag~~~  125 (329)
T d1uh5a_          81 DIDEETKNNKRYNML-QNYTIEDVANLIHQKYGKINMLVHSLANAK  125 (329)
T ss_dssp             GCCHHHHTSHHHHTC-CCCSHHHHHHHHHHHHCCEEEEEECCCCCT
T ss_pred             ccchhhhhhhhhhhh-hHHHHHHHHHHHHHHhCCCCeecccccccc
Confidence                       2453 566788999999999999999999999753

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.43  E-value=4.2e-13  Score=86.59  Aligned_cols=72  Identities=22%  Similarity=0.311  Sum_probs=56.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      |+++|||+++|||+++|++|+++|++|++++|+.++                        ..+|+. +....+....+..
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~------------------------~~~d~~-~~~~~~~~~~~~~   56 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE------------------------VIADLS-TAEGRKQAIADVL   56 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS------------------------EECCTT-SHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH------------------------HHHHhc-CHHHHHHHHHHHH
Confidence            789999999999999999999999999999987431                        124664 5666666555554


Q ss_pred             HH-cCCccEEEeCCccCC
Q 033624           98 EA-FGRVDALVNNAGIRG  114 (115)
Q Consensus        98 ~~-~~~id~li~naG~~~  114 (115)
                      .. .+.+|++|||||+..
T Consensus        57 ~~~~~~id~lv~~Ag~~~   74 (257)
T d1fjha_          57 AKCSKGMDGLVLCAGLGP   74 (257)
T ss_dssp             TTCTTCCSEEEECCCCCT
T ss_pred             HHhCCCCcEEEEcCCCCC
Confidence            44 467999999999753

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.37  E-value=1.7e-12  Score=87.50  Aligned_cols=88  Identities=17%  Similarity=0.204  Sum_probs=61.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH-HHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS-LCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      |++|||||+|.||..++++|++.|++|++++|..+.... ..+.+...   ......++.++++|++ +.+.++..+...
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~Dl~-d~~~~~~~~~~~   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQD---PHTCNPKFHLHYGDLS-DTSNLTRILREV   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC------------------------CCEEECCCCSS-CHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhh---hhhcCCCeEEEEeecC-CHHHHHHHHhcc
Confidence            789999999999999999999999999999986543211 11111110   0112346889999996 888888888765


Q ss_pred             HHHcCCccEEEeCCccCC
Q 033624           97 WEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        97 ~~~~~~id~li~naG~~~  114 (115)
                           .+|++||+|+..+
T Consensus        78 -----~~d~v~h~aa~~~   90 (357)
T d1db3a_          78 -----QPDEVYNLGAMSH   90 (357)
T ss_dssp             -----CCSEEEECCCCCT
T ss_pred             -----CCCEEEEeecccc
Confidence                 7899999998753

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.35  E-value=3.4e-12  Score=85.29  Aligned_cols=85  Identities=18%  Similarity=0.118  Sum_probs=68.1

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      .++|++|||||+|.||..+++.|++.|+.|++++|+.+......+..+..        ..+.++.+|++ +++.+..++.
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~--------~~i~~~~~Dl~-d~~~l~~~~~   76 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVA--------DGMQSEIGDIR-DQNKLLESIR   76 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTT--------TTSEEEECCTT-CHHHHHHHHH
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcc--------cCCeEEEeecc-ChHhhhhhhh
Confidence            46899999999999999999999999999999999876554444433321        35889999996 7887777666


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                      ..     .+|++++.|+..
T Consensus        77 ~~-----~~~~v~~~aa~~   90 (356)
T d1rkxa_          77 EF-----QPEIVFHMAAQP   90 (356)
T ss_dssp             HH-----CCSEEEECCSCC
T ss_pred             hc-----hhhhhhhhhccc
Confidence            54     789999999864

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=1.9e-12  Score=81.18  Aligned_cols=78  Identities=26%  Similarity=0.279  Sum_probs=61.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      ..++++||||+|+||.+++++|+++|++|+++.|+++++..       .      ....+.++.+|++ +.+++..++. 
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~-------~------~~~~~~~~~gD~~-d~~~l~~al~-   66 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-------E------GPRPAHVVVGDVL-QAADVDKTVA-   66 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-------S------SCCCSEEEESCTT-SHHHHHHHHT-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccc-------c------ccccccccccccc-chhhHHHHhc-
Confidence            46789999999999999999999999999999998776321       1      1134778999996 7776655433 


Q ss_pred             HHHHcCCccEEEeCCccCC
Q 033624           96 AWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~~  114 (115)
                            ..|++|+++|...
T Consensus        67 ------~~d~vi~~~g~~~   79 (205)
T d1hdoa_          67 ------GQDAVIVLLGTRN   79 (205)
T ss_dssp             ------TCSEEEECCCCTT
T ss_pred             ------CCCEEEEEeccCC
Confidence                  5799999998643

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.31  E-value=8.4e-12  Score=84.69  Aligned_cols=85  Identities=19%  Similarity=0.170  Sum_probs=61.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc----------------chHHHHHHHhhCCCCCCCCCccceEEEEe
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV----------------DRLKSLCDEINKPGMVGSPDSVRAVAVEL   80 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (115)
                      |+++||||++|.||..++++|++.|+.|++++.-.                .........+...      ...++.++.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~i~~~~~   74 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL------TGKSIELYVG   74 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH------HCCCCEEEES
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhh------cCCCcEEEEc
Confidence            67899999999999999999999999999986211                1111111111111      0235789999


Q ss_pred             ecCCCHHHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           81 DVCADGATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        81 di~~~~~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      |++ +.+.++.+++..     ++|++||.|+..
T Consensus        75 Dl~-d~~~l~~~~~~~-----~~d~ViHlAa~~  101 (393)
T d1i24a_          75 DIC-DFEFLAESFKSF-----EPDSVVHFGEQR  101 (393)
T ss_dssp             CTT-SHHHHHHHHHHH-----CCSEEEECCSCC
T ss_pred             cCC-CHHHHHHHHHhh-----cchheecccccc
Confidence            996 888888887765     799999999864

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.30  E-value=3.1e-11  Score=79.75  Aligned_cols=81  Identities=14%  Similarity=0.066  Sum_probs=62.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecc-cchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARR-VDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      ++|||||+|.||..+++.|+++|++|+++++- ..........+...        .++.++.+|++ +.+.+..+++.. 
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~--------~~~~~i~~Di~-~~~~l~~~~~~~-   71 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL--------GNFEFVHGDIR-NKNDVTRLITKY-   71 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT--------CCCEEEECCTT-CHHHHHHHHHHH-
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhcc--------CCcEEEEcccC-CHHHHHHHHHhc-
Confidence            58999999999999999999999999988742 22222333334332        36788999996 788887777654 


Q ss_pred             HHcCCccEEEeCCccC
Q 033624           98 EAFGRVDALVNNAGIR  113 (115)
Q Consensus        98 ~~~~~id~li~naG~~  113 (115)
                          ++|++||+|+..
T Consensus        72 ----~~d~Vih~aa~~   83 (338)
T d1orra_          72 ----MPDSCFHLAGQV   83 (338)
T ss_dssp             ----CCSEEEECCCCC
T ss_pred             ----CCceEEeecccc
Confidence                689999999864

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.29  E-value=1.6e-11  Score=78.26  Aligned_cols=75  Identities=35%  Similarity=0.452  Sum_probs=59.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      .|++||||+++|||+++|+.|+++|++|++++|+.+.                   .+....++|++ .......+....
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-------------------~~~~~~~~d~~-~~~~~~~~~~~~   60 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG-------------------EDLIYVEGDVT-REEDVRRAVARA   60 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-------------------SSSEEEECCTT-CHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc-------------------ccceEeecccc-chhhhHHHHHhh
Confidence            3899999999999999999999999999999987542                   34667889996 788888777776


Q ss_pred             HHHcCCccEEEeCCcc
Q 033624           97 WEAFGRVDALVNNAGI  112 (115)
Q Consensus        97 ~~~~~~id~li~naG~  112 (115)
                      .... ..+.+++++++
T Consensus        61 ~~~~-~~~~~~~~~~~   75 (241)
T d1uaya_          61 QEEA-PLFAVVSAAGV   75 (241)
T ss_dssp             HHHS-CEEEEEECCCC
T ss_pred             hccc-cccchhhhhhc
Confidence            6555 45555666554

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.29  E-value=4.4e-12  Score=84.65  Aligned_cols=80  Identities=20%  Similarity=0.376  Sum_probs=60.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccch---HHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR---LKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      ++|||||+|.||..+++.|+++|++|++++|....   .....+.+..         .++.++++|++ +.+.+..+++.
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~---------~~~~~~~~Dl~-d~~~l~~~~~~   71 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGG---------KHPTFVEGDIR-NEALMTEILHD   71 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHT---------SCCEEEECCTT-CHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcC---------CCCEEEEeecC-CHHHHHHHHhc
Confidence            49999999999999999999999999998763222   1122222321         36888999996 78777777665


Q ss_pred             HHHHcCCccEEEeCCccC
Q 033624           96 AWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~  113 (115)
                      .     ++|++||+|+..
T Consensus        72 ~-----~~d~ViHlAa~~   84 (338)
T d1udca_          72 H-----AIDTVIHFAGLK   84 (338)
T ss_dssp             T-----TCSEEEECCSCC
T ss_pred             c-----CCCEEEECCCcc
Confidence            3     689999999864

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.28  E-value=9.4e-12  Score=82.62  Aligned_cols=85  Identities=15%  Similarity=0.175  Sum_probs=61.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch-----HHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-----LKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      |++|||||+|.||..+++.|+++|++|++++|..+.     ..........      .....+.++.+|++ +.+.+...
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~Di~-~~~~~~~~   74 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHN------VNKALMKLHYADLT-DASSLRRW   74 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------------CCEEEEECCTT-CHHHHHHH
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhh------ccccceEEEEcccc-CHHHHHHH
Confidence            689999999999999999999999999999985431     1111111110      11245788999996 78777777


Q ss_pred             HHHHHHHcCCccEEEeCCccCC
Q 033624           93 VQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~~~  114 (115)
                      ++..     ++|++||+|+..+
T Consensus        75 ~~~~-----~~D~Vih~Aa~~~   91 (339)
T d1n7ha_          75 IDVI-----KPDEVYNLAAQSH   91 (339)
T ss_dssp             HHHH-----CCSEEEECCSCCC
T ss_pred             Hhhh-----ccchhhhcccccc
Confidence            6654     7999999998753

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.27  E-value=7.9e-12  Score=83.63  Aligned_cols=81  Identities=23%  Similarity=0.432  Sum_probs=60.7

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc-hHH--HHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD-RLK--SLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      |.+|||||+|.||..++++|+++|++|+++++... ...  ...+.+..         ..+.++.+|++ +.+.++.++.
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~---------~~v~~~~~Dl~-d~~~l~~~~~   71 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK---------HHIPFYEVDLC-DRKGLEKVFK   71 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHT---------SCCCEEECCTT-CHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcc---------cCCeEEEeecC-CHHHHHHHHh
Confidence            68999999999999999999999999999875322 111  11222221         35778899996 7887777665


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                      ..     ++|++||+|+..
T Consensus        72 ~~-----~~d~VihlAa~~   85 (347)
T d1z45a2          72 EY-----KIDSVIHFAGLK   85 (347)
T ss_dssp             HS-----CCCEEEECCSCC
T ss_pred             cc-----CCCEEEEccccc
Confidence            42     799999999864

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=7.3e-11  Score=78.70  Aligned_cols=83  Identities=22%  Similarity=0.258  Sum_probs=61.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc------cc---hHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR------VD---RLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGA   87 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~   87 (115)
                      .|++|||||+|.||..++++|+++|++|+++++.      ..   ...+....+.         ..++.++.+|++ +.+
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~Dl~-d~~   71 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT---------GRSVEFEEMDIL-DQG   71 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH---------TCCCEEEECCTT-CHH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhc---------CCCcEEEEeecc-ccc
Confidence            4789999999999999999999999999998642      11   1112222232         246889999996 787


Q ss_pred             HHHHHHHHHHHHcCCccEEEeCCccCC
Q 033624           88 TIEISVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        88 ~~~~~~~~~~~~~~~id~li~naG~~~  114 (115)
                      .+..++..     ..+++++|+|++.+
T Consensus        72 ~l~~~~~~-----~~~~~i~h~Aa~~~   93 (346)
T d1ek6a_          72 ALQRLFKK-----YSFMAVIHFAGLKA   93 (346)
T ss_dssp             HHHHHHHH-----CCEEEEEECCSCCC
T ss_pred             cccccccc-----cccccccccccccC
Confidence            77776654     36889999998753

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.12  E-value=3e-10  Score=74.73  Aligned_cols=82  Identities=20%  Similarity=0.174  Sum_probs=61.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchH-HHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRL-KSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      |++||||++|.||..++++|+++|++|+.++|..+.. ....+.+..        ..++.++.+|++ +...+...+...
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~--------~~~~~~~~~Dl~-d~~~~~~~~~~~   71 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGI--------EGDIQYEDGDMA-DACSVQRAVIKA   71 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTC--------GGGEEEEECCTT-CHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcc--------cCCcEEEEcccc-ChHHhhhhhccc
Confidence            6899999999999999999999999999999865431 122222221        246889999996 787777766654


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                           ..++++++|+..
T Consensus        72 -----~~~~~~~~a~~~   83 (321)
T d1rpna_          72 -----QPQEVYNLAAQS   83 (321)
T ss_dssp             -----CCSEEEECCSCC
T ss_pred             -----cccccccccccc
Confidence                 567888887653

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.09  E-value=2.2e-10  Score=77.14  Aligned_cols=84  Identities=18%  Similarity=0.242  Sum_probs=58.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      ++|||||+|.||..++++|++.|+.|++..++...... ...+....     ...++.++.+|++ +...+..+++..  
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~-~~~~~~~~-----~~~~~~~~~~Dl~-d~~~l~~~~~~~--   72 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN-LESLSDIS-----ESNRYNFEHADIC-DSAEITRIFEQY--   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC-GGGGTTTT-----TCTTEEEEECCTT-CHHHHHHHHHHH--
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc-HHHHHhhh-----hcCCcEEEEccCC-CHHHHHHHHHhC--
Confidence            58999999999999999999999986554332211100 11121111     1246889999996 788887777654  


Q ss_pred             HcCCccEEEeCCccCC
Q 033624           99 AFGRVDALVNNAGIRG  114 (115)
Q Consensus        99 ~~~~id~li~naG~~~  114 (115)
                         ++|++||+|+..+
T Consensus        73 ---~~d~VihlAa~~~   85 (361)
T d1kewa_          73 ---QPDAVMHLAAESH   85 (361)
T ss_dssp             ---CCSEEEECCSCCC
T ss_pred             ---CCCEEEECccccc
Confidence               7999999998643

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=3e-10  Score=75.52  Aligned_cols=83  Identities=14%  Similarity=0.148  Sum_probs=58.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccch-----HHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR-----LKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+|||||+|.||..++++|+++|++|++++|..+.     .+.......      .....++.++.+|++ +...+..++
T Consensus         3 I~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~Dl~-d~~~~~~~~   75 (347)
T d1t2aa_           3 VALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQ------AHIEGNMKLHYGDLT-DSTCLVKII   75 (347)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------------CEEEEECCTT-CHHHHHHHH
T ss_pred             EEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchh------hhccCCcEEEEeecC-CchhhHHHH
Confidence            34999999999999999999999999999986532     111111111      011246889999996 888888877


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                      ...     .++++++.++..
T Consensus        76 ~~~-----~~~~v~~~~a~~   90 (347)
T d1t2aa_          76 NEV-----KPTEIYNLGAQS   90 (347)
T ss_dssp             HHH-----CCSEEEECCSCC
T ss_pred             hhc-----ccceeeeeeecc
Confidence            664     678888887754

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.05  E-value=3.9e-10  Score=70.73  Aligned_cols=75  Identities=24%  Similarity=0.213  Sum_probs=55.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCe--EEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCR--IVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      -+++||||++|+||+.+++.|+++|+.  |+...|+++...    .+.          ..+..+.+|++ +.+++..++ 
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~----~~~----------~~~~~~~~d~~-~~~~~~~~~-   66 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE----KIG----------GEADVFIGDIT-DADSINPAF-   66 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHH----HTT----------CCTTEEECCTT-SHHHHHHHH-
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHH----hcc----------CCcEEEEeeec-ccccccccc-
Confidence            368999999999999999999999976  455567665432    221          24668889995 666555443 


Q ss_pred             HHHHHcCCccEEEeCCccC
Q 033624           95 KAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        95 ~~~~~~~~id~li~naG~~  113 (115)
                            ..+|.+||+++..
T Consensus        67 ------~~~d~vi~~a~~~   79 (252)
T d2q46a1          67 ------QGIDALVILTSAV   79 (252)
T ss_dssp             ------TTCSEEEECCCCC
T ss_pred             ------ccceeeEEEEeec
Confidence                  3689999999864

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.03  E-value=1.7e-10  Score=76.92  Aligned_cols=85  Identities=18%  Similarity=0.196  Sum_probs=60.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .|+++||||++|.||..+++.|+++|++|+++.|+.+......+......     .......+..|++ +...+..+   
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~-~~~~~~~~---   80 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-----PGRFETAVVEDML-KQGAYDEV---   80 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-----TTTEEEEECSCTT-STTTTTTT---
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccc-----cccccEEEecccc-chhhhhhh---
Confidence            49999999999999999999999999999999998766555443322111     0123445667886 54443332   


Q ss_pred             HHHHcCCccEEEeCCccC
Q 033624           96 AWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~  113 (115)
                          ....|.++++++..
T Consensus        81 ----~~~~~~v~~~a~~~   94 (342)
T d1y1pa1          81 ----IKGAAGVAHIASVV   94 (342)
T ss_dssp             ----TTTCSEEEECCCCC
T ss_pred             ----cccchhhhhhcccc
Confidence                23579999988764

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.02  E-value=4e-09  Score=71.06  Aligned_cols=90  Identities=17%  Similarity=0.197  Sum_probs=61.4

Q ss_pred             EEEEecCCChHHHHHHHHHHH-hCCeEEEEec---------ccchHHHHHHHhhCCC-CCCCCCccceEEEEeecCCCHH
Q 033624           19 VVMVTGASSGLGREFCLDLAK-AGCRIVAAAR---------RVDRLKSLCDEINKPG-MVGSPDSVRAVAVELDVCADGA   87 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~-~g~~v~~~~r---------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~di~~~~~   87 (115)
                      ++|||||+|.||..++++|++ .|++|+++++         ..+..+.....+.... .........+.++.+|++ +.+
T Consensus         4 KVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~-d~~   82 (383)
T d1gy8a_           4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVR-NED   82 (383)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTT-CHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECccc-CHH
Confidence            699999999999999999986 5889998863         1122333333333221 111222345788999996 777


Q ss_pred             HHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           88 TIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        88 ~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .++.++.    ...++|++||+|+..
T Consensus        83 ~l~~~~~----~~~~~d~ViH~Aa~~  104 (383)
T d1gy8a_          83 FLNGVFT----RHGPIDAVVHMCAFL  104 (383)
T ss_dssp             HHHHHHH----HSCCCCEEEECCCCC
T ss_pred             Hhhhhhh----ccceeehhhcccccc
Confidence            6666554    456799999999864

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.00  E-value=9.6e-10  Score=72.99  Aligned_cols=77  Identities=17%  Similarity=0.217  Sum_probs=54.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHhC-CeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      ++|||||+|.||..++++|+++| +.|+++++.........            ...++.++.+|+++..+..+....   
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~------------~~~~~~~i~~Di~~~~~~~~~~~~---   66 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL------------NHPHFHFVEGDISIHSEWIEYHVK---   66 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT------------TCTTEEEEECCTTTCSHHHHHHHH---
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc------------cCCCeEEEECccCChHHHHHHHHh---
Confidence            58999999999999999999998 57888877544322111            124688999999743332222211   


Q ss_pred             HHcCCccEEEeCCccCC
Q 033624           98 EAFGRVDALVNNAGIRG  114 (115)
Q Consensus        98 ~~~~~id~li~naG~~~  114 (115)
                          .+|++||+|+...
T Consensus        67 ----~~d~Vih~a~~~~   79 (342)
T d2blla1          67 ----KCDVVLPLVAIAT   79 (342)
T ss_dssp             ----HCSEEEECBCCCC
T ss_pred             ----CCCcccccccccc
Confidence                4799999998753

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=3.6e-10  Score=71.81  Aligned_cols=79  Identities=19%  Similarity=0.185  Sum_probs=57.5

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC--eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .+.+++++||||+|.||..++++|+++|.  +|++++|++.....             .....+....+|+. +.     
T Consensus        11 ~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~-------------~~~~~i~~~~~D~~-~~-----   71 (232)
T d2bkaa1          11 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-------------EAYKNVNQEVVDFE-KL-----   71 (232)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS-------------GGGGGCEEEECCGG-GG-----
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc-------------cccceeeeeeeccc-cc-----
Confidence            35678999999999999999999999996  79999987643211             11234566667774 32     


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                        +.+.+.+...|++|+++|..
T Consensus        72 --~~~~~~~~~~d~vi~~~~~~   91 (232)
T d2bkaa1          72 --DDYASAFQGHDVGFCCLGTT   91 (232)
T ss_dssp             --GGGGGGGSSCSEEEECCCCC
T ss_pred             --cccccccccccccccccccc
Confidence              33445556789999999863

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.92  E-value=2.7e-09  Score=71.34  Aligned_cols=82  Identities=16%  Similarity=0.103  Sum_probs=57.9

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .++.++.++|||||+|.||..++++|.++|++|+++++......             ........+..+|+. +.+.+..
T Consensus        10 ~~~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~-------------~~~~~~~~~~~~D~~-~~~~~~~   75 (363)
T d2c5aa1          10 YWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM-------------TEDMFCDEFHLVDLR-VMENCLK   75 (363)
T ss_dssp             SCTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS-------------CGGGTCSEEEECCTT-SHHHHHH
T ss_pred             cCCCCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch-------------hhhcccCcEEEeech-hHHHHHH
Confidence            44556778999999999999999999999999999886543210             000123457778885 5544433


Q ss_pred             HHHHHHHHcCCccEEEeCCccCC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIRG  114 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~~  114 (115)
                      .       ...+|.+||+|+...
T Consensus        76 ~-------~~~~d~Vih~a~~~~   91 (363)
T d2c5aa1          76 V-------TEGVDHVFNLAADMG   91 (363)
T ss_dssp             H-------HTTCSEEEECCCCCC
T ss_pred             H-------hhcCCeEeecccccc
Confidence            2       236899999997653

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=98.89  E-value=3.3e-09  Score=68.21  Aligned_cols=61  Identities=20%  Similarity=0.344  Sum_probs=50.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      +++||||+|.||..++++|.++|++|+.++|+.                            +|++ +...++.+++..  
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------------------~D~~-d~~~~~~~l~~~--   51 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------------------LDIT-NVLAVNKFFNEK--   51 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------------------CCTT-CHHHHHHHHHHH--
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh----------------------------ccCC-CHHHHHHHHHHc--
Confidence            489999999999999999999999999987642                            3674 777777776654  


Q ss_pred             HcCCccEEEeCCccC
Q 033624           99 AFGRVDALVNNAGIR  113 (115)
Q Consensus        99 ~~~~id~li~naG~~  113 (115)
                         ++|++||+|+..
T Consensus        52 ---~~d~vih~a~~~   63 (281)
T d1vl0a_          52 ---KPNVVINCAAHT   63 (281)
T ss_dssp             ---CCSEEEECCCCC
T ss_pred             ---CCCEEEeecccc
Confidence               689999998764

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.84  E-value=2.4e-08  Score=66.37  Aligned_cols=78  Identities=15%  Similarity=0.183  Sum_probs=55.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      +.|+++|||++|.||..+++.|++.|++|+++.|+.+....  ..+...        ..+..+.+|++++.+.++.+   
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~~--------~~v~~~~gD~~d~~~~~~~a---   68 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQAI--------PNVTLFQGPLLNNVPLMDTL---   68 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHTS--------TTEEEEESCCTTCHHHHHHH---
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhccc--------CCCEEEEeeCCCcHHHHHHH---
Confidence            36889999999999999999999999999999998776542  222221        24778889997444333322   


Q ss_pred             HHHHcCCccEEEeCC
Q 033624           96 AWEAFGRVDALVNNA  110 (115)
Q Consensus        96 ~~~~~~~id~li~na  110 (115)
                          +...|.++.+.
T Consensus        69 ----~~~~~~~~~~~   79 (350)
T d1xgka_          69 ----FEGAHLAFINT   79 (350)
T ss_dssp             ----HTTCSEEEECC
T ss_pred             ----hcCCceEEeec
Confidence                33567666554

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=98.80  E-value=4.4e-09  Score=67.94  Aligned_cols=65  Identities=23%  Similarity=0.300  Sum_probs=48.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWE   98 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~   98 (115)
                      ++||||++|.||..+++.|.+.|. ++.++++..                        .+..|++ +.+.++.++...  
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~------------------------~~~~Dl~-~~~~~~~~i~~~--   53 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSK------------------------EFCGDFS-NPKGVAETVRKL--   53 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCS------------------------SSCCCTT-CHHHHHHHHHHH--
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCc------------------------cccCcCC-CHHHHHHHHHHc--
Confidence            489999999999999999999885 444443321                        1235885 788887777664  


Q ss_pred             HcCCccEEEeCCccCC
Q 033624           99 AFGRVDALVNNAGIRG  114 (115)
Q Consensus        99 ~~~~id~li~naG~~~  114 (115)
                         ++|++||+||+.+
T Consensus        54 ---~~D~Vih~Aa~~~   66 (298)
T d1n2sa_          54 ---RPDVIVNAAAHTA   66 (298)
T ss_dssp             ---CCSEEEECCCCCC
T ss_pred             ---CCCEEEEeccccc
Confidence               6899999998753

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=4.4e-09  Score=69.29  Aligned_cols=75  Identities=16%  Similarity=0.154  Sum_probs=49.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      |+++|||++|.||..++++|+++|++|+++++......+.......        ..++.....|+..             
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~--------~~~~d~~~~~~~~-------------   60 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIG--------HENFELINHDVVE-------------   60 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTT--------CTTEEEEECCTTS-------------
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcC--------CCceEEEehHHHH-------------
Confidence            6899999999999999999999999999988643221111111111        1234444444431             


Q ss_pred             HHcCCccEEEeCCccC
Q 033624           98 EAFGRVDALVNNAGIR  113 (115)
Q Consensus        98 ~~~~~id~li~naG~~  113 (115)
                      ..+.++|++||+|+..
T Consensus        61 ~~~~~~d~VihlAa~~   76 (312)
T d2b69a1          61 PLYIEVDQIYHLASPA   76 (312)
T ss_dssp             CCCCCCSEEEECCSCC
T ss_pred             HHHcCCCEEEECcccC
Confidence            1234689999999864

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=98.77  E-value=3.5e-08  Score=63.88  Aligned_cols=78  Identities=13%  Similarity=0.113  Sum_probs=55.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchH----HHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRL----KSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      +++|||||+|.||+.++++|+++|++|+++.|+....    ......+..         ..+..+.+|++ +.+.+...+
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~---------~~v~~v~~d~~-d~~~~~~~~   73 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQ---------LGAKLIEASLD-DHQRLVDAL   73 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHT---------TTCEEECCCSS-CHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhcc---------CCcEEEEeecc-cchhhhhhc
Confidence            4599999999999999999999999999999875421    122223322         34778889996 665554433


