Your job contains 1 sequence.
>033637
MAASKDNEEASDAPSSPKKVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEA
FIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKVRLCCLL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 033637
(114 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
DICTYBASE|DDB_G0285221 - symbol:med31 "putative mediator ... 292 8.4e-26 1
POMBASE|SPCP31B10.03c - symbol:med31 "mediator complex su... 277 3.3e-24 1
UNIPROTKB|F1N9T5 - symbol:MED31 "Uncharacterized protein"... 272 1.1e-23 1
ZFIN|ZDB-GENE-040718-114 - symbol:med31 "mediator of RNA ... 272 1.1e-23 1
UNIPROTKB|A0JNN3 - symbol:MED31 "Mediator of RNA polymera... 269 2.3e-23 1
UNIPROTKB|I3LLR7 - symbol:MED31 "Uncharacterized protein"... 269 2.3e-23 1
MGI|MGI:1914529 - symbol:Med31 "mediator of RNA polymeras... 269 2.3e-23 1
RGD|1309457 - symbol:Med31 "mediator complex subunit 31" ... 269 2.3e-23 1
UNIPROTKB|Q9Y3C7 - symbol:MED31 "Mediator of RNA polymera... 267 3.8e-23 1
FB|FBgn0037262 - symbol:MED31 "Mediator complex subunit 3... 266 4.8e-23 1
CGD|CAL0004531 - symbol:SOH1 species:5476 "Candida albica... 250 2.4e-21 1
UNIPROTKB|Q59P87 - symbol:SOH1 "Mediator of RNA polymeras... 250 2.4e-21 1
UNIPROTKB|E2R6K3 - symbol:MED31 "Uncharacterized protein"... 242 1.7e-20 1
WB|WBGene00007026 - symbol:mdt-31 species:6239 "Caenorhab... 233 1.5e-19 1
UNIPROTKB|F6XQ10 - symbol:MED31 "Uncharacterized protein"... 219 4.6e-18 1
SGD|S000003095 - symbol:SOH1 "Subunit of the RNA polymera... 173 3.4e-13 1
ASPGD|ASPL0000051573 - symbol:AN2495 species:162425 "Emer... 99 2.8e-12 2
UNIPROTKB|I3L0P8 - symbol:MED31 "Mediator of RNA polymera... 88 0.00035 1
>DICTYBASE|DDB_G0285221 [details] [associations]
symbol:med31 "putative mediator complex subunit 31"
species:44689 "Dictyostelium discoideum" [GO:0016592 "mediator
complex" evidence=IEA;ISS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0003713
"transcription coactivator activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0001104 "RNA polymerase II transcription cofactor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR008831 Pfam:PF05669 dictyBase:DDB_G0285221
GenomeReviews:CM000153_GR GO:GO:0006357 GO:GO:0003713
EMBL:AAFI02000076 GO:GO:0016592 GO:GO:0001104 eggNOG:COG5088
KO:K15153 PANTHER:PTHR13186 RefSeq:XP_638330.1 STRING:Q54NI7
EnsemblProtists:DDB0266952 GeneID:8625000 KEGG:ddi:DDB_G0285221
OMA:FIMELEF Uniprot:Q54NI7
Length = 176
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 53/101 (52%), Positives = 73/101 (72%)
Query: 6 DNEEASDAPSSPKKV-YKDPDDGRQ--RFLLELEFVQCLANPTYIHYLAQNRYFEDEAFI 62
DN E+ D + Y++ ++ RF++ELEF+QCL+NP Y++YLAQNRYF+D+AF+
Sbjct: 28 DNGESIDKKDDNIVLPYENDEEEANYLRFIMELEFIQCLSNPRYLNYLAQNRYFQDKAFV 87
Query: 63 GYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAH 103
YL YLQYW++PEY KFI+YP LYFL+LLQ FR + H
Sbjct: 88 NYLVYLQYWKKPEYAKFIVYPQSLYFLDLLQEERFRQELNH 128
>POMBASE|SPCP31B10.03c [details] [associations]
