Query 033637
Match_columns 114
No_of_seqs 100 out of 160
Neff 3.1
Searched_HMMs 13730
Date Mon Mar 25 07:05:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033637.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/033637hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1yira2 d.41.2.2 (A:4-144) Nic 69.8 2.9 0.00021 28.3 4.4 36 31-67 55-91 (141)
2 d1vlpa1 d.41.2.2 (A:1-149) Nic 50.4 8.9 0.00064 26.0 4.0 40 31-70 53-93 (149)
3 d2f7fa2 d.41.2.1 (A:4-140) Put 48.3 13 0.00093 24.5 4.5 43 31-77 53-96 (137)
4 d1cmca_ a.43.1.5 (A:) Met repr 36.0 8.7 0.00063 25.6 2.0 36 77-112 21-59 (104)
5 d1tuka1 a.52.1.1 (A:1-67) Non- 29.1 12 0.00085 23.0 1.6 22 69-90 37-58 (67)
6 d1ujka_ a.118.9.2 (A:) ADP-rib 20.6 32 0.0024 22.4 2.7 29 84-112 64-95 (145)
7 d1ybea2 d.41.2.2 (A:8-167) Nic 20.1 32 0.0023 23.3 2.7 37 30-66 68-110 (160)
8 d2a2ma1 a.132.1.3 (A:10-240) H 19.6 27 0.002 24.0 2.2 24 42-66 45-68 (231)
9 d1to9a_ a.132.1.3 (A:) Transcr 19.0 60 0.0043 21.2 3.9 26 40-66 16-41 (225)
10 d2gm8a1 a.132.1.3 (A:2-212) Te 17.9 31 0.0022 22.4 2.1 15 52-66 26-40 (211)
No 1
>d1yira2 d.41.2.2 (A:4-144) Nicotinate phosphoribosyltransferase, N-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=69.81 E-value=2.9 Score=28.30 Aligned_cols=36 Identities=22% Similarity=0.443 Sum_probs=26.8
Q ss_pred hHHHHHHHHhhc-ChHHHHHHHHcccCCCHHHHHHHHH
Q 033637 31 FLLELEFVQCLA-NPTYIHYLAQNRYFEDEAFIGYLKY 67 (114)
Q Consensus 31 Fe~ELEFVQ~LA-NP~YL~~LA~~gy~~d~~FinYLkY 67 (114)
.+..+++++.|. .+.=+.||++.++| +++|++||+=
T Consensus 55 l~~~i~~l~~lrFt~eei~yL~~~~~f-~~~fldyL~~ 91 (141)
T d1yira2 55 IREQLEYLAGLAISDEQLAFLERIPFL-APDFIRFLGL 91 (141)
T ss_dssp HHHHHHHHHHCCCCHHHHHHHHTSTTS-CHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHcCCCC-CHHHHHHHHh
Confidence 566788888876 66778888888888 5667777663
No 2
>d1vlpa1 d.41.2.2 (A:1-149) Nicotinate phosphoribosyltransferase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=50.36 E-value=8.9 Score=25.98 Aligned_cols=40 Identities=23% Similarity=0.393 Sum_probs=29.0
Q ss_pred hHHHHHHHHhhc-ChHHHHHHHHcccCCCHHHHHHHHHHhh
Q 033637 31 FLLELEFVQCLA-NPTYIHYLAQNRYFEDEAFIGYLKYLQY 70 (114)
Q Consensus 31 Fe~ELEFVQ~LA-NP~YL~~LA~~gy~~d~~FinYLkYL~Y 70 (114)
.+..+++++.|. .+.=+.||++++-+=+++|++||+-.++
T Consensus 53 l~~~i~~l~~lrFt~eel~yL~~~~~~~~~~fl~~L~~~rF 93 (149)
T d1vlpa1 53 LKEQFSYLGNLRFTEEEIEYLKQEIPYLPSAYIKYISSSNY 93 (149)
T ss_dssp HHHHHHHGGGCCCCHHHHHHHHHHCTTSCHHHHHHHHSTTC
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHcCCCCCHHHHHHHHhCCc
Confidence 456677777775 6777899987765667778888776554
No 3
>d2f7fa2 d.41.2.1 (A:4-140) Putative nicotinate phosphoribosyltransferase EF2626 {Enterococcus faecalis [TaxId: 1351]}
Probab=48.25 E-value=13 Score=24.46 Aligned_cols=43 Identities=19% Similarity=0.340 Sum_probs=29.1
Q ss_pred hHHHHHHHHhh-cChHHHHHHHHcccCCCHHHHHHHHHHhhhcCCCcc
Q 033637 31 FLLELEFVQCL-ANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYI 77 (114)
Q Consensus 31 Fe~ELEFVQ~L-ANP~YL~~LA~~gy~~d~~FinYLkYL~YWk~PeYa 77 (114)
-+..++++..| -...=+.||++.+++++ .| ++||.-++-+.-.
