BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033628
(115 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8RV04|TI141_ARATH Mitochondrial import inner membrane translocase subunit TIM14-1
OS=Arabidopsis thaliana GN=TIM14-1 PE=3 SV=1
Length = 112
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 86/109 (78%), Positives = 97/109 (88%)
Query: 7 PLIAGMAVAAAAYAGKYGIRAWQAFKARPPTARMRKFYEGGFQPVMTRREAALILGVRES 66
P IAG+AVAA A AG+YGI+AWQAFKARPP +++KFYEGGFQP MT+REAALILGVRES
Sbjct: 4 PFIAGVAVAATALAGRYGIQAWQAFKARPPRPKIKKFYEGGFQPTMTKREAALILGVRES 63
Query: 67 TPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLRRTKGSNSAF 115
EKVKEAHR+VMVANHPDAGGSH+LASKINEAKD+ML +TK S SAF
Sbjct: 64 VAAEKVKEAHRKVMVANHPDAGGSHFLASKINEAKDVMLGKTKNSGSAF 112
>sp|Q9SF33|TI142_ARATH Mitochondrial import inner membrane translocase subunit TIM14-2
OS=Arabidopsis thaliana GN=TIM14-2 PE=3 SV=1
Length = 112
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/94 (82%), Positives = 80/94 (85%)
Query: 22 KYGIRAWQAFKARPPTARMRKFYEGGFQPVMTRREAALILGVRESTPTEKVKEAHRRVMV 81
KYGI AWQAFK RP RMRKFYEGGFQ M RREAALILGVRES EKVKEAHRRVMV
Sbjct: 19 KYGIEAWQAFKLRPVRPRMRKFYEGGFQATMNRREAALILGVRESVAAEKVKEAHRRVMV 78
Query: 82 ANHPDAGGSHYLASKINEAKDIMLRRTKGSNSAF 115
ANHPDAGGSHYLASKINEAKD+ML +TK S SAF
Sbjct: 79 ANHPDAGGSHYLASKINEAKDMMLGKTKNSGSAF 112
>sp|Q9LYY2|TI143_ARATH Mitochondrial import inner membrane translocase subunit TIM14-3
OS=Arabidopsis thaliana GN=TIM14-3 PE=3 SV=1
Length = 112
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 87/109 (79%), Positives = 94/109 (86%)
Query: 7 PLIAGMAVAAAAYAGKYGIRAWQAFKARPPTARMRKFYEGGFQPVMTRREAALILGVRES 66
P+IAG AVAAAA AG+YGI AWQAFKARP RMR+FYEGGFQ MTRREAALILGVRES
Sbjct: 4 PMIAGAAVAAAAVAGRYGILAWQAFKARPRVPRMRRFYEGGFQSSMTRREAALILGVRES 63
Query: 67 TPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLRRTKGSNSAF 115
+KVKEAHRRVMVANHPDAGGSHYLASKINEAKD+ML ++ S SAF
Sbjct: 64 VVADKVKEAHRRVMVANHPDAGGSHYLASKINEAKDMMLGKSNNSGSAF 112
>sp|Q3ZBN8|TIM14_BOVIN Mitochondrial import inner membrane translocase subunit TIM14
OS=Bos taurus GN=DNAJC19 PE=3 SV=3
Length = 116
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 72/102 (70%), Gaps = 8/102 (7%)
Query: 11 GMAVAAAAYAGKYGIRAW--------QAFKARPPTARMRKFYEGGFQPVMTRREAALILG 62
G+ +AAA +AG+Y ++A Q F++ P TA +Y GGF+P MT+REAALILG
Sbjct: 9 GLTIAAAGFAGRYALQAMKHMEPQVKQVFQSLPKTAFSGGYYRGGFEPKMTKREAALILG 68
Query: 63 VRESTPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIM 104
V + K+++AHRR+M+ NHPD GGS Y+A+KINEAKD++
Sbjct: 69 VSPTANKAKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLL 110
>sp|Q5RF34|TIM14_PONAB Mitochondrial import inner membrane translocase subunit TIM14
OS=Pongo abelii GN=DNAJC19 PE=3 SV=3
Length = 116
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 72/102 (70%), Gaps = 8/102 (7%)
Query: 11 GMAVAAAAYAGKYGIRAW--------QAFKARPPTARMRKFYEGGFQPVMTRREAALILG 62
G+ +AAA +AG+Y ++A Q F++ P +A +Y GGF+P MT+REAALILG
Sbjct: 9 GLTIAAAGFAGRYVLQAMKHMEPQVKQVFQSLPKSAFSGGYYRGGFEPKMTKREAALILG 68
Query: 63 VRESTPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIM 104
V + K+++AHRR+M+ NHPD GGS Y+A+KINEAKD++
Sbjct: 69 VSPTANKGKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLL 110
>sp|Q96DA6|TIM14_HUMAN Mitochondrial import inner membrane translocase subunit TIM14
OS=Homo sapiens GN=DNAJC19 PE=1 SV=3
Length = 116