Q ss_pred             HHHHHHcCCccEEEeCCcc
Q 033624           94 QKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~  112 (115)
                             ...+.++++++.
T Consensus        74 -------~~~~~~~~~~~~   85 (312)
T d1qyda_          74 -------KQVDVVISALAG   85 (312)
T ss_dssp             -------TTCSEEEECCCC
T ss_pred             -------cCcchhhhhhhh
Confidence                   356788887654

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.75  E-value=1.1e-08  Score=68.02  Aligned_cols=80  Identities=20%  Similarity=0.178  Sum_probs=53.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc---chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV---DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      -+.+|||||+|.||..++++|++.|+.|.++.++.   .........+         ...++.++.+|++ +...+..++
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~---------~~~~i~~~~~Di~-d~~~~~~~~   71 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI---------LGDRVELVVGDIA-DAELVDKLA   71 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG---------CSSSEEEEECCTT-CHHHHHHHH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHh---------hcCCeEEEEccCC-CHHHHHHHH
Confidence            35799999999999999999999998765554431   1100001111         1246889999996 766655543


Q ss_pred             HHHHHHcCCccEEEeCCccC
Q 033624           94 QKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~~  113 (115)
                             ...|.+++.|+..
T Consensus        72 -------~~~~~v~~~a~~~   84 (346)
T d1oc2a_          72 -------AKADAIVHYAAES   84 (346)
T ss_dssp             -------TTCSEEEECCSCC
T ss_pred             -------hhhhhhhhhhhcc
Confidence                   3568888988764

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.74  E-value=5.5e-08  Score=62.50  Aligned_cols=79  Identities=19%  Similarity=0.253  Sum_probs=56.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHH-----HHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK-----SLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      -+++|||||+|.||..++++|++.|++|++++|+.....     .....+..         ..+.++.+|+. +......
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~---------~~~~~~~~d~~-~~~~~~~   72 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA---------SGANIVHGSID-DHASLVE   72 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHT---------TTCEEECCCTT-CHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhcc---------CCcEEEEeecc-cchhhhh
Confidence            467999999999999999999999999999998754321     12223322         24667888995 6655444


Q ss_pred             HHHHHHHHcCCccEEEeCCcc
Q 033624           92 SVQKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~  112 (115)
                      .++       ..+.++++++.
T Consensus        73 ~~~-------~~~~vi~~~~~   86 (307)
T d1qyca_          73 AVK-------NVDVVISTVGS   86 (307)
T ss_dssp             HHH-------TCSEEEECCCG
T ss_pred             hhh-------hceeeeecccc
Confidence            332       46888888764

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.74  E-value=3.1e-08  Score=65.60  Aligned_cols=84  Identities=17%  Similarity=0.186  Sum_probs=55.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc----hHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD----RLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .-|++||||++|.||..++++|.+.|++|+++++...    ............      ....+.++.+|+. +......
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~d~~-d~~~~~~   87 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEK------QWSNFKFIQGDIR-NLDDCNN   87 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHH------HHTTEEEEECCTT-SHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhc------ccCCeeEEeeccc-ccccccc
Confidence            4679999999999999999999999999999986332    122221111100      1135778889995 5543332


Q ss_pred             HHHHHHHHcCCccEEEeCCccC
Q 033624           92 SVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~naG~~  113 (115)
                             .....+.+++.++..
T Consensus        88 -------~~~~~~~v~~~~a~~  102 (341)
T d1sb8a_          88 -------ACAGVDYVLHQAALG  102 (341)
T ss_dssp             -------HHTTCSEEEECCSCC
T ss_pred             -------ccccccccccccccc
Confidence                   233568888877653

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=98.66  E-value=5e-08  Score=63.76  Aligned_cols=64  Identities=20%  Similarity=0.252  Sum_probs=48.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      |++||||++|.||..++++|+++|+.+++.++..                           ++|++ +...+..++..  
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~---------------------------~~~~~-~~~~~~~~~~~--   52 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------------ELNLL-DSRAVHDFFAS--   52 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------------TCCTT-CHHHHHHHHHH--
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch---------------------------hcccc-CHHHHHHHHhh--
Confidence            6799999999999999999999999988765321                           14664 66666665543  


Q ss_pred             HHcCCccEEEeCCccCC
Q 033624           98 EAFGRVDALVNNAGIRG  114 (115)
Q Consensus        98 ~~~~~id~li~naG~~~  114 (115)
                         ..+|.++++|+..+
T Consensus        53 ---~~~d~v~~~a~~~~   66 (315)
T d1e6ua_          53 ---ERIDQVYLAAAKVG   66 (315)
T ss_dssp             ---HCCSEEEECCCCCC
T ss_pred             ---cCCCEEEEcchhcc
Confidence               26888998886643

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.65  E-value=3e-08  Score=60.31  Aligned_cols=46  Identities=28%  Similarity=0.471  Sum_probs=40.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCC
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKP   64 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~   64 (115)
                      ++.|+||+|+||+++|+.|+++|++|++.+|++++.+++.+++...
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~   47 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI   47 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            3667788899999999999999999999999999998888887643

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.40  E-value=4e-07  Score=56.39  Aligned_cols=34  Identities=24%  Similarity=0.385  Sum_probs=29.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCC--eEEEEecc
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARR   50 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~   50 (115)
                      .|+++||||+|.||+.++++|+++|+  +|+...|+
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~   37 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARK   37 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCC
Confidence            47899999999999999999999997  45655654

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=98.32  E-value=2e-06  Score=51.88  Aligned_cols=50  Identities=22%  Similarity=0.325  Sum_probs=44.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCC
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKP   64 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~   64 (115)
                      .+.++.++|.|+ ||.+++++..|.+.|.+|.++.|+.++.+++.+.+...
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~   64 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT   64 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhc
Confidence            467999999998 89999999999999999999999999998888877643

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.31  E-value=2.4e-06  Score=51.92  Aligned_cols=41  Identities=22%  Similarity=0.376  Sum_probs=36.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      .|.+++|+|+++++|...++.....|++|+.+.+++++.+.
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~   69 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAY   69 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHH
Confidence            48999999999999999999888999999999988776544

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=98.29  E-value=2e-06  Score=56.26  Aligned_cols=78  Identities=22%  Similarity=0.239  Sum_probs=50.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEE------eccc--chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAA------ARRV--DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~------~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      +++|||++|.||..+++.|+++|+.|...      +...  ..... ...+.        ...++.++..|++ +.....
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~-~~~~~--------~~~~~~~~~~d~~-~~~~~~   71 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRAN-LAPVD--------ADPRLRFVHGDIR-DAGLLA   71 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGG-GGGGT--------TCTTEEEEECCTT-CHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhH-hhhhh--------cCCCeEEEEeccc-cchhhh
Confidence            58999999999999999999999865433      2211  11111 11111        1246888999995 554333


Q ss_pred             HHHHHHHHHcCCccEEEeCCccC
Q 033624           91 ISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~~  113 (115)
                             ......|.++|+|+..
T Consensus        72 -------~~~~~~d~vi~~a~~~   87 (322)
T d1r6da_          72 -------RELRGVDAIVHFAAES   87 (322)
T ss_dssp             -------HHTTTCCEEEECCSCC
T ss_pred             -------ccccccceEEeecccc
Confidence                   2344789999999764

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=98.28  E-value=2e-06  Score=52.66  Aligned_cols=86  Identities=13%  Similarity=0.149  Sum_probs=53.8

Q ss_pred             CcEEEE-ecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           17 EKVVMV-TGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        17 ~~~~lv-tG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      |..++| +|+++++|...++.....|++|+++.++.+..++..+.+++.+       ... .+..|-.+.. .....+.+
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lG-------ad~-vi~~~~~~~~-~~~~~v~~   99 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELG-------ATQ-VITEDQNNSR-EFGPTIKE   99 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHT-------CSE-EEEHHHHHCG-GGHHHHHH
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcc-------ccE-EEeccccchh-HHHHHHHH
Confidence            554455 7899999999888888889999999988887777666665543       211 2222110111 12222333


Q ss_pred             HHH-HcCCccEEEeCCc
Q 033624           96 AWE-AFGRVDALVNNAG  111 (115)
Q Consensus        96 ~~~-~~~~id~li~naG  111 (115)
                      +.. ..+.+|+++++.|
T Consensus       100 ~~~~~g~~vdvv~D~vg  116 (189)
T d1gu7a2         100 WIKQSGGEAKLALNCVG  116 (189)
T ss_dssp             HHHHHTCCEEEEEESSC
T ss_pred             HHhhccCCceEEEECCC
Confidence            332 3457999999876

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.26  E-value=3.9e-06  Score=51.06  Aligned_cols=82  Identities=21%  Similarity=0.283  Sum_probs=57.1

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHH---HhhCCCCCCCCCccceEEEEeecCCCHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCD---EINKPGMVGSPDSVRAVAVELDVCADGATI   89 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~di~~~~~~~   89 (115)
                      ++.+++++|.|+ ||.+++++..|.+.|. ++.++.|+.+..++...   .+...        ........++. +.+.+
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~--------~~~~~~~~~~~-~~~~~   84 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNEN--------TDCVVTVTDLA-DQQAF   84 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH--------SSCEEEEEETT-CHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhh--------cCcceEeeecc-cccch
Confidence            578999999999 7999999999999998 58888998877665443   33322        12334456664 54443


Q ss_pred             HHHHHHHHHHcCCccEEEeCCcc
Q 033624           90 EISVQKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        90 ~~~~~~~~~~~~~id~li~naG~  112 (115)
                      ...       ....|++||+..+
T Consensus        85 ~~~-------~~~~diiIN~Tp~  100 (182)
T d1vi2a1          85 AEA-------LASADILTNGTKV  100 (182)
T ss_dssp             HHH-------HHTCSEEEECSST
T ss_pred             hhh-------hcccceeccccCC
Confidence            332       2357999999754

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.26  E-value=6.5e-06  Score=49.22  Aligned_cols=82  Identities=17%  Similarity=0.198  Sum_probs=54.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .|.+++|+| +|++|...++.+...|++|+++++++++.+.+.+ +-          ... .+..|-  .........++
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~g----------a~~-~~~~~~--~~~~~~~~~~~   90 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-CG----------ADV-TLVVDP--AKEEESSIIER   90 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TT----------CSE-EEECCT--TTSCHHHHHHH
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-cC----------CcE-EEeccc--cccccchhhhh
Confidence            477899997 5899999999888899999999999888765444 21          111 122222  12223333444


Q ss_pred             HHHHc-CCccEEEeCCcc
Q 033624           96 AWEAF-GRVDALVNNAGI  112 (115)
Q Consensus        96 ~~~~~-~~id~li~naG~  112 (115)
                      +.... ..+|++|.++|.
T Consensus        91 ~~~~~g~g~D~vid~~g~  108 (170)
T d1e3ja2          91 IRSAIGDLPNVTIDCSGN  108 (170)
T ss_dssp             HHHHSSSCCSEEEECSCC
T ss_pred             hhcccccCCceeeecCCC
Confidence            44443 368999999874

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=98.24  E-value=6.3e-06  Score=49.72  Aligned_cols=75  Identities=25%  Similarity=0.332  Sum_probs=56.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.+++++|.|+ ||.+++++..|.+.+.+|.++.|+.++.+.+.+.+....        .+.....|..          
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~--------~~~~~~~~~~----------   75 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG--------NIQAVSMDSI----------   75 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS--------CEEEEEGGGC----------
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc--------ccchhhhccc----------
Confidence            567999999988 888999999999888889999999999999888886432        3333333321          


Q ss_pred             HHHHHHcCCccEEEeCCcc
Q 033624           94 QKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG~  112 (115)
                           .....|++||++.+
T Consensus        76 -----~~~~~diiIN~tp~   89 (171)
T d1p77a1          76 -----PLQTYDLVINATSA   89 (171)
T ss_dssp             -----CCSCCSEEEECCCC
T ss_pred             -----cccccceeeecccc
Confidence                 12467999998654

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.20  E-value=3.9e-06  Score=50.15  Aligned_cols=48  Identities=27%  Similarity=0.517  Sum_probs=42.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHh
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~   61 (115)
                      .++.++.++|.|+ |.+|..+++.|...|+ ++.++.|+.++.+++.+.+
T Consensus        20 ~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~   68 (159)
T d1gpja2          20 GSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL   68 (159)
T ss_dssp             SCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH
T ss_pred             CCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh
Confidence            3678999999998 9999999999999998 5889999988888877766

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=98.15  E-value=1.9e-05  Score=47.48  Aligned_cols=44  Identities=14%  Similarity=0.286  Sum_probs=38.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      .|.+++|+|+++++|...++.....|++|+++++++++.+.+.+
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~   71 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK   71 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh
Confidence            48899999999999999999888899999999999888765443

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=9.1e-06  Score=48.85  Aligned_cols=41  Identities=29%  Similarity=0.389  Sum_probs=35.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      .|.+++|+|+++++|...++.....|++|+++++++++.+.
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~   68 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI   68 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccccc
Confidence            58899999999999999999888899999999887765543

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.14  E-value=1.2e-05  Score=48.56  Aligned_cols=77  Identities=19%  Similarity=0.184  Sum_probs=52.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .|.+++|+|+++++|...++.....|++|+++.+++++.+.    +++.+       ... .  .|.. +++    +.++
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~----l~~~G-------a~~-v--i~~~-~~~----~~~~   85 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM----LSRLG-------VEY-V--GDSR-SVD----FADE   85 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH----HHTTC-------CSE-E--EETT-CST----HHHH
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccccc----ccccc-------ccc-c--ccCC-ccC----HHHH
Confidence            37899999999999999999888899999999887765433    33333       121 1  2332 322    2233


Q ss_pred             HHHHc--CCccEEEeCCc
Q 033624           96 AWEAF--GRVDALVNNAG  111 (115)
Q Consensus        96 ~~~~~--~~id~li~naG  111 (115)
                      +.+..  ..+|++|.++|
T Consensus        86 v~~~t~~~g~d~v~d~~g  103 (183)
T d1pqwa_          86 ILELTDGYGVDVVLNSLA  103 (183)
T ss_dssp             HHHHTTTCCEEEEEECCC
T ss_pred             HHHHhCCCCEEEEEeccc
Confidence            33332  36999999987

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.12  E-value=7.4e-06  Score=48.89  Aligned_cols=44  Identities=23%  Similarity=0.329  Sum_probs=38.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHh
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~   61 (115)
                      +|.++|.|+ |.+|..+|+.|.++|++|++++|+.+..+++.+.+
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~   45 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV   45 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc
Confidence            678999887 99999999999999999999999999887765543

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=98.11  E-value=5.3e-06  Score=43.71  Aligned_cols=43  Identities=33%  Similarity=0.415  Sum_probs=37.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      ++.+++|+|+++|+|....+.+...|++|+.+.+++++.+.+.
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~   73 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence            4788999999999999999988889999999999988776543

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.03  E-value=2.7e-05  Score=46.67  Aligned_cols=43  Identities=28%  Similarity=0.317  Sum_probs=37.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      .|.+++|+|+++++|...++.....|++|+.+++++++.+.+.
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~   69 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL   69 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccccccc
Confidence            5889999999999999999988889999999998877665443

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.01  E-value=2e-05  Score=45.26  Aligned_cols=41  Identities=22%  Similarity=0.316  Sum_probs=36.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE   60 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   60 (115)
                      +++|.|+ |.+|+.+++.|.+.|+.|++++.+++..+.+.+.
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~   42 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE   42 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhh
Confidence            5788887 9999999999999999999999999888776554

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=98.00  E-value=4.1e-05  Score=46.16  Aligned_cols=41  Identities=27%  Similarity=0.290  Sum_probs=35.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSL   57 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~   57 (115)
                      .|.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a   69 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA   69 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc
Confidence            4889999987 8999999998888998 799999998877644

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=97.98  E-value=7.4e-06  Score=52.47  Aligned_cols=29  Identities=24%  Similarity=0.441  Sum_probs=26.1

Q ss_pred             EEEecCCChHHHHHHHHHHHhCC-eEEEEe
Q 033624           20 VMVTGASSGLGREFCLDLAKAGC-RIVAAA   48 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~-~v~~~~   48 (115)
                      +|||||+|.||..+++.|+++|+ .|++++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d   31 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVD   31 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEE
Confidence            79999999999999999999997 477765

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.93  E-value=0.00013  Score=45.68  Aligned_cols=79  Identities=15%  Similarity=0.253  Sum_probs=52.2

Q ss_pred             CCCCCcEEEEecCC----------------ChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceE
Q 033624           13 HDLNEKVVMVTGAS----------------SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAV   76 (115)
Q Consensus        13 ~~~~~~~~lvtG~~----------------~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (115)
                      .+|.|+++|||+|.                |-.|.++|+++..+|+.|.++....+.                ..+..+.
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~----------------~~p~~~~   65 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL----------------PTPPFVK   65 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC----------------CCCTTEE
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc----------------Ccccccc
Confidence            46789999998874                568999999999999999988654321                0012233


Q ss_pred             EEEeecCCCHHHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           77 AVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        77 ~~~~di~~~~~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .+..   ....++..   .+...+...|++|.+|++.
T Consensus        66 ~~~~---~t~~~m~~---~~~~~~~~~D~~i~aAAvs   96 (223)
T d1u7za_          66 RVDV---MTALEMEA---AVNASVQQQNIFIGCAAVA   96 (223)
T ss_dssp             EEEC---CSHHHHHH---HHHHHGGGCSEEEECCBCC
T ss_pred             ccee---hhhHHHHH---HHHhhhccceeEeeeechh
Confidence            3333   23333333   3334445679999999875

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=0.00015  Score=43.17  Aligned_cols=80  Identities=20%  Similarity=0.281  Sum_probs=51.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      .|.+++|.|+ |++|...++.+...|+ +|+++++++++++.+. ++   +       .. ..+..+- .+.......+.
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~---G-------a~-~~~~~~~-~~~~~~~~~~~   91 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI---G-------AD-LVLQISK-ESPQEIARKVE   91 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT---T-------CS-EEEECSS-CCHHHHHHHHH
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-Hh---C-------Cc-ccccccc-ccccccccccc
Confidence            4778999986 9999999999989999 6999999988776543 33   1       11 1222222 23333333222


Q ss_pred             HHHHHc-CCccEEEeCCcc
Q 033624           95 KAWEAF-GRVDALVNNAGI  112 (115)
Q Consensus        95 ~~~~~~-~~id~li~naG~  112 (115)
                         ... ..+|++|.++|.
T Consensus        92 ---~~~g~g~Dvvid~~G~  107 (171)
T d1pl8a2          92 ---GQLGCKPEVTIECTGA  107 (171)
T ss_dssp             ---HHHTSCCSEEEECSCC
T ss_pred             ---ccCCCCceEEEeccCC
Confidence               223 368999999874

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.76  E-value=0.00033  Score=41.52  Aligned_cols=44  Identities=20%  Similarity=0.257  Sum_probs=36.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCD   59 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~   59 (115)
                      .+.+++|.|+++++|..+++.+...|+ +|+++++++++.+.+.+
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~   71 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR   71 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH
Confidence            478999999999999999999988886 78888888776654443

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.75  E-value=7.4e-05  Score=44.63  Aligned_cols=46  Identities=20%  Similarity=0.330  Sum_probs=39.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhh
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~   62 (115)
                      .++.++|.|+ ||.+++++..|.+.|+ +|.++.|+.++.+.+.+.+.
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~   62 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYG   62 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHT
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhh
Confidence            4678999988 8999999999999997 68899999988887776653

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.74  E-value=0.00019  Score=43.08  Aligned_cols=43  Identities=19%  Similarity=0.122  Sum_probs=34.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCD   59 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~   59 (115)
                      .|.+++|.|+ |++|...++.+...|+ +|+++++++++.+.+.+
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~   70 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKF   70 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHH
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHh
Confidence            4778999976 8999999998888998 68889988877665443

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.73  E-value=0.0002  Score=42.58  Aligned_cols=43  Identities=19%  Similarity=0.183  Sum_probs=36.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      .|.+++|.|+ |++|...++.+...|++|+++++++++.+.+.+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~   69 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK   69 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhc
Confidence            4889999987 899999888888899999999999888775544

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.72  E-value=4.5e-05  Score=46.30  Aligned_cols=78  Identities=22%  Similarity=0.288  Sum_probs=49.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEE-EEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIV-AAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      +.+++|+|++|++|...++.....|++++ .++.+.++...+.+++-.          . ..  .|.. ++ +....+.+
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~ga----------d-~v--i~~~-~~-~~~~~~~~   95 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGF----------D-AA--VNYK-TG-NVAEQLRE   95 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCC----------S-EE--EETT-SS-CHHHHHHH
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccc----------e-EE--eecc-ch-hHHHHHHH
Confidence            47899999999999998888777898755 456666666555555421          1 12  2332 22 22222333


Q ss_pred             HHHHcCCccEEEeCCc
Q 033624           96 AWEAFGRVDALVNNAG  111 (115)
Q Consensus        96 ~~~~~~~id~li~naG  111 (115)
                      +.  ...+|+++.+.|
T Consensus        96 ~~--~~GvDvv~D~vG  109 (187)
T d1vj1a2          96 AC--PGGVDVYFDNVG  109 (187)
T ss_dssp             HC--TTCEEEEEESSC
T ss_pred             Hh--ccCceEEEecCC
Confidence            22  236999999886

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.71  E-value=0.00021  Score=42.71  Aligned_cols=77  Identities=18%  Similarity=0.170  Sum_probs=48.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEE-EEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIV-AAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      .|.+++|.|+ |++|...++.+...|++++ ++++++.+++.+. ++-          . ..++  |.. +++ .   .+
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~G----------a-~~~i--~~~-~~~-~---~~   87 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QLG----------A-THVI--NSK-TQD-P---VA   87 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HHT----------C-SEEE--ETT-TSC-H---HH
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-HcC----------C-eEEE--eCC-CcC-H---HH
Confidence            4888999987 8999999998888898755 5566666555443 331          1 1222  332 222 1   22


Q ss_pred             HHHHH-cCCccEEEeCCcc
Q 033624           95 KAWEA-FGRVDALVNNAGI  112 (115)
Q Consensus        95 ~~~~~-~~~id~li~naG~  112 (115)
                      ++.+. .+.+|++|.++|.
T Consensus        88 ~i~~~t~gg~D~vid~~G~  106 (174)
T d1f8fa2          88 AIKEITDGGVNFALESTGS  106 (174)
T ss_dssp             HHHHHTTSCEEEEEECSCC
T ss_pred             HHHHHcCCCCcEEEEcCCc
Confidence            33222 2479999999874

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.69  E-value=5.2e-05  Score=45.42  Aligned_cols=44  Identities=30%  Similarity=0.369  Sum_probs=37.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      .+.++||+|++||+|...++.....|++|+.+.+++++.+.+.+
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~   66 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ   66 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh
Confidence            35679999999999999998888889999999999888766544

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.67  E-value=0.00029  Score=39.18  Aligned_cols=40  Identities=18%  Similarity=0.291  Sum_probs=34.9

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   52 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~   52 (115)
                      +.++.||+++|.|+ |.+|.+-++.|++.|++|++++....
T Consensus         7 ~l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           7 FCQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             EECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EEEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            34788999999999 77999999999999999999876554

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.67  E-value=0.00034  Score=40.74  Aligned_cols=40  Identities=20%  Similarity=0.233  Sum_probs=34.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK   55 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   55 (115)
                      .-+++.|.|+.|-+|.++++.|.+.|++|.+.+++.....
T Consensus         8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~   47 (152)
T d2pv7a2           8 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVA   47 (152)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGH
T ss_pred             CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccccc
Confidence            3568999999999999999999999999999999865443

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.66  E-value=0.00028  Score=41.64  Aligned_cols=88  Identities=11%  Similarity=0.133  Sum_probs=56.2

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCC---CCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKP---GMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +.|.|. |-+|.++|+.|.+.|++|++.+|+++..+++.+.-...   .....-....+.++.    .++..++.+++++
T Consensus         3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIila----vp~~~~~~vl~~l   77 (165)
T d2f1ka2           3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLC----TPIQLILPTLEKL   77 (165)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEEC----SCHHHHHHHHHHH
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeeccccccccccccc----CcHhhhhhhhhhh
Confidence            566666 99999999999999999999999987766544321100   000000122333322    3577888889888


Q ss_pred             HHHcCCccEEEeCCcc
Q 033624           97 WEAFGRVDALVNNAGI  112 (115)
Q Consensus        97 ~~~~~~id~li~naG~  112 (115)
                      .....+=.++++.+++
T Consensus        78 ~~~l~~~~iv~~~~s~   93 (165)
T d2f1ka2          78 IPHLSPTAIVTDVASV   93 (165)
T ss_dssp             GGGSCTTCEEEECCSC
T ss_pred             hhhcccccceeecccc
Confidence            7666655666666544

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.66  E-value=7.2e-05  Score=45.18  Aligned_cols=43  Identities=33%  Similarity=0.414  Sum_probs=37.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      +.+++|+|++||+|...++.....|++|+.+++++++.+.+.+
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~   74 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKS   74 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHh
Confidence            4589999999999999998888899999999999888765543

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.65  E-value=0.00052  Score=40.61  Aligned_cols=75  Identities=16%  Similarity=0.176  Sum_probs=50.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .|.+++|.|+ |++|...++.+...|+++++++++.++.+. .+.+-          .. .+  .|.. ++...      
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~-a~~lG----------ad-~~--i~~~-~~~~~------   87 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA-AKALG----------AD-EV--VNSR-NADEM------   87 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHT----------CS-EE--EETT-CHHHH------
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHH-HhccC----------Cc-EE--EECc-hhhHH------
Confidence            4889999986 899999998888899999999988887654 33442          11 12  3442 33211      


Q ss_pred             HHHHcCCccEEEeCCccC
Q 033624           96 AWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~  113 (115)
                       ......+|++|.++|..
T Consensus        88 -~~~~~~~D~vid~~g~~  104 (168)
T d1uufa2          88 -AAHLKSFDFILNTVAAP  104 (168)
T ss_dssp             -HTTTTCEEEEEECCSSC
T ss_pred             -HHhcCCCceeeeeeecc
Confidence             12235799999998753

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.62  E-value=0.00049  Score=40.54  Aligned_cols=42  Identities=19%  Similarity=0.190  Sum_probs=35.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      .|.+++|.|+ +++|...++.+...|++|+++++++++++.+.
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~   68 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR   68 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh
Confidence            4788999886 99999999888888999999999988776543

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.61  E-value=5.8e-05  Score=45.60  Aligned_cols=44  Identities=30%  Similarity=0.332  Sum_probs=38.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      .|.++||+|++||+|...++.....|++|+.+.+++++.+.+.+
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~   74 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV   74 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh
Confidence            47899999999999999988888899999999999888765443

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.57  E-value=7.7e-05  Score=42.66  Aligned_cols=39  Identities=18%  Similarity=0.354  Sum_probs=33.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      |.++|.|. |-+|+.+++.|.+.|..|++++.+++..+.+
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~   39 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY   39 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHH
Confidence            45778877 8899999999999999999999998776654

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.48  E-value=0.00068  Score=40.32  Aligned_cols=43  Identities=21%  Similarity=0.346  Sum_probs=35.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCD   59 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~   59 (115)
                      .|.+++|.|+ +|+|...+..+...|+ +|+++++++++.+...+
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~   71 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE   71 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH
Confidence            4889999999 7899999999999886 78888888888765443

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.47  E-value=0.00068  Score=39.46  Aligned_cols=60  Identities=17%  Similarity=0.113  Sum_probs=44.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATI   89 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~   89 (115)
                      +++|.|. +.+|..+++.|.+.|..|++++.+++......+.....         .+.++..|.+ +++.+
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~---------~~~vi~Gd~~-d~~~L   64 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGD---------NADVIPGDSN-DSSVL   64 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCT---------TCEEEESCTT-SHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcC---------CcEEEEccCc-chHHH
Confidence            5788888 78999999999999999999998887666555555432         2456667764 55433

