BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033626
(115 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|351727381|ref|NP_001236135.1| uncharacterized protein LOC100306257 [Glycine max]
gi|255628025|gb|ACU14357.1| unknown [Glycine max]
Length = 115
Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/110 (82%), Positives = 103/110 (93%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQ 60
MDSQ QTTSLQRLQNVEKR+V+VLELAGGVMDELA+P+GPRK+++ NHC EFMQLIKDIQ
Sbjct: 1 MDSQGQTTSLQRLQNVEKRIVKVLELAGGVMDELASPVGPRKDVVQNHCLEFMQLIKDIQ 60
Query: 61 VTLRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTIDE 110
V LRDEIKSACEYRPFEKCDY +RI NEIC KK+E+++SQLDAMKQTIDE
Sbjct: 61 VALRDEIKSACEYRPFEKCDYGSRIANEICHKKVEFIMSQLDAMKQTIDE 110
>gi|356505076|ref|XP_003521318.1| PREDICTED: uncharacterized protein LOC100792126 [Glycine max]
Length = 115
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 89/110 (80%), Positives = 103/110 (93%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQ 60
MDSQ QTTSLQRLQNVEKR+V+VLELAGGVMDELA+P+GPRK+++ NHC EFMQLIKDIQ
Sbjct: 1 MDSQGQTTSLQRLQNVEKRIVKVLELAGGVMDELASPVGPRKDVVQNHCLEFMQLIKDIQ 60
Query: 61 VTLRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTIDE 110
V LRDEIKSACEYRPFEKCDY +RI NEIC KK+E+++SQLDA+KQT+DE
Sbjct: 61 VALRDEIKSACEYRPFEKCDYGSRIANEICHKKVEFIMSQLDAIKQTVDE 110
>gi|449453808|ref|XP_004144648.1| PREDICTED: mediator of RNA polymerase II transcription subunit
11-like [Cucumis sativus]
gi|449504225|ref|XP_004162288.1| PREDICTED: mediator of RNA polymerase II transcription subunit
11-like [Cucumis sativus]
Length = 118
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/110 (81%), Positives = 100/110 (90%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQ 60
MD + TSLQRLQNVEKR+VRVLELAGGVM+ELANP GPRKE +NNHC EFMQ IKDIQ
Sbjct: 1 MDPPAHNTSLQRLQNVEKRIVRVLELAGGVMEELANPAGPRKEFVNNHCSEFMQFIKDIQ 60
Query: 61 VTLRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTIDE 110
VTLRDEIKSACEYRPFEKCDYS+RI NE+CCKKLEY++S+LD MKQTID+
Sbjct: 61 VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKLEYMVSKLDGMKQTIDD 110
>gi|388490816|gb|AFK33474.1| unknown [Lotus japonicus]
Length = 115
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/110 (81%), Positives = 102/110 (92%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQ 60
MD Q QTTSLQRLQNVEKR+V+VLELAGGVMDELA+P+GPRK+++ NHC EFMQLIKDIQ
Sbjct: 1 MDPQGQTTSLQRLQNVEKRIVKVLELAGGVMDELASPLGPRKDVVQNHCLEFMQLIKDIQ 60
Query: 61 VTLRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTIDE 110
V LRDEIKSACEYRPFEKCDY +RI NEIC +K+E+V+SQLDAMKQTIDE
Sbjct: 61 VALRDEIKSACEYRPFEKCDYGSRIANEICYQKVEFVMSQLDAMKQTIDE 110
>gi|225455764|ref|XP_002269953.1| PREDICTED: uncharacterized protein LOC100255926 [Vitis vinifera]
gi|297734129|emb|CBI15376.3| unnamed protein product [Vitis vinifera]
Length = 115
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/114 (79%), Positives = 103/114 (90%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQ 60
MDSQ+ TSLQRLQNVEKR+++VLELAGGVMDEL NP GPRKE+++ HC EFMQLIKDIQ
Sbjct: 1 MDSQTPNTSLQRLQNVEKRIIKVLELAGGVMDELCNPSGPRKELLSIHCGEFMQLIKDIQ 60
Query: 61 VTLRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTIDECNDT 114
+TLRDEIKSACEYRPFEKCDY +RI NEICCKKLEYV+SQLD MK+TIDE +D
Sbjct: 61 MTLRDEIKSACEYRPFEKCDYISRISNEICCKKLEYVISQLDGMKETIDEYHDA 114
>gi|255554731|ref|XP_002518403.1| conserved hypothetical protein [Ricinus communis]
gi|223542248|gb|EEF43790.1| conserved hypothetical protein [Ricinus communis]
Length = 117
Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/113 (79%), Positives = 99/113 (87%), Gaps = 1/113 (0%)
Query: 3 SQSQTTSLQRLQNVEK-RVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQV 61
SQ+Q TSLQRLQNVEK +VRVLELA GVMDELA P GPRKE INN+CREFMQ+IKDIQ
Sbjct: 4 SQTQNTSLQRLQNVEKVTIVRVLELASGVMDELAAPTGPRKEFINNNCREFMQMIKDIQF 63
