Query 033630
Match_columns 115
No_of_seqs 151 out of 220
Neff 4.3
Searched_HMMs 13730
Date Mon Mar 25 06:57:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033630.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/033630hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d3cx5d2 f.23.11.1 (D:261-307) 18.9 30 0.0022 19.4 1.9 15 9-23 8-22 (47)
2 d1mcvi_ g.3.2.1 (I:) Trypsin i 9.1 36 0.0026 17.1 0.2 8 108-115 6-13 (28)
3 d1ppjd2 f.23.11.1 (D:196-241) 8.7 90 0.0066 17.0 1.9 15 9-23 8-22 (46)
4 d1omca_ g.3.6.1 (A:) Conotoxin 5.9 89 0.0065 15.3 0.8 9 97-105 18-26 (27)
5 d1hvwa_ g.3.6.2 (A:) Atracotox 5.1 1.1E+02 0.0083 14.8 0.9 6 100-105 9-14 (26)
6 d1qk7a_ g.3.6.2 (A:) Lectin SH 4.9 1.4E+02 0.01 15.2 1.2 14 100-113 8-21 (32)
7 d1e0fi_ g.3.15.2 (I:) Haemadin 4.8 98 0.0071 17.5 0.6 8 46-53 48-55 (57)
8 g1ii8.1 c.37.1.12 (A:,B:) Rad5 4.7 3.3E+02 0.024 17.1 3.5 49 5-59 276-324 (369)
9 d2dw4a1 a.4.1.18 (A:172-273) L 4.6 1.8E+02 0.013 17.7 1.8 13 62-74 87-99 (102)
10 d1ha9a_ g.3.2.1 (A:) Trypsin i 4.2 90 0.0065 16.2 0.1 7 109-115 13-19 (34)
No 1
>d3cx5d2 f.23.11.1 (D:261-307) Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=18.92 E-value=30 Score=19.41 Aligned_cols=15 Identities=33% Similarity=0.529 Sum_probs=11.6
Q ss_pred hhhhhHHHHHHHHHh
Q 033630 9 SLHLSSCLILALLLF 23 (115)
Q Consensus 9 ~~~~~~~~~~~l~~~ 23 (115)
-|++|.+++++++++
T Consensus 8 ~mg~K~~~i~s~l~~ 22 (47)
T d3cx5d2 8 RLGLKTVIILSSLYL 22 (47)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 388998888877755
No 2
>d1mcvi_ g.3.2.1 (I:) Trypsin inhibitor {Jumping cucumber (Ecballium elaterium) [TaxId: 3679]}
Probab=9.14 E-value=36 Score=17.07 Aligned_cols=8 Identities=50% Similarity=1.207 Sum_probs=5.0
Q ss_pred ccccCCCC
Q 033630 108 YYRCRSGS 115 (115)
Q Consensus 108 itRCrr~s 115 (115)
|-|||+||
T Consensus 6 ym~c~~ds 13 (28)
T d1mcvi_ 6 YMRCKQDS 13 (28)
T ss_dssp CCBCSSGG
T ss_pred hhhccccc
Confidence 45677664
No 3
>d1ppjd2 f.23.11.1 (D:196-241) Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor {Cow (Bos taurus) [TaxId: 9913]}
Probab=8.72 E-value=90 Score=16.99 Aligned_cols=15 Identities=33% Similarity=0.454 Sum_probs=10.3
Q ss_pred hhhhhHHHHHHHHHh
Q 033630 9 SLHLSSCLILALLLF 23 (115)
Q Consensus 9 ~~~~~~~~~~~l~~~ 23 (115)
.|+++.+++|++.+.
