BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033635
MHDFCFTIPYGLILIGGGIVGFAKKGSTASLAGGVGTGLLLVLAGYLSLKAFEKKKNSYF
AIVIETVCAAVLTVVMAQRYMETSKVMPAGIVCPHDRVLSVQNCDRWQPYSSQG

High Scoring Gene Products

Symbol, full name Information P value
AT3G20510 protein from Arabidopsis thaliana 1.3e-15
AT1G50740 protein from Arabidopsis thaliana 3.8e-14

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033635
        (114 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2085780 - symbol:AT3G20510 species:3702 "Arabi...   196  1.3e-15   1
TAIR|locus:2033177 - symbol:AT1G50740 "AT1G50740" species...   182  3.8e-14   1


>TAIR|locus:2085780 [details] [associations]
            symbol:AT3G20510 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0016020 "membrane"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] InterPro:IPR005349 Pfam:PF03647
            GO:GO:0016021 GO:GO:0005634 GO:GO:0005737 EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AP000410 HOGENOM:HOG000211932
            PANTHER:PTHR12668 eggNOG:NOG240787 OMA:YISLKAF
            ProtClustDB:CLSN2685039 EMBL:BT010505 EMBL:AK176567 EMBL:AK176851
            IPI:IPI00541215 RefSeq:NP_188687.1 UniGene:At.43873 IntAct:Q9LJU6
            STRING:Q9LJU6 PaxDb:Q9LJU6 PRIDE:Q9LJU6 EnsemblPlants:AT3G20510.1
            GeneID:821597 KEGG:ath:AT3G20510 TAIR:At3g20510 InParanoid:Q9LJU6
            PhylomeDB:Q9LJU6 Genevestigator:Q9LJU6 Uniprot:Q9LJU6
        Length = 119

 Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 41/92 (44%), Positives = 49/92 (53%)

Query:     1 MHDFCFTIPYXXXXXXXXXXXFAKKXXXXXXXXXXXXXXXXXXXXXXXXKAFEKKKNSYF 60
             MHDFCFTIPY           + KK                        KAFEKKKNS  
Sbjct:     1 MHDFCFTIPYGMLLIGGGFIGYMKKGSITSFAGGAGTGLLLILAGYISLKAFEKKKNSTI 60

Query:    61 AIVIETVCAAVLTVVMAQRYMETSKVMPAGIV 92
             A+V++TV AA LT+VM QRY+ T K+MPAG+V
Sbjct:    61 AMVLQTVIAAALTLVMGQRYLLTGKIMPAGLV 92


>TAIR|locus:2033177 [details] [associations]
            symbol:AT1G50740 "AT1G50740" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0006612 "protein targeting to membrane"
            evidence=RCA] [GO:0009963 "positive regulation of flavonoid
            biosynthetic process" evidence=RCA] [GO:0010200 "response to
            chitin" evidence=RCA] [GO:0010363 "regulation of plant-type
            hypersensitive response" evidence=RCA] [GO:0030968 "endoplasmic
            reticulum unfolded protein response" evidence=RCA] [GO:0050832
            "defense response to fungus" evidence=RCA] InterPro:IPR005349
            Pfam:PF03647 GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR
            HOGENOM:HOG000211932 PANTHER:PTHR12668 OMA:WIGFAYA EMBL:AC079027
            EMBL:AY074495 EMBL:AY096728 EMBL:AY087361 IPI:IPI00518839
            PIR:C96544 RefSeq:NP_564579.1 UniGene:At.43937 STRING:Q9C6T7
            EnsemblPlants:AT1G50740.1 GeneID:841496 KEGG:ath:AT1G50740
            TAIR:At1g50740 eggNOG:NOG275159 InParanoid:Q9C6T7 PhylomeDB:Q9C6T7
            ProtClustDB:CLSN2685039 ArrayExpress:Q9C6T7 Genevestigator:Q9C6T7
            Uniprot:Q9C6T7
        Length = 119

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 38/92 (41%), Positives = 46/92 (50%)

Query:     1 MHDFCFTIPYXXXXXXXXXXXFAKKXXXXXXXXXXXXXXXXXXXXXXXXKAFEKKKNSYF 60
             MHDFCFTIPY           + KK                        KAFEKKK S  
Sbjct:     1 MHDFCFTIPYGILLIVGGFIGYLKKGSIASLAGGAGTGLLVVLAGFISLKAFEKKKTSLL 60

Query:    61 AIVIETVCAAVLTVVMAQRYMETSKVMPAGIV 92
             A ++ETV AA LT VM QR+++T K+MPA +V
Sbjct:    61 ATLLETVIAAALTFVMGQRFLQTQKIMPAALV 92


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.134   0.427    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      114        79   0.00091  102 3  11 22  0.46    28
                                                     29  0.39    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  551 (59 KB)
  Total size of DFA:  111 KB (2074 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.92u 0.11s 8.03t   Elapsed:  00:00:00
  Total cpu time:  7.92u 0.11s 8.03t   Elapsed:  00:00:00
  Start:  Tue May 21 00:12:40 2013   End:  Tue May 21 00:12:40 2013

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