symbol:med31 "mediator complex subunit Med31"
species:4896 "Schizosaccharomyces pombe" [GO:0001104 "RNA
polymerase II transcription cofactor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IC] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IPI] [GO:0016592
"mediator complex" evidence=IGI;IDA] InterPro:IPR008831
Pfam:PF05669 PomBase:SPCP31B10.03c GO:GO:0005829 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0016592 GO:GO:0001104
eggNOG:COG5088 HOGENOM:HOG000242147 KO:K15153 PANTHER:PTHR13186
OrthoDB:EOG42Z80W EMBL:AF284581 PIR:T41693 RefSeq:NP_587859.1
IntAct:Q9USH1 STRING:Q9USH1 EnsemblFungi:SPCP31B10.03c.1
GeneID:2539504 KEGG:spo:SPCP31B10.03c OMA:QFRNDIS NextBio:20800666
Uniprot:Q9USH1
Length = 139
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 48/78 (61%), Positives = 65/78 (83%)
Query: 22 KDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIM 81
K PDD + RF +ELEFVQ L+NP Y+++LAQ++YFEDEAF+ YL+Y++YW+ PEY+KFI+
Sbjct: 9 KVPDD-KSRFEIELEFVQMLSNPWYLNFLAQHKYFEDEAFLQYLEYMEYWREPEYVKFII 67
Query: 82 YPHCLYFLELLQNANFRN 99
YP CL+ L LL+N FRN
Sbjct: 68 YPTCLHMLTLLKNPQFRN 85
>UNIPROTKB|F1N9T5 [details] [associations]
symbol:MED31 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001104 "RNA polymerase II transcription cofactor
activity" evidence=IEA] [GO:0016592 "mediator complex"
evidence=IEA] InterPro:IPR008831 Pfam:PF05669 GO:GO:0016592
GO:GO:0001104 GeneTree:ENSGT00390000015531 OMA:HCLHMLE
PANTHER:PTHR13186 EMBL:AADN02025673 IPI:IPI00575467
Ensembl:ENSGALT00000009663 Uniprot:F1N9T5
Length = 130
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 49/83 (59%), Positives = 62/83 (74%)
Query: 23 DPDD--GRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFI 80
D DD R RF LELEFVQCLANP Y+++LAQ YF+D+AF+ YLKYL YW+ PEY K++
Sbjct: 8 DADDTGNRLRFQLELEFVQCLANPNYLNFLAQRGYFKDKAFVNYLKYLLYWKEPEYAKYL 67
Query: 81 MYPHCLYFLELLQNANFRNAMAH 103
YP CL+ LELLQ +FR + +
Sbjct: 68 KYPQCLHMLELLQYEHFRKELVN 90
>ZFIN|ZDB-GENE-040718-114 [details] [associations]
symbol:med31 "mediator of RNA polymerase II
transcription, subunit 31 homolog (yeast)" species:7955 "Danio
rerio" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0001104 "RNA polymerase II transcription cofactor
activity" evidence=IEA] [GO:0016592 "mediator complex"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR008831 Pfam:PF05669 ZFIN:ZDB-GENE-040718-114
GO:GO:0016592 GO:GO:0001104 CTD:51003 eggNOG:COG5088
GeneTree:ENSGT00390000015531 HOGENOM:HOG000242147
HOVERGEN:HBG052449 KO:K15153 OrthoDB:EOG4GF3GK PANTHER:PTHR13186
EMBL:BC076157 IPI:IPI00494571 RefSeq:NP_001002417.2 UniGene:Dr.529
STRING:Q6DH26 Ensembl:ENSDART00000124416 GeneID:436690
KEGG:dre:436690 InParanoid:Q6DH26 NextBio:20831133 Bgee:Q6DH26
Uniprot:Q6DH26
Length = 136
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 47/84 (55%), Positives = 61/84 (72%)
Query: 20 VYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKF 79