T Consensus 8 ~mG~Kv~~~l~~l~~ 22 (46)
T d1ppjd2 8 RMGLKMLLMMGLLLP 22 (46)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 488888777766543
No 4
>d1omca_ g.3.6.1 (A:) Conotoxin {Sea snail (Conus geographus), G IVa [TaxId: 6491]}
Probab=5.90 E-value=89 Score=15.32 Aligned_cols=9 Identities=33% Similarity=0.582 Sum_probs=5.5
Q ss_pred CCCCCCCCC
Q 033630 97 RSNRDTRGC 105 (115)
Q Consensus 97 paNpY~RGC 105 (115)
.-|||+.-|
T Consensus 18 scnpytkrc 26 (27)
T d1omca_ 18 SCNPYTKRC 26 (27)
T ss_dssp CEETTTTEE
T ss_pred ccCcccccc
Confidence 447887544
No 5
>d1hvwa_ g.3.6.2 (A:) Atracotoxin-hvI (versutoxin) {Australian funnel-web spider (Hadronyche versuta) [TaxId: 6904]}
Probab=5.13 E-value=1.1e+02 Score=14.77 Aligned_cols=6 Identities=17% Similarity=0.506 Sum_probs=2.5
Q ss_pred CCCCCC
Q 033630 100 RDTRGC 105 (115)
Q Consensus 100 pY~RGC 105 (115)
||+-.|
T Consensus 9 pynenc 14 (26)
T d1hvwa_ 9 PYNENC 14 (26)
T ss_dssp SSTTSB
T ss_pred CCCccc
Confidence 444333
No 6
>d1qk7a_ g.3.6.2 (A:) Lectin SHL-I {Chinese bird spider (Selenocosmia huwena) [TaxId: 29017]}
Probab=4.86 E-value=1.4e+02 Score=15.15 Aligned_cols=14 Identities=29% Similarity=0.636 Sum_probs=9.2
Q ss_pred CCCCCCCCccccCC
Q 033630 100 RDTRGCPAYYRCRS 113 (115)
Q Consensus 100 pY~RGCs~itRCrr 113 (115)
.|..||-..+-|.+
T Consensus 8 dy~~gccsgyvcs~ 21 (32)
T d1qk7a_ 8 DYNNGCCSGYVCSR 21 (32)
T ss_dssp SSSCCCCTTEEECS
T ss_pred cccCCcccceEecC
Confidence 46667777776654
No 7
>d1e0fi_ g.3.15.2 (I:) Haemadin {Indian leech (Haemadipsa sylvestris) [TaxId: 13555]}
Probab=4.81 E-value=98 Score=17.50 Aligned_cols=8 Identities=13% Similarity=0.281 Sum_probs=4.4
Q ss_pred hhhcccch
Q 033630 46 IEMFMESD 53 (115)
Q Consensus 46 eE~~M~SE 53 (115)
|||+.|.|
T Consensus 48 eefeidee 55 (57)
T d1e0fi_ 48 EEFEIDEE 55 (57)
T ss_dssp CCCCCCCC
T ss_pred ceeecccc
Confidence 55666544
No 8
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=4.75 E-value=3.3e+02 Score=17.05 Aligned_cols=49 Identities=24% Similarity=0.146 Sum_probs=27.0
Q ss_pred cccchhhhhHHHHHHHHHhHHHhhhccCCcccCccccchhhhhhcccchhhhhhh
Q 033630 5 LTNLSLHLSSCLILALLLFNKAATARSSNICNGSIAECSEEIEMFMESDISRRFL 59 (115)
Q Consensus 5 ~~~~~~~~~~~~~~~l~~~~~~~~as~~~~C~Gsi~EC~~eeE~~M~SE~~RR~L 59 (115)
+..||-+.+..+++|+.+........ +.++ -.++|.|-.++.+.-++++
T Consensus 276 ~~~lS~Ge~~~~~la~~l~~~~~~~~-----~~~i-lliDEpe~~Lh~~~~~~l~ 324 (369)
T g1ii8.1 276 LTFLSGGERIALGLAFRLAMSLYLAG-----EISL-LILDEPTPYLDEERRRKLI 324 (369)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHHHHHS-----SCSE-EEEECCSSSSCSHHHHHHH
T ss_pred eeccchHHHHHHHHHHHHHHHHhcCC-----CCCE-EEEECCCCCCCHHHHHHHH
Confidence 45677788877777666543222111 1122 1236667667777666664
No 9
>d2dw4a1 a.4.1.18 (A:172-273) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.56 E-value=1.8e+02 Score=17.68 Aligned_cols=13 Identities=31% Similarity=0.238 Sum_probs=9.7
Q ss_pred cccccCCCCCCCC
Q 033630 62 RKKYITPGALKPD 74 (115)
Q Consensus 62 ~~~yIsYgAL~~d 74 (115)
...||+||..++-
T Consensus 87 ~~G~INfGv~~r~ 99 (102)
T d2dw4a1 87 RHGLINFGIYKRI 99 (102)
T ss_dssp HTTSSSCSSCBCC
T ss_pred HcCceeeCcCcCC
Confidence 3459999988764
No 10
>d1ha9a_ g.3.2.1 (A:) Trypsin inhibitor {Spiny bitter cucumber (Momordica cochinchinensis), MCOTI-II [TaxId: 3674]}
Probab=4.21 E-value=90 Score=16.16 Aligned_cols=7 Identities=43% Similarity=0.899 Sum_probs=3.9
Q ss_pred cccCCCC
Q 033630 109 YRCRSGS 115 (115)
Q Consensus 109 tRCrr~s 115 (115)
..|||||
T Consensus 13 kkcrrds 19 (34)
T d1ha9a_ 13 KKCRRDS 19 (34)
T ss_dssp CBCSSGG
T ss_pred HHhcccc
Confidence 4566654
Done!