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 72/102 (70%), Gaps = 8/102 (7%)
Query: 11 GMAVAAAAYAGKYGIRAW--------QAFKARPPTARMRKFYEGGFQPVMTRREAALILG 62
G+ +AAA +AG+Y ++A Q F++ P +A +Y GGF+P MT+REAALILG
Sbjct: 9 GLTIAAAGFAGRYVLQAMKHMEPQVKQVFQSLPKSAFSGGYYRGGFEPKMTKREAALILG 68
Query: 63 VRESTPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIM 104
V + K+++AHRR+M+ NHPD GGS Y+A+KINEAKD++
Sbjct: 69 VSPTANKGKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLL 110
>sp|Q5RCP4|DJC15_PONAB DnaJ homolog subfamily C member 15 OS=Pongo abelii GN=DNAJC15 PE=2
SV=1
Length = 150
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 73/113 (64%), Gaps = 8/113 (7%)
Query: 5 VAPLIA-GMAVAAAAYAGKYGIRAWQAFKA-------RPPTARMRKFYEGGFQPVMTRRE 56
V LIA G+ VAA A+AG+Y R W+ + + T + +Y+GGF+ M+RRE
Sbjct: 37 VRSLIAVGLGVAAFAFAGRYAFRIWKPLEQVITETAKKISTPSLSSYYKGGFEKKMSRRE 96
Query: 57 AALILGVRESTPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLRRTK 109
A LILGV S K++ AHRRVM+ NHPD GGS Y+A+KINEAKD++ TK
Sbjct: 97 AGLILGVSPSAGKAKIRTAHRRVMILNHPDKGGSPYVAAKINEAKDLLETTTK 149
>sp|Q9Y5T4|DJC15_HUMAN DnaJ homolog subfamily C member 15 OS=Homo sapiens GN=DNAJC15 PE=1
SV=2
Length = 150
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 72/113 (63%), Gaps = 8/113 (7%)
Query: 5 VAPLIA-GMAVAAAAYAGKYGIRAWQAFKA-------RPPTARMRKFYEGGFQPVMTRRE 56
V LIA G+ VAA A+AG+Y R W+ + + T +Y+GGF+ M+RRE
Sbjct: 37 VRSLIAVGLGVAALAFAGRYAFRIWKPLEQVITETAKKISTPSFSSYYKGGFEQKMSRRE 96
Query: 57 AALILGVRESTPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLRRTK 109
A LILGV S K++ AHRRVM+ NHPD GGS Y+A+KINEAKD++ TK
Sbjct: 97 AGLILGVSPSAGKAKIRTAHRRVMILNHPDKGGSPYVAAKINEAKDLLETTTK 149
>sp|Q78YY6|DJC15_MOUSE DnaJ homolog subfamily C member 15 OS=Mus musculus GN=Dnajc15 PE=2
SV=1
Length = 149
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 71/105 (67%), Gaps = 9/105 (8%)
Query: 8 LIAGMAVAAAAYAGKYGIRAWQAFKARPPTARMRK--------FYEGGFQPVMTRREAAL 59
L G+ VAA A+AG+Y + W+ + + TA RK +Y+GGF+ M++REA+L
Sbjct: 39 LAVGLGVAAVAFAGRYAFQIWKPLE-QVITATARKISSPSFSSYYKGGFEQKMSKREASL 97
Query: 60 ILGVRESTPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIM 104
ILGV S K++ AH+R+M+ NHPD GGS YLASKINEAKD++
Sbjct: 98 ILGVSPSAGKAKIRTAHKRIMILNHPDKGGSPYLASKINEAKDLL 142
>sp|Q6PBT7|TIM14_DANRE Mitochondrial import inner membrane translocase subunit TIM14
OS=Danio rerio GN=dnajc19 PE=2 SV=1
Length = 115
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 68/102 (66%), Gaps = 9/102 (8%)
Query: 11 GMAVAAAAYAGKYGIRAW--------QAFKARPPTARMRKFYEGGFQPVMTRREAALILG 62
G+ +AAA + G+Y +RA QA +A +A +Y GGF P M RREA+LILG
Sbjct: 9 GLTLAAAGFTGRYAVRAMKHMEPQVKQALEA-SKSAFGSGYYRGGFDPKMNRREASLILG 67
Query: 63 VRESTPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIM 104
V + K++EAHR++M+ NHPD GGS YLA+KINEAKD++
Sbjct: 68 VSPTANKTKIREAHRKLMILNHPDRGGSPYLAAKINEAKDLL 109
>sp|Q9VTJ8|TIM14_DROME Mitochondrial import inner membrane translocase subunit TIM14
OS=Drosophila melanogaster GN=Tim14 PE=3 SV=2
Length = 118
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 71/109 (65%), Gaps = 12/109 (11%)
Query: 8 LIAGMAVAAAAYAGKYGIRAW--------QAFKARP----PTARMRKFYEGGFQPVMTRR 55
++AG++VAA +AGK+ +R +A K P + K+Y+GGF P M +R
Sbjct: 6 ILAGLSVAAVGFAGKHLMRRMPQMTTKFNEALKNLPKYDAESMAASKYYKGGFDPKMNKR 65
Query: 56 EAALILGVRESTPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIM 104