Query: 62 TLRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTIDECNDT 114
TLR+EIKSACEYRPFEKCDYS RI NEICCKKLEYV+SQLDA+K +ID+ D
Sbjct: 64 TLRNEIKSACEYRPFEKCDYSCRISNEICCKKLEYVISQLDAIKLSIDQYEDA 116
>gi|224118176|ref|XP_002331576.1| predicted protein [Populus trichocarpa]
gi|222873800|gb|EEF10931.1| predicted protein [Populus trichocarpa]
Length = 129
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/108 (78%), Positives = 95/108 (87%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQ 60
MDSQ+Q TSLQRLQNVEK VVRVLE+AG VMDEL+NP GPRKE INNHCR+FMQ+IKDIQ
Sbjct: 1 MDSQTQNTSLQRLQNVEKTVVRVLEVAGAVMDELSNPTGPRKEFINNHCRDFMQMIKDIQ 60
Query: 61 VTLRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTI 108
TLR+EIKSACEYRPFEK DY+ RI NEIC KLE++LSQLD + QTI
Sbjct: 61 FTLRNEIKSACEYRPFEKSDYTCRISNEICLSKLEHILSQLDLITQTI 108
>gi|42572221|ref|NP_974205.1| uncharacterized protein [Arabidopsis thaliana]
gi|75123851|sp|Q6ID77.1|MED11_ARATH RecName: Full=Mediator of RNA polymerase II transcription subunit
11
gi|48310228|gb|AAT41779.1| At3g01435 [Arabidopsis thaliana]
gi|52218796|gb|AAU29468.1| At3g01435 [Arabidopsis thaliana]
gi|110738543|dbj|BAF01197.1| hypothetical protein [Arabidopsis thaliana]
gi|332640145|gb|AEE73666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 115
Score = 181 bits (460), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/109 (77%), Positives = 98/109 (89%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQ 60
MD Q+Q TSLQRLQNVE RVV+VLELAGGVM+ELA+P GP+KE +N+HCREFMQ +KDIQ
Sbjct: 1 MDPQTQNTSLQRLQNVENRVVKVLELAGGVMEELASPSGPKKEFVNSHCREFMQSMKDIQ 60
Query: 61 VTLRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTID 109
VTLR+EIKSACEYRPFEKCDY+ RI NEIC +KLEYVL+QL+ +KQT D
Sbjct: 61 VTLREEIKSACEYRPFEKCDYNARIANEICFQKLEYVLTQLEDLKQTAD 109
>gi|297828600|ref|XP_002882182.1| hypothetical protein ARALYDRAFT_317046 [Arabidopsis lyrata subsp.
lyrata]
gi|297328022|gb|EFH58441.1| hypothetical protein ARALYDRAFT_317046 [Arabidopsis lyrata subsp.
lyrata]
Length = 115
Score = 181 bits (460), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 84/107 (78%), Positives = 97/107 (90%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQ 60
MD Q+Q TSLQRLQNVE RVV+VLELAGGVM+ELA+P GP+KE +N+HCREFMQ +KDIQ
Sbjct: 1 MDPQTQNTSLQRLQNVENRVVKVLELAGGVMEELASPSGPKKEFVNSHCREFMQSMKDIQ 60
Query: 61 VTLRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQT 107
VTLR+EIKSACEYRPFEKCDY+ RI NEIC +KLEYVL+QLD +KQT
Sbjct: 61 VTLREEIKSACEYRPFEKCDYNARIANEICFQKLEYVLTQLDDLKQT 107
>gi|224034395|gb|ACN36273.1| unknown [Zea mays]
gi|413935989|gb|AFW70540.1| hypothetical protein ZEAMMB73_750956 [Zea mays]
gi|413935990|gb|AFW70541.1| hypothetical protein ZEAMMB73_750956 [Zea mays]
Length = 115
Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 77/113 (68%), Positives = 94/113 (83%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQ 60
M QSQ++SLQRLQ+VEKR+VRVLELAG VM+EL N GPR + ++ HCREFM +K+IQ
Sbjct: 1 MIPQSQSSSLQRLQHVEKRIVRVLELAGAVMEELGNSHGPRTDAVSAHCREFMIAMKEIQ 60
Query: 61 VTLRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTIDECND 113
TLR+EIKSACEYRPFEKCDYS RI NEICCKKLEYV+ +LD M+Q+++ D
Sbjct: 61 TTLREEIKSACEYRPFEKCDYSARIANEICCKKLEYVIEKLDTMQQSLEHITD 113
>gi|242064302|ref|XP_002453440.1| hypothetical protein SORBIDRAFT_04g006040 [Sorghum bicolor]
gi|241933271|gb|EES06416.1| hypothetical protein SORBIDRAFT_04g006040 [Sorghum bicolor]
Length = 115
Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 77/113 (68%), Positives = 93/113 (82%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQ 60
M QSQ++SLQRLQ+VEKR+VRVLELAG VM+EL N GPR + + HCREFM +K+IQ
Sbjct: 1 MIPQSQSSSLQRLQHVEKRIVRVLELAGAVMEELGNSQGPRTDAVGAHCREFMIAMKEIQ 60
Query: 61 VTLRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTIDECND 113
TLR+EIKSACEYRPFEKCDYS RI NEICCKKLEYV+ +LD M+Q +++ D
