BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033640
(114 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P81529|MIFH_TRISP Macrophage migration inhibitory factor homolog OS=Trichinella
spiralis PE=1 SV=2
Length = 114
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP ++TN+K V S LS ++ V NI+ KP +YV + + +SFGG+ PAA+
Sbjct: 1 MPIFTLNTNIKATDV-PSDFLSSTSALVGNILSKPGSYVAVHINTDQQLSFGGSTKPAAF 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKF 100
G L+SIGG+ P N+ SA + L KKL +PK+R +I F
Sbjct: 60 GTLMSIGGIEPSRNRDHSAKLFDHLNKKLGIPKNRMYIHF 99
>sp|P91850|MIFH_BRUMA Macrophage migration inhibitory factor homolog OS=Brugia malayi
GN=Bm1_28435 PE=3 SV=4
Length = 115
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP I TN+ + + +S+ L +A++ VA +GKPE+YV I + G M FGG+EDP A
Sbjct: 1 MPYFTIDTNIPQNSI-SSAFLKKASNVVAKALGKPESYVSIHVNGGQAMVFGGSEDPCAV 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKASHFNF 110
L SIG + P VN + + +L +L +PK+R +I+F D +AS F
Sbjct: 60 CVLKSIGCVGPKVNNSHAEKLYKLLADELKIPKNRCYIEFVDIEASSMAF 109
>sp|P81748|MIFH_TRITR Macrophage migration inhibitory factor homolog OS=Trichuris
trichiura PE=1 SV=2
Length = 114
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP STNV + + L + +A ++GKPE+YV + + G ++FGGT+ PA +
Sbjct: 1 MPIFTFSTNVPSENISVD-FLKSTSKLIAGMLGKPESYVAVHINGGQKITFGGTDAPAGF 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKAS 106
G+L+S+GG+ + N+ SA + L L +P +R +I F D + S
Sbjct: 60 GQLLSLGGVGGEKNRSHSAKLFKHLTDGLGIPGNRMYINFVDMRGS 105
>sp|O44786|MIFH_WUCBA Macrophage migration inhibitory factor homolog OS=Wuchereria
bancrofti GN=MIF PE=3 SV=3
Length = 115
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP I TN D + +S+ L +A + V +GKPE+YV I + G PM FGG+EDP
Sbjct: 1 MPYFTIDTNKPQDSI-SSAFLKKAPNVVPKALGKPESYVSIHVNGGQPMVFGGSEDPCPV 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKASHFNF 110
L SIG + P VN + + +L +L +PK+R +I+ D +AS F
Sbjct: 60 CVLKSIGCVGPKVNNSHAEKLYKLLADELKIPKNRCYIESVDIEASSMAF 109
>sp|Q76BK2|MIF_XENLA Macrophage migration inhibitory factor OS=Xenopus laevis GN=mif
PE=1 SV=1
Length = 115
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP I TNV D V ++LS+ T +A GKP Y+ I + MSFG + DP A
Sbjct: 1 MPVFTIRTNVCRDSV-PDTLLSDLTKQLAKATGKPAEYIAIHIVPDQIMSFGDSTDPCAV 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKASHFNF 110
L SIG + NK + + IL K+L++P +R +I +YD A++ +
Sbjct: 60 CSLCSIGKIGGPQNKSYTKLLCDILTKQLNIPANRVYINYYDLNAANVGW 109
>sp|Q02960|MIF_CHICK Macrophage migration inhibitory factor OS=Gallus gallus GN=MIF PE=2
SV=3
Length = 115
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP I TNV D V S+L E T +A GKP Y+ + + MSFGG+ DP A
Sbjct: 1 MPMFTIHTNVCKDAV-PDSLLGELTQQLAKATGKPAQYIAVHIVPDQMMSFGGSTDPCAL 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKASHFNF 110
L SIG + NK + + ++ K L V R +I ++D A++ +
Sbjct: 60 CSLYSIGKIGGQQNKTYTKLLCDMIAKHLHVSADRVYINYFDINAANVGW 109
>sp|A9JSE7|MIF_XENTR Macrophage migration inhibitory factor OS=Xenopus tropicalis GN=mif