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.46  E-value=0.00012  Score=39.39  Aligned_cols=38  Identities=18%  Similarity=0.136  Sum_probs=33.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   52 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~   52 (115)
                      ++.+|+++|.|. +.-|.++|+.|.++|++|++.+.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            567999999998 66799999999999999999987643

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.45  E-value=0.00095  Score=39.91  Aligned_cols=44  Identities=20%  Similarity=0.332  Sum_probs=37.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDE   60 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~   60 (115)
                      .|.+++|.|+ ||+|...++.+...|+ +|+++++++++++.+.+.
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~   73 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV   73 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHH
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhc
Confidence            4889999986 9999999999999995 799999999988755543

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.44  E-value=5.4e-05  Score=44.34  Aligned_cols=38  Identities=21%  Similarity=0.469  Sum_probs=34.1

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      .+.++||+++|+|| |.+|..-++.|++.|++|.+++..
T Consensus         8 ~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           8 AHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             EECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             heeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            45789999999999 779999999999999999998754

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=0.00026  Score=43.13  Aligned_cols=41  Identities=24%  Similarity=0.225  Sum_probs=35.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      +++.|.|+ |-+|..+|..++..|+.|++++++++.+++..+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~   45 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKK   45 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHh
Confidence            67888988 889999999999999999999999876654443

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.35  E-value=0.00077  Score=39.93  Aligned_cols=44  Identities=23%  Similarity=0.354  Sum_probs=33.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCe-EEEEecccchHHHHHHHh
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~~   61 (115)
                      .|.+++|.|+ +|+|...++.+...|+. |+++++++++.+. .+++
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~-ak~l   72 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFAR-AKEF   72 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH-HHHH
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHH-HHHh
Confidence            4889999987 69999999999889975 6666677766654 4444

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.31  E-value=0.00037  Score=41.49  Aligned_cols=43  Identities=28%  Similarity=0.329  Sum_probs=37.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE   60 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   60 (115)
                      .|++-|.|+ |.+|..+|..|+++|++|.+++|+++..+...+.
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~   43 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDR   43 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc
Confidence            367889998 8999999999999999999999998877765543

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=97.29  E-value=0.00049  Score=41.11  Aligned_cols=43  Identities=21%  Similarity=0.337  Sum_probs=36.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCD   59 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~   59 (115)
                      .|.+++|.|+ +++|...++.+...|+ +|+++++++++++...+
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~   70 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE   70 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH
Confidence            4889999986 8999999999999997 58888898888765543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.27  E-value=0.0024  Score=37.94  Aligned_cols=92  Identities=16%  Similarity=0.249  Sum_probs=57.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCC-CCCC-------ccceEEEEeecCCCHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMV-GSPD-------SVRAVAVELDVCADGATIE   90 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~di~~~~~~~~   90 (115)
                      .+-|.|- |-+|..+|+.|++.|++|++++|++++.+++.+.-...... ....       ......+...+. +...+.
T Consensus         4 nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~-~~~~v~   81 (176)
T d2pgda2           4 DIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVK-AGQAVD   81 (176)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSC-TTHHHH
T ss_pred             cEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecC-chHHHH
Confidence            4566776 88999999999999999999999998887765432111000 0000       001112223332 456677


Q ss_pred             HHHHHHHHHcCCccEEEeCCcc
Q 033624           91 ISVQKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~  112 (115)
                      .+.+.+.....+=+++|.+..+
T Consensus        82 ~v~~~l~~~~~~g~iiid~sT~  103 (176)
T d2pgda2          82 NFIEKLVPLLDIGDIIIDGGNS  103 (176)
T ss_dssp             HHHHHHHHHCCTTCEEEECSCC
T ss_pred             HHHHHHHhccccCcEEEecCcc
Confidence            7777777666666777776543

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.27  E-value=0.0018  Score=38.21  Aligned_cols=57  Identities=16%  Similarity=0.303  Sum_probs=42.5

Q ss_pred             cccccCCCCCCCCcEEEEecCCChHHHHHHHHHHHhCC--eEEEEecccchHHHHHHHhh
Q 033624            5 VSDHLEPWHDLNEKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus         5 ~~~~~~~~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~   62 (115)
                      +...+.+...+...++.|+|+ |.+|..+|..|+.+|.  .+++++++++........+.
T Consensus         7 l~~~~~~~~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~   65 (159)
T d2ldxa1           7 LIQNLVPEDKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQ   65 (159)
T ss_dssp             HEEECSSCCCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHH
T ss_pred             HHhhhcccccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHh
Confidence            344445555566678888896 9999999999998875  69999998877655555554

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.24  E-value=0.00034  Score=41.90  Aligned_cols=47  Identities=32%  Similarity=0.584  Sum_probs=40.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhh
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~   62 (115)
                      ++.++.++|.|+ ||.+++++..|.+.| +|.+..|+.++.+++.+.+.
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~   61 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIA   61 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHH
Confidence            578999999988 788999999997766 89999999998888776665

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=97.09  E-value=0.0018  Score=38.29  Aligned_cols=42  Identities=21%  Similarity=0.207  Sum_probs=32.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLC   58 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~   58 (115)
                      .|.+++|.|+ |++|...++.+...|+ +|+++++++++++.+.
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~   74 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE   74 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh
Confidence            4788999886 9999999998888887 5666777776655433

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.07  E-value=0.0031  Score=36.81  Aligned_cols=42  Identities=21%  Similarity=0.207  Sum_probs=34.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      .|.+++|.|+ |++|...++.+...|++|+++++++++.+...
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k   68 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK   68 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhh
Confidence            4788999875 99999988888889999999998887766443

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.07  E-value=0.0067  Score=35.14  Aligned_cols=47  Identities=21%  Similarity=0.250  Sum_probs=37.0

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCC--eEEEEecccchHHHHHHHhh
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~   62 (115)
                      ..++++.|+|+ |.+|..++..|+.++.  ++++++++++..+.....+.
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~   52 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFN   52 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHH
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHh
Confidence            34778999996 9999999999999875  69999998876555444444

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=97.06  E-value=0.00048  Score=41.68  Aligned_cols=41  Identities=20%  Similarity=0.174  Sum_probs=34.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      +++.|.|+ |-+|..+|..++..|++|++.+++++.+++..+
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~   45 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLA   45 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhh
Confidence            45788888 789999999999999999999999876655433

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.05  E-value=0.0008  Score=39.57  Aligned_cols=39  Identities=23%  Similarity=0.378  Sum_probs=32.1

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHH
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   59 (115)
                      +-|.|. |-+|..+|+.|++.|++|++.+|+++..+.+.+
T Consensus         3 IgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~   41 (161)
T d1vpda2           3 VGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA   41 (161)
T ss_dssp             EEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             EEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH
Confidence            445555 889999999999999999999999887766543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=97.04  E-value=0.0031  Score=37.53  Aligned_cols=42  Identities=17%  Similarity=0.159  Sum_probs=34.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCe-EEEEecccchHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLC   58 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~   58 (115)
                      .|.+++|.|+ |++|...++.+...|++ |+++++++++++-..
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~   70 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK   70 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHH
Confidence            4789999975 99999999999999985 777888887765433

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.04  E-value=0.0045  Score=35.86  Aligned_cols=46  Identities=22%  Similarity=0.382  Sum_probs=36.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhC--CeEEEEecccchHHHHHHHhh
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~   62 (115)
                      ..+++.|.|+ |.+|..+|..|+.+|  ..|++++++++..+.....++
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~   51 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLE   51 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHh
Confidence            3567888996 999999999999988  479999998876654444444

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.00  E-value=0.0067  Score=35.48  Aligned_cols=92  Identities=13%  Similarity=0.122  Sum_probs=56.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCC--eEEEEecccchHHHHHHHhhCCC--CCCCC-CccceEEEEeecCCCHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINKPG--MVGSP-DSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      +++.|.|. |-||.++|+.|.+.|+  +|++++++++..+.+.+.-....  ..... .....-.+-..  .++..+..+
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila--~p~~~~~~v   78 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS--SPVRTFREI   78 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC--SCHHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhcccccccccc--CCchhhhhh
Confidence            35788876 9999999999999986  67888998877766554321000  00000 00011111122  367788888


Q ss_pred             HHHHHHHcCCccEEEeCCcc
Q 033624           93 VQKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        93 ~~~~~~~~~~id~li~naG~  112 (115)
                      ++++.....+=.+++..+++
T Consensus        79 l~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          79 AKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhccccccccccccccc
Confidence            88887766655566665543

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.91  E-value=0.0023  Score=37.54  Aligned_cols=39  Identities=18%  Similarity=0.236  Sum_probs=31.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      ++-+.|- |-+|.++|++|++.|++|.+.+|+.+..+.+.
T Consensus         3 kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~   41 (162)
T d3cuma2           3 QIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV   41 (162)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred             EEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhhhh
Confidence            3555655 88999999999999999999999987765543

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.90  E-value=0.0025  Score=38.64  Aligned_cols=42  Identities=19%  Similarity=0.190  Sum_probs=33.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLC   58 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~   58 (115)
                      .|.+++|.|+ +++|...+......|+ +|+++++++++++.+.
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~   67 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK   67 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh
Confidence            4889999986 8999888888777787 6888888877665433

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.81  E-value=0.0023  Score=37.91  Aligned_cols=40  Identities=20%  Similarity=0.267  Sum_probs=35.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR   53 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   53 (115)
                      ..+.||+++|.|- |.+|+.+|+.+...|++|++++.++-.
T Consensus        20 ~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          20 VMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             ceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccch
Confidence            3578999999988 689999999999999999999988743

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.79  E-value=0.0023  Score=39.18  Aligned_cols=44  Identities=23%  Similarity=0.376  Sum_probs=37.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      .++.|+++.|-|. |.+|..+++.|.+.|++|++.+.+.......
T Consensus        23 ~~L~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~   66 (201)
T d1c1da1          23 GSLDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTERVAHA   66 (201)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence            3688999999875 8899999999999999999999887665543

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=96.75  E-value=0.002  Score=39.63  Aligned_cols=34  Identities=32%  Similarity=0.408  Sum_probs=29.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      ..++++|.|+ |-.|.++|.+|+++|++|.++.|+
T Consensus         5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence            3567899988 788999999999999999999874

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=96.69  E-value=0.0013  Score=41.24  Aligned_cols=48  Identities=19%  Similarity=0.347  Sum_probs=40.7

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHh
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~   61 (115)
                      .++.|++++|-|- |-+|..+|+.|.+.|++|++++.+...........
T Consensus        35 ~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~   82 (230)
T d1leha1          35 DSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE   82 (230)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc
Confidence            4578999999887 88999999999999999999998887776665543

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.64  E-value=0.0036  Score=37.19  Aligned_cols=45  Identities=29%  Similarity=0.403  Sum_probs=38.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLC   58 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   58 (115)
                      ++.||.++|.|.+.-+|+.++..|.++|++|.++......+.+..
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~~   78 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHV   78 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHH
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHHH
Confidence            578999999999999999999999999999998876655554444

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.0032  Score=37.52  Aligned_cols=43  Identities=14%  Similarity=0.163  Sum_probs=37.8

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      ++.||.++|.|.+.-+|+.++..|+++|++|.++......+.+
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~   78 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDE   78 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHH
Confidence            5789999999999999999999999999999998876655543

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=96.53  E-value=0.0024  Score=37.15  Aligned_cols=34  Identities=24%  Similarity=0.316  Sum_probs=30.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccch
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR   53 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   53 (115)
                      ++.|.|+ |.+|..++..|++.|++|.+++|+...
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            4788888 999999999999999999999998653

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=96.48  E-value=0.0021  Score=38.89  Aligned_cols=42  Identities=12%  Similarity=0.243  Sum_probs=35.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE   60 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   60 (115)
                      +++.|.|+ |..|.++|..|++.|.+|.+++|+++..+.+...
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~   49 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEK   49 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHH
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhc
Confidence            46888888 7789999999999999999999998877665543

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.46  E-value=0.0042  Score=34.76  Aligned_cols=34  Identities=15%  Similarity=0.317  Sum_probs=30.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      +++++|.|+ |.+|..+|..|.++|.+|.++.+++
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeecc
Confidence            678888888 9999999999999999999998764

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.45  E-value=0.0049  Score=34.49  Aligned_cols=35  Identities=26%  Similarity=0.252  Sum_probs=30.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      .+++++|.|+ |.+|..+|..|++.|.+|.++.+.+
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            4678888877 8999999999999999999987753

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.44  E-value=0.016  Score=33.44  Aligned_cols=33  Identities=33%  Similarity=0.359  Sum_probs=29.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCC--eEEEEeccc
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGC--RIVAAARRV   51 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~~   51 (115)
                      ++.|+|++|.+|..++..|+.++.  +++++++++
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~   36 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREH   36 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchh
Confidence            478999999999999999999884  799999875

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=96.40  E-value=0.0026  Score=39.59  Aligned_cols=33  Identities=24%  Similarity=0.210  Sum_probs=29.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      +|+++|.|+ |.-|...|.+|++.|++|.++.++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAE   33 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            588999988 777999999999999999999764

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.38  E-value=0.015  Score=33.53  Aligned_cols=44  Identities=14%  Similarity=0.188  Sum_probs=34.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCC--eEEEEecccchHHHHHHHhh
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~   62 (115)
                      |++.|+|+ |.+|..++..|+.+|.  ++++++.+++..+.....+.
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~   47 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQ   47 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHH
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhh
Confidence            67888995 8999999999999874  69999998876654444443

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.36  E-value=0.012  Score=34.26  Aligned_cols=46  Identities=13%  Similarity=0.025  Sum_probs=35.0

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHh
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~   61 (115)
                      .+.+++.|.|+ |.+|..++..++.++. ++++++.+++..+.....+
T Consensus         5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl   51 (154)
T d1pzga1           5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDL   51 (154)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHH
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHH
Confidence            34678888997 9999999998888885 7999998876654443333

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.35  E-value=0.0047  Score=34.11  Aligned_cols=34  Identities=21%  Similarity=0.260  Sum_probs=30.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      .+.++|.|+ |.+|..+|..|.+.|.+|.++.|.+
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence            478888888 9999999999999999999998764

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.30  E-value=0.025  Score=33.06  Aligned_cols=43  Identities=21%  Similarity=0.261  Sum_probs=33.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCD   59 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~   59 (115)
                      .|.+++|.|+ +++|...+..+...|+ .|+++++++++++.+.+
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~   71 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV   71 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH
Confidence            4789999986 7788888888888877 58888888888765443

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.30  E-value=0.0077  Score=35.54  Aligned_cols=39  Identities=15%  Similarity=0.252  Sum_probs=35.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR   53 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   53 (115)
                      .+.||+++|.|- |.+|+.+|+++...|++|+++..++-.
T Consensus        20 ~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          20 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             eecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh
Confidence            567999999998 889999999999999999999888743

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=96.21  E-value=0.0069  Score=33.98  Aligned_cols=37  Identities=22%  Similarity=0.231  Sum_probs=28.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSL   57 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   57 (115)
                      |+++|.|. +.+|..+++.|.  +..|+++..+++..+..
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~   37 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKV   37 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHH
Confidence            56888886 788999999984  55677888887766544

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.21  E-value=0.046  Score=32.25  Aligned_cols=75  Identities=21%  Similarity=0.255  Sum_probs=53.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      ...+++|.|+ +-.|+..++...+.|+.|.+.+.+.+.++.+...+..          .+...   . ++.+.+.+.+. 
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~----------~~~~~---~-~~~~~l~~~~~-   94 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS----------RVELL---Y-SNSAEIETAVA-   94 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG----------GSEEE---E-CCHHHHHHHHH-
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc----------cceee---h-hhhhhHHHhhc-
Confidence            4568899988 6778998999999999999999999988877666532          22222   2 24444443333 


Q ss_pred             HHHHcCCccEEEeCCcc
Q 033624           96 AWEAFGRVDALVNNAGI  112 (115)
Q Consensus        96 ~~~~~~~id~li~naG~  112 (115)
                            .-|++|.++=+
T Consensus        95 ------~aDivI~aali  105 (168)
T d1pjca1          95 ------EADLLIGAVLV  105 (168)
T ss_dssp             ------TCSEEEECCCC
T ss_pred             ------cCcEEEEeeec
Confidence                  45999998754

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.20  E-value=0.0088  Score=36.33  Aligned_cols=39  Identities=18%  Similarity=0.346  Sum_probs=34.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   52 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~   52 (115)
                      .++.|+++.|.|. |.||+.+|+.+...|++|+..++...
T Consensus        39 ~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          39 REVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            4577999999998 89999999999999999999887543

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.19  E-value=0.0038  Score=37.04  Aligned_cols=34  Identities=18%  Similarity=0.158  Sum_probs=29.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCe-EEEEeccc
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARRV   51 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~-v~~~~r~~   51 (115)
                      +++++|.|+ |..|...|..|+++|++ |.++.++.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            678999998 88999999999999995 88888764

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=96.17  E-value=0.0052  Score=34.28  Aligned_cols=34  Identities=24%  Similarity=0.343  Sum_probs=30.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      ++.++|.|+ |.+|..+|..|.+.|.+|.++.+.+
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            467888887 9999999999999999999998764

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.17  E-value=0.0051  Score=36.66  Aligned_cols=38  Identities=24%  Similarity=0.283  Sum_probs=34.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      .++.||+++|.|.+.=+|+.++..|+++|+.|..+..+
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            36889999999999999999999999999999877644

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.16  E-value=0.0059  Score=34.21  Aligned_cols=34  Identities=18%  Similarity=0.152  Sum_probs=30.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      .++++|.|+ |.||..+|..|.+.|.+|.++.|+.
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            478888888 7899999999999999999998864

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.14  E-value=0.0087  Score=34.55  Aligned_cols=41  Identities=27%  Similarity=0.383  Sum_probs=34.5

Q ss_pred             EEEecCCChHHHHHHHHHHHhC-CeEEEEecccchHHHHHHHh
Q 033624           20 VMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~   61 (115)
                      +.+.|+ |-+|.++++.|.+.| ++|.+++|++++.+.+.+..
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~   44 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL   44 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc
Confidence            566776 999999999999887 78999999998888777654

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=96.14  E-value=0.0093  Score=35.68  Aligned_cols=37  Identities=22%  Similarity=0.341  Sum_probs=32.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      ....|+++|.|+ |..|...|..|+++|++|.++.+.+
T Consensus        40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            345789999998 8889999999999999999998865

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.14  E-value=0.023  Score=32.48  Aligned_cols=43  Identities=16%  Similarity=0.146  Sum_probs=33.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHhC--CeEEEEecccchHHHHHHHhh
Q 033624           19 VVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~   62 (115)
                      ++.|+|+ |.+|..++..|+..+  .++++++.+++........+.
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~   46 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMY   46 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhh
Confidence            4677886 999999999999887  479999998876654444443

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.13  E-value=0.0064  Score=33.96  Aligned_cols=34  Identities=15%  Similarity=0.243  Sum_probs=30.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      .++++|.|+ |.||..+|..|.+.|.+|.++.+.+
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            468888888 8999999999999999999988754

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=96.11  E-value=0.017  Score=35.54  Aligned_cols=79  Identities=11%  Similarity=0.160  Sum_probs=57.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .+.++|-.|+++|.-.++...++  |.+|+.+.++++-.+.+.+.++..+      -.++.++..|....          
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g------~~nv~~~~gd~~~g----------  139 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAG------VKNVHVILGDGSKG----------  139 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTT------CCSEEEEESCGGGC----------
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcC------CceeEEEECccccC----------
Confidence            47789999998887777666665  5679999999887777777776543      24688888887521          


Q ss_pred             HHHHcCCccEEEeCCccC
Q 033624           96 AWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~~~~~id~li~naG~~  113 (115)
                       ....++.|.++.++++.
T Consensus       140 -~~~~~pfD~Iiv~~a~~  156 (215)
T d1jg1a_         140 -FPPKAPYDVIIVTAGAP  156 (215)
T ss_dssp             -CGGGCCEEEEEECSBBS
T ss_pred             -CcccCcceeEEeecccc
Confidence             13346889998887764

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.09  E-value=0.033  Score=32.22  Aligned_cols=77  Identities=18%  Similarity=0.193  Sum_probs=46.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCC---------eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGC---------RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATI   89 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~---------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~   89 (115)
                      ++.|+|++|.+|..++..|+..+.         +++...++.+..+.....++...      ......+...-  +.   
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~--~~---   74 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA------FPLLAGLEATD--DP---   74 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT------CTTEEEEEEES--CH---
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccc------cccccccccCC--ch---
Confidence            799999999999999999997653         12223344455555555555432      11222222221  11   


Q ss_pred             HHHHHHHHHHcCCccEEEeCCccC
Q 033624           90 EISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        90 ~~~~~~~~~~~~~id~li~naG~~  113 (115)
                             .+.+..-|++|..+|..
T Consensus        75 -------~~~~~~advViitaG~~   91 (154)
T d1y7ta1          75 -------KVAFKDADYALLVGAAP   91 (154)
T ss_dssp             -------HHHTTTCSEEEECCCCC
T ss_pred             -------hhhcccccEEEeecCcC
Confidence                   12234679999999864

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=96.09  E-value=0.011  Score=32.68  Aligned_cols=36  Identities=25%  Similarity=0.230  Sum_probs=31.7

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      ..++.++|.|+ |.+|..+|..|.+.|.+|.++.+.+
T Consensus        20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          20 EPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            34788999988 8999999999999999999998764

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=96.09  E-value=0.0062  Score=34.06  Aligned_cols=34  Identities=21%  Similarity=0.250  Sum_probs=30.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      .+.++|.|+ |.||..+|..|.+.|.+|.++.|++
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence            578888888 9999999999999999999998764

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=96.09  E-value=0.007  Score=33.44  Aligned_cols=34  Identities=21%  Similarity=0.100  Sum_probs=29.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      .++++|.|+ |.+|..+|..|.+.|.+|.++.|.+
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            367888887 8999999999999999999998864

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.07  E-value=0.0052  Score=36.37  Aligned_cols=42  Identities=19%  Similarity=0.349  Sum_probs=34.9

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhh
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~   62 (115)
                      +-|.|- |-+|..+++.|++.|++|.+++|++++.+.+.+...
T Consensus         4 IGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~   45 (178)
T d1pgja2           4 VGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANA   45 (178)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTT
T ss_pred             EEEEee-hHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCC
Confidence            334444 889999999999999999999999998888776643

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.05  E-value=0.01  Score=38.15  Aligned_cols=24  Identities=17%  Similarity=0.126  Sum_probs=21.1

Q ss_pred             ChHHHHHHHHHHHhCCeEEEEecc
Q 033624           27 SGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        27 ~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      |..|.++|+.++.+|+.|+++.+.
T Consensus        46 Gk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          46 GRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             hHHHHHHHHHHHHcCCEEEEEecC
Confidence            567999999999999999988654

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=96.05  E-value=0.009  Score=33.15  Aligned_cols=34  Identities=21%  Similarity=0.171  Sum_probs=30.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      .+.++|.|+ |.||..+|..|++.|.+|.++.+..
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            477899988 9999999999999999999987753

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.04  E-value=0.0081  Score=33.06  Aligned_cols=34  Identities=21%  Similarity=0.365  Sum_probs=29.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      .++++|.|+ |.+|..+|..|.+.|.+|.++.+.+
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            477888877 9999999999999999999988753

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=96.01  E-value=0.015  Score=36.11  Aligned_cols=35  Identities=29%  Similarity=0.396  Sum_probs=30.0

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecc
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   50 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~   50 (115)
                      +.+.+++|.|+ ||+|..++..|++.|. ++.+++.+
T Consensus        28 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          28 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCc
Confidence            55789999996 9999999999999998 67887753

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.99  E-value=0.0063  Score=34.01  Aligned_cols=33  Identities=27%  Similarity=0.214  Sum_probs=29.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      .++++|.|+ |.||..+|..|.+.|.+|.++.|+
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            356888888 999999999999999999988876

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=95.97  E-value=0.06  Score=31.44  Aligned_cols=48  Identities=13%  Similarity=0.223  Sum_probs=37.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC--eEEEEecccchHHHHHHHhh
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~   62 (115)
                      ....+++.|.|+ |.+|..++..|+.+|.  .+++++.+++..+.....+.
T Consensus        17 ~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~   66 (160)
T d1i0za1          17 TVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQ   66 (160)
T ss_dssp             CCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHH
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHh
Confidence            345678889996 9999999999999986  69999998776655444444

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.95  E-value=0.0074  Score=33.47  Aligned_cols=34  Identities=18%  Similarity=0.153  Sum_probs=30.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      .++++|.|+ |.+|..+|..|.+.|.+|.++.|..
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            478888888 8999999999999999999998753

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=95.92  E-value=0.011  Score=34.70  Aligned_cols=46  Identities=15%  Similarity=0.096  Sum_probs=38.9

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhC
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINK   63 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~   63 (115)
                      ..|.++|..|++.|   ..+..|+++|++|+.++.++..++.+.+..+.
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~   64 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGE   64 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCS
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhcc
Confidence            35889999999888   46778999999999999999988887777654

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=95.91  E-value=0.0057  Score=38.13  Aligned_cols=31  Identities=19%  Similarity=0.192  Sum_probs=27.4

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      ++|.|+ |-.|.++|.+|+++|.+|+++++..
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            777877 8889999999999999999998753

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.86  E-value=0.053  Score=32.00  Aligned_cols=33  Identities=21%  Similarity=0.414  Sum_probs=28.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecccc
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   52 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~   52 (115)
                      ++.|.|+ |.+|.++|..|++.|.+|.+++|..+
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            4667777 88999999999999999999998644

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=95.85  E-value=0.0082  Score=37.11  Aligned_cols=60  Identities=12%  Similarity=0.084  Sum_probs=43.7

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecC
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVC   83 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~   83 (115)
                      ...++++|=.|++.|   .++..|++.|.+|+.++.+++.++.+.+.+...+       .++.++..|+.
T Consensus        35 ~~~~~~vLDiGCG~G---~~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~-------~~v~~~~~d~~   94 (246)
T d1y8ca_          35 NLVFDDYLDLACGTG---NLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQG-------LKPRLACQDIS   94 (246)
T ss_dssp             TCCTTEEEEETCTTS---TTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTT-------CCCEEECCCGG
T ss_pred             CCCCCeEEEEeCcCC---HHHHHHHHhCCccEeeccchhhhhhccccccccC-------ccceeeccchh
Confidence            345678999999877   3677888899999999999888777666555432       34556666653

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.85  E-value=0.057  Score=32.55  Aligned_cols=75  Identities=21%  Similarity=0.252  Sum_probs=52.0

Q ss_pred             CCCCCCcEEEEecCCCh-HHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHH
Q 033624           12 WHDLNEKVVMVTGASSG-LGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATI   89 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~g-iG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~   89 (115)
                      ..++.|++++=.|++.| ++.    .++..|+ +|+.++.++...+.+.+.++..+       .+..++..|+. .    
T Consensus        42 ~~dl~g~~vLDlg~GtG~l~i----~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~-------~~~~~~~~d~~-~----  105 (201)
T d1wy7a1          42 LGDIEGKVVADLGAGTGVLSY----GALLLGAKEVICVEVDKEAVDVLIENLGEFK-------GKFKVFIGDVS-E----  105 (201)
T ss_dssp             TTSSTTCEEEEETCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHTGGGT-------TSEEEEESCGG-G----
T ss_pred             cCCCCCCEEEECcCcchHHHH----HHHHcCCCEEEEEcCcHHHHHHHHHHHHHcC-------CCceEEECchh-h----
Confidence            35678999999998666 433    3445675 79999999988887777766543       45666777763 1    