Sbjct: 61 TTLREEIKSACEYRPFEKCDYSARIANEICCKKLEYVIEKLDTMQQNLEQSTD 113
>gi|226493560|ref|NP_001144272.1| uncharacterized protein LOC100277150 [Zea mays]
gi|195639422|gb|ACG39179.1| hypothetical protein [Zea mays]
Length = 115
Score = 168 bits (425), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 77/113 (68%), Positives = 94/113 (83%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQ 60
M QSQ++SLQRLQ+VEKR+VRVLELAG VM+EL N GPR + ++ HCREFM +K+IQ
Sbjct: 1 MIPQSQSSSLQRLQHVEKRIVRVLELAGAVMEELGNSHGPRTDAVSAHCREFMIAMKEIQ 60
Query: 61 VTLRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTIDECND 113
TLR+EIKSACEYRPFEKCDYS RI NEICCKKLEYV+ +LD M+Q+++ D
Sbjct: 61 TTLREEIKSACEYRPFEKCDYSARIANEICCKKLEYVIEKLDTMQQSLEYITD 113
>gi|226502508|ref|NP_001146057.1| uncharacterized protein LOC100279588 [Zea mays]
gi|194706986|gb|ACF87577.1| unknown [Zea mays]
gi|195639204|gb|ACG39070.1| hypothetical protein [Zea mays]
gi|219885503|gb|ACL53126.1| unknown [Zea mays]
gi|413926314|gb|AFW66246.1| hypothetical protein ZEAMMB73_349263 [Zea mays]
gi|413926315|gb|AFW66247.1| hypothetical protein ZEAMMB73_349263 [Zea mays]
Length = 115
Score = 167 bits (423), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 77/113 (68%), Positives = 92/113 (81%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQ 60
M QSQ++SLQRLQ+VEKR+VRVLELAG VM+EL GPR + + HCREFM +K+IQ
Sbjct: 1 MIPQSQSSSLQRLQHVEKRIVRVLELAGAVMEELGYSQGPRTDAVGAHCREFMMAMKEIQ 60
Query: 61 VTLRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTIDECND 113
TLR+EIKSACEYRPFEKCDYS RI NEICCKKLEYVL +LD M+Q +++ D
Sbjct: 61 TTLREEIKSACEYRPFEKCDYSARIANEICCKKLEYVLEKLDTMQQNLEQSTD 113
>gi|115444719|ref|NP_001046139.1| Os02g0189100 [Oryza sativa Japonica Group]
gi|46389908|dbj|BAD15529.1| unknown protein [Oryza sativa Japonica Group]
gi|46390954|dbj|BAD16467.1| unknown protein [Oryza sativa Japonica Group]
gi|113535670|dbj|BAF08053.1| Os02g0189100 [Oryza sativa Japonica Group]
Length = 115
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 92/114 (80%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQ 60
M QSQ++SLQRL +VE+ +VR + LAG VM+EL N GPR E + HCREFM +K+IQ
Sbjct: 1 MLPQSQSSSLQRLNHVEQMIVRAVNLAGTVMEELGNATGPRTEGVAGHCREFMLAMKEIQ 60
Query: 61 VTLRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTIDECNDT 114
TLR+EIKSACEYRPFEKCDYS RI NEICCKK+EYVL +LDAM++ I+EC+ T
Sbjct: 61 TTLREEIKSACEYRPFEKCDYSARIANEICCKKVEYVLEKLDAMQKNIEECSTT 114
>gi|242064304|ref|XP_002453441.1| hypothetical protein SORBIDRAFT_04g006060 [Sorghum bicolor]
gi|241933272|gb|EES06417.1| hypothetical protein SORBIDRAFT_04g006060 [Sorghum bicolor]
Length = 115
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/113 (67%), Positives = 92/113 (81%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQ 60
M QSQ++SLQRLQ VEKR+VRVLELAG VM+EL N GPR + + HCREFM +K+IQ
Sbjct: 1 MIPQSQSSSLQRLQLVEKRIVRVLELAGAVMEELGNSQGPRNDAVAAHCREFMIAMKEIQ 60
Query: 61 VTLRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTIDECND 113
TLR+EIKSACEYRPFEKCDY+ RI NEICCKKLEYV+ +LD M+Q +++ D
Sbjct: 61 TTLREEIKSACEYRPFEKCDYNARIANEICCKKLEYVIEKLDTMQQNLEQSMD 113
>gi|326532924|dbj|BAJ89307.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 115
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 71/113 (62%), Positives = 94/113 (83%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQ 60
M+ Q Q++SL+RL NVE+R+VRV+EL+G VM+EL N GPR E + +HCR+FM +K+IQ
Sbjct: 1 MNPQGQSSSLERLHNVEQRIVRVVELSGAVMEELGNSQGPRGEAVASHCRDFMLFMKEIQ 60
Query: 61 VTLRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTIDECND 113
TLR+EIKSACEYRPFEKCDYS RI NEICCKKLEYV+ ++DAM+ +++ +D
Sbjct: 61 TTLREEIKSACEYRPFEKCDYSARIANEICCKKLEYVIEKMDAMQLNMEQSSD 113
>gi|357138877|ref|XP_003571013.1| PREDICTED: uncharacterized protein LOC100831854 [Brachypodium
distachyon]
Length = 115