PE=3 SV=1
Length = 115
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP + TNV D + ++LS+ T +A GKP Y+ I + MSFG + DP A
Sbjct: 1 MPTFTVCTNVCRDSM-PDTLLSDLTKLLAKATGKPAEYIAIHIMPDQMMSFGDSTDPCAV 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKASHFNF 110
L SIG + NK S + L K++++P +R +I F+D ++ +
Sbjct: 60 CSLSSIGKIGGPQNKSYSKLLCDYLTKQMNIPANRVYINFHDLNPANVGW 109
>sp|P34884|MIF_MOUSE Macrophage migration inhibitory factor OS=Mus musculus GN=Mif PE=1
SV=2
Length = 115
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP ++TNV V LSE T +A GKP Y+ + + M+F GT DP A
Sbjct: 1 MPMFIVNTNVPRASV-PEGFLSELTQQLAQATGKPAQYIAVHVVPDQLMTFSGTNDPCAL 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKASHFNF 110
L SIG + N+ S + +L +L + R +I +YD A++ +
Sbjct: 60 CSLHSIGKIGGAQNRNYSKLLCGLLSDRLHISPDRVYINYYDMNAANVGW 109
>sp|P30904|MIF_RAT Macrophage migration inhibitory factor OS=Rattus norvegicus GN=Mif
PE=1 SV=4
Length = 115
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP ++TNV V LSE T +A GKP Y+ + + M+F GT DP A
Sbjct: 1 MPMFIVNTNVPRASV-PEGFLSELTQQLAQATGKPAQYIAVHVVPDQLMTFSGTSDPCAL 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKASHFNF 110
L SIG + N+ S + +L +L + R +I +YD A++ +
Sbjct: 60 CSLHSIGKIGGAQNRNYSKLLCGLLSDRLHISPDRVYINYYDMNAANVGW 109
>sp|O55052|MIF_MERUN Macrophage migration inhibitory factor OS=Meriones unguiculatus
GN=MIF PE=3 SV=3
Length = 115
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP ++TNV V +LSE T +A GKP Y+ + + M+F G+ DP A
Sbjct: 1 MPMFIVNTNVPRSSV-PEGLLSELTQQLAQATGKPAQYIAVHVVPDQLMTFSGSSDPCAL 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKASHFNF 110
L SIG + N+ S + +L +L + R +I +YD A++ +
Sbjct: 60 CSLHSIGKIGGAQNRTYSKLLCGLLADRLRISPDRIYINYYDMNAANVGW 109
>sp|Q6DN04|MIF_MACMU Macrophage migration inhibitory factor OS=Macaca mulatta GN=MIF
PE=3 SV=4
Length = 115
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP ++TNV V LSE T +A GKP Y+ + + M+FGG+ +P A
Sbjct: 1 MPMFIVNTNVPRASV-PDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCAL 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKASHFNF 110
L SIG + N+ S + +L ++L + R +I +YD A++ +
Sbjct: 60 CSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNAANVGW 109
>sp|Q4R549|MIF_MACFA Macrophage migration inhibitory factor OS=Macaca fascicularis
GN=MIF PE=3 SV=3
Length = 115
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP ++TNV V LSE T +A GKP Y+ + + M+FGG+ +P A
Sbjct: 1 MPMFIVNTNVPRASV-PDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCAL 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKASHFNF 110
L SIG + N+ S + +L ++L + R +I +YD A++ +
Sbjct: 60 CSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNAANVGW 109
>sp|P14174|MIF_HUMAN Macrophage migration inhibitory factor OS=Homo sapiens GN=MIF PE=1
SV=4
Length = 115
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP ++TNV V LSE T +A GKP Y+ + + M+FGG+ +P A