EA+LILGV S K+K+AH+++M+ NHPD GGS YLA+KINEAKD +
Sbjct: 66 EASLILGVSPSASKIKIKDAHKKIMLLNHPDRGGSPYLAAKINEAKDFL 114
>sp|Q9CQV7|TIM14_MOUSE Mitochondrial import inner membrane translocase subunit TIM14
OS=Mus musculus GN=Dnajc19 PE=2 SV=3
Length = 116
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 72/102 (70%), Gaps = 8/102 (7%)
Query: 11 GMAVAAAAYAGKYGIRAW--------QAFKARPPTARMRKFYEGGFQPVMTRREAALILG 62
G+ +AAA +AG+Y ++A Q F++ P +A +Y GGF+P MT+REAALILG
Sbjct: 9 GLTIAAAGFAGRYVLQAMKHVEPQVKQVFQSLPKSAFGGGYYRGGFEPKMTKREAALILG 68
Query: 63 VRESTPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIM 104
V + K+++AHRR+M+ NHPD GGS Y+A+KINEAKD++
Sbjct: 69 VSPTANKGKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLL 110
>sp|Q5B4H1|TIM14_EMENI Mitochondrial import inner membrane translocase subunit tim14
OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=pam18 PE=3 SV=1
Length = 105
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 70/102 (68%), Gaps = 2/102 (1%)
Query: 8 LIAGMAVAAAAYAGKYGIRAWQAFKARPPTARMRKFYEGGFQPVMTRREAALILGVREST 67
L G+ VA AA+ G+ G+ A++ K A + FY+GGF+P M RREAALIL + E T
Sbjct: 5 LTLGLGVATAAFLGRAGLVAYRRSKG-GVNALGKAFYKGGFEPRMNRREAALILELPERT 63
Query: 68 PT-EKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLRRT 108
EKV++ HR++M+ NHPD GGS YLA+KINEAK+ + + T
Sbjct: 64 LNKEKVRKKHRQLMLLNHPDRGGSPYLATKINEAKEFLDKHT 105
>sp|Q617M0|TIM14_CAEBR Mitochondrial import inner membrane translocase subunit TIM14
OS=Caenorhabditis briggsae GN=dnj-21 PE=3 SV=1
Length = 111
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 63/101 (62%), Gaps = 4/101 (3%)
Query: 8 LIAGMAVAAAAYAGKYGIRAWQAFK----ARPPTARMRKFYEGGFQPVMTRREAALILGV 63
+ AG+ +AA + +Y +R K A P + +Y GGF M+R EAA ILG+
Sbjct: 6 IAAGLGLAAVGFGARYVLRNQALIKKGMEALPVAGGLNSYYRGGFDQKMSRSEAAKILGI 65
Query: 64 RESTPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIM 104
S K+K+AH++VM+ NHPD GGS YLA+KINEAKD+M
Sbjct: 66 TPSAKPAKIKDAHKKVMIVNHPDRGGSPYLAAKINEAKDLM 106
>sp|Q4WI88|TIM14_ASPFU Mitochondrial import inner membrane translocase subunit tim14
OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 /
CBS 101355 / FGSC A1100) GN=pam18 PE=3 SV=1
Length = 105
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
Query: 11 GMAVAAAAYAGKYGIRAWQAFKARPPTARMRKFYEGGFQPVMTRREAALILGVRESTPT- 69
G+ VA AA+ G+ G A + ++ A + FY+GGF+P MTRREAALIL + E T
Sbjct: 8 GLGVATAAFLGRAGYVALRRYQG-GINAMGKAFYKGGFEPRMTRREAALILELPERTLNK 66
Query: 70 EKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIM 104
EKV++ HR++M+ NHPD GGS YLA+KINEAK+ +
Sbjct: 67 EKVRKKHRQLMLLNHPDRGGSPYLATKINEAKEFL 101
>sp|Q9UT37|TIM14_SCHPO Mitochondrial import inner membrane translocase subunit tim14
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pam18 PE=3 SV=1
Length = 140
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 68/98 (69%), Gaps = 3/98 (3%)
Query: 8 LIAGMAVAAAAYAGKYGIRAWQAFKARPPTARMRKFYEGGFQPVMTRREAALILGVREST 67
++ G+ +AA A AGK G+ A++ + R ++ F +GGF+ M+R EA IL + T
Sbjct: 5 ILLGVGIAATAAAGKIGVDAFRKY--RNLNGGVKAFLKGGFESKMSRAEAIQILSLNNRT 62
Query: 68 PT-EKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIM 104
T +K+KEAHRR+M+ANHPD GGS Y+ASK+NEAK ++
Sbjct: 63 LTRQKIKEAHRRLMLANHPDRGGSPYVASKVNEAKSLL 100
>sp|Q6DDA1|DJC15_XENTR DnaJ homolog subfamily C member 15 OS=Xenopus tropicalis GN=dnajc15
PE=2 SV=1
Length = 149