Q ss_pred             HHHHHHHHHHcCCccEEEeCCc
Q 033624           90 EISVQKAWEAFGRVDALVNNAG  111 (115)
Q Consensus        90 ~~~~~~~~~~~~~id~li~naG  111 (115)
                               ..+++|++|.|--
T Consensus       106 ---------~~~~fD~Vi~nPP  118 (201)
T d1wy7a1         106 ---------FNSRVDIVIMNPP  118 (201)
T ss_dssp             ---------CCCCCSEEEECCC
T ss_pred             ---------hCCcCcEEEEcCc
Confidence                     1347888888754

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=95.80  E-value=0.011  Score=36.33  Aligned_cols=35  Identities=26%  Similarity=0.233  Sum_probs=30.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      ..++++|.|+ |--|..+|..|+++|.+|+++.+++
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3567899988 7779999999999999999998764

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.77  E-value=0.017  Score=34.45  Aligned_cols=38  Identities=21%  Similarity=0.223  Sum_probs=34.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      ..+.|+++.|.|. |.||+.+++.+...|.+|+..+++.
T Consensus        38 ~~l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~   75 (181)
T d1qp8a1          38 PLIQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTP   75 (181)
T ss_dssp             CCCTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CcccCceEEEecc-ccccccceeeeeccccccccccccc
Confidence            3578999999998 6799999999999999999998865

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.76  E-value=0.013  Score=33.19  Aligned_cols=35  Identities=17%  Similarity=0.235  Sum_probs=31.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      .+++++|.|+ |.+|..+|..|.+.|.+|.++.+.+
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence            4688999988 9999999999999999999998754

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=95.74  E-value=0.0088  Score=37.71  Aligned_cols=35  Identities=29%  Similarity=0.297  Sum_probs=30.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      ..|+++|+|+ |--|...|.+|++.|.+|.++.++.
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4678999998 6779999999999999999987653

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=95.74  E-value=0.011  Score=34.20  Aligned_cols=34  Identities=15%  Similarity=0.104  Sum_probs=28.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCC--eEEEEeccc
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRV   51 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~~   51 (115)
                      ||+++|.|+ |..|..+|..|.+.+.  +|+++.+++
T Consensus         2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            899999999 8889999999999885  677777654

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=95.72  E-value=0.084  Score=31.21  Aligned_cols=79  Identities=16%  Similarity=0.129  Sum_probs=46.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhC---C----eEEEEeccc--chHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAG---C----RIVAAARRV--DRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGA   87 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g---~----~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~   87 (115)
                      ..++.||||+|.||..++..|++..   .    .+.+.+...  ..++....+++...    ....+. ....   ++. 
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a----~~~~~~-~~~~---~~~-   94 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSL----YPLLRE-VSIG---IDP-   94 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT----CTTEEE-EEEE---SCH-
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccc----cccccC-cccc---ccc-
Confidence            4579999999999999999998753   2    244445443  33444554554322    001111 1112   121 


Q ss_pred             HHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           88 TIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        88 ~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                               .+.+...|++|..+|..
T Consensus        95 ---------~~~~~~aDvVvi~ag~~  111 (175)
T d7mdha1          95 ---------YEVFEDVDWALLIGAKP  111 (175)
T ss_dssp             ---------HHHTTTCSEEEECCCCC
T ss_pred             ---------hhhccCCceEEEeeccC
Confidence                     12345789999998864

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.70  E-value=0.041  Score=33.46  Aligned_cols=80  Identities=13%  Similarity=0.109  Sum_probs=52.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .|.++|-.|++.|.-.....++.....+|+.++.+++..+.+.+.++..+      ..++.++..|....          
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~------~~n~~~~~~d~~~~----------  138 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG------IENVIFVCGDGYYG----------  138 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT------CCSEEEEESCGGGC----------
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhc------ccccccccCchHHc----------
Confidence            47789999987775554444444455689999999888888777776543      13455666665311          


Q ss_pred             HHHHcCCccEEEeCCcc
Q 033624           96 AWEAFGRVDALVNNAGI  112 (115)
Q Consensus        96 ~~~~~~~id~li~naG~  112 (115)
                       ....+++|.++.++++
T Consensus       139 -~~~~~~fD~I~~~~~~  154 (213)
T d1dl5a1         139 -VPEFSPYDVIFVTVGV  154 (213)
T ss_dssp             -CGGGCCEEEEEECSBB
T ss_pred             -cccccchhhhhhhccH
Confidence             1223568988888765

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.69  E-value=0.039  Score=31.67  Aligned_cols=36  Identities=28%  Similarity=0.277  Sum_probs=30.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCC--eEEEEecccchH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRL   54 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~   54 (115)
                      ++.|+|++|.+|..+|..|+.++.  ++++++.++.+.
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~   39 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPG   39 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHH
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccch
Confidence            578999999999999999998875  588889876543

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.69  E-value=0.025  Score=34.70  Aligned_cols=57  Identities=18%  Similarity=0.224  Sum_probs=41.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeec
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDV   82 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di   82 (115)
                      ..+++|=.|++.|   ..+..|+++|++|+.++.+++-+..+.+.+....       .++.++..|+
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~-------~~i~~~~~d~   97 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERN-------LKIEFLQGDV   97 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCCEEEESCG
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeecccccccccccccccc-------ccchheehhh
Confidence            4678999998877   4466788899999999999887777666655432       2455555554

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=95.66  E-value=0.014  Score=32.66  Aligned_cols=34  Identities=15%  Similarity=0.180  Sum_probs=30.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      .+.++|.|+ |.||..+|..|.+.|.+|.++.+.+
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            578899988 9999999999999999999997754

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.53  E-value=0.016  Score=34.96  Aligned_cols=39  Identities=10%  Similarity=0.169  Sum_probs=34.7

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      ..++.|+++.|.|. |.||+.+++.+...|++|+..++..
T Consensus        44 ~~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   82 (193)
T d1mx3a1          44 AARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYL   82 (193)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTS
T ss_pred             ceeeeCceEEEecc-ccccccceeeeeccccceeeccCcc
Confidence            35688999999987 9999999999999999999998754

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=95.53  E-value=0.015  Score=35.74  Aligned_cols=36  Identities=22%  Similarity=0.275  Sum_probs=31.5

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      ...+.++|.|+ |..|...|..|+++|+.|.++.++.
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            35789999998 7889999999999999999998754

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=95.50  E-value=0.022  Score=32.74  Aligned_cols=35  Identities=17%  Similarity=0.171  Sum_probs=28.6

Q ss_pred             CcEEEEe-cCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           17 EKVVMVT-GASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        17 ~~~~lvt-G~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      ++.++|. .+++.||..+|..|+++|.+|.++.+.+
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            5555555 3558899999999999999999998764

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.49  E-value=0.038  Score=33.01  Aligned_cols=38  Identities=11%  Similarity=0.098  Sum_probs=33.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      .++.++++.|.|. |.||+.+++.+...|.+|+..++..
T Consensus        40 ~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          40 FEARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccceEEEEeec-ccchhhhhhhcccccceEeeccccc
Confidence            4578999999976 9999999999999999999998753

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.48  E-value=0.016  Score=33.45  Aligned_cols=42  Identities=10%  Similarity=0.313  Sum_probs=34.6

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhh
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~   62 (115)
                      +-+.|+ |-+|.++++.|.+.|+++++..|+.++.+++.+.+.
T Consensus         3 Ig~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g   44 (152)
T d2ahra2           3 IGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLA   44 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHT
T ss_pred             EEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccc
Confidence            455555 899999999999999999999999888777666553

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.44  E-value=0.013  Score=35.58  Aligned_cols=38  Identities=18%  Similarity=0.255  Sum_probs=33.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      .++.++++.|.|. |.||+.+++.+...|.+|+..++..
T Consensus        41 ~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   78 (199)
T d1dxya1          41 KELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYP   78 (199)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccceeeeeeec-ccccccccccccccceeeeccCCcc
Confidence            4677899999988 8999999999999999999998754

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=95.42  E-value=0.011  Score=36.90  Aligned_cols=30  Identities=30%  Similarity=0.424  Sum_probs=26.4

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      ++|.|+ |-.|.++|.+|+++|.+|+++.+.
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            677777 788999999999999999999864

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=95.33  E-value=0.059  Score=33.77  Aligned_cols=48  Identities=17%  Similarity=0.199  Sum_probs=37.1

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCC
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPG   65 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~   65 (115)
                      ..|++++=.|+++|+   ++..+++.|++|+.++.++...+.+.+..+..+
T Consensus       119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~  166 (254)
T d2nxca1         119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNG  166 (254)
T ss_dssp             CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTT
T ss_pred             CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcC
Confidence            458899999998885   234566789999999999998888777666443

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=95.30  E-value=0.075  Score=30.27  Aligned_cols=45  Identities=18%  Similarity=0.170  Sum_probs=32.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCC--eEEEEecccchHHHHHHHhhC
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEINK   63 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~   63 (115)
                      +++.|+|+ |.+|..++..++..+.  .+++++++++..+.....+..
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~   48 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINH   48 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTT
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeecc
Confidence            35677786 9999999999998875  699999888765444445543

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=95.26  E-value=0.018  Score=37.17  Aligned_cols=34  Identities=24%  Similarity=0.306  Sum_probs=29.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      .|.++|.|| |--|..+|..|++.|.+|.++..+.
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence            578999988 6778999999999999999987654

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.26  E-value=0.091  Score=28.68  Aligned_cols=36  Identities=28%  Similarity=0.549  Sum_probs=30.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   52 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~   52 (115)
                      .+.++.|.|+ |-+|+.++....+.|+++++.+.++.
T Consensus        10 ~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~   45 (111)
T d1kjqa2          10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYAD   45 (111)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred             CCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            3567999986 78999999999999999999987654

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=95.24  E-value=0.063  Score=32.23  Aligned_cols=80  Identities=15%  Similarity=0.266  Sum_probs=57.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +..+=+|-|+||....+.+.+ . +.+|+.++++++.+..+.+.++...       .++.++..+.. +       +..+
T Consensus        25 ~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~-------~r~~~~~~~f~-~-------~~~~   87 (192)
T d1m6ya2          25 KIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFS-------DRVSLFKVSYR-E-------ADFL   87 (192)
T ss_dssp             CEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGT-------TTEEEEECCGG-G-------HHHH
T ss_pred             CEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhcccc-------ccccchhHHHh-h-------HHHH
Confidence            445556778888888877765 3 5689999999999988888776532       57888888774 3       2222


Q ss_pred             HHH--cCCccEEEeCCccC
Q 033624           97 WEA--FGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~--~~~id~li~naG~~  113 (115)
                      ...  .+++|.++...|++
T Consensus        88 ~~~~~~~~vdgIl~DlGvS  106 (192)
T d1m6ya2          88 LKTLGIEKVDGILMDLGVS  106 (192)
T ss_dssp             HHHTTCSCEEEEEEECSCC
T ss_pred             HHHcCCCCcceeeeccchh
Confidence            233  35899998888874

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.20  E-value=0.015  Score=34.76  Aligned_cols=31  Identities=16%  Similarity=0.128  Sum_probs=26.7

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      ++|.|+ |--|..+|..|++.|.+|.++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            678876 6678999999999999999998764

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=95.16  E-value=0.0076  Score=36.19  Aligned_cols=31  Identities=26%  Similarity=0.369  Sum_probs=26.2

Q ss_pred             cEEEEecCCChHHHH-----HHHHHHHhCCeEEEEe
Q 033624           18 KVVMVTGASSGLGRE-----FCLDLAKAGCRIVAAA   48 (115)
Q Consensus        18 ~~~lvtG~~~giG~~-----~a~~l~~~g~~v~~~~   48 (115)
                      |+++|||.+.|.|+.     +|+.|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            689999998788774     6678889999999886

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=95.16  E-value=0.083  Score=32.48  Aligned_cols=75  Identities=13%  Similarity=0.001  Sum_probs=51.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .|.++|-.|+++|.-.   ..|++.+.+|+.+..+++..+.+.+.+...        .++.++..|....          
T Consensus        70 ~g~~VLdIG~GsGy~t---a~La~l~~~V~aiE~~~~~~~~A~~~~~~~--------~nv~~~~~d~~~g----------  128 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYT---ALIAEIVDKVVSVEINEKMYNYASKLLSYY--------NNIKLILGDGTLG----------  128 (224)
T ss_dssp             TTCEEEEECCTTSHHH---HHHHHHSSEEEEEESCHHHHHHHHHHHTTC--------SSEEEEESCGGGC----------
T ss_pred             ccceEEEecCCCCHHH---HHHHHHhcccccccccHHHHHHHHHHHhcc--------cccccccCchhhc----------
Confidence            4778999999877433   345666789999999888777766655432        3577777776421          


Q ss_pred             HHHHcCCccEEEeCCcc
Q 033624           96 AWEAFGRVDALVNNAGI  112 (115)
Q Consensus        96 ~~~~~~~id~li~naG~  112 (115)
                       ....++.|.++.++++
T Consensus       129 -~~~~~pfD~Iiv~~a~  144 (224)
T d1vbfa_         129 -YEEEKPYDRVVVWATA  144 (224)
T ss_dssp             -CGGGCCEEEEEESSBB
T ss_pred             -chhhhhHHHHHhhcch
Confidence             1224678999888775

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=95.13  E-value=0.015  Score=36.69  Aligned_cols=31  Identities=19%  Similarity=0.356  Sum_probs=26.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCC-eEEEEecc
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   50 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~   50 (115)
                      .++|.|+ |-+|.++|.+|+++|. +|++++++
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            3788887 7899999999999997 59998875

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.13  E-value=0.099  Score=29.64  Aligned_cols=42  Identities=14%  Similarity=0.197  Sum_probs=31.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCC--eEEEEecccchHHHHHHHh
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~   61 (115)
                      ++.|.|+ |.+|..++..++.++.  ++++++.+++..+.....+
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl   45 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDL   45 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccc
Confidence            4667786 8999999999998874  6999999876655444333

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.02  E-value=0.023  Score=34.21  Aligned_cols=36  Identities=11%  Similarity=0.182  Sum_probs=29.4

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      +.|.|. |.+|..+|..|++.|++|++++.+.+..+.
T Consensus         3 I~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~~~i~~   38 (202)
T d1mv8a2           3 ISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKIDL   38 (202)
T ss_dssp             EEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             EEEECC-CHhHHHHHHHHHhCCCcEEEEeCCHHHHHH
Confidence            455654 999999999999999999999987655443

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.98  E-value=0.04  Score=32.82  Aligned_cols=40  Identities=25%  Similarity=0.284  Sum_probs=34.4

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccch
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR   53 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   53 (115)
                      ..+.++++.|.|. |.||+.+++.+...|.+|+..++....
T Consensus        40 ~~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          40 TEIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             ccccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCCh
Confidence            4577999999986 999999999999999999999876543

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.93  E-value=0.086  Score=31.78  Aligned_cols=70  Identities=16%  Similarity=0.217  Sum_probs=46.6

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .++.|++++=.|++.|+   ++..++..|+ +|+.++.++...+.+.+.+           .++.++.+|+. +      
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~-----------~~~~~~~~D~~-~------  103 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC-----------GGVNFMVADVS-E------  103 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC-----------TTSEEEECCGG-G------
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc-----------ccccEEEEehh-h------
Confidence            46789999999987772   2334566776 5999998887776555543           23556777764 1      


Q ss_pred             HHHHHHHHcCCccEEEeCC
Q 033624           92 SVQKAWEAFGRVDALVNNA  110 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~na  110 (115)
                             -.+++|++|.|-
T Consensus       104 -------l~~~fD~Vi~NP  115 (197)
T d1ne2a_         104 -------ISGKYDTWIMNP  115 (197)
T ss_dssp             -------CCCCEEEEEECC
T ss_pred             -------cCCcceEEEeCc
Confidence                   124678877773

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.92  E-value=0.1  Score=30.94  Aligned_cols=45  Identities=18%  Similarity=0.155  Sum_probs=34.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhC
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINK   63 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~   63 (115)
                      .+..+|=.|++.|   ..+..|+++|++|+.++.+++.++.+......
T Consensus        30 ~~grvLDiGcG~G---~~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~   74 (198)
T d2i6ga1          30 APGRTLDLGCGNG---RNSLYLAANGYDVTAWDKNPASMANLERIKAA   74 (198)
T ss_dssp             CSCEEEEETCTTS---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCcEEEECCCCC---HHHHHHHHHhhhhccccCcHHHHHHHHHHhhh
Confidence            3457888998766   35678889999999999998887766555543

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.88  E-value=0.15  Score=29.12  Aligned_cols=44  Identities=20%  Similarity=0.301  Sum_probs=31.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHh---CCeEEEEecccchHHHHHHHhhC
Q 033624           19 VVMVTGASSGLGREFCLDLAKA---GCRIVAAARRVDRLKSLCDEINK   63 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~---g~~v~~~~r~~~~~~~~~~~~~~   63 (115)
                      ++.|+|++|.+|..++..|+.+   ...+.+.+..+. .+.....+..
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~-~~g~a~Dl~h   48 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV-TPGVAVDLSH   48 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTT-HHHHHHHHHT
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccccc-chhHHHHHHC
Confidence            5789999999999999988754   357899987643 3333344443

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.87  E-value=0.043  Score=32.84  Aligned_cols=44  Identities=16%  Similarity=0.179  Sum_probs=34.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhC
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINK   63 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~   63 (115)
                      +.++|=.|++.|.   ++..|++.|++|+.++.+++.++.+.+....
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~   81 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKS   81 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcc
Confidence            4578899998873   5667888999999999998877776665543

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=94.84  E-value=0.16  Score=29.81  Aligned_cols=77  Identities=19%  Similarity=0.217  Sum_probs=50.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .+.+++=.|++.|   .++..+++.+.+|+.++.++..++.+.+.++..+     -..++.++.+|..           +
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~g-----l~~~v~~~~gda~-----------~   93 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHG-----LGDNVTLMEGDAP-----------E   93 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTT-----CCTTEEEEESCHH-----------H
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcC-----CCcceEEEECchh-----------h
Confidence            4777888888766   3334566778899999999998888888777543     1135777777642           1


Q ss_pred             HHHHcCCccEEEeCCc
Q 033624           96 AWEAFGRVDALVNNAG  111 (115)
Q Consensus        96 ~~~~~~~id~li~naG  111 (115)
                      .......+|.++.+.+
T Consensus        94 ~~~~~~~~D~v~~~~~  109 (186)
T d1l3ia_          94 ALCKIPDIDIAVVGGS  109 (186)
T ss_dssp             HHTTSCCEEEEEESCC
T ss_pred             cccccCCcCEEEEeCc
Confidence            1223456777776643

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.78  E-value=0.026  Score=34.51  Aligned_cols=44  Identities=14%  Similarity=0.021  Sum_probs=37.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhh
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~   62 (115)
                      .+.++|..|++.|   ..+..|+++|++|+.++.++..++.+.+...
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~   88 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQN   88 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhh
Confidence            5779999999887   5688899999999999999988877766554

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=94.65  E-value=0.073  Score=31.69  Aligned_cols=39  Identities=21%  Similarity=0.107  Sum_probs=34.3

Q ss_pred             CCCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           12 WHDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        12 ~~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      ..++.++++.|.|. |.||+.+++.+...|.+|...++..
T Consensus        39 ~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          39 AYDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             ceeccccceeeccc-cccchhhhhhhhccCceEEEEeecc
Confidence            34678999999987 8999999999999999999998754

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=94.61  E-value=0.06  Score=30.75  Aligned_cols=35  Identities=14%  Similarity=0.183  Sum_probs=28.2

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecccchHH
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLK   55 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   55 (115)
                      +-|.|. |-+|.++++.|+++|+.|++.+++.+...
T Consensus         3 IgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~   37 (152)
T d1i36a2           3 VGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPST   37 (152)
T ss_dssp             EEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHH
T ss_pred             EEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHH
Confidence            445555 99999999999999999999887765543

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.58  E-value=0.078  Score=31.75  Aligned_cols=39  Identities=13%  Similarity=0.133  Sum_probs=34.0

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   52 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~   52 (115)
                      .++.|+++.|.|. |.||+.+++.+...|.+|+..++...
T Consensus        43 ~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          43 EKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             ceecccceEEeec-ccchHHHHHHHHhhcccccccccccc
Confidence            4567999999988 89999999999999999999887543

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=94.47  E-value=0.1  Score=29.70  Aligned_cols=43  Identities=19%  Similarity=0.066  Sum_probs=33.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHh
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~   61 (115)
                      +++.|+|+ |.+|..+|..|+.++. .+++++.+++........+
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl   45 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDL   45 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHh
Confidence            56778886 9999999999998875 7999998877655444444

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=94.42  E-value=0.019  Score=32.83  Aligned_cols=81  Identities=17%  Similarity=0.092  Sum_probs=44.2

Q ss_pred             CCChHHHHHHHHHHHhCCe-EEEEecccchHHHHHHHhhCCCCCCCC--CccceEEEEeecCCCHHHHHHHHHHHHHHcC
Q 033624           25 ASSGLGREFCLDLAKAGCR-IVAAARRVDRLKSLCDEINKPGMVGSP--DSVRAVAVELDVCADGATIEISVQKAWEAFG  101 (115)
Q Consensus        25 ~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~di~~~~~~~~~~~~~~~~~~~  101 (115)
                      |.|-+|+++++.|.+ +++ +.+..|+.++.+++.+..........+  ....+.+..+    ++..+..++.++.   .
T Consensus         6 G~G~mg~~l~~~L~~-~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~~~~DiVil~v----~d~~i~~v~~~l~---~   77 (153)
T d2i76a2           6 GTGTLTRFFLECLKD-RYEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIV----PDRYIKTVANHLN---L   77 (153)
T ss_dssp             SCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECS----CTTTHHHHHTTTC---C
T ss_pred             eCcHHHHHHHHHHHh-CCCEEEEEeCChhhhcchhhcccccccchhhhhccCcEEEEec----cchhhhHHHhhhc---c
Confidence            347899999998865 455 468899999998888876644321111  1223333333    2334555554431   1


Q ss_pred             CccEEEeCCccC
Q 033624          102 RVDALVNNAGIR  113 (115)
Q Consensus       102 ~id~li~naG~~  113 (115)
                      +=.++|++++..
T Consensus        78 ~~~ivi~~s~~~   89 (153)
T d2i76a2          78 GDAVLVHCSGFL   89 (153)
T ss_dssp             SSCCEEECCSSS
T ss_pred             cceeeeecccch
Confidence            224677777653

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=94.41  E-value=0.2  Score=28.49  Aligned_cols=43  Identities=21%  Similarity=0.344  Sum_probs=33.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCC--eEEEEecccchHHHHHHHhh
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~   62 (115)
                      ++.|+|+ |.+|..+|..++.++.  ++++++.+++..+.....++
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~   47 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQ   47 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHH
Confidence            5677786 9999999999998875  69999998876654444444

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=94.28  E-value=0.1  Score=33.02  Aligned_cols=77  Identities=17%  Similarity=0.194  Sum_probs=48.6

Q ss_pred             cEEEEecCCCh-HHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           18 KVVMVTGASSG-LGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        18 ~~~lvtG~~~g-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      ..++-.|+++| |+..+++   ...++|++++.++..+.-+.+..+..+     ...++.....|+. +.         .
T Consensus       112 ~~vld~g~GsG~i~~~la~---~~~~~v~a~Dis~~Al~~A~~Na~~~~-----~~~~~~i~~~~~~-~~---------~  173 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVAK---FSDAIVFATDVSSKAVEIARKNAERHG-----VSDRFFVRKGEFL-EP---------F  173 (271)
T ss_dssp             CEEEEESCTTSHHHHHHHH---HSSCEEEEEESCHHHHHHHHHHHHHTT-----CTTSEEEEESSTT-GG---------G
T ss_pred             cEEEEeeeeeehhhhhhhh---cccceeeechhhhhHHHHHHHHHHHcC-----CCceeEEeecccc-cc---------c
Confidence            34554555554 5555442   356789999999998887777766543     1235666677764 21         2


Q ss_pred             HHHcCCccEEEeCCcc
Q 033624           97 WEAFGRVDALVNNAGI  112 (115)
Q Consensus        97 ~~~~~~id~li~naG~  112 (115)
                      ....+++|++|.|--+
T Consensus       174 ~~~~~~fDlIVsNPPY  189 (271)
T d1nv8a_         174 KEKFASIEMILSNPPY  189 (271)
T ss_dssp             GGGTTTCCEEEECCCC
T ss_pred             ccccCcccEEEEcccc
Confidence            2345789999999544

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=94.28  E-value=0.26  Score=29.31  Aligned_cols=43  Identities=16%  Similarity=0.150  Sum_probs=36.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE   60 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   60 (115)
                      ..+++|.|+ +-.|...++.....|++|.+.+.+.+.++++...
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l   71 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESL   71 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHT
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHh
Confidence            457888888 7778998998889999999999999888776654

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=94.23  E-value=0.028  Score=35.14  Aligned_cols=37  Identities=19%  Similarity=0.311  Sum_probs=30.1

Q ss_pred             CCcEEEEecCCChHHHHH-----HHHHHHhCCeEEEEecccc
Q 033624           16 NEKVVMVTGASSGLGREF-----CLDLAKAGCRIVAAARRVD   52 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~-----a~~l~~~g~~v~~~~r~~~   52 (115)
                      .++.++|+.|-||.|+.+     |..|+++|.+|.+++-++.
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            477777887789998864     6888899999999987754

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=94.07  E-value=0.042  Score=33.51  Aligned_cols=31  Identities=19%  Similarity=0.297  Sum_probs=26.7

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      ++|.|+ |.-|..+|..|+++|.+|+++.++.
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~   35 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGN   35 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            677877 6788999999999999999998754

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=93.98  E-value=0.061  Score=33.52  Aligned_cols=34  Identities=26%  Similarity=0.459  Sum_probs=30.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEe
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAA   48 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~   48 (115)
                      ++.|++++|-|- |-+|..+|+.|.+.|++|+.++
T Consensus        28 ~l~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          28 GIEGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEee
Confidence            578999999975 8999999999999999988765

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.93  E-value=0.041  Score=34.36  Aligned_cols=32  Identities=31%  Similarity=0.254  Sum_probs=28.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      .++|.|+ |-.|..+|..|.++|.+|+++.+++
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4788888 5889999999999999999998875

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=93.93  E-value=0.18  Score=28.97  Aligned_cols=45  Identities=7%  Similarity=0.071  Sum_probs=33.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhh
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~   62 (115)
                      ..++.|.|+ |.+|..++..+..++. .+++++++++........++
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~   48 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTS   48 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchh
Confidence            346888895 9999999988887775 68899988766554444343

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.82  E-value=0.06  Score=33.47  Aligned_cols=32  Identities=16%  Similarity=0.175  Sum_probs=26.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEec
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAAR   49 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r   49 (115)
                      .++++|.|+ |--|+..|.+|++.|++|.++..
T Consensus         5 ~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa   36 (449)
T d2dw4a2           5 TGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEA   36 (449)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeC
Confidence            456888888 66689999999999999998754

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=93.78  E-value=0.035  Score=34.11  Aligned_cols=31  Identities=23%  Similarity=0.183  Sum_probs=26.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      .++|.|+ |--|...|.+|+++|++|+++.++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESS   32 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence            3778888 667899999999999999998765

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=93.77  E-value=0.28  Score=27.84  Aligned_cols=32  Identities=22%  Similarity=0.225  Sum_probs=27.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCC--eEEEEecc
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGC--RIVAAARR   50 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~   50 (115)
                      ++.|+|++|.+|..+|..+..++.  .+++++.+
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~   35 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIP   35 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCG
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecC
Confidence            578999999999999999999875  58888854