V + + RQRF LELEFVQCLANP Y+++LAQ Y ++ F+ YLKYL YW+ PEY KF
Sbjct: 4 VMETDEQARQRFQLELEFVQCLANPNYLNFLAQRGYLREKPFVNYLKYLLYWKEPEYAKF 63
Query: 80 IMYPHCLYFLELLQNANFRNAMAH 103
+ YPHCL+ LELLQ +FR + +
Sbjct: 64 LKYPHCLHMLELLQYEHFRKELVN 87
>UNIPROTKB|A0JNN3 [details] [associations]
symbol:MED31 "Mediator of RNA polymerase II transcription
subunit 31" species:9913 "Bos taurus" [GO:0016592 "mediator
complex" evidence=IEA] [GO:0001104 "RNA polymerase II transcription
cofactor activity" evidence=IEA] InterPro:IPR008831 Pfam:PF05669
GO:GO:0016592 GO:GO:0001104 EMBL:BC126806 IPI:IPI00690333
RefSeq:NP_001071457.1 UniGene:Bt.88324 STRING:A0JNN3
Ensembl:ENSBTAT00000029148 GeneID:532868 KEGG:bta:532868 CTD:51003
eggNOG:COG5088 GeneTree:ENSGT00390000015531 HOGENOM:HOG000242147
HOVERGEN:HBG052449 InParanoid:A0JNN3 KO:K15153 OMA:HCLHMLE
OrthoDB:EOG4GF3GK NextBio:20875831 PANTHER:PTHR13186 Uniprot:A0JNN3
Length = 131
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 49/86 (56%), Positives = 63/86 (73%)
Query: 20 VYKDPDDG--RQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYI 77
V + DD R RF LELEFVQCLANP Y+++LAQ YF+D+AF+ YLKYL YW+ PEY
Sbjct: 5 VAMETDDAGNRLRFQLELEFVQCLANPNYLNFLAQRGYFKDKAFVNYLKYLLYWKEPEYA 64
Query: 78 KFIMYPHCLYFLELLQNANFRNAMAH 103
K++ YP CL+ LELLQ +FR + +
Sbjct: 65 KYLKYPQCLHMLELLQYEHFRKELVN 90
>UNIPROTKB|I3LLR7 [details] [associations]
symbol:MED31 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016592 "mediator complex" evidence=IEA] [GO:0001104
"RNA polymerase II transcription cofactor activity" evidence=IEA]
InterPro:IPR008831 Pfam:PF05669 GO:GO:0016592 GO:GO:0001104
GeneTree:ENSGT00390000015531 KO:K15153 OMA:HCLHMLE
PANTHER:PTHR13186 EMBL:CU571053 RefSeq:XP_003358264.1
Ensembl:ENSSSCT00000024304 GeneID:100622626 KEGG:ssc:100622626
Uniprot:I3LLR7
Length = 131
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 49/86 (56%), Positives = 63/86 (73%)
Query: 20 VYKDPDDG--RQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYI 77
V + DD R RF LELEFVQCLANP Y+++LAQ YF+D+AF+ YLKYL YW+ PEY
Sbjct: 5 VAMETDDAGNRLRFQLELEFVQCLANPNYLNFLAQRGYFKDKAFVNYLKYLLYWKEPEYA 64
Query: 78 KFIMYPHCLYFLELLQNANFRNAMAH 103
K++ YP CL+ LELLQ +FR + +
Sbjct: 65 KYLKYPQCLHMLELLQYEHFRKELVN 90
>MGI|MGI:1914529 [details] [associations]
symbol:Med31 "mediator of RNA polymerase II transcription,
subunit 31 homolog (yeast)" species:10090 "Mus musculus"
[GO:0001104 "RNA polymerase II transcription cofactor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=ISO] [GO:0016592 "mediator complex"
evidence=IDA] [GO:0032403 "protein complex binding" evidence=ISO]
InterPro:IPR008831 Pfam:PF05669 MGI:MGI:1914529 GO:GO:0005654
GO:GO:0006461 Reactome:REACT_127416 Reactome:REACT_27166
GO:GO:0016592 GO:GO:0001104 EMBL:BX119911 CTD:51003 eggNOG:COG5088
GeneTree:ENSGT00390000015531 HOGENOM:HOG000242147
HOVERGEN:HBG052449 KO:K15153 OMA:HCLHMLE OrthoDB:EOG4GF3GK