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%)
Query: 36 PTARMRKFYEGGFQPVMTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGSHYLAS 95
PT + +Y+GGF+ M RREA+LILGV S K++ AHR++M+ NHPD GGS Y+A
Sbjct: 75 PTPSLSYYYKGGFEQKMNRREASLILGVSPSASKSKIRAAHRKIMILNHPDKGGSPYMAM 134
Query: 96 KINEAKDIMLRRTK 109
KINEAKD++ TK
Sbjct: 135 KINEAKDLLESTTK 148
>sp|P91454|TIM14_CAEEL Mitochondrial import inner membrane translocase subunit TIM14
OS=Caenorhabditis elegans GN=dnj-21 PE=3 SV=1
Length = 112
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 63/102 (61%), Gaps = 5/102 (4%)
Query: 8 LIAGMAVAAAAYAGKYGIRAWQAFK----ARP-PTARMRKFYEGGFQPVMTRREAALILG 62
++AG+ +AA + +Y +R K A P +Y GGF M+R EAA ILG
Sbjct: 6 IVAGLGLAAVGFGARYVLRNQALIKKGMEAIPVAGGAFSNYYRGGFDQKMSRAEAAKILG 65
Query: 63 VRESTPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIM 104
V S K+KEAH++VM+ NHPD GGS YLA+KINEAKD+M
Sbjct: 66 VAPSAKPAKIKEAHKKVMIVNHPDRGGSPYLAAKINEAKDLM 107
>sp|Q759D2|TIM14_ASHGO Mitochondrial import inner membrane translocase subunit TIM14
OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=PAM18 PE=3 SV=1
Length = 158
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 66/103 (64%), Gaps = 5/103 (4%)
Query: 7 PLIAGMAVAAAAYAGKYGIRAWQAFKARPPTAR-MRKFYEGGFQPVMTRREAALILGVRE 65
P++ G+ A YA G+ W+A R + KF +GGF P M +EA IL + E
Sbjct: 55 PVVGGIGGFVALYAAA-GL--WRAVSIRMNGGKEATKFLKGGFDPKMNTKEALAILNLTE 111
Query: 66 STPTEK-VKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLRR 107
ST T+K VK+ HR++M+ANHPD GGS YLA+KINEAKD + +R
Sbjct: 112 STLTKKRVKDVHRKIMLANHPDKGGSPYLATKINEAKDFLEKR 154
>sp|Q7RX75|TIM14_NEUCR Mitochondrial import inner membrane translocase subunit tim-14
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=pam-18 PE=3 SV=1
Length = 105
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 64/88 (72%), Gaps = 4/88 (4%)
Query: 19 YAGKYGIRAWQAFKARPPTARMRK-FYEGGFQPVMTRREAALILGVRESTPT-EKVKEAH 76
+ G+ G+ AW+ ++R + K FY+GGF+P M ++EA+LIL + E T T +K+++AH
Sbjct: 16 FLGRAGLVAWR--RSRGGVGALGKAFYKGGFEPRMNKKEASLILSLNERTITKDKIRKAH 73
Query: 77 RRVMVANHPDAGGSHYLASKINEAKDIM 104
R +M+ NHPD GGS YLA+K+NEAK+ +
Sbjct: 74 RTLMLLNHPDRGGSPYLATKVNEAKEFL 101
>sp|Q6FPU1|TIM14_CANGA Mitochondrial import inner membrane translocase subunit TIM14
OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=PAM18 PE=3 SV=1
Length = 153
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 65/103 (63%), Gaps = 5/103 (4%)
Query: 7 PLIAGMAVAAAAYAGKYGIRAWQAFKARPPTARM-RKFYEGGFQPVMTRREAALILGVRE 65
P++AG+ A Y G ++ + R + +F +GGF P M +EA IL ++E
Sbjct: 49 PVLAGVGGFLALYVG---AGVYKGVQTRLNGGKAATQFLKGGFDPKMNAKEALQILNLKE 105
Query: 66 ST-PTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLRR 107
+ T+K+KE HR++M+ANHPD GGS YLA+KINEAKD + ++
Sbjct: 106 NNLTTKKLKEVHRKIMLANHPDKGGSPYLATKINEAKDFLEKK 148
>sp|Q54QN1|TIM14_DICDI Mitochondrial import inner membrane translocase subunit TIM14
OS=Dictyostelium discoideum GN=dnajc19 PE=3 SV=1
Length = 113
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 8/113 (7%)
Query: 6 APLIAGMAVAAAAYAGKYGIRAWQAFKARPPTARMR------KFYEGGFQPVMTRREAAL 59
P+I G +A AY+ ++ IR Q K++ + + E GF+ MT EAA
Sbjct: 3 TPIIVGATIAGIAYSSRFLIRVIQRAKSKQLFEMVSTPGFTVETIEDGFENKMTPAEAAN 62
Query: 60 ILGVRESTPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLRRTKGSN 112
ILG++E + E++K H+ +M+ NHPD GGS YLA+KINEA++++ +K SN