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.74  E-value=0.037  Score=33.47  Aligned_cols=35  Identities=14%  Similarity=0.424  Sum_probs=28.5

Q ss_pred             CCcEEEEecCCChHHHH-----HHHHHHHhCCeEEEEecc
Q 033624           16 NEKVVMVTGASSGLGRE-----FCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~-----~a~~l~~~g~~v~~~~r~   50 (115)
                      ++|++.|+++.||.|+.     +|..|++.|.+|.+++-+
T Consensus         1 m~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            37889999998888774     567788899999999854

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=93.73  E-value=0.049  Score=34.36  Aligned_cols=30  Identities=20%  Similarity=0.502  Sum_probs=26.5

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      ++|.|+ |..|...|.+++++|++|+++.+.
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~   48 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKE   48 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            788877 788999999999999999998764

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.64  E-value=0.12  Score=29.70  Aligned_cols=23  Identities=22%  Similarity=0.397  Sum_probs=20.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHhC
Q 033624           19 VVMVTGASSGLGREFCLDLAKAG   41 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g   41 (115)
                      ++.|+|++|.+|..++..|+..+
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~   27 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGS   27 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHHHH
Confidence            78999999999999999998754

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.57  E-value=0.17  Score=30.88  Aligned_cols=85  Identities=13%  Similarity=0.087  Sum_probs=54.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      .|.++|-.|+++|.-.++..++.....+|+.++++++..+.+.+.+++.... ......+.+...|....          
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~-~~~~~~~~~~~gD~~~~----------  144 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPT-LLSSGRVQLVVGDGRMG----------  144 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTH-HHHTSSEEEEESCGGGC----------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcc-cccccceEEEEeecccc----------
Confidence            4789999999988777777777777779999999988877776665432100 00012355555665311          


Q ss_pred             HHHHcCCccEEEeCCcc
Q 033624           96 AWEAFGRVDALVNNAGI  112 (115)
Q Consensus        96 ~~~~~~~id~li~naG~  112 (115)
                       ....+.+|.++.+++.
T Consensus       145 -~~~~~~fD~I~~~~~~  160 (224)
T d1i1na_         145 -YAEEAPYDAIHVGAAA  160 (224)
T ss_dssp             -CGGGCCEEEEEECSBB
T ss_pred             -cchhhhhhhhhhhcch
Confidence             1123467888877664

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=93.56  E-value=0.31  Score=27.70  Aligned_cols=89  Identities=10%  Similarity=0.040  Sum_probs=50.1

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHHH
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEA   99 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~~   99 (115)
                      +-+.|- |-+|..+|++|++.|+.+ +..|+.++..+..+........ ...-.....+-..+ .+...+....+.+...
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~-~~~~~v~~~~~~l~~~   78 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVP-LERVAEARVIFTCL-PTTREVYEVAEALYPY   78 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECC-GGGGGGCSEEEECC-SSHHHHHHHHHHHTTT
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccc-cccccceeEEEecc-cchhhhhhhhcccccc
Confidence            445565 789999999999888654 5777777766666554322110 00001111222223 2455666666666555


Q ss_pred             cCCccEEEeCCcc
Q 033624          100 FGRVDALVNNAGI  112 (115)
Q Consensus       100 ~~~id~li~naG~  112 (115)
                      ..+-.++|.++.+
T Consensus        79 ~~~~~~iid~sT~   91 (156)
T d2cvza2          79 LREGTYWVDATSG   91 (156)
T ss_dssp             CCTTEEEEECSCC
T ss_pred             ccccccccccccC
Confidence            5555666666543

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.51  E-value=0.099  Score=33.53  Aligned_cols=35  Identities=23%  Similarity=0.304  Sum_probs=30.9

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEe
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAA   48 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~   48 (115)
                      ..+.|++++|-|- |-+|..+|+.|.+.|++|+.++
T Consensus        32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            3578999999887 8899999999999999988765

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=93.50  E-value=0.05  Score=32.54  Aligned_cols=31  Identities=26%  Similarity=0.292  Sum_probs=25.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCC-eEEEEecc
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   50 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~   50 (115)
                      .++|.|+ |--|...|..|+++|. +|+++.++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~   33 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEAT   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECC
Confidence            3778887 7778999999999997 59988764

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.47  E-value=0.072  Score=30.79  Aligned_cols=30  Identities=20%  Similarity=0.248  Sum_probs=24.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEE
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAA   47 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~   47 (115)
                      ++.++|.|+ |.+|..+|..|.+.|.++.++
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHcCCceEEE
Confidence            567888887 899999999999999875444

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.45  E-value=0.25  Score=27.51  Aligned_cols=74  Identities=15%  Similarity=0.196  Sum_probs=47.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEE-ecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAA-ARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      ++.|.|++|-+|+.+++.+.+.+..++.. +++....      +.         ...   +-.|.+ .++.....++.+.
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~------~~---------~~D---VvIDFS-~p~~~~~~l~~~~   62 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE------LD---------SPD---VVIDFS-SPEALPKTVDLCK   62 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE------CS---------CCS---EEEECS-CGGGHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH------hc---------cCC---EEEEec-CHHHHHHHHHHHH
Confidence            47899999999999999888889886643 4332110      00         111   335775 6777777676665


Q ss_pred             HHcCCccEEEeCCccC
Q 033624           98 EAFGRVDALVNNAGIR  113 (115)
Q Consensus        98 ~~~~~id~li~naG~~  113 (115)
                      +.  ++.+++-..|..
T Consensus        63 ~~--~~p~ViGTTG~~   76 (128)
T d1vm6a3          63 KY--RAGLVLGTTALK   76 (128)
T ss_dssp             HH--TCEEEECCCSCC
T ss_pred             hc--CCCEEEEcCCCC
Confidence            54  456677666653

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=93.37  E-value=0.049  Score=34.65  Aligned_cols=31  Identities=16%  Similarity=0.306  Sum_probs=26.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      -++|.|| |--|..+|++|++.|.+|.++..+
T Consensus         3 dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~   33 (298)
T d1i8ta1           3 DYIIVGS-GLFGAVCANELKKLNKKVLVIEKR   33 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHGGGTCCEEEECSS
T ss_pred             cEEEECC-cHHHHHHHHHHHhCCCcEEEEECC
Confidence            3678887 777999999999999999998764

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=93.35  E-value=0.27  Score=31.63  Aligned_cols=78  Identities=10%  Similarity=-0.011  Sum_probs=49.5

Q ss_pred             CcEEEEecCC-ChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           17 EKVVMVTGAS-SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        17 ~~~~lvtG~~-~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      ++++|=..+. |+++..    ++..|++|+.++.+...++.+.+.++..+.    ...++.++..|+.       .++++
T Consensus       133 ~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~----~~~~~~~i~~D~~-------~~l~~  197 (309)
T d2igta1         133 PLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGL----EQAPIRWICEDAM-------KFIQR  197 (309)
T ss_dssp             CCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTC----TTSCEEEECSCHH-------HHHHH
T ss_pred             CCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcc----cCCcEEEEeCCHH-------HhHHH
Confidence            5566656554 444443    456799999999998888777765543220    1235677777763       13455


Q ss_pred             HHHHcCCccEEEeC
Q 033624           96 AWEAFGRVDALVNN  109 (115)
Q Consensus        96 ~~~~~~~id~li~n  109 (115)
                      ......+.|++|.+
T Consensus       198 ~~~~~~~fD~IilD  211 (309)
T d2igta1         198 EERRGSTYDIILTD  211 (309)
T ss_dssp             HHHHTCCBSEEEEC
T ss_pred             HhhcCCCCCEEEEC
Confidence            55555689999875

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=93.33  E-value=0.069  Score=32.84  Aligned_cols=33  Identities=21%  Similarity=0.201  Sum_probs=28.2

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecccch
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDR   53 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   53 (115)
                      ++|.|+ |.-|...|..|+++|.+|+++.+++..
T Consensus         7 ViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~   39 (253)
T d2gqfa1           7 NIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKI   39 (253)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence            778887 777899999999999999999887543

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=93.28  E-value=0.29  Score=26.54  Aligned_cols=81  Identities=11%  Similarity=0.075  Sum_probs=47.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      |++++|.=-...+...+...|.+.|+.|+....+....   .+.+++..       ..+..  +|+.-+..+=-.++.++
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~a---l~~~~~~~-------~dlii--lD~~mp~~~G~e~~~~i   68 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREA---VEKYKELK-------PDIVT--MDITMPEMNGIDAIKEI   68 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHH---HHHHHHHC-------CSEEE--EECSCGGGCHHHHHHHH
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHH---HHHHHhcc-------CCEEE--EecCCCCCCHHHHHHHH
Confidence            67888887777777788888888899887554444332   22222211       23333  44432222334456676


Q ss_pred             HHHcCCccEEEeC
Q 033624           97 WEAFGRVDALVNN  109 (115)
Q Consensus        97 ~~~~~~id~li~n  109 (115)
                      ++..+.+-+++..
T Consensus        69 r~~~~~~pvi~ls   81 (118)
T d1u0sy_          69 MKIDPNAKIIVCS   81 (118)
T ss_dssp             HHHCTTCCEEEEE
T ss_pred             HHhCCCCcEEEEE
Confidence            7777777777654

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=93.22  E-value=0.38  Score=27.66  Aligned_cols=45  Identities=22%  Similarity=0.353  Sum_probs=33.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHh--CCeEEEE--ecccchHHHHHHHhh
Q 033624           18 KVVMVTGASSGLGREFCLDLAKA--GCRIVAA--ARRVDRLKSLCDEIN   62 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~--g~~v~~~--~r~~~~~~~~~~~~~   62 (115)
                      |++.|.|++|.||.....-+.+.  .++|+..  .++-+.+.+.+.+++
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~   50 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFS   50 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHC
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHh
Confidence            57899999999999988877775  3566544  345566666666664

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=93.15  E-value=0.26  Score=25.67  Aligned_cols=36  Identities=14%  Similarity=0.211  Sum_probs=27.2

Q ss_pred             EEEEecCCChHHH-HHHHHHHHhCCeEEEEecccchHH
Q 033624           19 VVMVTGASSGLGR-EFCLDLAKAGCRIVAAARRVDRLK   55 (115)
Q Consensus        19 ~~lvtG~~~giG~-~~a~~l~~~g~~v~~~~r~~~~~~   55 (115)
                      ++.+.|- +|+|- ++|+.|.++|++|...++......
T Consensus         3 ~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t   39 (89)
T d1j6ua1           3 KIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERT   39 (89)
T ss_dssp             EEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHH
T ss_pred             EEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhH
Confidence            4667776 44444 689999999999999998865443

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=93.13  E-value=0.16  Score=29.20  Aligned_cols=46  Identities=22%  Similarity=0.336  Sum_probs=32.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHh--CCeEEEEe--cccchHHHHHHHhh
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKA--GCRIVAAA--RRVDRLKSLCDEIN   62 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~--g~~v~~~~--r~~~~~~~~~~~~~   62 (115)
                      .|++.|.|+||.||.....-+.+.  .++|+.++  ++-..+.+...+++
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~   51 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTN   51 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhc
Confidence            478999999999999988877765  46666543  44455555555554

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=93.12  E-value=0.081  Score=29.73  Aligned_cols=39  Identities=21%  Similarity=0.423  Sum_probs=30.4

Q ss_pred             CCcEEEEecCCC----------hHHHHHHHHHHHhCCeEEEEecccchH
Q 033624           16 NEKVVMVTGASS----------GLGREFCLDLAKAGCRIVAAARRVDRL   54 (115)
Q Consensus        16 ~~~~~lvtG~~~----------giG~~~a~~l~~~g~~v~~~~r~~~~~   54 (115)
                      .-++++|.|++.          .-+...++.|.+.|++++++..|++..
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TV   54 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATI   54 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCG
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhh
Confidence            457899999842          335667888899999999998888754

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=93.10  E-value=0.1  Score=32.80  Aligned_cols=34  Identities=24%  Similarity=0.298  Sum_probs=30.0

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEe
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAA   48 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~   48 (115)
                      ++.|++++|-|. |-+|..+++.|.+.|++|+.++
T Consensus        33 ~l~g~~v~IQGf-GnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          33 TLVGKTVALAGF-GNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CSTTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEe
Confidence            578999999985 8899999999999999988664

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.09  E-value=0.072  Score=33.55  Aligned_cols=30  Identities=27%  Similarity=0.290  Sum_probs=25.3

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      ++|.|+ |--|...|.+|++.|.+|+++.++
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~   31 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEAR   31 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence            567777 667999999999999999998754

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=93.02  E-value=0.29  Score=25.79  Aligned_cols=39  Identities=10%  Similarity=0.022  Sum_probs=29.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRL   54 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   54 (115)
                      ..+++.+.|-++-=-.++|+.|.++|++|...++.....
T Consensus         7 ~~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~~~~~   45 (96)
T d1p3da1           7 RVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVV   45 (96)
T ss_dssp             TCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHH
T ss_pred             hCCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCCCChh
Confidence            467888888743222467999999999999999876543

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=92.84  E-value=0.31  Score=31.31  Aligned_cols=80  Identities=15%  Similarity=0.123  Sum_probs=52.9

Q ss_pred             CCCcEEEEecCCC-hHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           15 LNEKVVMVTGASS-GLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        15 ~~~~~~lvtG~~~-giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ..|+++|=.++.. +++.    .++..+.+|+.++.++..++.+.+.++..+      -..+.++..|.. +      +.
T Consensus       144 ~~g~rVLDl~~gtG~~s~----~~a~g~~~V~~vD~s~~al~~a~~n~~~ng------l~~~~~i~~d~~-~------~~  206 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFAL----HLALGFREVVAVDSSAEALRRAEENARLNG------LGNVRVLEANAF-D------LL  206 (318)
T ss_dssp             CCEEEEEEETCTTTHHHH----HHHHHEEEEEEEESCHHHHHHHHHHHHHTT------CTTEEEEESCHH-H------HH
T ss_pred             hCCCeeeccCCCCcHHHH----HHHhcCCcEEeecchHHHHHHHHHHHHHcC------CCCcceeeccHH-H------Hh
Confidence            3577777777654 4443    344567789999999998888887776544      124677777663 1      23


Q ss_pred             HHHHHHcCCccEEEeCCc
Q 033624           94 QKAWEAFGRVDALVNNAG  111 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG  111 (115)
                      +.......+.|++|.+..
T Consensus       207 ~~~~~~~~~fD~Vi~DpP  224 (318)
T d1wxxa2         207 RRLEKEGERFDLVVLDPP  224 (318)
T ss_dssp             HHHHHTTCCEEEEEECCC
T ss_pred             hhhHhhhcCCCEEEEcCC
Confidence            344444568999998754

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.84  E-value=0.22  Score=28.26  Aligned_cols=38  Identities=13%  Similarity=-0.036  Sum_probs=30.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCC--eEEEEecccchHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGC--RIVAAARRVDRLKSL   57 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~   57 (115)
                      ++.|.|+ |.+|..+|..++.++.  ++++++.+++..+..
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~   41 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGE   41 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHH
Confidence            4667786 9999999999998875  599999887665443

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.78  E-value=0.42  Score=27.05  Aligned_cols=78  Identities=19%  Similarity=0.144  Sum_probs=50.3

Q ss_pred             CCCCcEEEEecCCC-hHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHH
Q 033624           14 DLNEKVVMVTGASS-GLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEI   91 (115)
Q Consensus        14 ~~~~~~~lvtG~~~-giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~   91 (115)
                      .+.|+.++=.+++. .+|..    .+.+|+ +|+.++.++...+.+.+.++..+     ...++..++.|.. .      
T Consensus        12 ~~~g~~vlDl~~GtG~~~ie----a~~rga~~v~~ve~~~~a~~~~~~n~~~~~-----~~~~~~ii~~D~~-~------   75 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAIE----AVSRGMSAAVLVEKNRKAQAIIQDNIIMTK-----AENRFTLLKMEAE-R------   75 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHHH----HHHTTCCEEEEECCCHHHHHHHHHHHHTTT-----CGGGEEEECSCHH-H------
T ss_pred             hCCCCeEEEcCCccCHHHHH----HHHhCcceeeeehhchhhhhhhhhhhhhcc-----cccchhhhccccc-c------
Confidence            35688887777654 45553    345676 79999999988887777777543     2345777777652 1      


Q ss_pred             HHHHHHHHcCCccEEEeCC
Q 033624           92 SVQKAWEAFGRVDALVNNA  110 (115)
Q Consensus        92 ~~~~~~~~~~~id~li~na  110 (115)
                      ++   ....++.|+++.+.
T Consensus        76 ~l---~~~~~~fDiIf~DP   91 (152)
T d2esra1          76 AI---DCLTGRFDLVFLDP   91 (152)
T ss_dssp             HH---HHBCSCEEEEEECC
T ss_pred             cc---cccccccceeEech
Confidence            11   22245678887753

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.40  E-value=0.53  Score=29.78  Aligned_cols=61  Identities=18%  Similarity=0.207  Sum_probs=38.3

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecC
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVC   83 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~   83 (115)
                      ...++++|-.|++.|+   ++..+++.|+ +|++++.++... .+.+.....+     ...++.++..|+.
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~-~a~~~~~~~~-----~~~~i~~~~~~~~   94 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILY-QAMDIIRLNK-----LEDTITLIKGKIE   94 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHH-HHHHHHHHTT-----CTTTEEEEESCTT
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHH-HHHHHHHHhC-----CCccceEEEeeHH
Confidence            3568999999998774   4556677887 688888776533 3343333322     1235666666653

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=92.27  E-value=0.09  Score=33.42  Aligned_cols=30  Identities=20%  Similarity=0.486  Sum_probs=26.1

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      ++|.|+ |.-|...|..|+++|++|+++.+.
T Consensus        26 VvVIG~-G~aGl~aA~~la~~G~~V~llEk~   55 (322)
T d1d4ca2          26 VVIIGS-GGAGLAAAVSARDAGAKVILLEKE   55 (322)
T ss_dssp             EEEECS-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            777777 778999999999999999999764

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=92.27  E-value=0.22  Score=28.99  Aligned_cols=45  Identities=13%  Similarity=0.224  Sum_probs=30.5

Q ss_pred             CCcEEEEecCC-ChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCC
Q 033624           16 NEKVVMVTGAS-SGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKP   64 (115)
Q Consensus        16 ~~~~~lvtG~~-~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~   64 (115)
                      .|.++|=.+++ |.+|.    +.+.+|++|+.++.++...+.+.+.++..
T Consensus        41 ~g~~vLDl~~G~G~~~i----~a~~~ga~vv~vD~~~~a~~~~~~N~~~~   86 (171)
T d1ws6a1          41 RRGRFLDPFAGSGAVGL----EAASEGWEAVLVEKDPEAVRLLKENVRRT   86 (171)
T ss_dssp             TCCEEEEETCSSCHHHH----HHHHTTCEEEEECCCHHHHHHHHHHHHHH
T ss_pred             CCCeEEEeccccchhhh----hhhhccchhhhcccCHHHHhhhhHHHHhh
Confidence            45566655554 44443    45567999999999988887776666543

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=92.18  E-value=0.11  Score=33.04  Aligned_cols=30  Identities=30%  Similarity=0.471  Sum_probs=25.9

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      ++|.|+ |..|...|.+++++|.+|+++.+.
T Consensus        22 VvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~   51 (317)
T d1qo8a2          22 VLVVGA-GSAGFNASLAAKKAGANVILVDKA   51 (317)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            677776 888999999999999999999764

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=92.17  E-value=0.073  Score=28.62  Aligned_cols=38  Identities=11%  Similarity=0.084  Sum_probs=30.2

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      ..+.||+++|.|++ --|..+|..|++.+.+++...|+.
T Consensus        28 ~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          28 ELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             GGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             hhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecC
Confidence            34679999999984 557888999999888887776654

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=92.04  E-value=0.23  Score=26.80  Aligned_cols=34  Identities=21%  Similarity=0.159  Sum_probs=27.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHh---CCeEEEEeccc
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKA---GCRIVAAARRV   51 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~---g~~v~~~~r~~   51 (115)
                      .++++|.|+ |.+|..+|..|.+.   |.+|.++.+.+
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            478889988 89999999877654   78898888754

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=91.98  E-value=0.37  Score=28.73  Aligned_cols=58  Identities=21%  Similarity=0.095  Sum_probs=39.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecC
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVC   83 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~   83 (115)
                      +.++|=.|++.|.   .+..|+++|++|+.++.+++..+.+.+.+...+      ..++.++..|..
T Consensus        16 ~~rVLDiGcG~G~---~~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~------~~~i~~~~~d~~   73 (231)
T d1vl5a_          16 NEEVLDVATGGGH---VANAFAPFVKKVVAFDLTEDILKVARAFIEGNG------HQQVEYVQGDAE   73 (231)
T ss_dssp             CCEEEEETCTTCH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTT------CCSEEEEECCC-
T ss_pred             cCEEEEecccCcH---HHHHHHHhCCEEEEEECCHHHHhhhhhcccccc------cccccccccccc
Confidence            5788889988773   345677889999999999887776665554332      134556666553

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=91.90  E-value=0.4  Score=29.30  Aligned_cols=60  Identities=12%  Similarity=0.053  Sum_probs=41.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecC
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVC   83 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~   83 (115)
                      .++++|=.|++.|   .....+++.|. +|+.++.+++.++.+.+..+...     ...++.+...|+.
T Consensus        24 ~~~~VLDlGCG~G---~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~-----~~~~v~f~~~D~~   84 (252)
T d1ri5a_          24 RGDSVLDLGCGKG---GDLLKYERAGIGEYYGVDIAEVSINDARVRARNMK-----RRFKVFFRAQDSY   84 (252)
T ss_dssp             TTCEEEEETCTTT---TTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSC-----CSSEEEEEESCTT
T ss_pred             CcCEEEEecccCc---HHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcC-----CCcceEEEEcchh
Confidence            4778999998766   23455667775 69999999998888776665432     1234666666653

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=91.87  E-value=0.13  Score=30.54  Aligned_cols=30  Identities=13%  Similarity=0.058  Sum_probs=26.4

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      ++|.|+ |..|...|..+++.|.+|+++.++
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            577777 888999999999999999999875

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.83  E-value=0.89  Score=29.06  Aligned_cols=80  Identities=13%  Similarity=0.108  Sum_probs=52.4

Q ss_pred             CCcEEEEecCC-ChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           16 NEKVVMVTGAS-SGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        16 ~~~~~lvtG~~-~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .|+++|=.++. |+++..    ++..|+ +|+.++.++..++.+.+.++..+     -..++.++..|+. +      .+
T Consensus       145 ~g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ng-----l~~~~~~~~~d~~-~------~~  208 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNG-----VEDRMKFIVGSAF-E------EM  208 (324)
T ss_dssp             TTCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTT-----CGGGEEEEESCHH-H------HH
T ss_pred             CCCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcC-----CCccceeeechhh-h------hh
Confidence            37778777765 444443    345676 79999999998888877776544     1245677777663 1      23


Q ss_pred             HHHHHHcCCccEEEeCCc
Q 033624           94 QKAWEAFGRVDALVNNAG  111 (115)
Q Consensus        94 ~~~~~~~~~id~li~naG  111 (115)
                      ..+.....++|++|.+..
T Consensus       209 ~~~~~~~~~fD~Vi~DpP  226 (324)
T d2as0a2         209 EKLQKKGEKFDIVVLDPP  226 (324)
T ss_dssp             HHHHHTTCCEEEEEECCC
T ss_pred             HHHHhccCCCCchhcCCc
Confidence            344444568999998764

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=91.79  E-value=0.16  Score=30.18  Aligned_cols=30  Identities=20%  Similarity=0.334  Sum_probs=26.4

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      ++|.|+ |..|...|..+++.|.+|+++.++
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~   35 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKR   35 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEec
Confidence            677887 778999999999999999999765

>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Nucleotide excision repair enzyme UvrB
species: Thermus thermophilus [TaxId: 274]

Probab=91.51  E-value=0.73  Score=27.00  Aligned_cols=61  Identities=20%  Similarity=0.229  Sum_probs=47.0

Q ss_pred             HhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHHHcCCccEEEeCC
Q 033624           39 KAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNA  110 (115)
Q Consensus        39 ~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~~~~~id~li~na  110 (115)
                      ..|.++++.+.+....+.+...+...+       .++..+..++  +...-...+++...  |++++||+..
T Consensus        29 ~~g~r~lvfc~t~~~~~~l~~~L~~~G-------i~a~~~Hg~~--~~~eR~~~l~~F~~--G~~~vLVaT~   89 (174)
T d1c4oa2          29 ARGERTLVTVLTVRMAEELTSFLVEHG-------IRARYLHHEL--DAFKRQALIRDLRL--GHYDCLVGIN   89 (174)
T ss_dssp             HTTCEEEEECSSHHHHHHHHHHHHHTT-------CCEEEECTTC--CHHHHHHHHHHHHT--TSCSEEEESC
T ss_pred             hcCCcEEEEEcchhHHHHHHHHHHhcC-------CceEEEeccc--chHHHHHHHHHHHC--CCeEEEEeee
Confidence            468889999999888888888888765       6788888887  35556666666544  7899998864

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.49  E-value=0.2  Score=30.43  Aligned_cols=32  Identities=22%  Similarity=0.312  Sum_probs=26.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCC-eEEEEeccc
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGC-RIVAAARRV   51 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~   51 (115)
                      .++|.|| |--|..+|..|.+.|. .|.++.+++
T Consensus         3 ~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGA-GIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            4788887 7779999999999996 788887754

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=91.41  E-value=0.74  Score=26.92  Aligned_cols=80  Identities=14%  Similarity=0.208  Sum_probs=49.6

Q ss_pred             CCCcEEEEecC-CChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHH
Q 033624           15 LNEKVVMVTGA-SSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEIS   92 (115)
Q Consensus        15 ~~~~~~lvtG~-~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~   92 (115)
                      ..|.++|=..+ +|.+|.+    .+.+|+ +|+.++.+......+.+.++...     ...++..+..|+.       .+
T Consensus        40 ~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~-----~~~~~~i~~~D~~-------~~  103 (182)
T d2fhpa1          40 FDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITK-----EPEKFEVRKMDAN-------RA  103 (182)
T ss_dssp             CSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHT-----CGGGEEEEESCHH-------HH
T ss_pred             cCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhh-----cccccccccccch-------hh
Confidence            45676665554 4556664    455788 59999999888777766665332     1235777777663       13


Q ss_pred             HHHHHHHcCCccEEEeCC
Q 033624           93 VQKAWEAFGRVDALVNNA  110 (115)
Q Consensus        93 ~~~~~~~~~~id~li~na  110 (115)
                      +.+......+.|+++..-
T Consensus       104 l~~~~~~~~~fDlIflDP  121 (182)
T d2fhpa1         104 LEQFYEEKLQFDLVLLDP  121 (182)
T ss_dssp             HHHHHHTTCCEEEEEECC
T ss_pred             hhhhcccCCCcceEEech
Confidence            444444445788888754

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=91.33  E-value=0.38  Score=29.27  Aligned_cols=85  Identities=18%  Similarity=0.157  Sum_probs=50.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHH-HhC----CeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLA-KAG----CRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~-~~g----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      .+.++|..|+++|.-.++...++ ..|    .+|+.+.++++..+.+.+.+...... .....++.+...|....     
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~-~~~~~nv~~~~~d~~~~-----  153 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRS-MLDSGQLLIVEGDGRKG-----  153 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHH-HHHHTSEEEEESCGGGC-----
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchh-hcCccEEEEEecccccc-----
Confidence            47899999998887666665555 445    47999998877665554433211000 00012567777776421     