PANTHER:PTHR13186 EMBL:AK005655 EMBL:AK013990 EMBL:BC019685
EMBL:BC051929 IPI:IPI00321251 RefSeq:NP_080344.2 UniGene:Mm.159496
ProteinModelPortal:Q9CXU1 SMR:Q9CXU1 IntAct:Q9CXU1 MINT:MINT-219187
STRING:Q9CXU1 PhosphoSite:Q9CXU1 PaxDb:Q9CXU1 PRIDE:Q9CXU1
DNASU:67279 Ensembl:ENSMUST00000021157 GeneID:67279 KEGG:mmu:67279
UCSC:uc007jyk.1 InParanoid:Q9CXU1 NextBio:324090 Bgee:Q9CXU1
Genevestigator:Q9CXU1 GermOnline:ENSMUSG00000020801 Uniprot:Q9CXU1
Length = 131
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 49/86 (56%), Positives = 63/86 (73%)
Query: 20 VYKDPDDG--RQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYI 77
V + DD R RF LELEFVQCLANP Y+++LAQ YF+D+AF+ YLKYL YW+ PEY
Sbjct: 5 VAMETDDAGNRLRFQLELEFVQCLANPNYLNFLAQRGYFKDKAFVNYLKYLLYWKEPEYA 64
Query: 78 KFIMYPHCLYFLELLQNANFRNAMAH 103
K++ YP CL+ LELLQ +FR + +
Sbjct: 65 KYLKYPQCLHMLELLQYEHFRKELVN 90
>RGD|1309457 [details] [associations]
symbol:Med31 "mediator complex subunit 31" species:10116 "Rattus
norvegicus" [GO:0001104 "RNA polymerase II transcription cofactor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006461 "protein complex assembly" evidence=IDA] [GO:0016592
"mediator complex" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IDA] InterPro:IPR008831 Pfam:PF05669 RGD:1309457
GO:GO:0005634 GO:GO:0006461 GO:GO:0032403 EMBL:CH473948
GO:GO:0016592 GO:GO:0001104 CTD:51003 GeneTree:ENSGT00390000015531
KO:K15153 OMA:HCLHMLE OrthoDB:EOG4GF3GK PANTHER:PTHR13186
IPI:IPI00369701 RefSeq:NP_001129285.1 UniGene:Rn.20884
Ensembl:ENSRNOT00000019919 GeneID:287475 KEGG:rno:287475
NextBio:626276 Uniprot:D4A7J4
Length = 131
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 49/86 (56%), Positives = 63/86 (73%)
Query: 20 VYKDPDDG--RQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYI 77
V + DD R RF LELEFVQCLANP Y+++LAQ YF+D+AF+ YLKYL YW+ PEY
Sbjct: 5 VAMETDDAGNRLRFQLELEFVQCLANPNYLNFLAQRGYFKDKAFVNYLKYLLYWKEPEYA 64
Query: 78 KFIMYPHCLYFLELLQNANFRNAMAH 103
K++ YP CL+ LELLQ +FR + +
Sbjct: 65 KYLKYPQCLHMLELLQYEHFRKELVN 90
>UNIPROTKB|Q9Y3C7 [details] [associations]
symbol:MED31 "Mediator of RNA polymerase II transcription
subunit 31" species:9606 "Homo sapiens" [GO:0001104 "RNA polymerase
II transcription cofactor activity" evidence=IEA] [GO:0016592
"mediator complex" evidence=IEA] [GO:0006461 "protein complex
assembly" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_71
InterPro:IPR008831 Pfam:PF05669 Reactome:REACT_111045 EMBL:CH471108
GO:GO:0005654 GO:GO:0006461 GO:GO:0006367 GO:GO:0016592
GO:GO:0001104 CTD:51003 eggNOG:COG5088 HOGENOM:HOG000242147
HOVERGEN:HBG052449 KO:K15153 OMA:HCLHMLE OrthoDB:EOG4GF3GK
PANTHER:PTHR13186 EMBL:AF151883 EMBL:AK311875 EMBL:BC012539
IPI:IPI00007021 RefSeq:NP_057144.1 UniGene:Hs.567493
ProteinModelPortal:Q9Y3C7 SMR:Q9Y3C7 IntAct:Q9Y3C7
MINT:MINT-1418286 STRING:Q9Y3C7 PhosphoSite:Q9Y3C7 DMDM:38258656
PaxDb:Q9Y3C7 PRIDE:Q9Y3C7 DNASU:51003 Ensembl:ENST00000225728