Sbjct: 63 ILGLKEESTKEEIKIRHKLLMIKNHPDKGGSSYLATKINEARNVL--SSKNSN 113
>sp|Q07914|TIM14_YEAST Mitochondrial import inner membrane translocase subunit TIM14
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PAM18 PE=1 SV=1
Length = 168
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 62/104 (59%), Gaps = 7/104 (6%)
Query: 7 PLIAGMAVAAAAY--AGKYGIRAWQAFKARPPTARMRKFYEGGFQPVMTRREAALILGVR 64
P+I G Y AG Y + + TA F +GGF P M +EA IL +
Sbjct: 65 PVITGFGAFLTLYFTAGAYKSISKGLNGGKSTTA----FLKGGFDPKMNSKEALQILNLT 120
Query: 65 ESTPTEK-VKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLRR 107
E+T T+K +KE HR++M+ANHPD GGS +LA+KINEAKD + +R
Sbjct: 121 ENTLTKKKLKEVHRKIMLANHPDKGGSPFLATKINEAKDFLEKR 164
>sp|Q4I7T5|TIM14_GIBZE Mitochondrial import inner membrane translocase subunit TIM14
OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC
9075 / NRRL 31084) GN=PAM18 PE=3 SV=1
Length = 105
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 62/88 (70%), Gaps = 4/88 (4%)
Query: 19 YAGKYGIRAWQAFKARPPTARMRK-FYEGGFQPVMTRREAALILGVRESTPT-EKVKEAH 76
+ G+ G+ AW+ ++R M K FY+GGF+ MT++EA LIL + E T +KV++AH
Sbjct: 16 FLGRAGLVAWR--RSRGGVGAMGKAFYKGGFEAKMTKKEATLILSLNERAITKDKVRKAH 73
Query: 77 RRVMVANHPDAGGSHYLASKINEAKDIM 104
R +M+ NHPD GGS YLA+K+NEAK+ +
Sbjct: 74 RTLMLLNHPDRGGSPYLATKVNEAKEFL 101
>sp|Q59SI2|TIM14_CANAL Mitochondrial import inner membrane translocase subunit TIM14
OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=PAM18 PE=3 SV=1
Length = 157
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 64/102 (62%), Gaps = 7/102 (6%)
Query: 7 PLIAGMAVAAAAYAGKYGIRAWQAFKARPPTARMRKFYEGGFQPVMTRREAALILGVRES 66
P+I G+ A AY I++ Q P + F +GGF MT +EA IL ++E+
Sbjct: 56 PVITGIGAFAVAYFAAGFIKSNQ------PGINGKAFVKGGFGAKMTAKEALQILNLKET 109
Query: 67 TPTE-KVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLRR 107
++ K+KE HR++M+ANHPD GGS Y+A+KINEAKD + +R
Sbjct: 110 NLSKLKLKEQHRKLMMANHPDKGGSSYIATKINEAKDFLDKR 151
>sp|Q6BH37|TIM14_DEBHA Mitochondrial import inner membrane translocase subunit TIM14
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=PAM18 PE=3 SV=2
Length = 172
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 63/102 (61%), Gaps = 7/102 (6%)
Query: 7 PLIAGMAVAAAAYAGKYGIRAWQAFKARPPTARMRKFYEGGFQPVMTRREAALILGVRES 66
P + GM V AY A K++ P + F +G F MT +EA IL ++E+
Sbjct: 71 PWMTGMGVLGVAYF------ASGFVKSKQPGINGKAFVKGPFGQKMTPKEALQILNLKET 124
Query: 67 TPTE-KVKEAHRRVMVANHPDAGGSHYLASKINEAKDIMLRR 107
++ K+KE HR++M+ANHPD GGS YLA+K+NEAKDI+ +R
Sbjct: 125 NLSQAKLKEQHRKLMMANHPDKGGSSYLATKVNEAKDILEKR 166
>sp|Q6CNW2|TIM14_KLULA Mitochondrial import inner membrane translocase subunit TIM14
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=PAM18
PE=3 SV=1
Length = 163
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 42 KFYEGGFQPVMTRREAALILGVRESTPTEK-VKEAHRRVMVANHPDAGGSHYLASKINEA 100
K+ +GGF P M +EA IL + E+ ++K +KE HRR+M+ANHPD GGS YLA+KINEA
Sbjct: 93 KYLKGGFDPKMNAKEALAILNLNETNLSKKKLKEVHRRIMLANHPDKGGSPYLATKINEA 152
Query: 101 KDIMLRRT 108
KD + ++
Sbjct: 153 KDFLEKKV 160
>sp|P42834|MDJ2_YEAST Mitochondrial DnaJ homolog 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MDJ2 PE=1 SV=1
Length = 146
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 69/138 (50%), Gaps = 36/138 (26%)
Query: 5 VAPLIAGMAVAAAAYAGKYGIRAWQAFKA--------------RPPTARMR---KF---- 43
V P+I G+ V A + K G+ AW +K PTA R KF