Sbjct: 1 MPMFIVNTNVPRASV-PDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCAL 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKASHFNF 110
L SIG + N+ S + +L ++L + R +I +YD A++ +
Sbjct: 60 CSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNAANVGW 109
>sp|P80928|MIF_PIG Macrophage migration inhibitory factor OS=Sus scrofa GN=MIF PE=1
SV=3
Length = 115
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP ++TNV V LSE T + +GKP Y+ + + M+FGG+ +P A
Sbjct: 1 MPMFVVNTNVPRASV-PDGFLSELTQQLVQAMGKPAQYIAVHVVPDQLMAFGGSSEPCAL 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKASHFNF 110
L SIG + N+ S + +L ++L + R +I +YD A++ +
Sbjct: 60 CSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRIYINYYDMNAANVGW 109
>sp|Q1ZZU7|MIF_SHEEP Macrophage migration inhibitory factor OS=Ovis aries GN=MIF PE=3
SV=1
Length = 115
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP ++TNV V +LSE T +A GKP Y+ + + M+FGG+ +P A
Sbjct: 1 MPMFVVNTNVPRASV-PDGLLSELTQQLAQATGKPAQYIAVHVVPDQLMTFGGSSEPCAL 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKASHFNF 110
L SIG + N+ S + +L ++L + R +I F D A++ +
Sbjct: 60 CSLHSIGKIGGAQNRSYSKLLCGLLTERLRISPDRIYINFCDMNAANVGW 109
>sp|P80177|MIF_BOVIN Macrophage migration inhibitory factor OS=Bos taurus GN=MIF PE=1
SV=6
Length = 115
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP ++TNV V +LSE T +A GKP Y+ + + M+FGG+ +P A
Sbjct: 1 MPMFVVNTNVPRASV-PDGLLSELTQQLAQATGKPAQYIAVHVVPDQLMTFGGSSEPCAL 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKASHFNF 110
L SIG + N+ S + +L ++L + R +I F D A++ +
Sbjct: 60 CSLHSIGKIGGAQNRSYSKLLCGLLTERLRISPDRIYINFCDMNAANVGW 109
>sp|Q18785|MIF2_CAEEL MIF-like protein mif-2 OS=Caenorhabditis elegans GN=mif-2 PE=2 SV=1
Length = 120
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP + ++TN+ + V + T +A +GKP + + + + G T DP
Sbjct: 1 MPMVRVATNLPNEKVPVDFEI-RLTDLLARSMGKPRERIAVEIAAGARLVHGATHDPVTV 59
Query: 61 GELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKASHFNF 110
+ SIG ++ + N + +AAI+ K+L +PK + I F+D + F
Sbjct: 60 ISIKSIGAVSAEDNIRNTAAITEFCGKELGLPKDKVVITFHDLPPATVGF 109
>sp|P30046|DOPD_HUMAN D-dopachrome decarboxylase OS=Homo sapiens GN=DDT PE=1 SV=3
Length = 118
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP L + TN+ + V + + + A+I+GKP V + ++ + M+ G+ +P A
Sbjct: 1 MPFLELDTNLPANRVP-AGLEKRLCAAAASILGKPADRVNVTVRPGLAMALSGSTEPCAQ 59
Query: 61 GELVSIG--GLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFY 101
+ SIG G D N+ SA L K+L++ + R I+F+
Sbjct: 60 LSISSIGVVGTAED-NRSHSAHFFEFLTKELALGQDRILIRFF 101
>sp|Q640C5|DOPDB_XENLA D-dopachrome decarboxylase-B OS=Xenopus laevis GN=ddt-b PE=3 SV=1
Length = 118
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 1 MPCLNISTNVKLDGV--DTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPA 58
MP + + TN++ V D + L AT+T I+GKP V + ++ V M GG+ P
Sbjct: 1 MPFVELDTNLQQQEVPQDLAEKLCSATAT---ILGKPRERVNVTVRTGVSMVVGGSSAPC 57
Query: 59 AYGELVSIGGL-NPDVNKKLSAAISAILEKKLSVPKSRFFIKF 100
+ SIG + + NK+ SA L ++L + + R ++F