Q ss_pred             HHHHHHHHHcCCccEEEeCCcc
Q 033624           91 ISVQKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~  112 (115)
                            ....++.|.++.++++
T Consensus       154 ------~~~~~~fD~Iiv~~a~  169 (223)
T d1r18a_         154 ------YPPNAPYNAIHVGAAA  169 (223)
T ss_dssp             ------CGGGCSEEEEEECSCB
T ss_pred             ------cccccceeeEEEEeec
Confidence                  1234578888887765

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.27  E-value=0.2  Score=29.89  Aligned_cols=30  Identities=20%  Similarity=0.354  Sum_probs=26.0

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      ++|.|+ |.-|...|..+++.|.+|+++.+.
T Consensus         8 viVIG~-GpAGl~aA~~aa~~G~kV~lie~~   37 (233)
T d1v59a1           8 VVIIGG-GPAGYVAAIKAAQLGFNTACVEKR   37 (233)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEec
Confidence            577777 777999999999999999999865

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.25  E-value=0.28  Score=27.37  Aligned_cols=34  Identities=21%  Similarity=0.315  Sum_probs=27.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHH----HhCCeEEEEeccc
Q 033624           17 EKVVMVTGASSGLGREFCLDLA----KAGCRIVAAARRV   51 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~----~~g~~v~~~~r~~   51 (115)
                      .++++|.|+ |.+|..+|..|+    +.|.+|.++.++.
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence            678888887 889998888885    4688998887643

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=91.21  E-value=0.095  Score=30.71  Aligned_cols=34  Identities=15%  Similarity=0.138  Sum_probs=28.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      ++.++|.|+ |..|...|..+++.|.+|+++.+..
T Consensus         5 ~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~~   38 (190)
T d1trba1           5 HSKLLILGS-GPAGYTAAVYAARANLQPVLITGME   38 (190)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCceEEEEeec
Confidence            456888888 7789999999999999999987643

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.18  E-value=0.095  Score=31.49  Aligned_cols=34  Identities=18%  Similarity=0.419  Sum_probs=27.1

Q ss_pred             cEEEEecCCChHHHH-----HHHHHHHhCCeEEEEeccc
Q 033624           18 KVVMVTGASSGLGRE-----FCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        18 ~~~lvtG~~~giG~~-----~a~~l~~~g~~v~~~~r~~   51 (115)
                      |++.|+++-||.|+.     +|..|+++|.+|.+++-+.
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            678899888887764     5678888999999997653

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=91.13  E-value=0.17  Score=32.12  Aligned_cols=35  Identities=26%  Similarity=0.163  Sum_probs=29.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   52 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~   52 (115)
                      .--++|+|| |.-|..+|..|.+.|.+|+++.++++
T Consensus         7 ~~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           7 EVDVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CCCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            345888888 77789999999999999999987653

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=90.94  E-value=0.19  Score=31.69  Aligned_cols=33  Identities=21%  Similarity=0.312  Sum_probs=22.4

Q ss_pred             cEEEEecCCCh--H--HHHHHHHHHHhCCeEEEEecc
Q 033624           18 KVVMVTGASSG--L--GREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        18 ~~~lvtG~~~g--i--G~~~a~~l~~~g~~v~~~~r~   50 (115)
                      |+++|++|+.|  +  ..+++++|.++|+.|..++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            45666665433  3  346889999999999876643

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=90.92  E-value=0.2  Score=29.90  Aligned_cols=30  Identities=13%  Similarity=0.209  Sum_probs=26.5

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      ++|.|+ |..|...|..+++.|.+|+++.+.
T Consensus         8 lvVIG~-GpaGl~aA~~aa~~G~~V~liE~~   37 (220)
T d1lvla1           8 LLIIGG-GPGGYVAAIRAGQLGIPTVLVEGQ   37 (220)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            778886 788999999999999999999865

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=90.91  E-value=0.18  Score=29.05  Aligned_cols=30  Identities=23%  Similarity=0.350  Sum_probs=25.5

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      ++|.|+ |..|...|..+++.|.+|+++.++
T Consensus         4 ViIIGg-GpaGl~AAi~aar~G~~v~iie~~   33 (184)
T d1fl2a1           4 VLIVGS-GPAGAAAAIYSARKGIRTGLMGER   33 (184)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCeEEEEEEe
Confidence            567776 888999999999999999998753

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.78  E-value=0.034  Score=33.56  Aligned_cols=25  Identities=24%  Similarity=0.250  Sum_probs=21.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeE
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRI   44 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v   44 (115)
                      +++|.|+ |-+|..+|.+|+++|.+|
T Consensus         2 kV~VIGa-Gi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           2 RVVVIGA-GVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHHTTT
T ss_pred             EEEEECc-hHHHHHHHHHHHHCCCCc
Confidence            4788887 888999999999999754

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.77  E-value=0.33  Score=27.76  Aligned_cols=33  Identities=21%  Similarity=0.348  Sum_probs=25.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCe-EEEEecc
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCR-IVAAARR   50 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~-v~~~~r~   50 (115)
                      +++++|.|| |..+...|..+.++|+. |.++.|.
T Consensus        45 ~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr   78 (153)
T d1gtea3          45 RGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRK   78 (153)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred             CCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeC
Confidence            556777776 77888999999999986 6677664

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.67  E-value=0.056  Score=36.45  Aligned_cols=34  Identities=35%  Similarity=0.461  Sum_probs=28.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecc
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   50 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~   50 (115)
                      .+.+++|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        36 ~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          36 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             hcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            3567999998 8899999999999998 68887764

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=90.52  E-value=0.21  Score=32.08  Aligned_cols=29  Identities=21%  Similarity=0.196  Sum_probs=24.4

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEec
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAAR   49 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r   49 (115)
                      ++|.|+ |.-|..+|.+|++.|.+|+++.+
T Consensus         5 VIVVGs-G~aG~v~A~rLaeaG~~VlvLEa   33 (367)
T d1n4wa1           5 AVVIGT-GYGAAVSALRLGEAGVQTLMLEM   33 (367)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEES
T ss_pred             EEEeCc-CHHHHHHHHHHHHCcCeEEEEec
Confidence            566666 66688999999999999999876

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=90.48  E-value=0.18  Score=31.94  Aligned_cols=30  Identities=13%  Similarity=0.151  Sum_probs=25.7

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      ++|.|+ |.-|...|.+++++|++|+++...
T Consensus         8 VvVIG~-G~AGl~AAl~aa~~G~~V~liEK~   37 (336)
T d2bs2a2           8 SLVIGG-GLAGLRAAVATQQKGLSTIVLSLI   37 (336)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEecC
Confidence            778876 778999999999999999998654

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=90.31  E-value=0.78  Score=25.29  Aligned_cols=39  Identities=15%  Similarity=0.215  Sum_probs=30.3

Q ss_pred             CCcEEEEecCCC----------hHHHHHHHHHHHhCCeEEEEecccchH
Q 033624           16 NEKVVMVTGASS----------GLGREFCLDLAKAGCRIVAAARRVDRL   54 (115)
Q Consensus        16 ~~~~~lvtG~~~----------giG~~~a~~l~~~g~~v~~~~r~~~~~   54 (115)
                      ..+.++|.|++.          .-+...++.|.+.|++++++..|++..
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTV   51 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETV   51 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSS
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhh
Confidence            357899999852          335677889999999999998887654

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=90.23  E-value=0.51  Score=28.35  Aligned_cols=59  Identities=12%  Similarity=0.062  Sum_probs=40.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecC
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVC   83 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~   83 (115)
                      .|.++|=.|++.|   .++..|++.+++|+.++.++..++.+.+.+...+      ..++.++..|+.
T Consensus        16 ~~~rILDiGcGtG---~~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~------~~~~~~~~~d~~   74 (234)
T d1xxla_          16 AEHRVLDIGAGAG---HTALAFSPYVQECIGVDATKEMVEVASSFAQEKG------VENVRFQQGTAE   74 (234)
T ss_dssp             TTCEEEEESCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHT------CCSEEEEECBTT
T ss_pred             CCCEEEEeCCcCc---HHHHHHHHhCCeEEEEeCChhhhhhhhhhhcccc------cccccccccccc
Confidence            3778899999877   4455677788999999999887776666554332      123556666553

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.21  E-value=0.99  Score=26.33  Aligned_cols=61  Identities=16%  Similarity=0.140  Sum_probs=39.3

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeec
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDV   82 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di   82 (115)
                      ..+++++=.|++.|   .++..+++.+.+|.+++.++...+.+.+.++..+.    ...++.+...|+
T Consensus        51 ~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l----~~~~i~~~~~d~  111 (194)
T d1dusa_          51 DKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNL----DNYDIRVVHSDL  111 (194)
T ss_dssp             CTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTC----TTSCEEEEECST
T ss_pred             CCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCC----ccceEEEEEcch
Confidence            34778888888766   33455667788999999998877776665543220    112355555555

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=90.21  E-value=0.22  Score=30.96  Aligned_cols=33  Identities=21%  Similarity=0.352  Sum_probs=27.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHHh-CCeEEEEeccc
Q 033624           18 KVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRV   51 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~-g~~v~~~~r~~   51 (115)
                      .-++|.|+ |.-|...|.+|+++ |.+|.++.+++
T Consensus        34 ~DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          34 TDVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHccCCeEEEEecCC
Confidence            44888888 77789999999874 99999999764

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=90.02  E-value=0.3  Score=29.28  Aligned_cols=31  Identities=23%  Similarity=0.289  Sum_probs=26.5

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      ++|.|+ |.-|...|..+++.|.+|+++.+..
T Consensus         9 viIIG~-GPaGlsaA~~aa~~G~~V~viE~~~   39 (229)
T d1ojta1           9 VVVLGG-GPGGYSAAFAAADEGLKVAIVERYK   39 (229)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence            567776 7889999999999999999998654

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.88  E-value=0.31  Score=28.83  Aligned_cols=30  Identities=20%  Similarity=0.230  Sum_probs=25.9

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      ++|.|+ |..|...|..+++.|.+|+++.+.
T Consensus         6 viIIG~-GpaG~~aA~~aar~G~kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGG-GSGGLASARRAAELGARAAVVESH   35 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            567776 789999999999999999999764

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=89.81  E-value=0.25  Score=31.47  Aligned_cols=29  Identities=21%  Similarity=0.455  Sum_probs=24.2

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEec
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAAR   49 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r   49 (115)
                      ++|.|+ |.-|..+|.+|++.|.+|+++.+
T Consensus         7 viIVGs-G~aG~v~A~~La~~G~kVlvLEa   35 (379)
T d2f5va1           7 VVIVGS-GPIGCTYARELVGAGYKVAMFDI   35 (379)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred             EEEECc-CHHHHHHHHHHhhCCCeEEEEec
Confidence            677776 55589999999999999999864

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=89.79  E-value=0.27  Score=31.26  Aligned_cols=33  Identities=18%  Similarity=0.157  Sum_probs=26.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhC--CeEEEEeccc
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAG--CRIVAAARRV   51 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g--~~v~~~~r~~   51 (115)
                      |+++|+|| |--|..+|..|++.|  .+|++..++.
T Consensus         5 KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           5 RKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            67888888 666888888998876  4899988774

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=89.63  E-value=0.48  Score=25.53  Aligned_cols=34  Identities=15%  Similarity=0.123  Sum_probs=26.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhC---CeEEEEeccc
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAG---CRIVAAARRV   51 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g---~~v~~~~r~~   51 (115)
                      .++++|.|+ |.+|..+|..|.+.+   .+|.++.+.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            578889988 999999998776654   5688887653

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=89.50  E-value=0.14  Score=31.66  Aligned_cols=33  Identities=21%  Similarity=0.388  Sum_probs=25.6

Q ss_pred             cEEEEecCCChHHHH-----HHHHHHHhCCeEEEEeccc
Q 033624           18 KVVMVTGASSGLGRE-----FCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        18 ~~~lvtG~~~giG~~-----~a~~l~~~g~~v~~~~r~~   51 (115)
                      |++.|+| -||.|+.     ++..|++.|.+|.+++-++
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~   39 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDP   39 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence            5677887 6777764     5568889999999998764

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=89.41  E-value=0.87  Score=24.52  Aligned_cols=81  Identities=16%  Similarity=0.148  Sum_probs=43.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      +++++|.=-...+-..+.+.|...|++|..+....+.++    .+++..       ..+  +-+|+.-+..+=-.++.++
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~eal~----~~~~~~-------~dl--illD~~mP~~~G~el~~~l   67 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALD----IVTKER-------PDL--VLLDMKIPGMDGIEILKRM   67 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHH----HHHHHC-------CSE--EEEESCCTTCCHHHHHHHH
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHHHHH----HHHhCC-------CCE--EEEeccCCCCCHHHHHHHH
Confidence            356777766667777777777788888876543333332    222111       123  3344431222223456666


Q ss_pred             HHHcCCccEEEeCC
Q 033624           97 WEAFGRVDALVNNA  110 (115)
Q Consensus        97 ~~~~~~id~li~na  110 (115)
                      ++..+.+-+++..+
T Consensus        68 r~~~~~~pvi~lt~   81 (119)
T d1peya_          68 KVIDENIRVIIMTA   81 (119)
T ss_dssp             HHHCTTCEEEEEES
T ss_pred             HHhCCCCcEEEEec
Confidence            66666666666543

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=89.36  E-value=0.19  Score=29.10  Aligned_cols=28  Identities=29%  Similarity=0.337  Sum_probs=22.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEE
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAA   47 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~   47 (115)
                      .++|.|+ |.+|..+|..|.+.|.++.++
T Consensus         5 ~VvIIGg-G~~G~e~A~~l~~~g~~v~i~   32 (183)
T d1d7ya1           5 PVVVLGA-GLASVSFVAELRQAGYQGLIT   32 (183)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCSCEE
T ss_pred             CEEEECc-cHHHHHHHHHHHhcCCceEEE
Confidence            3778886 889999999999999764433

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=89.32  E-value=0.37  Score=28.41  Aligned_cols=30  Identities=23%  Similarity=0.260  Sum_probs=25.4

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      ++|.|+ |.-|...|..+++.|.+|+++.+.
T Consensus         6 viIIGg-GpAGl~aA~~aar~G~~V~viE~~   35 (229)
T d3lada1           6 VIVIGA-GPGGYVAAIKSAQLGLKTALIEKY   35 (229)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEecc
Confidence            667777 677999999999999999999753

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=89.32  E-value=0.51  Score=29.43  Aligned_cols=58  Identities=14%  Similarity=0.054  Sum_probs=39.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHH---HhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecC
Q 033624           16 NEKVVMVTGASSGLGREFCLDLA---KAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVC   83 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~---~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~   83 (115)
                      ...++|=.|++.|   ..+..|+   ..+++|+.++.++..++.+.+.+...+       .++.+...|+.
T Consensus        27 ~~~~ILDiGcG~G---~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~-------~~~~f~~~d~~   87 (281)
T d2gh1a1          27 KPVHIVDYGCGYG---YLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP-------YDSEFLEGDAT   87 (281)
T ss_dssp             SCCEEEEETCTTT---HHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSS-------SEEEEEESCTT
T ss_pred             CcCEEEEecCcCC---HHHHHHHHhCCCCCEEEEEecchhHhhhhhccccccc-------ccccccccccc
Confidence            4567888898766   2233343   357889999999888887777776543       35667777764

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=89.31  E-value=0.43  Score=28.27  Aligned_cols=37  Identities=22%  Similarity=0.292  Sum_probs=30.1

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      .++.||+++|.|++ --|.-+|..++..++.+..+.|.
T Consensus        28 ~~~~gK~V~VvG~G-~Sa~dia~~~~~~~~~~~~~~~~   64 (235)
T d1w4xa2          28 VDFSGQRVGVIGTG-SSGIQVSPQIAKQAAELFVFQRT   64 (235)
T ss_dssp             CCCBTCEEEEECCS-HHHHHHHHHHHHHBSEEEEEESS
T ss_pred             CCCCCCEEEEECCC-ccHHHHHHHHHhhhccccccccc
Confidence            35789999999984 44788999999999988777655

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.27  E-value=0.29  Score=28.62  Aligned_cols=33  Identities=9%  Similarity=0.076  Sum_probs=27.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      .+.++|.|+ |..|...|..+++.|.+++++.+.
T Consensus         5 ~~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~   37 (192)
T d1vdca1           5 NTRLCIVGS-GPAAHTAAIYAARAELKPLLFEGW   37 (192)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHHTTCCCEEECCS
T ss_pred             cceEEEECC-CHHHHHHHHHHHHcCCcEEEEEee
Confidence            456888888 678899999999999999888753

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=89.11  E-value=1.1  Score=25.09  Aligned_cols=77  Identities=18%  Similarity=0.201  Sum_probs=45.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHh-CCeEEE-EecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           19 VVMVTGASSGLGREFCLDLAKA-GCRIVA-AARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~-g~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      ++.|.|++|-+|+.+++.+.+. ++.++. +++... ...    +...       ...   +-.|.+ .++.....++.+
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~~----~~~~-------~~D---vvIDFS-~p~~~~~~~~~~   64 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-LSL----LTDG-------NTE---VVIDFT-HPDVVMGNLEFL   64 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-THH----HHTT-------TCS---EEEECC-CTTTHHHHHHHH
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hhh----hccc-------cCC---EEEEcc-cHHHHHHHHHHH
Confidence            4789999999999999987764 455543 344322 111    1111       112   336775 666666666665


Q ss_pred             HHHcCCccEEEeCCccC
Q 033624           97 WEAFGRVDALVNNAGIR  113 (115)
Q Consensus        97 ~~~~~~id~li~naG~~  113 (115)
                      .+.  ++.+++-..|..
T Consensus        65 ~~~--~~~~ViGTTG~~   79 (135)
T d1yl7a1          65 IDN--GIHAVVGTTGFT   79 (135)
T ss_dssp             HHT--TCEEEECCCCCC
T ss_pred             Hhc--CCCEEEeccccc
Confidence            443  466777666654

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=89.04  E-value=0.26  Score=31.09  Aligned_cols=31  Identities=19%  Similarity=0.269  Sum_probs=25.4

Q ss_pred             EEEecCCChHHHHHHHHHHH-----hCCeEEEEeccc
Q 033624           20 VMVTGASSGLGREFCLDLAK-----AGCRIVAAARRV   51 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~-----~g~~v~~~~r~~   51 (115)
                      ++|.|| |-.|..+|..|++     .|.+|+++.+++
T Consensus        10 V~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~   45 (360)
T d1pn0a1          10 VLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRS   45 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCC
Confidence            677777 8889999999974     689999998764

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.01  E-value=0.4  Score=28.26  Aligned_cols=31  Identities=19%  Similarity=0.254  Sum_probs=26.0

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      ++|.|+ |..|...|..+++.|.+|+++.+..
T Consensus         6 viVIG~-GpaGl~aA~~aar~G~kV~vIEk~~   36 (223)
T d1ebda1           6 TLVVGA-GPGGYVAAIRAAQLGQKVTIVEKGN   36 (223)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecCC
Confidence            677776 7779999999999999999997653

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=88.98  E-value=0.28  Score=27.73  Aligned_cols=30  Identities=17%  Similarity=0.290  Sum_probs=24.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      +++|.|+ |.+|..+|..|.+ +.+|.++.+.
T Consensus         2 rVvIIGg-G~~G~e~A~~l~~-~~~Vtvv~~~   31 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLSQ-TYEVTVIDKE   31 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TSEEEEECSS
T ss_pred             eEEEECC-cHHHHHHHHHHHc-CCCEEEEecc
Confidence            5778887 7999999998864 7799888764

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=88.98  E-value=1.7  Score=27.26  Aligned_cols=29  Identities=14%  Similarity=0.040  Sum_probs=20.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCCeEEEE
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGCRIVAA   47 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~~v~~~   47 (115)
                      ..+++.++|.-|.++|..-+..|.+++++
T Consensus        70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~   98 (318)
T d1v71a1          70 AGVLTFSSGNHAQAIALSAKILGIPAKII   98 (318)
T ss_dssp             HCEEECCSSHHHHHHHHHHHHTTCCEEEE
T ss_pred             ceeeeeccchhhHHHHHhhcccccceeec
Confidence            35777777878888887766666654443

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=88.97  E-value=1.1  Score=28.65  Aligned_cols=44  Identities=11%  Similarity=0.134  Sum_probs=31.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhC--CeEEEEecccchHHHHHHHhh
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCDEIN   62 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~   62 (115)
                      ..+.+||.|+++|   .+++++++..  .+|.++..+++-.+-+.+.+.
T Consensus       106 ~pk~VLIiGgG~G---~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~  151 (312)
T d2b2ca1         106 DPKRVLIIGGGDG---GILREVLKHESVEKVTMCEIDEMVIDVAKKFLP  151 (312)
T ss_dssp             SCCEEEEESCTTS---HHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCT
T ss_pred             CCCeEEEeCCCch---HHHHHHHHcCCcceEEEEcccHHHHHHHHhhch
Confidence            3578999999877   5667777754  478888888776665555543

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=88.93  E-value=0.3  Score=31.38  Aligned_cols=29  Identities=24%  Similarity=0.232  Sum_probs=24.5

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEec
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAAR   49 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r   49 (115)
                      ++|.|+ |.-|..+|.+|++.|.+|+++.+
T Consensus        10 vIVVGs-G~aG~v~A~rLaeaG~~VlvLEa   38 (370)
T d3coxa1          10 ALVIGS-GYGGAVAALRLTQAGIPTQIVEM   38 (370)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEeC
Confidence            677776 56688999999999999999875

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=88.93  E-value=1.8  Score=27.56  Aligned_cols=80  Identities=13%  Similarity=0.029  Sum_probs=51.1

Q ss_pred             CCcEEEEecCC-ChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           16 NEKVVMVTGAS-SGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        16 ~~~~~lvtG~~-~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .|+++|=..+. |+++..    ++..|+ +|+.++.+...++.+.+.++..+.    ...++.++..|+.       .++
T Consensus       144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l----~~~~~~~i~~d~~-------~~l  208 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHL----DMANHQLVVMDVF-------DYF  208 (317)
T ss_dssp             BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTC----CCTTEEEEESCHH-------HHH
T ss_pred             CCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcc----cCcceEEEEccHH-------HHH
Confidence            47777766654 444433    445677 689999999888877777664431    1235777888763       134


Q ss_pred             HHHHHHcCCccEEEeCC
Q 033624           94 QKAWEAFGRVDALVNNA  110 (115)
Q Consensus        94 ~~~~~~~~~id~li~na  110 (115)
                      ........+.|++|...
T Consensus       209 ~~~~~~~~~fD~Ii~DP  225 (317)
T d2b78a2         209 KYARRHHLTYDIIIIDP  225 (317)
T ss_dssp             HHHHHTTCCEEEEEECC
T ss_pred             HHHHhhcCCCCEEEEcC
Confidence            44445556899998764

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=88.63  E-value=0.37  Score=28.33  Aligned_cols=35  Identities=14%  Similarity=0.179  Sum_probs=27.0

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHH
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKS   56 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   56 (115)
                      +.|.| .|.+|+.+|..++ .|++|+.++-++...+.
T Consensus         3 I~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~   37 (196)
T d1dlja2           3 IAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDK   37 (196)
T ss_dssp             EEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHH
T ss_pred             EEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHH
Confidence            45566 6999999997664 69999999988765543

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=88.47  E-value=1.4  Score=25.86  Aligned_cols=64  Identities=11%  Similarity=0.223  Sum_probs=40.3

Q ss_pred             HHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHHHcCCccEEEeCCccC
Q 033624           34 CLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        34 a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .+.+++.+.+|++++++++....+.. +.         ..++.++..+.. +   +...+...  ..+++|.++..-|++
T Consensus        33 s~~iL~~~~~viaiD~D~~ai~~a~~-~~---------~~~~~~~~~~f~-~---~~~~l~~~--~~~~vdgIl~DLGvS   96 (182)
T d1wg8a2          33 ARGILERGGRVIGLDQDPEAVARAKG-LH---------LPGLTVVQGNFR-H---LKRHLAAL--GVERVDGILADLGVS   96 (182)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHH-TC---------CTTEEEEESCGG-G---HHHHHHHT--TCSCEEEEEEECSCC
T ss_pred             HHHHhcccCcEEEEhhhhhHHHHHhh-cc---------ccceeEeehHHH-H---HHHHHHHc--CCCccCEEEEEccCC
Confidence            45556667899999999987765443 21         135777777663 2   23222221  235799998887775

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=88.45  E-value=0.48  Score=28.25  Aligned_cols=32  Identities=16%  Similarity=0.166  Sum_probs=25.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHh--CCeEEEEeccc
Q 033624           19 VVMVTGASSGLGREFCLDLAKA--GCRIVAAARRV   51 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~--g~~v~~~~r~~   51 (115)
                      ++.|.|+ |.-|...|..|.+.  |++|.++.+.+
T Consensus         3 kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~   36 (230)
T d1cjca2           3 QICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQL   36 (230)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSS
T ss_pred             eEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            5777877 77899999999876  67899887764

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.32  E-value=0.36  Score=31.63  Aligned_cols=32  Identities=19%  Similarity=0.264  Sum_probs=26.6

Q ss_pred             EEEEecCCChHHHHHHHHHHH------hCCeEEEEeccc
Q 033624           19 VVMVTGASSGLGREFCLDLAK------AGCRIVAAARRV   51 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~------~g~~v~~~~r~~   51 (115)
                      =++|.|| |.-|...|..|++      .|.+|+++.+..
T Consensus        34 DViIVGg-GPAGlsaA~~LA~l~~~~~~Gl~VlllEK~~   71 (380)
T d2gmha1          34 DVVIVGA-GPAGLSAATRLKQLAAQHEKDLRVCLVEKAA   71 (380)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHHHHTTCCCCEEEECSSS
T ss_pred             CEEEECC-CHHHHHHHHHHHhhhhhhcCCCEEEEEcCCC
Confidence            3788887 7778999999987      799999998763

>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=88.22  E-value=0.45  Score=29.10  Aligned_cols=30  Identities=13%  Similarity=0.252  Sum_probs=25.6

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      ++|.|+ |.-|...|.++++.|.+|.++.+.
T Consensus         4 viVIG~-G~aG~~aA~~aa~~G~~V~liE~~   33 (259)
T d1onfa1           4 LIVIGG-GSGGMAAARRAARHNAKVALVEKS   33 (259)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCeEEEEecC
Confidence            567777 566999999999999999999875

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=88.20  E-value=0.83  Score=27.32  Aligned_cols=47  Identities=21%  Similarity=0.311  Sum_probs=32.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhC
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINK   63 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~   63 (115)
                      .|.++|=.|++.|.-......+...| +|+.++.++..++.+.+..+.
T Consensus        56 pg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~  102 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRE  102 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhc
Confidence            47899999998774333333333334 899999999888777665544

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=87.96  E-value=0.67  Score=25.16  Aligned_cols=33  Identities=21%  Similarity=0.363  Sum_probs=27.5

Q ss_pred             cEEEEecCC---ChHHHHHHHHHHHhCCeEEEEecc
Q 033624           18 KVVMVTGAS---SGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        18 ~~~lvtG~~---~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      |.+.|.|++   +..|..+.+.|.+.|++|+.+..+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~   37 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPN   37 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccc
Confidence            578899987   468999999999999998877544

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.77  E-value=0.74  Score=28.34  Aligned_cols=34  Identities=21%  Similarity=0.361  Sum_probs=28.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHH-hCCeEEEEe
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAK-AGCRIVAAA   48 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~-~g~~v~~~~   48 (115)
                      .+.|++++|-|- |-+|..+++.|.+ .|++|+.++
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vs   63 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVS   63 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecc
Confidence            478999999988 7799999999986 588887654