GeneID:51003 KEGG:hsa:51003 UCSC:uc002gdg.4 GeneCards:GC17M006546
HGNC:HGNC:24260 HPA:HPA035947 neXtProt:NX_Q9Y3C7
PharmGKB:PA134884310 InParanoid:Q9Y3C7 PhylomeDB:Q9Y3C7
GenomeRNAi:51003 NextBio:53464 Bgee:Q9Y3C7 CleanEx:HS_MED31
Genevestigator:Q9Y3C7 GermOnline:ENSG00000108590 Uniprot:Q9Y3C7
Length = 131
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 49/86 (56%), Positives = 63/86 (73%)
Query: 20 VYKDPDDG--RQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYI 77
V + DD R RF LELEFVQCLANP Y+++LAQ YF+D+AF+ YLKYL YW+ PEY
Sbjct: 5 VAMETDDAGNRLRFQLELEFVQCLANPNYLNFLAQRGYFKDKAFVNYLKYLLYWKDPEYA 64
Query: 78 KFIMYPHCLYFLELLQNANFRNAMAH 103
K++ YP CL+ LELLQ +FR + +
Sbjct: 65 KYLKYPQCLHMLELLQYEHFRKELVN 90
>FB|FBgn0037262 [details] [associations]
symbol:MED31 "Mediator complex subunit 31" species:7227
"Drosophila melanogaster" [GO:0001104 "RNA polymerase II
transcription cofactor activity" evidence=IEA;ISS] [GO:0016592
"mediator complex" evidence=ISS;IDA] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISS;IDA]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0008595 "anterior/posterior axis specification, embryo"
evidence=IMP] InterPro:IPR008831 Pfam:PF05669 EMBL:AE014297
GO:GO:0008595 GO:GO:0006367 GO:GO:0016592 GO:GO:0001104 CTD:51003
eggNOG:COG5088 GeneTree:ENSGT00390000015531 KO:K15153
PANTHER:PTHR13186 EMBL:AY061423 EMBL:BT001465 RefSeq:NP_001246908.1
RefSeq:NP_649483.1 RefSeq:NP_730861.1 UniGene:Dm.1060
ProteinModelPortal:Q8IH24 SMR:Q8IH24 IntAct:Q8IH24 MINT:MINT-807354
STRING:Q8IH24 EnsemblMetazoa:FBtr0078856 EnsemblMetazoa:FBtr0078857
EnsemblMetazoa:FBtr0305312 GeneID:40577 KEGG:dme:Dmel_CG1057
FlyBase:FBgn0037262 HOGENOM:HOG000263843 InParanoid:Q8IH24
OMA:NQCCKFI OrthoDB:EOG412JNS PhylomeDB:Q8IH24 ChiTaRS:MED31
GenomeRNAi:40577 NextBio:819475 Bgee:Q8IH24 GermOnline:CG1057
Uniprot:Q8IH24
Length = 204
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 43/76 (56%), Positives = 63/76 (82%)
Query: 28 RQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLY 87
++R+ +ELEFVQCL+NP Y+++LAQ +F+D++FI YLKYLQYW+ P+Y K++MYP CLY
Sbjct: 19 KRRWQIELEFVQCLSNPNYLNFLAQRGFFKDQSFINYLKYLQYWKEPDYAKYLMYPMCLY 78
Query: 88 FLELLQNANFRNAMAH 103
FL+LLQ +FR + +
Sbjct: 79 FLDLLQYEHFRREIVN 94
>CGD|CAL0004531 [details] [associations]
symbol:SOH1 species:5476 "Candida albicans" [GO:0070847 "core
mediator complex" evidence=IEA] [GO:0016592 "mediator complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006311
"meiotic gene conversion" evidence=IEA] [GO:0045144 "meiotic sister
chromatid segregation" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:1900233 "positive regulation of
single-species biofilm formation on inanimate substrate"
evidence=IMP] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] [GO:0000920 "cytokinetic cell
separation" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0070783 "growth of unicellular