Score = 160 bits (406), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 74/113 (65%), Positives = 90/113 (79%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQ 60
M Q Q++SLQRL +VEKR+VRVLELAG VM+EL N GPR + + CREFM +K+IQ
Sbjct: 1 MVPQGQSSSLQRLHHVEKRIVRVLELAGAVMEELGNSQGPRADAVAAQCREFMLSMKEIQ 60
Query: 61 VTLRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTIDECND 113
TLR+EIKSACEYRPFEKCDYS RI NEICCKKLEYV+ ++DAM+ I++ D
Sbjct: 61 TTLREEIKSACEYRPFEKCDYSARIANEICCKKLEYVIEKMDAMQLNIEQSTD 113
>gi|46390841|dbj|BAD16345.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 113
Score = 154 bits (389), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 71/113 (62%), Positives = 90/113 (79%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQ 60
M QSQ++SLQRL +VE+R+V++++LAG VM+EL N GPR E + HCRE+M IK+IQ
Sbjct: 1 MLPQSQSSSLQRLNHVEQRIVQLMQLAGAVMEELGNSQGPRPEKVVAHCREYMLTIKEIQ 60
Query: 61 VTLRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTIDECND 113
TLR+EIKSACEYRPFEK DYS RI NEI CKK+EYVL +LDAM+ I++C
Sbjct: 61 TTLREEIKSACEYRPFEKSDYSARIANEISCKKVEYVLEKLDAMQTNIEKCTS 113
>gi|125540989|gb|EAY87384.1| hypothetical protein OsI_08789 [Oryza sativa Indica Group]
Length = 115
Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 69/108 (63%), Positives = 86/108 (79%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQ 60
M QSQ++SLQ L +VE+R+V++++LAG VM+EL N GPR E + HCRE+M IK+IQ
Sbjct: 1 MLPQSQSSSLQHLNHVEQRIVQLMQLAGAVMEELGNYQGPRPEKVVAHCREYMLAIKEIQ 60
Query: 61 VTLRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTI 108
TLR+EIKSACEYRPFEK DYS RI NEI CKK+EYVL +LDAM+ I
Sbjct: 61 TTLREEIKSACEYRPFEKSDYSARIANEISCKKVEYVLEKLDAMQTNI 108
>gi|326530792|dbj|BAK01194.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 115
Score = 147 bits (370), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 69/109 (63%), Positives = 85/109 (77%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQ 60
M S Q +SL+RL +VEKR+V+ LELAG VM+EL N GPR E + CREFM ++ IQ
Sbjct: 1 MSSPVQRSSLERLHHVEKRIVQALELAGSVMEELGNSQGPRAEAVVGCCREFMLCMRQIQ 60
Query: 61 VTLRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTID 109
T+R+EIKSACEYRPFEKCDYS RI NEICCKKLEYV+ ++DAM+ I+
Sbjct: 61 NTMREEIKSACEYRPFEKCDYSARIANEICCKKLEYVIEKMDAMQLNIE 109
>gi|168044579|ref|XP_001774758.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673913|gb|EDQ60429.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 122
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 80/102 (78%)
Query: 7 TTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQVTLRDE 66
+TSLQRL +VEK++V +ELAG VM+ELA GPR+E++N C+EFMQ +K+IQ TLRDE
Sbjct: 12 STSLQRLHHVEKKIVHTVELAGRVMEELAKTGGPRQEVVNVQCQEFMQAVKEIQTTLRDE 71
Query: 67 IKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTI 108
IKS CEYRP+E DY RI +EI KKLE V+ Q++AM++ +
Sbjct: 72 IKSMCEYRPYENSDYPARINSEISVKKLECVIGQIEAMREAV 113
>gi|302796280|ref|XP_002979902.1| hypothetical protein SELMODRAFT_111765 [Selaginella moellendorffii]
gi|300152129|gb|EFJ18772.1| hypothetical protein SELMODRAFT_111765 [Selaginella moellendorffii]
Length = 119
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 75/107 (70%)
Query: 3 SQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQVT 62
+Q Q+ +L RL +VE+++V+ +E AG VM+ELAN GPR E + C EFM+ +KDIQ
Sbjct: 5 TQPQSPALLRLAHVERKIVQAVEFAGTVMEELANAGGPRMEFVTTQCHEFMKSMKDIQTV 64
Query: 63 LRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTID 109
L +EIKS CEYRP+E CDY R+ EI KK++ VL +L ++ TI+
Sbjct: 65 LHEEIKSMCEYRPYENCDYIPRMGGEISLKKIDCVLDELQKLEDTIN 111
>gi|302811384|ref|XP_002987381.1| hypothetical protein SELMODRAFT_126111 [Selaginella moellendorffii]
gi|300144787|gb|EFJ11468.1| hypothetical protein SELMODRAFT_126111 [Selaginella moellendorffii]
Length = 119
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 74/107 (69%)
Query: 3 SQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQVT 62
+Q Q+ +L RL +VE+++V+ +E AG VM+ELAN GPR E C EFM+ +KDIQ