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.73  E-value=0.79  Score=28.55  Aligned_cols=42  Identities=17%  Similarity=0.131  Sum_probs=32.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHh
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~   61 (115)
                      ++++|=.|++.|   .++..|+++|++|+.++.+++.++.+.+..
T Consensus        57 ~~~vLD~GcG~G---~~~~~la~~g~~v~gvD~S~~ml~~A~~~~   98 (292)
T d1xvaa_          57 CHRVLDVACGTG---VDSIMLVEEGFSVTSVDASDKMLKYALKER   98 (292)
T ss_dssp             CCEEEESSCTTS---HHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCEEEEecCCCc---HHHHHHHHcCCeeeeccCchHHHHHHHHHH
Confidence            678999999877   356667888999999999988776655443

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=87.71  E-value=1.2  Score=24.04  Aligned_cols=80  Identities=13%  Similarity=0.064  Sum_probs=47.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHH
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAW   97 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~   97 (115)
                      .++||.=-...+...+...|.+.|++|..+....    ++.+.+++.         ..-.+-+|+.-+..+=-.++.+++
T Consensus         4 ~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~~----~a~~~l~~~---------~~dlii~D~~mp~~~G~el~~~l~   70 (123)
T d1krwa_           4 GIVWVVDDDSSIRWVLERALAGAGLTCTTFENGN----EVLAALASK---------TPDVLLSDIRMPGMDGLALLKQIK   70 (123)
T ss_dssp             CEEEEESSSHHHHHHHHHHHHHTTCEEEEESSSH----HHHHHHTTC---------CCSEEEECCSSSSSTTHHHHHHHH
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCHH----HHHHHHHhC---------CCCEEEehhhcCCchHHHHHHHHH
Confidence            4688888877888888888888999988654333    334444432         122344454322222233566666


Q ss_pred             HHcCCccEEEeCC
Q 033624           98 EAFGRVDALVNNA  110 (115)
Q Consensus        98 ~~~~~id~li~na  110 (115)
                      +..+.+-+++..+
T Consensus        71 ~~~~~~piI~~t~   83 (123)
T d1krwa_          71 QRHPMLPVIIMTA   83 (123)
T ss_dssp             HHSSSCCEEESCC
T ss_pred             HhCCCCeEEEEec
Confidence            6677777766543

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=87.46  E-value=1.6  Score=25.31  Aligned_cols=77  Identities=9%  Similarity=-0.028  Sum_probs=43.9

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      +.+.++|=.++++|   ++..+.+.+|+ +|+.++.+....+.+.+.++...      ..+...+..|+          +
T Consensus        42 ~~~~~vLDlfaGsG---~~giealsrGa~~v~~VE~~~~a~~~~k~N~~~~~------~~~~~ii~~d~----------~  102 (183)
T d2fpoa1          42 IVDAQCLDCFAGSG---ALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLK------AGNARVVNSNA----------M  102 (183)
T ss_dssp             HTTCEEEETTCTTC---HHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTT------CCSEEEECSCH----------H
T ss_pred             cchhhhhhhhcccc---ceeeeEEecCcceeEEEEEeechhhHHHHHHhhcc------ccceeeeeecc----------c
Confidence            35666665665444   33334556787 69999999888877776665432      12344455543          2


Q ss_pred             HHHHHHcCCccEEEeCC
Q 033624           94 QKAWEAFGRVDALVNNA  110 (115)
Q Consensus        94 ~~~~~~~~~id~li~na  110 (115)
                      +.+.....+.|+++..-
T Consensus       103 ~~l~~~~~~fDlIf~DP  119 (183)
T d2fpoa1         103 SFLAQKGTPHNIVFVDP  119 (183)
T ss_dssp             HHHSSCCCCEEEEEECC
T ss_pred             ccccccccccCEEEEcC
Confidence            22222334677777653

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=87.44  E-value=0.71  Score=26.19  Aligned_cols=33  Identities=15%  Similarity=0.078  Sum_probs=24.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhC----CeEEEEecc
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAG----CRIVAAARR   50 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g----~~v~~~~r~   50 (115)
                      +++-|.|++|-.|+.+.+.|+++.    ..+....++
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss   38 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTS   38 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecc
Confidence            357788999999999999888753    235555444

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=87.43  E-value=0.89  Score=27.12  Aligned_cols=44  Identities=11%  Similarity=0.166  Sum_probs=33.8

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHh
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~   61 (115)
                      +.++.+|=.|++.|   .+++.|++.|++|+.++.+++..+.+.+..
T Consensus        19 ~~~~~VLDiGcG~G---~~~~~l~~~g~~v~giD~s~~~i~~a~~~~   62 (225)
T d2p7ia1          19 FRPGNLLELGSFKG---DFTSRLQEHFNDITCVEASEEAISHAQGRL   62 (225)
T ss_dssp             CCSSCEEEESCTTS---HHHHHHTTTCSCEEEEESCHHHHHHHHHHS
T ss_pred             CCCCcEEEEeCCCc---HHHHHHHHcCCeEEEEeCcHHHhhhhhccc
Confidence            34677888998877   456678888999999999987776665543

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.34  E-value=0.41  Score=28.61  Aligned_cols=29  Identities=14%  Similarity=0.182  Sum_probs=24.9

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEec
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAAR   49 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r   49 (115)
                      ++|.|+ |.-|...|..+++.|.+|+++..
T Consensus         6 viVIG~-GpaGl~aA~~aa~~G~kV~viE~   34 (235)
T d1h6va1           6 LIIIGG-GSGGLAAAKEAAKFDKKVMVLDF   34 (235)
T ss_dssp             EEEECC-SHHHHHHHHHHGGGCCCEEEECC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCeEEEEec
Confidence            677777 66699999999999999999974

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.15  E-value=0.84  Score=27.97  Aligned_cols=34  Identities=26%  Similarity=0.419  Sum_probs=28.2

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHH-hCCeEEEEe
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAK-AGCRIVAAA   48 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~-~g~~v~~~~   48 (115)
                      ++.++++.|-| .|-+|..+++.|.+ .|++|+.++
T Consensus        28 ~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          28 DPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            57899988876 48999999999975 699988765

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=87.15  E-value=2  Score=26.01  Aligned_cols=85  Identities=18%  Similarity=0.144  Sum_probs=54.3

Q ss_pred             CCcEEEEecCCChHHH-HHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGR-EFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQ   94 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~-~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~   94 (115)
                      ..+++|=+|...|... .+++.+- .+.+|+.+..+++....+.+.++..+     ...++..+..|.   .+.+..+..
T Consensus        59 ~~k~iLEiGT~~GyStl~la~al~-~~g~v~tie~~~~~~~~A~~~~~~~g-----~~~~i~~~~g~a---~~~L~~l~~  129 (227)
T d1susa1          59 NAKNTMEIGVYTGYSLLATALAIP-EDGKILAMDINKENYELGLPVIKKAG-----VDHKIDFREGPA---LPVLDEMIK  129 (227)
T ss_dssp             TCCEEEEECCGGGHHHHHHHHHSC-TTCEEEEEESCCHHHHHHHHHHHHTT-----CGGGEEEEESCH---HHHHHHHHH
T ss_pred             CCCcEEEecchhhhhHHHHHhhCC-CCcEEEEEeccchhHHHHHHHHHHhc-----cccceeeeehHH---HHHHHHHHh
Confidence            4678999998766443 4555553 46699999999988888888887654     234577666654   233333332


Q ss_pred             HHHHHcCCccEEEeCC
Q 033624           95 KAWEAFGRVDALVNNA  110 (115)
Q Consensus        95 ~~~~~~~~id~li~na  110 (115)
                      . ....+.+|.++..|
T Consensus       130 ~-~~~~~~fD~iFiDa  144 (227)
T d1susa1         130 D-EKNHGSYDFIFVDA  144 (227)
T ss_dssp             C-GGGTTCBSEEEECS
T ss_pred             c-cccCCceeEEEecc
Confidence            1 11245788887765

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=86.77  E-value=0.8  Score=25.70  Aligned_cols=86  Identities=12%  Similarity=0.075  Sum_probs=50.1

Q ss_pred             CCcEEEEecCC---ChHHHHHHHHHHHhCCeEEEEecccchHH--HHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHH
Q 033624           16 NEKVVMVTGAS---SGLGREFCLDLAKAGCRIVAAARRVDRLK--SLCDEINKPGMVGSPDSVRAVAVELDVCADGATIE   90 (115)
Q Consensus        16 ~~~~~lvtG~~---~giG~~~a~~l~~~g~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~   90 (115)
                      ..|.+.|.|++   +..|..+.+.|.+.|++|+.+..+.....  .....+....     ....+    +++...++.+.
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp-----~~iD~----v~i~vp~~~~~   88 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIP-----DKIEV----VDLFVKPKLTM   88 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCS-----SCCSE----EEECSCHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccC-----ccceE----EEEEeCHHHHH
Confidence            36789999987   57999999999999999888755432111  0111111110     01112    12223667777


Q ss_pred             HHHHHHHHHcCCccEEEeCCcc
Q 033624           91 ISVQKAWEAFGRVDALVNNAGI  112 (115)
Q Consensus        91 ~~~~~~~~~~~~id~li~naG~  112 (115)
                      .+++++.+.  .+..++...|.
T Consensus        89 ~~~~e~~~~--g~k~v~~~~G~  108 (139)
T d2d59a1          89 EYVEQAIKK--GAKVVWFQYNT  108 (139)
T ss_dssp             HHHHHHHHH--TCSEEEECTTC
T ss_pred             HHHHHHHHh--CCCEEEEeccc
Confidence            777776654  24555555554

>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Azotobacter vinelandii [TaxId: 354]

Probab=86.77  E-value=0.31  Score=30.44  Aligned_cols=33  Identities=18%  Similarity=0.423  Sum_probs=25.4

Q ss_pred             cEEEEecCCChHHHH-----HHHHHHHhCCeEEEEeccc
Q 033624           18 KVVMVTGASSGLGRE-----FCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        18 ~~~lvtG~~~giG~~-----~a~~l~~~g~~v~~~~r~~   51 (115)
                      |++.|.| -||.|+.     +|..|++.|.+|.+++-++
T Consensus         3 r~Iaisg-KGGVGKTT~a~NLA~~LA~~G~rVLlID~Dp   40 (289)
T d2afhe1           3 RQCAIYG-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDP   40 (289)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             cEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEEEecCC
Confidence            4567776 6777764     5778899999999998764

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.77  E-value=2.5  Score=26.64  Aligned_cols=60  Identities=18%  Similarity=0.272  Sum_probs=36.9

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecC
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVC   83 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~   83 (115)
                      ..|+++|-.|++.|+   ++..+++.|+ +|+.++.++. ...+.+.++..+     ...++.++..|+.
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~-----~~~~v~~~~~~~~   92 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANK-----LDHVVTIIKGKVE   92 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTT-----CTTTEEEEESCTT
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhC-----CccccceEeccHH
Confidence            368999999998774   4556677786 5888887653 344444333322     1234666666553

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=86.49  E-value=1.6  Score=26.92  Aligned_cols=60  Identities=15%  Similarity=-0.030  Sum_probs=38.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHh-CCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecC
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVC   83 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~   83 (115)
                      .+.++|=.|++.|   .++..|+++ |++|+.++.++...+.+.+.....+     -..++.++.+|..
T Consensus        67 ~~~~vLDiGcG~G---~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~g-----l~~~v~~~~~d~~  127 (282)
T d2o57a1          67 RQAKGLDLGAGYG---GAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAG-----LADNITVKYGSFL  127 (282)
T ss_dssp             TTCEEEEETCTTS---HHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHT-----CTTTEEEEECCTT
T ss_pred             CCCEEEEeCCCCc---HHHhhhhccCCcEEEEEeccchhhhhhhccccccc-----ccccccccccccc
Confidence            4778999998766   244555554 8899999988877666555544322     1134556666653

>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.09  E-value=1.2  Score=25.46  Aligned_cols=36  Identities=17%  Similarity=0.299  Sum_probs=31.8

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      ++|.++++.|..+.+..+.+..+...|.++.+++..
T Consensus         2 l~gl~Ia~VGD~~nv~~Sli~~l~~~g~~v~~~~P~   37 (163)
T d1pvva2           2 IKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPE   37 (163)
T ss_dssp             CTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEeccc
Confidence            679999999998889899999999999999988653

>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=86.02  E-value=0.72  Score=28.19  Aligned_cols=31  Identities=23%  Similarity=0.206  Sum_probs=26.5

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      ++|.|+ |..|...|..+++.|.+|+++.+..
T Consensus        45 vvVIGg-G~aG~~aA~~~a~~G~kv~vve~~~   75 (261)
T d1mo9a1          45 AIFIGG-GAAGRFGSAYLRAMGGRQLIVDRWP   75 (261)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence            777777 6789999999999999999988753

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=85.77  E-value=0.89  Score=26.41  Aligned_cols=31  Identities=26%  Similarity=0.181  Sum_probs=24.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHhC--CeEEEEecc
Q 033624           19 VVMVTGASSGLGREFCLDLAKAG--CRIVAAARR   50 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g--~~v~~~~r~   50 (115)
                      +++|.|+ |.+|..+|..|.+.+  .+|+++.++
T Consensus         2 KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~   34 (198)
T d1nhpa1           2 KVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKG   34 (198)
T ss_dssp             EEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESS
T ss_pred             EEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence            4788887 689999999999874  468887764

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=85.64  E-value=1.2  Score=27.88  Aligned_cols=76  Identities=13%  Similarity=0.142  Sum_probs=50.1

Q ss_pred             CcEEEEecC-CChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           17 EKVVMVTGA-SSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        17 ~~~~lvtG~-~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      +..++=.|+ +|.|+.+++..+  ...+|++++.++..++-+.+..+..+      -.++.++..|+. +.         
T Consensus       109 ~~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~------~~~v~~~~~d~~-~~---------  170 (274)
T d2b3ta1         109 PCRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLA------IKNIHILQSDWF-SA---------  170 (274)
T ss_dssp             CCEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHT------CCSEEEECCSTT-GG---------
T ss_pred             ccceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhC------cccceeeecccc-cc---------
Confidence            344666665 455777766543  35689999999988877776665433      125888888875 21         


Q ss_pred             HHHHcCCccEEEeCCcc
Q 033624           96 AWEAFGRVDALVNNAGI  112 (115)
Q Consensus        96 ~~~~~~~id~li~naG~  112 (115)
                      +  ...++|++|.|--+
T Consensus       171 ~--~~~~fDlIvsNPPY  185 (274)
T d2b3ta1         171 L--AGQQFAMIVSNPPY  185 (274)
T ss_dssp             G--TTCCEEEEEECCCC
T ss_pred             c--CCCceeEEEecchh
Confidence            0  12479999999654

>d2ax3a2 c.104.1.1 (A:1-211) Hypothetical protein TM0922, N-terminal domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: YjeF N-terminal domain-like
superfamily: YjeF N-terminal domain-like
family: YjeF N-terminal domain-like
domain: Hypothetical protein TM0922, N-terminal domain
species: Thermotoga maritima [TaxId: 2336]

Probab=85.61  E-value=0.64  Score=28.00  Aligned_cols=33  Identities=12%  Similarity=0.137  Sum_probs=25.8

Q ss_pred             CcEEEEecCC--ChHHHHHHHHHHHhCCeEEEEec
Q 033624           17 EKVVMVTGAS--SGLGREFCLDLAKAGCRIVAAAR   49 (115)
Q Consensus        17 ~~~~lvtG~~--~giG~~~a~~l~~~g~~v~~~~r   49 (115)
                      .+.+++.|.+  ||=|..+|+.|.++|++|.++..
T Consensus        41 ~~vlvl~G~GNNGGDGl~~Ar~L~~~g~~V~v~~~   75 (211)
T d2ax3a2          41 YRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFL   75 (211)
T ss_dssp             CEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEEC
T ss_pred             CcEEEEECCCCCchhHHHHHHHHHhcCCeeEEEec
Confidence            4566667753  68999999999999999876654

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=85.59  E-value=0.71  Score=26.21  Aligned_cols=25  Identities=24%  Similarity=0.322  Sum_probs=22.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCC
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGC   42 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~   42 (115)
                      -++-|.|++|..|..+.+.|.++.+
T Consensus         2 ~kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           2 YTVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHcCCC
Confidence            4688999999999999999988864

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=85.50  E-value=2.7  Score=25.85  Aligned_cols=62  Identities=18%  Similarity=0.192  Sum_probs=42.7

Q ss_pred             CCcEEEEecCCCh-HHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecC
Q 033624           16 NEKVVMVTGASSG-LGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVC   83 (115)
Q Consensus        16 ~~~~~lvtG~~~g-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~   83 (115)
                      .|.+++=.|+++| +...+++.+.. +.+|+.++++++..+.+.+.++..+     ...++.+...|+.
T Consensus        85 pG~rVLEiG~GsG~lt~~la~~v~~-~g~V~~vD~~e~~~~~A~~n~~~~~-----~~~nv~~~~~Di~  147 (250)
T d1yb2a1          85 PGMDILEVGVGSGNMSSYILYALNG-KGTLTVVERDEDNLKKAMDNLSEFY-----DIGNVRTSRSDIA  147 (250)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHTT-SSEEEEECSCHHHHHHHHHHHHTTS-----CCTTEEEECSCTT
T ss_pred             CcCEEEEeeeeCcHHHHHHHHHhCC-CcEEEEEECCHHHHHHHHHHHHHhc-----CCCceEEEEeeee
Confidence            4788998998665 45555655433 4589999999998888888887543     1234666666664

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=85.40  E-value=2.3  Score=26.55  Aligned_cols=79  Identities=14%  Similarity=0.088  Sum_probs=44.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHh-C-CeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKA-G-CRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~-g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      ..+.+||.|+++|   .+++++++. + .+|.++..+++-.+-+.+.+....  ......++..+..|-.          
T Consensus        75 ~p~~vLiiGgG~G---~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~--~~~~d~r~~i~~~D~~----------  139 (274)
T d1iy9a_          75 NPEHVLVVGGGDG---GVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIA--GKLDDPRVDVQVDDGF----------  139 (274)
T ss_dssp             SCCEEEEESCTTC---HHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHH--TTTTSTTEEEEESCSH----------
T ss_pred             CcceEEecCCCCc---HHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhc--ccccCCCeEEEechHH----------
Confidence            3578999999877   456666664 3 478888888776665554442110  0111245666665542          


Q ss_pred             HHHHHHcCCccEEEeC
Q 033624           94 QKAWEAFGRVDALVNN  109 (115)
Q Consensus        94 ~~~~~~~~~id~li~n  109 (115)
                      ..+.+...+.|++|.-
T Consensus       140 ~~l~~~~~~yDvIi~D  155 (274)
T d1iy9a_         140 MHIAKSENQYDVIMVD  155 (274)
T ss_dssp             HHHHTCCSCEEEEEES
T ss_pred             HHHhhcCCCCCEEEEc
Confidence            2222233457777654

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.40  E-value=0.96  Score=27.15  Aligned_cols=61  Identities=16%  Similarity=0.173  Sum_probs=39.9

Q ss_pred             CCcEEEEecCCChHHH-HHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeec
Q 033624           16 NEKVVMVTGASSGLGR-EFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDV   82 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~-~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di   82 (115)
                      ..++++=+|...|... .+++.+ ..+.+|+.++.++...+.+...++..+     ...++..+..|.
T Consensus        56 kpk~ILEiGt~~G~Sti~la~al-~~~g~v~sid~~~~~~~~a~~~~~~~g-----l~~~i~l~~Gd~  117 (214)
T d2cl5a1          56 SPSLVLELGAYCGYSAVRMARLL-QPGARLLTMEMNPDYAAITQQMLNFAG-----LQDKVTILNGAS  117 (214)
T ss_dssp             CCSEEEEECCTTSHHHHHHHTTC-CTTCEEEEEESCHHHHHHHHHHHHHHT-----CGGGEEEEESCH
T ss_pred             CCCEEEEEccCchhHHHHHHHhC-CCccEEEEEeccHHHHHHHHHHHHHcC-----CCccceeeeccc
Confidence            4578999998766443 233222 346799999998887777776666543     124577777654

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=85.14  E-value=0.82  Score=23.13  Aligned_cols=34  Identities=24%  Similarity=0.233  Sum_probs=28.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   52 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~   52 (115)
                      |++.|.|+ |=+|+.++..-.+.|.++++.+.+..
T Consensus         2 k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~   35 (78)
T d3etja2           2 KQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAE   35 (78)
T ss_dssp             EEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence            56778887 77999999999999999999886544

>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}

class: Alpha and beta proteins (a/b)
fold: PEP carboxykinase-like
superfamily: PEP carboxykinase-like
family: HPr kinase HprK C-terminal domain
domain: HPr kinase HprK C-terminal domain
species: Staphylococcus xylosus [TaxId: 1288]

Probab=85.02  E-value=0.43  Score=27.88  Aligned_cols=31  Identities=42%  Similarity=0.704  Sum_probs=24.6

Q ss_pred             CCCCcEEEEecCCChHHHH-HHHHHHHhCCeEE
Q 033624           14 DLNEKVVMVTGASSGLGRE-FCLDLAKAGCRIV   45 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~-~a~~l~~~g~~v~   45 (115)
                      ...|+.++++|. +|.|++ ++.+|.++|++++
T Consensus        12 ~~~g~gvli~G~-sg~GKS~la~~l~~~g~~li   43 (169)
T d1ko7a2          12 DVYGVGVLITGD-SGIGKSETALELIKRGHRLV   43 (169)
T ss_dssp             EETTEEEEEEES-TTSSHHHHHHHHHHTTCEEE
T ss_pred             EECCEEEEEEeC-CCCCHHHHHHHHHHcCCeEE
Confidence            456888999988 667885 8889999998744

>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain
species: Fungus (Phanerochaete chrysosporium) [TaxId: 5306]

Probab=84.90  E-value=0.68  Score=29.81  Aligned_cols=29  Identities=24%  Similarity=0.297  Sum_probs=23.7

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEec
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAAR   49 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r   49 (115)
                      ++|.|+ |.-|..+|.+|++.|.+|+++-+
T Consensus         5 ~IIVGs-G~aG~v~A~rLae~g~~VlvLEa   33 (360)
T d1kdga1           5 YIIVGA-GPGGIIAADRLSEAGKKVLLLER   33 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECS
T ss_pred             EEEECc-CHHHHHHHHHHhhCCCeEEEEEc
Confidence            677777 45588899999999999999854

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=84.82  E-value=0.76  Score=26.69  Aligned_cols=28  Identities=25%  Similarity=0.288  Sum_probs=23.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHh-CCeEEE
Q 033624           19 VVMVTGASSGLGREFCLDLAKA-GCRIVA   46 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~-g~~v~~   46 (115)
                      ++.|.|++|..|..+.+.|..+ ...+..
T Consensus         3 kVaIiGATGyvG~eLlrlL~~HP~~ei~~   31 (179)
T d2g17a1           3 NTLIVGASGYAGAELVSYVNRHPHMTITA   31 (179)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTEEEEE
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCCceEe
Confidence            5889999999999999999997 445543

>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.73  E-value=0.75  Score=28.87  Aligned_cols=34  Identities=21%  Similarity=0.255  Sum_probs=27.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHh--CCeEEEEeccc
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKA--GCRIVAAARRV   51 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~--g~~v~~~~r~~   51 (115)
                      ..-++|.|+ |.-|...|..|+++  |++|.++.++.
T Consensus        50 ~~~~~~~g~-g~~g~~~a~~~~~~~~~~~~~~~~~~~   85 (311)
T d2gjca1          50 VSDVIIVGA-GSSGLSAAYVIAKNRPDLKVCIIESSV   85 (311)
T ss_dssp             EESEEEECC-SHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHhCCCCeEEEEEcCC
Confidence            345788887 77799999999976  89999998764

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=84.69  E-value=1.4  Score=28.03  Aligned_cols=43  Identities=14%  Similarity=0.143  Sum_probs=29.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHh--CCeEEEEecccchHHHHHHHh
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKA--GCRIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~~   61 (115)
                      ..+.+||.|+++|   .+++++++.  ..+|.++..+++-.+-+.+.+
T Consensus        77 ~pk~VLiiG~G~G---~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f  121 (312)
T d1uira_          77 EPKRVLIVGGGEG---ATLREVLKHPTVEKAVMVDIDGELVEVAKRHM  121 (312)
T ss_dssp             CCCEEEEEECTTS---HHHHHHTTSTTCCEEEEEESCHHHHHHHHHHC
T ss_pred             CcceEEEeCCCch---HHHHHHHhcCCcceEEEecCCHHHHHHHHhcC
Confidence            3578999998776   445556554  347888888877665554443

>d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=84.67  E-value=2  Score=25.55  Aligned_cols=38  Identities=24%  Similarity=0.302  Sum_probs=28.3

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHH--------------------HhCC-eEEEEeccc
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLA--------------------KAGC-RIVAAARRV   51 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~--------------------~~g~-~v~~~~r~~   51 (115)
                      ..+.+++++|.|+ |-.+.-+|+.++                    +.|+ +|.+++|..
T Consensus        35 ~~~~gk~VvVIGg-GNvAlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RRg   93 (216)
T d1lqta1          35 PDLSGARAVVIGN-GNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRG   93 (216)
T ss_dssp             CCCCSSEEEEECC-SHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSC
T ss_pred             ccccCceEEEECC-CchhHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEECC
Confidence            3567999999998 666677777666                    5666 599998864

>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Succinate dehydogenase
species: Escherichia coli [TaxId: 562]

Probab=84.47  E-value=0.5  Score=30.00  Aligned_cols=30  Identities=23%  Similarity=0.408  Sum_probs=25.3

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEecc
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      ++|.|+ |.-|...|.+++++|.+|+++...
T Consensus        10 VlVVG~-G~AGl~AAl~aa~~G~~V~lleK~   39 (330)
T d1neka2          10 AVVIGA-GGAGMRAALQISQSGQTCALLSKV   39 (330)
T ss_dssp             CEEECC-SHHHHHHHHHHHHTTCCCEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCeEEEEeCC
Confidence            677777 777899999999999999998753

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=84.39  E-value=0.62  Score=27.61  Aligned_cols=32  Identities=13%  Similarity=-0.001  Sum_probs=26.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHhC-------CeEEEEeccc
Q 033624           19 VVMVTGASSGLGREFCLDLAKAG-------CRIVAAARRV   51 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g-------~~v~~~~r~~   51 (115)
                      ++.|.|+ |.-|++.|..|+++|       ++|.+..+.+
T Consensus         4 ~VaVIGa-GpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~   42 (239)
T d1lqta2           4 YIAIVGS-GPSAFFAAASLLKAADTTEDLDMAVDMLEMLP   42 (239)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred             EEEEECc-CHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence            6788887 778999999999988       4688887753

>d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=84.25  E-value=1.8  Score=25.94  Aligned_cols=38  Identities=16%  Similarity=0.206  Sum_probs=29.8

Q ss_pred             CCCCCcEEEEecCCChHHHHHHHHHHH--------------------hCC-eEEEEeccc
Q 033624           13 HDLNEKVVMVTGASSGLGREFCLDLAK--------------------AGC-RIVAAARRV   51 (115)
Q Consensus        13 ~~~~~~~~lvtG~~~giG~~~a~~l~~--------------------~g~-~v~~~~r~~   51 (115)
                      .++.+++++|.|+ |-.+.-+|+.+++                    .|+ +|.+++|+.
T Consensus        35 ~~~~gk~VvVIGg-GNVAlD~aR~l~r~~~~l~~tdi~~~~l~~l~~~g~~~V~iv~RRg   93 (225)
T d1cjca1          35 PDLSCDTAVILGQ-GNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRG   93 (225)
T ss_dssp             CCTTSSEEEEESC-SHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSC
T ss_pred             ccccCceEEEECC-chhHHHHHHHHhcCHHhhcCCCCcHHHHHHHhccCCCeEEEEEEcC
Confidence            4567999999988 6778888888877                    365 699998864