Sbjct: 2 VLPIIIGLGVTMVALSVKSGLNAWTVYKTLSPLTIAKLNNIRIENPTAGYRDALKFKSSL 61
Query: 44 -----------YEGGFQPVMTRREAALILGV--RESTPTEK--VKEAHRRVMVANHPDAG 88
Y+GGF P MT EA LIL + RE ++ +K+ HR+ MV NHPD G
Sbjct: 62 IDEELKNRLNQYQGGFAPRMTEPEALLILDISAREINHLDEKLLKKKHRKAMVRNHPDRG 121
Query: 89 GSHYLASKINEAKDIMLR 106
GS Y+A+KINEAK+++ R
Sbjct: 122 GSPYMAAKINEAKEVLER 139
>sp|Q6CEU0|TIM14_YARLI Mitochondrial import inner membrane translocase subunit TIM14
OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=PAM18 PE=3 SV=1
Length = 148
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 24 GIRAWQAFKARPPTARMRKFYEGGFQPVMTRREAALILGVRESTPT-EKVKEAHRRVMVA 82
G+ A A RP +F++GGF+ M EA IL +R++ T K+K HR++M+
Sbjct: 60 GLYALGAVFKRPAAGARGQFFKGGFENKMGPSEALQILSLRDAGLTMNKLKGQHRKIMLL 119
Query: 83 NHPDAGGSHYLASKINEAKDIMLRR 107
NHPD GGS Y+A+KINEAK ++ +R
Sbjct: 120 NHPDRGGSPYVATKINEAKSVLEKR 144
>sp|Q6MT07|DNAJ_MYCMS Chaperone protein DnaJ OS=Mycoplasma mycoides subsp. mycoides SC
(strain PG1) GN=dnaJ PE=3 SV=1
Length = 372
Score = 38.5 bits (88), Expect = 0.011, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 52 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDIMLRRT 108
M +++ +LGV ++ +++++A+R++ HPD S H +INEA D++L +
Sbjct: 1 MKKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKD 60
Query: 109 K 109
K
Sbjct: 61 K 61
>sp|P71500|DNAJ_MYCCT Chaperone protein DnaJ OS=Mycoplasma capricolum subsp. capricolum
(strain California kid / ATCC 27343 / NCTC 10154)
GN=dnaJ PE=3 SV=2
Length = 372
Score = 38.5 bits (88), Expect = 0.011, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 52 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDIMLRRT 108
M +++ +LGV ++ +++++A+R++ HPD S H +INEA D++L +
Sbjct: 1 MKKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKD 60
Query: 109 K 109
K
Sbjct: 61 K 61
>sp|P42824|DNJH2_ALLPO DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1
Length = 418
Score = 38.1 bits (87), Expect = 0.018, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 60 ILGVRESTPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKDIM 104
+LGV ++ E +K+A+R+ + NHPD GG +I +A +++
Sbjct: 17 VLGVSKNATPEDLKKAYRKAAIKNHPDKGGDPEKFKEIGQAYEVL 61
>sp|Q4I375|TIM16_GIBZE Mitochondrial import inner membrane translocase subunit TIM16
OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC
9075 / NRRL 31084) GN=PAM16 PE=3 SV=1
Length = 138
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 52 MTRREAALILGVRE----STPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKD 102
MT EA IL V+ E+V ++R+ AN P GGS YL SKI AK+
Sbjct: 54 MTLDEACKILNVKPPAGGQANVEEVLSRYKRLFDANDPQKGGSFYLQSKIVRAKE 108
>sp|Q04960|DNJH_CUCSA DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1
Length = 413
Score = 37.7 bits (86), Expect = 0.022, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 14/72 (19%)
Query: 33 ARPPTARMRKFYEGGFQPVMTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGSHY 92
RP + K+YE ILGV ++ + +K+A+R+ + NHPD GG
Sbjct: 3 GRPKKSDNTKYYE--------------ILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPE 48
Query: 93 LASKINEAKDIM 104
++ +A +++
Sbjct: 49 KFKELAQAYEVL 60
>sp|Q3SIN3|DNAJ_THIDA Chaperone protein DnaJ OS=Thiobacillus denitrificans (strain ATCC
25259) GN=dnaJ PE=3 SV=1
Length = 372
Score = 37.4 bits (85), Expect = 0.026, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 52 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAG-GSHYLASKINEAK 101