organism as a thread of attached cells" evidence=IMP] [GO:0070785
"negative regulation of growth of unicellular organism as a thread
of attached cells" evidence=IGI] InterPro:IPR008831 Pfam:PF05669
CGD:CAL0004531 GO:GO:0009405 GO:GO:0000920 GO:GO:0044011
GO:GO:1900233 GO:GO:0016592 GO:GO:0001104 GO:GO:0070783
EMBL:AACQ01000194 EMBL:AACQ01000193 eggNOG:COG5088 KO:K15153
PANTHER:PTHR13186 RefSeq:XP_711535.1 RefSeq:XP_711556.1
STRING:Q59P87 GeneID:3646859 GeneID:3646880 KEGG:cal:CaO19.1429
KEGG:cal:CaO19.9005 GO:GO:0070785 Uniprot:Q59P87
Length = 146
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 44/69 (63%), Positives = 56/69 (81%)
Query: 30 RFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFL 89
R+ +ELEFVQ L+N Y++YLAQN YF DE FI YL YLQYW +PEY KF++YP+CL+ L
Sbjct: 30 RWEIELEFVQSLSNIPYVNYLAQNNYFNDENFINYLNYLQYWTQPEYSKFLVYPNCLHIL 89
Query: 90 ELLQNANFR 98
+LLQ+ NFR
Sbjct: 90 KLLQDENFR 98
>UNIPROTKB|Q59P87 [details] [associations]
symbol:SOH1 "Mediator of RNA polymerase II transcription
subunit 31" species:237561 "Candida albicans SC5314" [GO:0000920
"cytokinetic cell separation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0044011 "single-species biofilm
formation on inanimate substrate" evidence=IMP] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0070783 "growth of unicellular organism as a
thread of attached cells" evidence=IMP] [GO:0070785 "negative
regulation of growth of unicellular organism as a thread of
attached cells" evidence=IGI] [GO:1900233 "positive regulation of
single-species biofilm formation on inanimate substrate"
evidence=IMP] InterPro:IPR008831 Pfam:PF05669 CGD:CAL0004531
GO:GO:0009405 GO:GO:0000920 GO:GO:0044011 GO:GO:1900233
GO:GO:0016592 GO:GO:0001104 GO:GO:0070783 EMBL:AACQ01000194
EMBL:AACQ01000193 eggNOG:COG5088 KO:K15153 PANTHER:PTHR13186
RefSeq:XP_711535.1 RefSeq:XP_711556.1 STRING:Q59P87 GeneID:3646859
GeneID:3646880 KEGG:cal:CaO19.1429 KEGG:cal:CaO19.9005
GO:GO:0070785 Uniprot:Q59P87
Length = 146
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 44/69 (63%), Positives = 56/69 (81%)
Query: 30 RFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFL 89
R+ +ELEFVQ L+N Y++YLAQN YF DE FI YL YLQYW +PEY KF++YP+CL+ L
Sbjct: 30 RWEIELEFVQSLSNIPYVNYLAQNNYFNDENFINYLNYLQYWTQPEYSKFLVYPNCLHIL 89
Query: 90 ELLQNANFR 98
+LLQ+ NFR
Sbjct: 90 KLLQDENFR 98
>UNIPROTKB|E2R6K3 [details] [associations]
symbol:MED31 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016592 "mediator complex" evidence=IEA]
[GO:0001104 "RNA polymerase II transcription cofactor activity"
evidence=IEA] InterPro:IPR008831 Pfam:PF05669 GO:GO:0016592
GO:GO:0001104 PANTHER:PTHR13186 Ensembl:ENSCAFT00000036026
Uniprot:E2R6K3
Length = 134
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 44/75 (58%), Positives = 55/75 (73%)
Query: 20 VYKDPDDG--RQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYI 77
V + DD R RF LELEFVQCLANP Y+++LAQ YF+D+AF+ YLKYL YW+ PEY