>d1jzta_ c.104.1.1 (A:) Hypothetical protein YNL200c (YNU0_YEAST) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: YjeF N-terminal domain-like
superfamily: YjeF N-terminal domain-like
family: YjeF N-terminal domain-like
domain: Hypothetical protein YNL200c (YNU0 YEAST)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.77  E-value=0.92  Score=27.93  Aligned_cols=33  Identities=21%  Similarity=0.233  Sum_probs=25.8

Q ss_pred             CcEEEEecC--CChHHHHHHHHHHHhCCeEEEEec
Q 033624           17 EKVVMVTGA--SSGLGREFCLDLAKAGCRIVAAAR   49 (115)
Q Consensus        17 ~~~~lvtG~--~~giG~~~a~~l~~~g~~v~~~~r   49 (115)
                      .+.+++.|.  +||=|..+|+.|.+.|++|.++..
T Consensus        56 ~~vlil~G~GNNGGDGl~~Ar~L~~~G~~V~v~~~   90 (243)
T d1jzta_          56 KHVFVIAGPGNNGGDGLVCARHLKLFGYNPVVFYP   90 (243)
T ss_dssp             CEEEEEECSSHHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred             CeEEEEECCCCccHHHHHHHHHHHhcCCeeEEEEe
Confidence            346666764  478999999999999999876654

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=83.66  E-value=3  Score=24.93  Aligned_cols=60  Identities=17%  Similarity=0.085  Sum_probs=40.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHH-hCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecC
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAK-AGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVC   83 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~   83 (115)
                      .|.++|=.|++.|   .++..|++ .|++|+.++.++...+...+.....+     ...++.+...|+.
T Consensus        33 pg~~VLDiGCG~G---~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~g-----l~~~v~~~~~d~~   93 (245)
T d1nkva_          33 PGTRILDLGSGSG---EMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELG-----VSERVHFIHNDAA   93 (245)
T ss_dssp             TTCEEEEETCTTC---HHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTT-----CTTTEEEEESCCT
T ss_pred             CCCEEEEEcCCCC---HHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhh-----ccccchhhhhHHh
Confidence            4788888998766   23445555 48899999998887776666554433     1235777777764

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.59  E-value=1.3  Score=24.88  Aligned_cols=31  Identities=26%  Similarity=0.281  Sum_probs=24.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHhC---CeEEEEec
Q 033624           19 VVMVTGASSGLGREFCLDLAKAG---CRIVAAAR   49 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g---~~v~~~~r   49 (115)
                      ++-|.|++|..|..+.+.|.+++   .++..+..
T Consensus         4 nVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s   37 (144)
T d2hjsa1           4 NVAVVGATGSVGEALVGLLDERDFPLHRLHLLAS   37 (144)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCCceEEEEEee
Confidence            48899999999999999998654   34555443

>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, alpha chain
species: Azotobacter vinelandii [TaxId: 354]

Probab=83.42  E-value=3.7  Score=27.62  Aligned_cols=80  Identities=18%  Similarity=0.130  Sum_probs=46.6

Q ss_pred             CCCCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHH
Q 033624           14 DLNEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISV   93 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~   93 (115)
                      .+.||++.|.++. .....+++.|.+.|..|+.++-.....+...+.++...       ... .+.-|.  +...+...+
T Consensus       342 ~l~Gkrv~i~~~~-~~~~~l~~~l~elGmevv~~~~~~~~~~d~~~~~~~~~-------~~~-~i~~d~--~~~el~~~i  410 (477)
T d1m1na_         342 RLEGKRVMLYIGG-LRPRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKEMG-------DST-LLYDDV--TGYEFEEFV  410 (477)
T ss_dssp             HHTTCEEEECBSS-SHHHHTHHHHHTTTCEEEEEEESSCCHHHHHTTTTTSC-------TTC-EEEESC--BHHHHHHHH
T ss_pred             hhcCCcEEEecCc-hhHHHHHHHHHHCCCEEEEEeecCCChHHHHHHHHhcC-------CCc-EEecCC--CHHHHHHHH
Confidence            3578888887764 56778888888999998877654433332222222211       111 122233  455566656


Q ss_pred             HHHHHHcCCccEEEeC
Q 033624           94 QKAWEAFGRVDALVNN  109 (115)
Q Consensus        94 ~~~~~~~~~id~li~n  109 (115)
                      .+.     ++|++|-+
T Consensus       411 ~~~-----~pDL~ig~  421 (477)
T d1m1na_         411 KRI-----KPDLIGSG  421 (477)
T ss_dssp             HHH-----CCSEEEEC
T ss_pred             Hhc-----CCCEEEEC
Confidence            554     67888765

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=83.35  E-value=1.5  Score=25.96  Aligned_cols=49  Identities=12%  Similarity=0.117  Sum_probs=35.3

Q ss_pred             CCcEEEEecCCCh-HHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCC
Q 033624           16 NEKVVMVTGASSG-LGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKP   64 (115)
Q Consensus        16 ~~~~~lvtG~~~g-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~   64 (115)
                      .+.++|=.|++.| +...+++.+...+++|+.++.+++-++.+.+.++..
T Consensus        39 ~~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~   88 (225)
T d1im8a_          39 ADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAY   88 (225)
T ss_dssp             TTCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhh
Confidence            4678999998766 344455544446889999999998888877766543

>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Nucleotide excision repair enzyme UvrB
species: Bacillus caldotenax [TaxId: 1395]

Probab=83.33  E-value=2.8  Score=24.36  Aligned_cols=61  Identities=13%  Similarity=0.167  Sum_probs=45.1

Q ss_pred             HHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHHHHHcCCccEEEeC
Q 033624           38 AKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKAWEAFGRVDALVNN  109 (115)
Q Consensus        38 ~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~~~~~~~id~li~n  109 (115)
                      .+.+.++++...+....+.+...++..+       ..+..+..++.  ...-...+++.+.  |.+++||..
T Consensus        28 ~~~~~~~iif~~~~~~~~~~~~~l~~~g-------~~~~~~hg~~~--~~eR~~~l~~Fr~--g~~~vLVaT   88 (181)
T d1t5la2          28 VERNERTLVTTLTKKMAEDLTDYLKEAG-------IKVAYLHSEIK--TLERIEIIRDLRL--GKYDVLVGI   88 (181)
T ss_dssp             HHTTCEEEEECSSHHHHHHHHHHHHTTT-------CCEEEECSSCC--HHHHHHHHHHHHH--TSCSEEEES
T ss_pred             HhcCCeEEEEeehhhhhHHHHHHHHhCC-------cceeEecCCcc--HHHHHHHHHHHHC--CCCCEEEeh
Confidence            3467788888888888888888888765       67888899983  4445555665543  578888876

>d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Methyltransferase 10 domain
domain: Methyltransferase 10 domain containing protein METT10D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.93  E-value=1.6  Score=26.74  Aligned_cols=84  Identities=12%  Similarity=-0.077  Sum_probs=52.6

Q ss_pred             CcEEEEecC-CChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHH
Q 033624           17 EKVVMVTGA-SSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQK   95 (115)
Q Consensus        17 ~~~~lvtG~-~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~   95 (115)
                      ...++=.|. +|.|+..++.++  .+++++.++.+++.++-+.+-++...     -..++..+..+..+.      ++..
T Consensus        62 ~~~~LDiGtGsg~I~~~l~~~~--~~~~~~~~Di~~~al~~A~~N~~~n~-----l~~~~~~~~~~~~~~------~~~~  128 (250)
T d2h00a1          62 LRRGIDIGTGASCIYPLLGATL--NGWYFLATEVDDMCFNYAKKNVEQNN-----LSDLIKVVKVPQKTL------LMDA  128 (250)
T ss_dssp             CCEEEEESCTTTTHHHHHHHHH--HCCEEEEEESCHHHHHHHHHHHHHTT-----CTTTEEEEECCTTCS------STTT
T ss_pred             cceEEEeCCCchHHHHHHHHhC--CCccccceecCHHHHHHHHHHHHHhC-----CCcceeeeeeccHHh------hhhh
Confidence            345666775 466888888776  47899999999998887777776543     124566666544211      0111


Q ss_pred             HHH-HcCCccEEEeCCccC
Q 033624           96 AWE-AFGRVDALVNNAGIR  113 (115)
Q Consensus        96 ~~~-~~~~id~li~naG~~  113 (115)
                      +.. ..+.+|++|+|--+.
T Consensus       129 ~~~~~~~~fD~ivsNPPY~  147 (250)
T d2h00a1         129 LKEESEIIYDFCMCNPPFF  147 (250)
T ss_dssp             STTCCSCCBSEEEECCCCC
T ss_pred             hhhcccCceeEEEecCccc
Confidence            111 124689999986543

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=82.93  E-value=3.8  Score=25.57  Aligned_cols=47  Identities=9%  Similarity=0.110  Sum_probs=34.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHH-HhCCeEEEEecccchHHHHHHHhhCCC
Q 033624           16 NEKVVMVTGASSGLGREFCLDLA-KAGCRIVAAARRVDRLKSLCDEINKPG   65 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~-~~g~~v~~~~r~~~~~~~~~~~~~~~~   65 (115)
                      .|.++|=.|++.|   .++.+++ ..|++|+.++.+++..+.+.+.+++.+
T Consensus        62 ~G~~VLDiGCG~G---~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g  109 (285)
T d1kpga_          62 PGMTLLDVGCGWG---ATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSE  109 (285)
T ss_dssp             TTCEEEEETCTTS---HHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEecCcch---HHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhh
Confidence            4889999998765   3333333 469999999999988887777766544

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=82.84  E-value=3.7  Score=25.45  Aligned_cols=47  Identities=4%  Similarity=0.008  Sum_probs=36.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHh-CCeEEEEecccchHHHHHHHhhCCC
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKA-GCRIVAAARRVDRLKSLCDEINKPG   65 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~   65 (115)
                      .|.++|=.|++.|   .++..+++. |++|+.++.+++..+.+.+.++..+
T Consensus        52 ~g~~VLDiGCG~G---~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~   99 (280)
T d2fk8a1          52 PGMTLLDIGCGWG---TTMRRAVERFDVNVIGLTLSKNQHARCEQVLASID   99 (280)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEecCCch---HHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhc
Confidence            4889999999866   345556644 9999999999988887777776554

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=82.10  E-value=1.2  Score=28.27  Aligned_cols=24  Identities=8%  Similarity=-0.021  Sum_probs=18.2

Q ss_pred             HHHHHHHHHHcCCccEEEeCCccC
Q 033624           90 EISVQKAWEAFGRVDALVNNAGIR  113 (115)
Q Consensus        90 ~~~~~~~~~~~~~id~li~naG~~  113 (115)
                      .....++.++.+++|.+|..+|..
T Consensus       163 ~t~~~Ei~~q~~~~D~vv~~~G~G  186 (331)
T d1tdja1         163 GTLALELLQQDAHLDRVFVPVGGG  186 (331)
T ss_dssp             HHHHHHHHHHCTTCCEEEEECSSS
T ss_pred             hhHHHHHHHhcCCCCEEEEeCChh
Confidence            344567777788999999988764

>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}

class: Alpha and beta proteins (a/b)
fold: PEP carboxykinase-like
superfamily: PEP carboxykinase-like
family: HPr kinase HprK C-terminal domain
domain: HPr kinase HprK C-terminal domain
species: Mycoplasma pneumoniae [TaxId: 2104]

Probab=82.04  E-value=0.64  Score=27.34  Aligned_cols=32  Identities=31%  Similarity=0.491  Sum_probs=24.9

Q ss_pred             CCCCcEEEEecCCChHHHH-HHHHHHHhCCeEEE
Q 033624           14 DLNEKVVMVTGASSGLGRE-FCLDLAKAGCRIVA   46 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~~-~a~~l~~~g~~v~~   46 (115)
                      ...|+.++++|. +|.|++ ++.+|.++|+.++.
T Consensus        12 ~~~g~gvli~G~-sG~GKS~lal~l~~~G~~lva   44 (177)
T d1knxa2          12 EVFGVGVLLTGR-SGIGKSECALDLINKNHLFVG   44 (177)
T ss_dssp             EETTEEEEEEES-SSSSHHHHHHHHHTTTCEEEE
T ss_pred             EECCEEEEEEcC-CCCCHHHHHHHHHHcCCceec
Confidence            346888888877 677885 88899999987554

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=81.94  E-value=1.2  Score=26.03  Aligned_cols=31  Identities=32%  Similarity=0.227  Sum_probs=25.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHHhCC-eEEEEe
Q 033624           18 KVVMVTGASSGLGREFCLDLAKAGC-RIVAAA   48 (115)
Q Consensus        18 ~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~   48 (115)
                      -++-|.|++|..|..+.+.|.++.. .+..+.
T Consensus         6 ikVaIlGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           6 VRIAVLGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            4689999999999999999998754 554443

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.82  E-value=3.9  Score=25.59  Aligned_cols=42  Identities=17%  Similarity=0.189  Sum_probs=28.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHh--CCeEEEEecccchHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKA--GCRIVAAARRVDRLKSLCDE   60 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~   60 (115)
                      ..+.+||.|+++|   .+++++++.  ..+|.++.-+++-.+-+.+.
T Consensus        78 ~pk~vLiiGgG~G---~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~  121 (285)
T d2o07a1          78 NPRKVLIIGGGDG---GVLREVVKHPSVESVVQCEIDEDVIQVSKKF  121 (285)
T ss_dssp             SCCEEEEEECTTS---HHHHHHTTCTTCCEEEEEESCHHHHHHHHHH
T ss_pred             CcCeEEEeCCCch---HHHHHHHHcCCcceeeeccCCHHHHHHHHhh
Confidence            3578999998877   556677765  34788887776655544443

>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=81.72  E-value=0.41  Score=27.09  Aligned_cols=29  Identities=21%  Similarity=0.346  Sum_probs=25.0

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCCeE
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGCRI   44 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~~v   44 (115)
                      ..|++++|.|+ |.+|..+|..+++.|+.+
T Consensus        27 ~~gkrVvVIGg-G~~g~d~a~~~~r~G~~~   55 (162)
T d1ps9a2          27 PVGNKVAIIGC-GGIGFDTAMYLSQPGEST   55 (162)
T ss_dssp             CCCSEEEEECC-HHHHHHHHHHHTCCSSCG
T ss_pred             ccCCceEEEcC-chhHHHHHHHHHHcCCcc
Confidence            35899999997 889999999999999753

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.69  E-value=3.2  Score=24.70  Aligned_cols=45  Identities=11%  Similarity=-0.008  Sum_probs=33.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhC-CeEEEEecccchHHHHHHHhhC
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEINK   63 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~   63 (115)
                      .|..+|=.|++.|+   .+..+++.+ .+|++++.++..++.+.+..+.
T Consensus        53 ~g~~VLdIGcG~G~---~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~   98 (229)
T d1zx0a1          53 KGGRVLEVGFGMAI---AASKVQEAPIDEHWIIECNDGVFQRLRDWAPR   98 (229)
T ss_dssp             TCEEEEEECCTTSH---HHHHHHTSCEEEEEEEECCHHHHHHHHHHGGG
T ss_pred             CCCeEEEeeccchH---HHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhh
Confidence            57889999998773   455666654 5799999998877777666554

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=81.21  E-value=2  Score=25.33  Aligned_cols=42  Identities=21%  Similarity=0.312  Sum_probs=32.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDE   60 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   60 (115)
                      .+.++|=.|++.|   ..+..|++.|++|+.++.++..++.+.+.
T Consensus        42 ~~~~vLDiGcG~G---~~~~~l~~~~~~v~giD~s~~~l~~a~~~   83 (246)
T d2avna1          42 NPCRVLDLGGGTG---KWSLFLQERGFEVVLVDPSKEMLEVAREK   83 (246)
T ss_dssp             SCCEEEEETCTTC---HHHHHHHTTTCEEEEEESCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCc---hhcccccccceEEEEeecccccccccccc
Confidence            4667888998877   45667788899999999998777665554

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.13  E-value=0.7  Score=31.78  Aligned_cols=35  Identities=20%  Similarity=0.245  Sum_probs=28.5

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecc
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARR   50 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~   50 (115)
                      +...+++|.|+ +|+|..+++.|+..|. ++.+++.+
T Consensus        23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            34568899887 8999999999999997 57777653

>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GidA-like
domain: GidA-related protein TTHA1897
species: Thermus thermophilus [TaxId: 274]

Probab=80.87  E-value=1.9  Score=26.29  Aligned_cols=31  Identities=29%  Similarity=0.388  Sum_probs=26.2

Q ss_pred             EEEecCCChHHHHHHHHHHHhCCeEEEEeccc
Q 033624           20 VMVTGASSGLGREFCLDLAKAGCRIVAAARRV   51 (115)
Q Consensus        20 ~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~   51 (115)
                      ++|.|+ |.-|...|...++.|.+++++..+.
T Consensus         5 VIVIGg-G~AG~eAA~~aAR~G~ktllit~~~   35 (230)
T d2cula1           5 VLIVGA-GFSGAETAFWLAQKGVRVGLLTQSL   35 (230)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEEecc
Confidence            567777 7889999999999999999987653

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.80  E-value=4.8  Score=25.33  Aligned_cols=60  Identities=15%  Similarity=0.252  Sum_probs=36.9

Q ss_pred             CCCcEEEEecCCChHHHHHHHHHHHhCC-eEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecC
Q 033624           15 LNEKVVMVTGASSGLGREFCLDLAKAGC-RIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVC   83 (115)
Q Consensus        15 ~~~~~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~   83 (115)
                      ..++++|-.|++.|+   ++..+++.|+ +|++++.++ ....+.+..+..+     ...++.++..|+.
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~-----~~~~i~~i~~~~~   97 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNG-----FSDKITLLRGKLE   97 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTT-----CTTTEEEEESCTT
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhC-----ccccceEEEeehh
Confidence            368999999998773   3556677887 688888664 3333444443322     1235666666653

>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: PEP carboxykinase-like
superfamily: PEP carboxykinase-like
family: HPr kinase HprK C-terminal domain
domain: HPr kinase HprK C-terminal domain
species: Lactobacillus casei [TaxId: 1582]

Probab=80.75  E-value=1.1  Score=26.30  Aligned_cols=32  Identities=41%  Similarity=0.727  Sum_probs=24.4

Q ss_pred             CCCCcEEEEecCCChHHH-HHHHHHHHhCCeEEE
Q 033624           14 DLNEKVVMVTGASSGLGR-EFCLDLAKAGCRIVA   46 (115)
Q Consensus        14 ~~~~~~~lvtG~~~giG~-~~a~~l~~~g~~v~~   46 (115)
                      ...|+.++++|. +|.|+ .++.+|.++|+.++.
T Consensus        11 ~~~g~gvl~~G~-sG~GKStlal~l~~~g~~lv~   43 (176)
T d1kkma_          11 DIYGLGVLITGD-SGVGKSETALELVQRGHRLIA   43 (176)
T ss_dssp             EETTEEEEEECC-TTSCHHHHHHHHHHTTCEEEE
T ss_pred             EECCEEEEEEeC-CCCCHHHHHHHHHHcCCeEEe
Confidence            356888999987 66788 478889999987543

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=80.72  E-value=2.2  Score=24.81  Aligned_cols=30  Identities=20%  Similarity=0.112  Sum_probs=23.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHhCC-eEEEEe
Q 033624           19 VVMVTGASSGLGREFCLDLAKAGC-RIVAAA   48 (115)
Q Consensus        19 ~~lvtG~~~giG~~~a~~l~~~g~-~v~~~~   48 (115)
                      ++-|.|++|..|..+.+.|.++.. .+..+.
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~   33 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLS   33 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEee
Confidence            588999999999999999988653 454443

>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein FixJ, receiver domain
species: Rhizobium meliloti [TaxId: 382]

Probab=80.68  E-value=2.8  Score=22.49  Aligned_cols=80  Identities=8%  Similarity=0.020  Sum_probs=45.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecCCCHHHHHHHHHHH
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVCADGATIEISVQKA   96 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~~~~~~~~~~~~   96 (115)
                      ..+++|.=-...+...+...|...|++|..+. +   .+++.+.+++.         +.-.+-+|+.-+..+=-.++.++
T Consensus         3 ~~~ILiVDDd~~~~~~l~~~L~~~g~~v~~a~-~---~~~al~~~~~~---------~~dlvi~D~~mp~~~G~e~~~~l   69 (123)
T d1dbwa_           3 DYTVHIVDDEEPVRKSLAFMLTMNGFAVKMHQ-S---AEAFLAFAPDV---------RNGVLVTDLRMPDMSGVELLRNL   69 (123)
T ss_dssp             CCEEEEEESSHHHHHHHHHHHHHTTCEEEEES-C---HHHHHHHGGGC---------CSEEEEEECCSTTSCHHHHHHHH
T ss_pred             CCEEEEEECCHHHHHHHHHHHHHCCCEEEEEC-C---HHHHHHHHhhc---------CCcEEEEeccCccccchHHHHHH
Confidence            34677777667778888888888899876543 2   23344444432         22234455532222223456666


Q ss_pred             HHHcCCccEEEeC
Q 033624           97 WEAFGRVDALVNN  109 (115)
Q Consensus        97 ~~~~~~id~li~n  109 (115)
                      ++..+.+-+++..
T Consensus        70 r~~~~~~~iI~lt   82 (123)
T d1dbwa_          70 GDLKINIPSIVIT   82 (123)
T ss_dssp             HHTTCCCCEEEEE
T ss_pred             HhcCCCCeEEEEE
Confidence            6666666666554

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=80.62  E-value=3.3  Score=23.28  Aligned_cols=44  Identities=16%  Similarity=0.203  Sum_probs=30.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccchHHHHHHHh
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVDRLKSLCDEI   61 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~   61 (115)
                      .|+++.|.+.++|.|.-++..+.+.|.++.  .-+++..+++.+.+
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~--~l~~~t~~~L~~~l   45 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLA--TLEEKTIEELRSFL   45 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEEC--CCCHHHHHHHHHHS
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccC--CCCHHHHHHHHHhC
Confidence            478888888889999999999999886553  33333333444433

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=80.40  E-value=1.2  Score=28.26  Aligned_cols=41  Identities=15%  Similarity=0.157  Sum_probs=28.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHhC--CeEEEEecccchHHHHHH
Q 033624           16 NEKVVMVTGASSGLGREFCLDLAKAG--CRIVAAARRVDRLKSLCD   59 (115)
Q Consensus        16 ~~~~~lvtG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~   59 (115)
                      .-+.++|.|+++|   .+++++++..  .+|.++..+++-.+-+.+
T Consensus        89 ~pk~VLiiGgG~G---~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~  131 (295)
T d1inla_          89 NPKKVLIIGGGDG---GTLREVLKHDSVEKAILCEVDGLVIEAARK  131 (295)
T ss_dssp             SCCEEEEEECTTC---HHHHHHTTSTTCSEEEEEESCHHHHHHHHH
T ss_pred             CCceEEEecCCch---HHHHHHHhcCCCceEEEecCCHHHHHHHHH
Confidence            3578999999877   5566777653  468888888765554433

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=80.26  E-value=4.3  Score=24.43  Aligned_cols=48  Identities=17%  Similarity=0.120  Sum_probs=33.4

Q ss_pred             CCcEEEEecCCChH-HHHHHHHHHHhCCeEEEEecccchHHHHHHHhhCC
Q 033624           16 NEKVVMVTGASSGL-GREFCLDLAKAGCRIVAAARRVDRLKSLCDEINKP   64 (115)
Q Consensus        16 ~~~~~lvtG~~~gi-G~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~   64 (115)
                      .|.++|=.|++.|- -..+++.. ..+.+|+.++.++..++.+.+..+..
T Consensus        73 pG~~VLDlGaGsG~~t~~la~~V-G~~G~V~aVD~s~~~l~~a~~~a~~~  121 (227)
T d1g8aa_          73 PGKSVLYLGIASGTTASHVSDIV-GWEGKIFGIEFSPRVLRELVPIVEER  121 (227)
T ss_dssp             TTCEEEEETTTSTTHHHHHHHHH-CTTSEEEEEESCHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeccCCCHHHHHHHHHh-CCCCEEEEEeCcHHHHHHHHHHHHhc
Confidence            48899999987663 33333322 23458999999998888877766544

>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoP receiver domain
species: Bacillus subtilis [TaxId: 1423]

Probab=80.22  E-value=2.8  Score=22.30  Aligned_cols=36  Identities=14%  Similarity=0.316  Sum_probs=25.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHhCCeEEEEecccc
Q 033624           17 EKVVMVTGASSGLGREFCLDLAKAGCRIVAAARRVD   52 (115)
Q Consensus        17 ~~~~lvtG~~~giG~~~a~~l~~~g~~v~~~~r~~~   52 (115)
                      .+++||.=-..-+-..+...|.+.|++|..+....+
T Consensus         2 ~krILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~   37 (121)
T d1mvoa_           2 NKKILVVDDEESIVTLLQYNLERSGYDVITASDGEE   37 (121)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHH
T ss_pred             CCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHH
Confidence            356777776666777777888888998886544333

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=80.14  E-value=2.4  Score=23.40  Aligned_cols=35  Identities=26%  Similarity=0.292  Sum_probs=28.7

Q ss_pred             CCcEEEEecCC---ChHHHHHHHHHHHhCCeEEEEecc
Q 033624           16 NEKVVMVTGAS---SGLGREFCLDLAKAGCRIVAAARR   50 (115)
Q Consensus        16 ~~~~~lvtG~~---~giG~~~a~~l~~~g~~v~~~~r~   50 (115)
                      ..|.+.|.|++   +..|..+.+.|.+.|+.+..+--+
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~   49 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPR   49 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGG
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEec
Confidence            35789999997   468999999999999998876543

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=80.02  E-value=2.2  Score=26.34  Aligned_cols=59  Identities=20%  Similarity=0.211  Sum_probs=40.2

Q ss_pred             CCcEEEEecCCCh-HHHHHHHHHHHhC-CeEEEEecccchHHHHHHHhhCCCCCCCCCccceEEEEeecC
Q 033624           16 NEKVVMVTGASSG-LGREFCLDLAKAG-CRIVAAARRVDRLKSLCDEINKPGMVGSPDSVRAVAVELDVC   83 (115)
Q Consensus        16 ~~~~~lvtG~~~g-iG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~   83 (115)
                      .|.+++-.|++.| ++..+|    +.| ++|+.++.++...+.+.+.++..+     -..++..+..|..
T Consensus       107 ~g~~VlD~~aG~G~~~l~~a----~~~~~~V~avd~n~~a~~~~~~N~~~n~-----l~~~v~~~~~D~~  167 (260)
T d2frna1         107 PDELVVDMFAGIGHLSLPIA----VYGKAKVIAIEKDPYTFKFLVENIHLNK-----VEDRMSAYNMDNR  167 (260)
T ss_dssp             TTCEEEETTCTTTTTHHHHH----HHTCCEEEEECCCHHHHHHHHHHHHHTT-----CTTTEEEECSCTT
T ss_pred             CccEEEECcceEcHHHHHHH----HhCCcEEEEecCCHHHHHHHHHHHHHhC-----CCceEEEEEcchH
Confidence            4788888887644 554444    345 589999999988887777666433     1245777777764