BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033630
(115 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O23262|RLF32_ARATH Protein RALF-like 32 OS=Arabidopsis thaliana GN=RALFL32 PE=3 SV=1
Length = 117
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 7/101 (6%)
Query: 16 LILALLLFNKAATARSSNICNGSIAECS-----EEIEMFMESDISRRFLEERKKYITPGA 70
L LLL + + A SS++CNGS+AECS EE+ + MES S+R EE+ ++ GA
Sbjct: 15 FFLCLLLAHVTSKASSSSLCNGSVAECSSMVETEEMSVIMESWSSQRLTEEQAHKLSYGA 74
Query: 71 LKPDQPVCSVGGRGDAYSKSGGCLPPRSNRDTRGCPAYYRC 111
L+ +QP C G RG++YS CLPP SN +RGC +YRC
Sbjct: 75 LRRNQPACDGGKRGESYSTQ--CLPPPSNPYSRGCSKHYRC 113
>sp|Q8L9P8|RLF33_ARATH Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1
Length = 116
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 17 ILALLLFNKAATARSS-------NICNGSIAECS---EEIEMFMESDISRRFLEERKKYI 66
IL + A T++SS + CNG+IAECS E E M+S+I+RR L KYI
Sbjct: 15 ILTVHFLFAAVTSQSSGDFVPIESKCNGTIAECSLSTAEEEFEMDSEINRRILAT-TKYI 73
Query: 67 TPGALKPDQPVCSVGGRGDAYSKSGGCLPPRSNRDTRGCPAYYRCR 112
+ GAL+ + CS G + G ++N +RGC A RCR
Sbjct: 74 SYGALRRNTVPCSRRGASYYNCRRGA----QANPYSRGCSAITRCR 115
>sp|Q945T0|RALF_TOBAC Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1
Length = 115
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 8/93 (8%)
Query: 23 FNKAATARSSNICNGSIAEC-SEEIEMFMESDISRRFLEERKKYITPGALKPDQPVCSVG 81
++ ARS C GSI EC +EE E ++S+ +RR L KKYI+ GAL+ + CS
Sbjct: 29 YDWVMPARSGGGCKGSIGECIAEEEEFELDSESNRRILAT-KKYISYGALQKNSVPCSR- 86
Query: 82 GRGDAYSKSGGCLP-PRSNRDTRGCPAYYRCRS 113
RG +Y C P ++N +RGC A RCRS
Sbjct: 87 -RGASYYN---CKPGAQANPYSRGCSAITRCRS 115
>sp|Q9SRY3|RLF1_ARATH Protein RALF-like 1 OS=Arabidopsis thaliana GN=RALF1 PE=1 SV=1
Length = 120
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 26 AATARSSNICNGSIAECSEEIEMFMESDISRRFLEERKKYITPGALKPDQPVCSVGGRGD 85
A T + + C+GSIAEC E M+S+I+RR L KYI+ +LK + CS G
Sbjct: 38 ATTGDNGSGCHGSIAECIGAEEEEMDSEINRRILAT-TKYISYQSLKRNSVPCSRRGASY 96
Query: 86 AYSKSGGCLPPRSNRDTRGCPAYYRCRS 113
++G P S RGC RCRS
Sbjct: 97 YNCQNGAQANPYS----RGCSKIARCRS 120
>sp|Q9FZA0|RLF4_ARATH Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1
Length = 110
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 10 LHLSSCLILALLLFNKAATARSSNIC---NGSIAECSEEIEMFMESDISRRFLEERKKYI 66
L + LILA++ + AT + C G I E +E+E M+S+ +RR L ++YI
Sbjct: 6 LLIFGLLILAMVAKSVNATYPLTKSCINGQGCIGE-DDELESLMDSETNRRQLARGRRYI 64
Query: 67 TPGALKPDQPVCSVGGRGDAYSKSGGCLPPRSNRDTRGCPAYYRC 111
ALK + CS GR K R+N RGC A C
Sbjct: 65 GYDALKKNNVPCSRRGRSYYDCKK----RRRNNPYRRGCSAITHC 105
>sp|Q9LUS7|RLF23_ARATH Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23
PE=1 SV=1
Length = 138
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 32/124 (25%)
Query: 16 LILALLLFNKAATARSSNI----------CNGSIAECSEEI------EMFM--------- 50
LILA+ ++ A +++S+ C G+IAECS ++F
Sbjct: 18 LILAVHNWSVAVSSQSTEFAGDFPPFETECRGTIAECSVSAALGDGGDLFYGGGEMGEEF 77