Sbjct: 5 VAMETDDAGNRLRFQLELEFVQCLANPNYLNFLAQRGYFKDKAFVNYLKYLLYWKEPEYA 64
Query: 78 KFIMYPHCLYFLELL 92
K++ Y HCL+ LL
Sbjct: 65 KYLKYDHCLFKFHLL 79
>WB|WBGene00007026 [details] [associations]
symbol:mdt-31 species:6239 "Caenorhabditis elegans"
[GO:0001104 "RNA polymerase II transcription cofactor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016592 "mediator complex"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] InterPro:IPR008831 Pfam:PF05669 GO:GO:0009792
GO:GO:0000003 GO:GO:0016592 GO:GO:0001104 PANTHER:PTHR13186
EMBL:Z81523 GeneID:185213 KEGG:cel:CELE_F32H2.2 CTD:185213
RefSeq:NP_001250947.1 ProteinModelPortal:I2HAC0 SMR:I2HAC0
WormBase:F32H2.2b Uniprot:I2HAC0
Length = 178
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 41/81 (50%), Positives = 60/81 (74%)
Query: 28 RQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLY 87
+ RF +E EFVQ LANP Y+++LAQ YF++E F+ YLKYL YW+ P+Y + + +P CL+
Sbjct: 23 KTRFEVECEFVQALANPNYLNFLAQRGYFKEEYFVNYLKYLLYWKDPQYARCLKFPQCLH 82
Query: 88 FLELLQNANFRNAMAH-PANK 107
LE LQ+ FR++MA+ P+ K
Sbjct: 83 MLEALQSQQFRDSMAYGPSAK 103
>UNIPROTKB|F6XQ10 [details] [associations]
symbol:MED31 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016592 "mediator complex" evidence=IEA]
[GO:0001104 "RNA polymerase II transcription cofactor activity"
evidence=IEA] InterPro:IPR008831 Pfam:PF05669 GO:GO:0016592
GO:GO:0001104 GeneTree:ENSGT00390000015531 OMA:HCLHMLE
PANTHER:PTHR13186 Ensembl:ENSCAFT00000036026 EMBL:AAEX03003562
Uniprot:F6XQ10
Length = 130
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 41/70 (58%), Positives = 52/70 (74%)
Query: 20 VYKDPDDG--RQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYI 77
V + DD R RF LELEFVQCLANP Y+++LAQ YF+D+AF+ YLKYL YW+ PEY
Sbjct: 5 VAMETDDAGNRLRFQLELEFVQCLANPNYLNFLAQRGYFKDKAFVNYLKYLLYWKEPEYA 64
Query: 78 KFIMYPHCLY 87
K++ Y CL+
Sbjct: 65 KYLNY-QCLH 73
>SGD|S000003095 [details] [associations]
symbol:SOH1 "Subunit of the RNA polymerase II mediator
complex" species:4932 "Saccharomyces cerevisiae" [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0001104 "RNA polymerase
II transcription cofactor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0070847 "core mediator complex" evidence=IDA] [GO:0016592
"mediator complex" evidence=IEA] [GO:0045144 "meiotic sister
chromatid segregation" evidence=IMP] [GO:0006281 "DNA repair"
evidence=IPI] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006311 "meiotic gene conversion" evidence=IMP]
InterPro:IPR008831 Pfam:PF05669 SGD:S000003095 EMBL:BK006941
GO:GO:0006281 GO:GO:0006366 GO:GO:0045144 GO:GO:0016592
GO:GO:0001104 EMBL:X87252 GO:GO:0006311 GO:GO:0070847
eggNOG:COG5088 GeneTree:ENSGT00390000015531 HOGENOM:HOG000242147
KO:K15153 PANTHER:PTHR13186 OrthoDB:EOG42Z80W EMBL:L31921
EMBL:Z72649 EMBL:AY693006 PIR:S47895 RefSeq:NP_011388.1 PDB:3FBI
PDB:3FBN PDBsum:3FBI PDBsum:3FBN ProteinModelPortal:P38633