Sbjct: 5 TQPQSPALLRLAHVERKIVQAVEFAGSVMEELANAGGPRMEFATTQCHEFMKSMKDIQTV 64
Query: 63 LRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTID 109
L +EIKS CEYRP+E CDY R+ EI KK++ VL +L ++ TI+
Sbjct: 65 LHEEIKSMCEYRPYENCDYIPRMGGEISLKKIDCVLDELQKLEDTIN 111
>gi|357521493|ref|XP_003631035.1| Retinoblastoma-binding protein [Medicago truncatula]
gi|355525057|gb|AET05511.1| Retinoblastoma-binding protein [Medicago truncatula]
Length = 311
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/59 (81%), Positives = 55/59 (93%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDI 59
MDSQ QTTSLQRLQNVEKR+V+VLELAGGVMDELA+P+GPRK+++ NHC EFMQLIK I
Sbjct: 119 MDSQGQTTSLQRLQNVEKRIVKVLELAGGVMDELASPVGPRKDLVQNHCLEFMQLIKVI 177
>gi|357521503|ref|XP_003631040.1| hypothetical protein MTR_8g106500 [Medicago truncatula]
gi|355525062|gb|AET05516.1| hypothetical protein MTR_8g106500 [Medicago truncatula]
Length = 91
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/59 (81%), Positives = 55/59 (93%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDI 59
MDSQ QTTSLQRLQNVEKR+V+VLELAGGVMDELA+P+GPRK+++ NHC EFMQLIK I
Sbjct: 1 MDSQGQTTSLQRLQNVEKRIVKVLELAGGVMDELASPVGPRKDLVQNHCLEFMQLIKVI 59
>gi|357438163|ref|XP_003589357.1| hypothetical protein MTR_1g023320 [Medicago truncatula]
gi|355478405|gb|AES59608.1| hypothetical protein MTR_1g023320 [Medicago truncatula]
Length = 91
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 55/59 (93%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDI 59
MDSQ QTTSLQRL+NVEKR+V+VLELAGGVMDELA+P+GPRK+++ NHC EFMQLIK I
Sbjct: 1 MDSQGQTTSLQRLENVEKRIVKVLELAGGVMDELASPVGPRKDLVQNHCLEFMQLIKVI 59
>gi|356529388|ref|XP_003533276.1| PREDICTED: uncharacterized protein LOC100784661 [Glycine max]
Length = 63
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 54/59 (91%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDI 59
MDSQ QTTSLQRLQNVEKR+V+VLEL GGVMDELA+P+GPRK+++ NHC EFMQLIK I
Sbjct: 1 MDSQGQTTSLQRLQNVEKRIVKVLELVGGVMDELASPVGPRKDVVQNHCLEFMQLIKVI 59
>gi|168033486|ref|XP_001769246.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679511|gb|EDQ65958.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 89
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 59/78 (75%)
Query: 7 TTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQVTLRDE 66
+TSL+RL +VEKR+V +EL+G VM+ELA GPR E++ C+EFMQ +K+IQ TLRDE
Sbjct: 12 STSLRRLHHVEKRIVHTVELSGRVMEELAKAGGPRAEVVAVQCQEFMQAVKEIQTTLRDE 71
Query: 67 IKSACEYRPFEKCDYSTR 84
IKS CEYRP E DY R
Sbjct: 72 IKSMCEYRPNENSDYPAR 89
>gi|357521475|ref|XP_003631026.1| Cytochrome c oxidase subunit [Medicago truncatula]
gi|355525048|gb|AET05502.1| Cytochrome c oxidase subunit [Medicago truncatula]
Length = 153
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 51/64 (79%)
Query: 52 FMQLIKDIQVTLRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTIDEC 111
F + DIQVTLRDEIKSACEYRPFEKCDY RI NEI KK+EYV+SQL+AMKQTI+E
Sbjct: 90 FAVGLDDIQVTLRDEIKSACEYRPFEKCDYGPRIANEIGFKKVEYVMSQLEAMKQTINEY 149
Query: 112 NDTC 115
N
Sbjct: 150 NAAA 153
>gi|356573548|ref|XP_003554920.1| PREDICTED: uncharacterized protein LOC100807888 [Glycine max]
Length = 61
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/57 (77%), Positives = 51/57 (89%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIK 57
MDSQ QTTSL RLQNVEKR+V+VLE A GVMDELA+P+GPRK+++ NHC EFMQLIK
Sbjct: 1 MDSQGQTTSLHRLQNVEKRIVKVLEFAVGVMDELASPIGPRKDVVQNHCLEFMQLIK 57
>gi|357438165|ref|XP_003589358.1| hypothetical protein MTR_1g023330 [Medicago truncatula]
gi|355478406|gb|AES59609.1| hypothetical protein MTR_1g023330 [Medicago truncatula]
Length = 59
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/55 (83%), Positives = 49/55 (89%)
Query: 58 DIQVTLRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTIDECN 112
DIQV LRDEIKSACEYRPFEKCDY RI NEIC KK+EYV+SQL+AMKQTIDE N