Query: 51 --ESDISRRFLEERKKYITPGALKPDQPVCSVGGRGDAYSKSGGCLPPRSNRDTRGCPAY 108
+S+I+RR L R+ YI+ GAL+ + CS G + G P S RGC A
Sbjct: 78 EMDSEINRRILATRR-YISYGALRRNTIPCSRRGASYYNCRRGAQANPYS----RGCSAI 132
Query: 109 YRCR 112
RCR
Sbjct: 133 TRCR 136
>sp|Q6NME6|RLF19_ARATH Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1
Length = 110
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 45 EIEMFMESDISRRFLEERKKYITPGALKPDQPVCSVGGRGDAYSKSGGCLPPRSNRDTRG 104
E++ M+S+ +RR L R+ YI+ GAL+ + CS GR K R+N RG
Sbjct: 43 ELDYLMDSETNRRQLAARRSYISYGALRKNNVPCSRRGRSYYDCKK----RKRANPYRRG 98
Query: 105 CPAYYRC 111
C C
Sbjct: 99 CSVITHC 105
>sp|Q9MA62|RLF22_ARATH Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1
Length = 119
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 21 LLFNKAATARSSNICNGSIA-ECSEEIEMFMESDISRRFLEERKKYITPGALKPDQPVCS 79
L F +A ++ + C GSIA +EE EM +SDISRR L + KKYI+ GA++ + CS
Sbjct: 31 LDFVRAGSSSLFSGCTGSIAECIAEEEEMEFDSDISRRILAQ-KKYISYGAMRRNSVPCS 89
Query: 80 VGGRGDAYSKSGGCLPPRSNRDTRGCPAYYRCR 112
G + G P S RGC RCR
Sbjct: 90 RRGASYYNCQRGAQANPYS----RGCSTITRCR 118
>sp|Q2HIM9|RLF31_ARATH Protein RALF-like 31 OS=Arabidopsis thaliana GN=RALFL31 PE=3 SV=1
Length = 113
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 11/105 (10%)
Query: 13 SSCLILALLLFNKAATARSSNICNGSIA------ECSEEIEMFMESDISRRFLEERKKYI 66
++ +I A+L +A A NG I E E M ++ISRR L +K+YI
Sbjct: 5 TALVIFAILFLLISADAFPIPSPNGEIDAMLIRNSIIGEDEDLMPTEISRRVLMAQKRYI 64
Query: 67 TPGALKPDQPVCSVGGRGDAYSKSGGCLPPRSNRDTRGCPAYYRC 111
L+ D C G +SG ++N +RGC RC
Sbjct: 65 GYETLRRDMVPCQKPGASYYDCRSG-----QANSYSRGCDTITRC 104
>sp|Q9LK37|RLF24_ARATH Protein RALF-like 24 OS=Arabidopsis thaliana GN=RALFL24 PE=3 SV=1
Length = 118
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 52 SDISRRFLEERKKYITPGALKPDQPVCSVGGRGDAYSKSGGCLPPRSNRDTRGCPAYYRC 111
S+ISRR + RK+YI+ L+ D C G +SG ++N RGC RC
Sbjct: 55 SEISRRVMMMRKQYISYETLRRDMVPCQKPGASYYACRSG-----QANAYNRGCSVITRC 109
>sp|A7Z8F5|ALLB_BACA2 Allantoinase OS=Bacillus amyloliquefaciens (strain FZB42) GN=allB
PE=3 SV=1
Length = 454
Score = 29.6 bits (65), Expect = 5.5, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 10/63 (15%)
Query: 39 IAECSEEIEMFMESDISRRFLEERKKYITPGAL--------KPDQPVCSVGGRGDAYSKS 90
IA C + + + ESD RFLE +Y G + +P++ C R Y+++
Sbjct: 173 IAACGKVLALHAESDALTRFLE--AEYALQGKIDVRAYASSRPEEAECEAVQRAIEYARA 230
Query: 91 GGC 93
GC
Sbjct: 231 TGC 233
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,677,982
Number of Sequences: 539616
Number of extensions: 1524613
Number of successful extensions: 3200
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3182
Number of HSP's gapped (non-prelim): 17
length of query: 115
length of database: 191,569,459
effective HSP length: 83
effective length of query: 32
effective length of database: 146,781,331
effective search space: 4697002592
effective search space used: 4697002592
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)