SMR:P38633 DIP:DIP-1179N IntAct:P38633 MINT:MINT-394029
STRING:P38633 PaxDb:P38633 EnsemblFungi:YGL127C GeneID:852750
KEGG:sce:YGL127C CYGD:YGL127c OMA:NEMVERW EvolutionaryTrace:P38633
NextBio:972180 Genevestigator:P38633 GermOnline:YGL127C
Uniprot:P38633
Length = 127
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 38/93 (40%), Positives = 57/93 (61%)
Query: 12 DAPSSPKKVYKDPDDGRQRFLLELEFVQCLANPTYIHYL-AQNRYFEDEAFIGYLKYLQY 70
+AP++P D + RF +ELEF+Q LAN Y+ YL Q + ++ F YLKYL+Y
Sbjct: 7 NAPATPSS---DQNPLPTRFEVELEFIQSLANIQYVTYLLTQQQIWKSPNFKNYLKYLEY 63
Query: 71 WQRPEYIKFIMYPHCLYFLELLQNANFRNAMAH 103
W P Y + I+YP+CL+ L+LL N +A+ +
Sbjct: 64 WCNPPYSQCIVYPNCLFILKLL-NGFMESAIVN 95
>ASPGD|ASPL0000051573 [details] [associations]
symbol:AN2495 species:162425 "Emericella nidulans"
[GO:0001104 "RNA polymerase II transcription cofactor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016592 "mediator complex" evidence=IEA]
InterPro:IPR008831 Pfam:PF05669 EMBL:BN001307 EMBL:AACD01000042
GO:GO:0016592 GO:GO:0001104 HOGENOM:HOG000242147 KO:K15153
PANTHER:PTHR13186 RefSeq:XP_660099.1 EnsemblFungi:CADANIAT00009218
GeneID:2875610 KEGG:ani:AN2495.2 eggNOG:NOG253928 OMA:RDIIRPQ
OrthoDB:EOG42Z80W Uniprot:Q5BAD5
Length = 158
Score = 99 (39.9 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 22/48 (45%), Positives = 27/48 (56%)
Query: 59 EAFIGYLKYL-QYWQRPEYIKFIMYPHC-LYFLELLQNANFRNAMAHP 104
EAF YL YL YW+ PEY +F+ +P L L LLQ FR + P
Sbjct: 69 EAFAAYLAYLYSYWKTPEYSQFLTHPGATLRALRLLQEEKFRRDIIRP 116
Score = 78 (32.5 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 16/24 (66%), Positives = 18/24 (75%)
Query: 30 RFLLELEFVQCLANPTYIHYLAQN 53
RF LELEFV LANP Y+ +LA N
Sbjct: 20 RFTLELEFVSSLANPYYLSHLAVN 43
>UNIPROTKB|I3L0P8 [details] [associations]
symbol:MED31 "Mediator of RNA polymerase II transcription
subunit 31" species:9606 "Homo sapiens" [GO:0001104 "RNA polymerase
II transcription cofactor activity" evidence=IEA] [GO:0016592
"mediator complex" evidence=IEA] InterPro:IPR008831 Pfam:PF05669
GO:GO:0016592 GO:GO:0001104 EMBL:AC004706 PANTHER:PTHR13186
HGNC:HGNC:24260 ProteinModelPortal:I3L0P8 SMR:I3L0P8
Ensembl:ENST00000575197 Bgee:I3L0P8 Uniprot:I3L0P8
Length = 43
Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
Identities = 19/31 (61%), Positives = 22/31 (70%)
Query: 20 VYKDPDDG--RQRFLLELEFVQCLANPTYIH 48
V + DD R RF LELEFVQCLANP Y++
Sbjct: 5 VAMETDDAGNRLRFQLELEFVQCLANPNYLN 35
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.139 0.441 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 114 114 0.00091 102 3 11 22 0.42 30
29 0.44 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 575 (61 KB)
Total size of DFA: 137 KB (2085 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:04
No. of threads or processors used: 24
Search cpu time: 12.78u 0.07s 12.85t Elapsed: 00:00:11
Total cpu time: 12.78u 0.07s 12.85t Elapsed: 00:00:15
Start: Thu May 9 22:01:13 2013 End: Thu May 9 22:01:28 2013