T Consensus 53 L~~~l~~l~~l~ft~eei~yL~~~~~~~~-~f---l~~L~~~~~~~~i 96 (137)
T d2f7fa2 53 LERLVNYLENLTFTESDIAYLREVEEYPE-DF---LTYLANFEFKCTV 96 (137)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHTSCCCH-HH---HHHHHTCCCCCEE
T ss_pred HHHHHHHHHhCCCCHHHHHHHHhCCCCCH-HH---HHHHHhCCCCceE
Confidence 46677888877 56778888988898864 45 4555555555443
No 4
>d1cmca_ a.43.1.5 (A:) Met repressor, MetJ (MetR) {Escherichia coli [TaxId: 562]}
Probab=35.99 E-value=8.7 Score=25.55 Aligned_cols=36 Identities=25% Similarity=0.327 Sum_probs=27.1
Q ss_pred cccccChhHHHHHHhhCChHHHHHhcC---chHHHhhhh
Q 033637 77 IKFIMYPHCLYFLELLQNANFRNAMAH---PANKVRLCC 112 (114)
Q Consensus 77 ak~l~YP~cL~~L~LLq~~~FR~~i~~---p~~~~~l~~ 112 (114)
+|=|+----+.+|+.|.++.-|+.+.| ..+.+.||.
T Consensus 21 VKKiTVsIP~kVLkiLTdERTRRQvnnlRHATNSELLCE 59 (104)
T d1cmca_ 21 VKKITVSIPLKVLKILTDERTRRQVNNLRHATNSELLCE 59 (104)
T ss_dssp EEEEEEEEEHHHHHHHHHHHHHHHHTTBSCCSHHHHHHH
T ss_pred hheeeEeeeHHHHHHHhhHHHHHHHhhhhhcccHHHHHH
Confidence 444554456899999999999999876 456777774
No 5
>d1tuka1 a.52.1.1 (A:1-67) Non-specific lipid-transfer protein homologue (ns-LTP2) {Triticum turgidum [TaxId: 4571]}
Probab=29.11 E-value=12 Score=23.04 Aligned_cols=22 Identities=36% Similarity=0.557 Sum_probs=17.1
Q ss_pred hhhcCCCccccccChhHHHHHH
Q 033637 69 QYWQRPEYIKFIMYPHCLYFLE 90 (114)
Q Consensus 69 ~YWk~PeYak~l~YP~cL~~L~ 90 (114)
+|-|+|.|.+||.=|++=+++.
T Consensus 37 ~Y~kdP~~~~yv~spnarkv~~ 58 (67)
T d1tuka1 37 QYAKDPTYGQYIRSPHARDTLT 58 (67)
T ss_dssp HHTTCTTTHHHHTSHHHHHHHH
T ss_pred eecCCccHHHHcCCHHHHHHHH
Confidence 6788888888888887766654
No 6
>d1ujka_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.58 E-value=32 Score=22.42 Aligned_cols=29 Identities=17% Similarity=0.122 Sum_probs=22.9
Q ss_pred hHHHHHHhh--C-ChHHHHHhcCchHHHhhhh
Q 033637 84 HCLYFLELL--Q-NANFRNAMAHPANKVRLCC 112 (114)
Q Consensus 84 ~cL~~L~LL--q-~~~FR~~i~~p~~~~~l~~ 112 (114)
.+|.+||.| + .+.|+..|++.++...|..