M++R+ +LGV ++ E++K+A+R++ + +HPD G H K EAK
Sbjct: 1 MSKRDYYEVLGVAKNASDEEIKKAYRKLAMKHHPDRNPGDHAAEDKFKEAK 51
>sp|Q9PQ82|DNAJ_UREPA Chaperone protein DnaJ OS=Ureaplasma parvum serovar 3 (strain ATCC
700970) GN=dnaJ PE=3 SV=1
Length = 375
Score = 37.4 bits (85), Expect = 0.027, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 52 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGS--HYLASKINEAKDIM 104
M +R+ ILGV +S E++K A R++ +HPD S L +INEA +++
Sbjct: 1 MAKRDYYEILGVSKSATPEEIKAAFRKLAKEHHPDRNKSADDTLFKEINEAYEVL 55
>sp|Q7S6S4|TIM16_NEUCR Mitochondrial import inner membrane translocase subunit tim-16
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=pam-16 PE=3 SV=1
Length = 141
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 52 MTRREAALILGVRE-----STPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKD 102
MT EA IL V + + E+V E +R+ AN P+ GGS YL SK+ A++
Sbjct: 55 MTLDEACKILNVNKPADGTAANMEEVMERFKRLFDANDPEKGGSFYLQSKVVRARE 110
>sp|Q6LV37|DJLA_PHOPR DnaJ-like protein DjlA OS=Photobacterium profundum GN=djlA PE=3
SV=1
Length = 277
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 46 GGFQPVMTRREAA---LILGVRESTPTEKVKEAHRRVMVANHPD 86
GGF TR + A +LGV ES +++VK A+R+ M +HPD
Sbjct: 198 GGFNQAPTRDQLADAYEVLGVTESATSQEVKRAYRKQMNEHHPD 241
>sp|Q7N8V3|DJLA_PHOLL DnaJ-like protein DjlA OS=Photorhabdus luminescens subsp. laumondii
(strain TT01) GN=djlA PE=3 SV=1
Length = 273
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 46 GGFQPVM---TRREAALILGVRESTPTEKVKEAHRRVMVANHPD 86
GG+Q T +A +LGVRE +K A+RR+M +HPD
Sbjct: 194 GGYQKAAQGPTLADACKVLGVREKDDATTIKRAYRRLMSEHHPD 237
>sp|Q6F150|DNAJ_MESFL Chaperone protein DnaJ OS=Mesoplasma florum (strain ATCC 33453 /
NBRC 100688 / NCTC 11704 / L1) GN=dnaJ PE=3 SV=1
Length = 374
Score = 35.8 bits (81), Expect = 0.083, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 52 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPD---AGGSHYLASKINEAKDIMLRRT 108
M +R+ +LGV +++ +++K A+R++ HPD G+ ++NEA ++L
Sbjct: 1 MAKRDYYEVLGVSKTSTEQEIKSAYRKLAKKYHPDMNKESGAEEKFKEVNEAASVLLDAD 60
Query: 109 K 109
K
Sbjct: 61 K 61
>sp|P44607|DJLA_HAEIN DnaJ-like protein DjlA OS=Haemophilus influenzae (strain ATCC 51907
/ DSM 11121 / KW20 / Rd) GN=djlA PE=3 SV=1
Length = 288
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 46 GGFQPVM--TRREAALILGVRESTPTEKVKEAHRRVMVANHPD 86
GG+Q T +A +LGV ES VK A+RR+M +HPD
Sbjct: 210 GGYQHASGPTLNDAYKVLGVTESDEQSTVKRAYRRLMNEHHPD 252
>sp|Q5XGJ0|TIM16_XENTR Mitochondrial import inner membrane translocase subunit tim16
OS=Xenopus tropicalis GN=pam16 PE=2 SV=1
Length = 125
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 52 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKD 102
++ +EA IL V + TP E++++ + + N + GGS YL SK+ AK+
Sbjct: 54 ISLQEAQQILNVSKLTP-EEIQKNYEHLFKVNDKEVGGSFYLQSKVVRAKE 103
>sp|A6T225|DNAJ_JANMA Chaperone protein DnaJ OS=Janthinobacterium sp. (strain Marseille)
GN=dnaJ PE=3 SV=1
Length = 374
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 52 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAG-GSHYLASKINEAKD 102
M +R+ ILGV +S E++K+A+R++ + +HPD S K EAK+
Sbjct: 1 MAKRDFYEILGVGKSASDEEIKKAYRKLAMKHHPDRNPDSKGAEDKFKEAKE 52
>sp|B5YAR4|DNAJ_DICT6 Chaperone protein DnaJ OS=Dictyoglomus thermophilum (strain ATCC
35947 / DSM 3960 / H-6-12) GN=dnaJ PE=3 SV=1