Sbjct: 2 DIQVALRDEIKSACEYRPFEKCDYGPRIANEICFKKVEYVMSQLEAMKQTIDEHN 56
>gi|357521497|ref|XP_003631037.1| hypothetical protein MTR_8g106470 [Medicago truncatula]
gi|355525059|gb|AET05513.1| hypothetical protein MTR_8g106470 [Medicago truncatula]
Length = 71
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/57 (78%), Positives = 50/57 (87%)
Query: 56 IKDIQVTLRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTIDECN 112
+ DIQVTLRDEIKSACEYRPFEKCDY RI NEI KK+EYV+SQL+AMKQTI+E N
Sbjct: 12 LPDIQVTLRDEIKSACEYRPFEKCDYGPRIANEIGFKKVEYVMSQLEAMKQTINEYN 68
>gi|195644034|gb|ACG41485.1| hypothetical protein [Zea mays]
Length = 99
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 3/72 (4%)
Query: 31 MDELANPMGPRKEIINNHCREFMQLIKDIQVTLRDEIKSACEYRPFEKCDYSTRILNEIC 90
M+EL GPR + + HCREFM +K+IQ TLR+EIKSACEYRPFEKCDYS R+ N
Sbjct: 1 MEELGYSQGPRTDAVGAHCREFMMAMKEIQTTLREEIKSACEYRPFEKCDYSARLNN--- 57
Query: 91 CKKLEYVLSQLD 102
KL Y+ + +D
Sbjct: 58 LSKLVYIRTYVD 69
>gi|195643008|gb|ACG40972.1| hypothetical protein [Zea mays]
gi|413941939|gb|AFW74588.1| hypothetical protein ZEAMMB73_231868 [Zea mays]
gi|413941940|gb|AFW74589.1| hypothetical protein ZEAMMB73_231868 [Zea mays]
Length = 63
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 51/61 (83%)
Query: 53 MQLIKDIQVTLRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTIDECN 112
M ++K+IQ+ L +EIKSACEYRPFEKCDYS RI NEICCKKLEYV+ +LD M+Q +++
Sbjct: 1 MIVMKEIQMILCEEIKSACEYRPFEKCDYSARIANEICCKKLEYVIEKLDTMQQNLEQST 60
Query: 113 D 113
D
Sbjct: 61 D 61
>gi|413935988|gb|AFW70539.1| hypothetical protein ZEAMMB73_750956 [Zea mays]
Length = 83
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQ 60
M QSQ++SLQRLQ+VEKR+VRVLELAG VM+EL N GPR + ++ HCREFM +K +
Sbjct: 1 MIPQSQSSSLQRLQHVEKRIVRVLELAGAVMEELGNSHGPRTDAVSAHCREFMIAMK-VT 59
Query: 61 VTLRDEIKSACEY 73
L I S C +
Sbjct: 60 SPLPALISSGCGF 72
>gi|115448447|ref|NP_001048003.1| Os02g0728900 [Oryza sativa Japonica Group]
gi|113537534|dbj|BAF09917.1| Os02g0728900 [Oryza sativa Japonica Group]
Length = 171
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKD 58
M QSQ++SLQRL +VE+R+V++++LAG VM+EL N GPR E + HCRE+M IK
Sbjct: 114 MLPQSQSSSLQRLNHVEQRIVQLMQLAGAVMEELGNSQGPRPEKVVAHCREYMLTIKG 171
>gi|218190218|gb|EEC72645.1| hypothetical protein OsI_06166 [Oryza sativa Indica Group]
gi|222622338|gb|EEE56470.1| hypothetical protein OsJ_05686 [Oryza sativa Japonica Group]
Length = 80
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 41/57 (71%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIK 57
M QSQ++SLQRL +VE+ +VR + LAG VM+EL N GPR E + HCREFM +K
Sbjct: 1 MLPQSQSSSLQRLNHVEQMIVRAVNLAGTVMEELGNATGPRTEGVAGHCREFMLAMK 57
>gi|326501162|dbj|BAJ98812.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 75
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 37/53 (69%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFM 53
M S Q + L+RL +VEKR+V+ LELAG VM EL N GPR ++ + CREFM
Sbjct: 1 MSSLFQRSLLERLHHVEKRIVQALELAGSVMGELGNSQGPRAGVVIDCCREFM 53
>gi|301120880|ref|XP_002908167.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262103198|gb|EEY61250.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 137
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKE----IINNHCREFMQLI 56
S LQ L VEK++V L A M L P +E N+ C EF+QL+
Sbjct: 18 WSSSRHVAVLQALDAVEKKLVTALHTAATAMS-LVAPRVSSEESSSLAFNSACTEFLQLV 76
Query: 57 KDIQVTLRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTIDE 110
K+I + L + I +YR F + Y EIC +K++ V QL + + +++
Sbjct: 77 KEIHIELANHIHLVSDYRTFARSTYGAEKDVEICREKVKVVSEQLHTLSRFLED 130
>gi|348680861|gb|EGZ20677.1| hypothetical protein PHYSODRAFT_259487 [Phytophthora sojae]
Length = 165
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 10 LQRLQNVEKRVVRVLELAGGVMDELANPMGPRKE---IINNHCREFMQLIKDIQVTLRDE 66
LQ L VEK++V + A M +A + + N C EF+QL+K+I L +