T Consensus 64 ~aL~LLe~~vkNCG~~f~~evas~~Fl~~L~k 95 (145)
T d1ujka_ 64 QALTVLETCMKSCGKRFHDEVGKFRFLNELIK 95 (145)
T ss_dssp HHHHHHHHHHTSCCHHHHHHHTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHH
Confidence 367777777 3 2999999999999887754
No 7
>d1ybea2 d.41.2.2 (A:8-167) Nicotinate phosphoribosyltransferase, N-terminal domain {Agrobacterium tumefaciens [TaxId: 358]}
Probab=20.14 E-value=32 Score=23.32 Aligned_cols=37 Identities=19% Similarity=0.351 Sum_probs=21.8
Q ss_pred hhHHHHHHHHhhc-ChHHHHHHHHccc-----CCCHHHHHHHH
Q 033637 30 RFLLELEFVQCLA-NPTYIHYLAQNRY-----FEDEAFIGYLK 66 (114)
Q Consensus 30 RFe~ELEFVQ~LA-NP~YL~~LA~~gy-----~~d~~FinYLk 66 (114)
..+.+++++..|. .+.=+.||++... +-+++|++||+
T Consensus 68 gL~~~i~~l~~lrFt~eei~yL~~~~~~~~~~~f~~~fl~~L~ 110 (160)
T d1ybea2 68 ELREQLDHARTLRLSKKENIWLAGNTFYGRSQIFEPEFLSWLS 110 (160)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHSCSSSCSCCSCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHhcCCccccCcCCHHHHHHHh
Confidence 3455666666554 3556788887632 33566666555
No 8
>d2a2ma1 a.132.1.3 (A:10-240) Hypothetical protein BT3146 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=19.58 E-value=27 Score=24.03 Aligned_cols=24 Identities=13% Similarity=0.230 Sum_probs=17.5
Q ss_pred cChHHHHHHHHcccCCCHHHHHHHH
Q 033637 42 ANPTYIHYLAQNRYFEDEAFIGYLK 66 (114)
Q Consensus 42 ANP~YL~~LA~~gy~~d~~FinYLk 66 (114)
-|=.+|+-|+ +|-+..+.|..||.
T Consensus 45 ~~h~Fv~~l~-~GtL~~e~F~~YL~ 68 (231)
T d2a2ma1 45 LQTDYFKGIA-AGTLDPNAYGSLMV 68 (231)
T ss_dssp HTSHHHHHHH-HTCCCHHHHHHHHH
T ss_pred HCCHHHHHHH-cCCCCHHHHHHHHH
Confidence 3444555554 79999999999984
No 9
>d1to9a_ a.132.1.3 (A:) Transcriptional activator TenA {Bacillus subtilis [TaxId: 1423]}
Probab=19.01 E-value=60 Score=21.22 Aligned_cols=26 Identities=8% Similarity=0.087 Sum_probs=18.3
Q ss_pred hhcChHHHHHHHHcccCCCHHHHHHHH
Q 033637 40 CLANPTYIHYLAQNRYFEDEAFIGYLK 66 (114)
Q Consensus 40 ~LANP~YL~~LA~~gy~~d~~FinYLk 66 (114)
...|=.+++-|+ +|-+..+.|..||.
T Consensus 16 ~~~~HPFv~~l~-~GtL~~~~f~~yl~ 41 (225)
T d1to9a_ 16 GSFVHPFVQGIG-DGTLPIDRFKYYVL 41 (225)
T ss_dssp HHHTCHHHHHHH-TTCSCHHHHHHHHH
T ss_pred HHHCCHHHHHHh-cCCCCHHHHHHHHH
Confidence 334445666666 58899999998874
No 10
>d2gm8a1 a.132.1.3 (A:2-212) TenA homolog PAE0170 {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=17.93 E-value=31 Score=22.39 Aligned_cols=15 Identities=27% Similarity=0.166 Sum_probs=12.8
Q ss_pred HcccCCCHHHHHHHH
Q 033637 52 QNRYFEDEAFIGYLK 66 (114)
Q Consensus 52 ~~gy~~d~~FinYLk 66 (114)
.+|-+..+.|..||.
T Consensus 26 ~~GtL~~~~f~~yl~ 40 (211)
T d2gm8a1 26 YAGTLPMEKFKYYLL 40 (211)
T ss_dssp HHTCSCHHHHHHHHH
T ss_pred HcCCCCHHHHHHHHH
Confidence 479999999998875
Done!