Length = 390
Score = 34.7 bits (78), Expect = 0.18, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 53 TRREAALILGVRESTPTEKVKEAHRRVMVANHPDAG---GSHYLASKINEAKDIM 104
T+++ ILGV + +++K+A+RR++ HPD +H +INEA +++
Sbjct: 3 TKKDYYEILGVPRNATQDEIKQAYRRLVRQYHPDLNKDPSAHEKFKEINEAYEVL 57
>sp|Q5WHG0|DNAJ_BACSK Chaperone protein DnaJ OS=Bacillus clausii (strain KSM-K16) GN=dnaJ
PE=3 SV=1
Length = 372
Score = 34.7 bits (78), Expect = 0.18, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 52 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKD 102
M++R+ +LGV + E+VK+A+R++ HPD +K E K+
Sbjct: 1 MSKRDYYEVLGVDRNASVEEVKKAYRKLARKYHPDVNKEEDAEAKFKEVKE 51
>sp|Q54M21|DNJC3_DICDI DnaJ homolog subfamily C member 3 homolog OS=Dictyostelium
discoideum GN=dnajc3 PE=3 SV=1
Length = 502
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 26/38 (68%)
Query: 49 QPVMTRREAALILGVRESTPTEKVKEAHRRVMVANHPD 86
Q + R++ ILG+++S E++K+A +++ + NHPD
Sbjct: 383 QQMAKRKDYYKILGIQKSATPEEIKKAFKKLAIKNHPD 420
>sp|A7GT07|DNAJ_BACCN Chaperone protein DnaJ OS=Bacillus cereus subsp. cytotoxis (strain
NVH 391-98) GN=dnaJ PE=3 SV=1
Length = 366
Score = 34.3 bits (77), Expect = 0.20, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 28/51 (54%)
Query: 52 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKD 102
M++R+ +LGV +S +++K+A+RR+ HPD K E ++
Sbjct: 1 MSKRDYYEVLGVSKSASKDEIKKAYRRLAKKYHPDVSKEENAVEKFKEVQE 51
>sp|Q5B187|TIM16_EMENI Mitochondrial import inner membrane translocase subunit tim16
OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=pam16 PE=3 SV=1
Length = 135
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 52 MTRREAALILGVRE----STPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKD 102
+T EA IL V+ T E+V E +++ N P GGS YL SKI A++
Sbjct: 50 ITLDEACKILNVKPPQAGETNLEQVMERFKKLFDLNDPQKGGSFYLQSKILRARE 104
>sp|B3CVD9|DNAJ_ORITI Chaperone protein DnaJ OS=Orientia tsutsugamushi (strain Ikeda)
GN=dnaJ PE=3 SV=1
Length = 377
Score = 34.3 bits (77), Expect = 0.21, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 52 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGSHYLASK----INEAKDIMLRR 107
M+ + +LGV + E++K A+R++++ HPD A + INEA DI+
Sbjct: 1 MSELDYYQVLGVSRTASQEEIKRAYRKLVLKYHPDHNPGDKNAEQKIKNINEAYDILKDE 60
Query: 108 TKGS 111
K S
Sbjct: 61 KKRS 64
>sp|Q6PBL0|TIM16_DANRE Mitochondrial import inner membrane translocase subunit tim16
OS=Danio rerio GN=pam16 PE=2 SV=1
Length = 129
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 52 MTRREAALILGVRESTPTEKVKEAHRRVMVANHPDAGGSHYLASKINEAKD 102
MT +EA IL + TP E++++ + + N GGS Y+ SK+ AK+
Sbjct: 54 MTLQEAQQILNISTLTP-EEIQKNYEHLFKVNDKAVGGSFYIQSKVVRAKE 103
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.130 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,440,931
Number of Sequences: 539616
Number of extensions: 1468252
Number of successful extensions: 4046
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 341
Number of HSP's successfully gapped in prelim test: 169
Number of HSP's that attempted gapping in prelim test: 3677
Number of HSP's gapped (non-prelim): 512
length of query: 115
length of database: 191,569,459
effective HSP length: 83
effective length of query: 32
effective length of database: 146,781,331
effective search space: 4697002592
effective search space used: 4697002592
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)