Sbjct: 53 LQALNVVEKKLVTAVRTAATAMSLMAPRVSSEESSSLAFNAACTEFLQLVKEIHTELANH 112
Query: 67 IKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTIDE 110
I +YR F + Y EIC K++ V QL A+ + +++
Sbjct: 113 IHLVSDYRTFTRSTYGAEKDVEICRDKVKIVSEQLQALSRFLED 156
>gi|147857651|emb|CAN80992.1| hypothetical protein VITISV_021868 [Vitis vinifera]
Length = 190
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 15/60 (25%)
Query: 1 MDSQSQTTSLQRLQNV---------------EKRVVRVLELAGGVMDELANPMGPRKEII 45
+ S S TT ++R Q + +R+++VLELAGGVMDEL NP GPRKE++
Sbjct: 119 ISSGSPTTWIRRPQTLLCNAFKMLKRQFGLGVQRIIKVLELAGGVMDELCNPSGPRKELL 178
>gi|325182265|emb|CCA16719.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325187283|emb|CCA21823.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 139
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
Query: 10 LQRLQNVEKRVVRVLELAGGVMDELANPMGPRK-------EIINNHCREFMQLIKDIQVT 62
LQ L+ EK++V +L A ++ L P++ + EF+QLIK++
Sbjct: 23 LQALEAAEKKLVSILRTAATAVNHLV----PQRTGEDSSSIAFSTSSTEFLQLIKEVHGE 78
Query: 63 LRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTIDE 110
L D+I +YR + + YS EI +K+ + QL ++ +DE
Sbjct: 79 LADQIHLVSDYRAYGRSAYSAEKDMEITLEKVRLISEQLKSLSSYLDE 126
>gi|297828598|ref|XP_002882181.1| hypothetical protein ARALYDRAFT_896106 [Arabidopsis lyrata subsp.
lyrata]
gi|297328021|gb|EFH58440.1| hypothetical protein ARALYDRAFT_896106 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 1 MDSQSQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMG 39
MD Q+Q TSL R+QNVEK V LEL GVM++L +P G
Sbjct: 1 MDPQTQNTSLPRVQNVEKGVSD-LELGEGVMEKLVSPSG 38
>gi|156403674|ref|XP_001640033.1| predicted protein [Nematostella vectensis]
gi|156227165|gb|EDO47970.1| predicted protein [Nematostella vectensis]
Length = 116
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 10 LQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQVTLRDEIK- 68
L++L+ +EK +V+V++ AG + EL+N P ++++N EF++ ++ ++ L ++I
Sbjct: 8 LKQLEEIEKDIVKVMQSAGETIAELSNE-NPSEDMVNMKATEFVKSLEGVEKGLTEQINY 66
Query: 69 --SACEYRPFEKCDYSTRILNEICCKKLEYVLSQL 101
+P E Y E+ + V QL
Sbjct: 67 LTQVATGQPHEGSTYGVDKDFELATSRTAIVKGQL 101
>gi|330841980|ref|XP_003292965.1| hypothetical protein DICPUDRAFT_83566 [Dictyostelium purpureum]
gi|325076755|gb|EGC30517.1| hypothetical protein DICPUDRAFT_83566 [Dictyostelium purpureum]
Length = 152
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 9 SLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNH-----CREFMQLIK-DIQVT 62
SL L N+E++VV + A +D L++ + N + F ++K DI
Sbjct: 3 SLSILNNIEEKVVDAINTAALSIDSLSDSLNVEDSPENFNRFQSLSDRFYSIVKKDIHKG 62
Query: 63 LRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTI 108
L D I S + PF+ Y + ++ E +LS LD + I
Sbjct: 63 LIDFIDSMTDIAPFDHSSYLKKAELDVSHSFTEIILSHLDDLNTII 108
>gi|358336329|dbj|GAA54870.1| mediator of RNA polymerase II transcription subunit 11
[Clonorchis sinensis]
Length = 115
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 6 QTTSLQ----RLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQV 61
QT SL+ RL VE++++ +++ AG +DEL+ P + + NH F ++K+++
Sbjct: 10 QTVSLEARLSRLDEVERKIMLIMQHAGNALDELSKDR-PTVKQVENHTHNFRVVLKEVET 68
Query: 62 TLRDEIKSACEYR---PFEKCDYSTRI 85
+ I + P+E Y+ I
Sbjct: 69 EMNAHISYLNQISAGLPYEGTTYAEAI 95
>gi|116783296|gb|ABK22878.1| unknown [Picea sitchensis]
Length = 115
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 31 MDELANPMGPRKEIINNHCREFMQLIK 57
M+E AN GPR + ++N CREF+ IK
Sbjct: 1 MEEFANASGPRMDAVDNQCREFIGSIK 27
>gi|281204886|gb|EFA79080.1| putative mediator complex subunit 11 [Polysphondylium pallidum
PN500]
Length = 113
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 10/110 (9%)
Query: 9 SLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLI--------KDIQ 60
SL L N+E RVV + AG ++ L+ + ++ + +EF QL KD+
Sbjct: 3 SLTVLNNIEDRVVESINTAGKALNILSKSLDIKQTTPS--IQEFKQLSDRYFNIVEKDVY 60
Query: 61 VTLRDEIKSACEYRPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTIDE 110
L + + S + PF+ YS + ++ E +L L+ M++ + E
Sbjct: 61 KGLMEFVDSMTDVAPFDHSSYSNKCELDVSHNFTEIILLHLEEMEEILKE 110
>gi|256071716|ref|XP_002572185.1| hypothetical protein [Schistosoma mansoni]
gi|350646070|emb|CCD59247.1| hypothetical protein Smp_006980 [Schistosoma mansoni]
Length = 115
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 14/116 (12%)
Query: 2 DSQ---SQTTSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKD 58
DSQ S + L +L VE+++ +++ AG ++EL+ P + + + F +IK+
Sbjct: 7 DSQVEASLESRLNKLDEVERKISLIIQHAGSALEELSKD-KPTVKQVESCTHNFRTVIKE 65
Query: 59 IQVTLRDEIKSACEYR---PFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTIDEC 111
++ + I P+E C Y I L L QL A K+ +D C
Sbjct: 66 VETEMNSHINYLSHISAGLPYEGCTYDKAI-------DLYQTLDQLVAAKRRLDSC 114
>gi|45361611|ref|NP_989379.1| mediator of RNA polymerase II transcription subunit 11 [Xenopus
(Silurana) tropicalis]
gi|82186197|sp|Q6P255.1|MED11_XENTR RecName: Full=Mediator of RNA polymerase II transcription subunit
11; AltName: Full=Mediator complex subunit 11
gi|40352942|gb|AAH64722.1| mediator of RNA polymerase II transcription subunit 11 [Xenopus
(Silurana) tropicalis]
Length = 118
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 10 LQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQVTLRDEIKS 69
L+ L+ +E+ + +L AG V+ EL+ P + +++ +F ++ ++ L +I+
Sbjct: 11 LRALEEIEREIAAILLNAGNVILELSKEK-PNERVLDKQATQFTASVQRVESELSGQIRY 69
Query: 70 ACEY---RPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTIDE 110
+ +P E YS R + +++Y +L + +T D+
Sbjct: 70 LTQVATGQPHEGSSYSARKDGTMALNRIDYARVKLAELSRTCDQ 113
>gi|332031472|gb|EGI70956.1| hypothetical protein G5I_00228 [Acromyrmex echinatior]
Length = 266
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 33/76 (43%)
Query: 26 LAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQVTLRDEIKSACEYRPFEKCDYSTRI 85
LA V+D + + P +E + EF+ +I++ D I+ A + C T
Sbjct: 96 LAATVIDTIEDSQEPYQEDNREYLSEFLNIIQNRTSNTHDTIRPAIRTEIYNYCKTRTIT 155
Query: 86 LNEICCKKLEYVLSQL 101
LN I KL Y+ L
Sbjct: 156 LNNIDINKLHYITDYL 171
>gi|126309266|ref|XP_001370756.1| PREDICTED: mediator of RNA polymerase II transcription subunit
11-like [Monodelphis domestica]
Length = 117
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 10 LQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQVTLRDEIKS 69
L+ L+++E+ + +L+ AG V+ EL+ + +++ F ++ ++ L +I+
Sbjct: 11 LRALEDIEREIGTILQSAGNVILELSKEKANER-LLDRQAAAFTSSVQHVEAELSAQIRY 69
Query: 70 ACEY---RPFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTIDECNDT 114
+ +P E YS+R ++ K+++Y +L + +T ++ +T
Sbjct: 70 LTQVATGQPHESSSYSSRKDCQMALKRVDYARLKLSELARTCEQVLET 117
>gi|226466664|emb|CAX69467.1| Mediator complex subunit 11 [Schistosoma japonicum]
Length = 115
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 11/107 (10%)
Query: 8 TSLQRLQNVEKRVVRVLELAGGVMDELANPMGPRKEIINNHCREFMQLIKDIQVTLRDEI 67
+ L +L VE++V +++ AG ++EL+ P + + + F +IK+++ + I
Sbjct: 16 SRLSKLDEVERKVSLIMQHAGSALEELSKD-KPMVKQVESCTHNFRTVIKEVETEMNSHI 74
Query: 68 KSACEYR---PFEKCDYSTRILNEICCKKLEYVLSQLDAMKQTIDEC 111
+ P+E C Y I L L +L A K+ +D C
Sbjct: 75 NYLSQISAGLPYEGCTYDQAI-------DLYQALDRLVAAKRRLDSC 114
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.134 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,498,447,911
Number of Sequences: 23463169
Number of extensions: 49042355
Number of successful extensions: 129266
Number of sequences better than 100.0: 74
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 129217
Number of HSP's gapped (non-prelim): 74
length of query: 115
length of database: 8,064,228,071
effective HSP length: 82
effective length of query: 33
effective length of database: 6,140,248,213
effective search space: 202628191029
effective search space used: 202628191029
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)