Sbjct: 58 TQLIISSIGVVGTAEQNKEHSAKFFNFLTEQLGLAQDRILLRF 100
>sp|A6NHG4|DDTL_HUMAN D-dopachrome decarboxylase-like protein OS=Homo sapiens GN=DDTL
PE=2 SV=1
Length = 134
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP L + TN+ + V + + + A+I+GKP V + ++ + M+ G+ +P A
Sbjct: 1 MPFLELDTNLPANRV-PAGLEKRLCAAAASILGKPADRVNVTVRPGLAMALSGSTEPCAQ 59
Query: 61 GELVSIG--GLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKASH 107
+ SIG G D N+ SA L K+L++ + RF + A+H
Sbjct: 60 LSISSIGVVGTAED-NRSHSAHFFEFLTKELALGQDRFPTVLSTSPAAH 107
>sp|Q68FI3|DOPDA_XENLA D-dopachrome decarboxylase-A OS=Xenopus laevis GN=ddt-a PE=3 SV=1
Length = 118
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 1 MPCLNISTNVKLDGV--DTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPA 58
MP + + TN+ V D + L AT+T I+GKP V + ++ V M GG+ P
Sbjct: 1 MPFVELETNLPSQNVPQDLAEKLCSATAT---ILGKPRERVNVTVRTGVSMVVGGSSAPC 57
Query: 59 AYGELVSIGGL-NPDVNKKLSAAISAILEKKLSVPKSRFFIKF 100
+ SIG + + NK+ SA L ++L + + R ++F
Sbjct: 58 TQLFISSIGVVGTAEQNKEHSAKFFNFLTEQLGLAQDRILLRF 100
>sp|Q5ZMG0|DOPD_CHICK D-dopachrome decarboxylase OS=Gallus gallus GN=DDT PE=3 SV=1
Length = 118
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP + + TN+ + + L +T A I+GKP V + ++ +PM G+ +P A
Sbjct: 1 MPFVELETNLPAERLPPGLPLKLCEAT-ATILGKPAERVNVTVRSGMPMVLAGSAEPCAQ 59
Query: 61 GELVSIGGL-NPDVNKKLSAAISAILEKKLSVPKSRFFIKFY 101
+ SIG + + N+ SA L +L + R I+FY
Sbjct: 60 LLVSSIGVVGSAQQNQGHSARFFDFLTTELGLGPERIVIRFY 101
>sp|O35215|DOPD_MOUSE D-dopachrome decarboxylase OS=Mus musculus GN=Ddt PE=1 SV=3
Length = 118
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP + + TN+ + + + + + A I+ KPE V + ++ + + + +P A+
Sbjct: 1 MPFVELETNLPASRIP-AGLENRLCAATATILDKPEDRVSVTIRPGMTLLMNKSTEPCAH 59
Query: 61 GELVSIGGL-NPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKA 105
+ SIG + + N+ SA+ L ++LS+ + R I+F+ +A
Sbjct: 60 LLVSSIGVVGTAEQNRTHSASFFKFLTEELSLDQDRIVIRFFPLEA 105
>sp|P80254|DOPD_RAT D-dopachrome decarboxylase OS=Rattus norvegicus GN=Ddt PE=1 SV=3
Length = 118
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP + + TN+ + + + + + A I+ KPE V + ++ + + + +P A+
Sbjct: 1 MPFVELETNLPASRIP-AGLENRLCAATATILDKPEDRVSVTIRPGMTLLMNKSTEPCAH 59
Query: 61 GELVSIGGL-NPDVNKKLSAAISAILEKKLSVPKSRFFIKFY 101
+ SIG + + N+ S++ L ++LS+ + R I+F+
Sbjct: 60 LLISSIGVVGTAEQNRSHSSSFFKFLTEELSLDQDRIIIRFF 101
>sp|A5PK65|DOPD_BOVIN D-dopachrome decarboxylase OS=Bos taurus GN=DDT PE=3 SV=1
Length = 118
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 1 MPCLNISTNVKLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAY 60
MP + + T++ V + + + A I+ KPE V + ++ + M G+ +P+A
Sbjct: 1 MPFVELDTSLPAGRV-PAGLEKRLCAATAAILSKPEDRVNVTVRSGLAMVVNGSAEPSAQ 59
Query: 61 GELVSIGGL-NPDVNKKLSAAISAILEKKLSVPKSRFFIKFY 101
+ SIG + + N+ SA L K+L + + R I+F+
Sbjct: 60 LLVSSIGVVGTAEENRGHSARFFEFLTKELDLAEDRIMIRFF 101
>sp|Q28J83|DOPD_XENTR D-dopachrome decarboxylase OS=Xenopus tropicalis GN=ddt PE=3 SV=1
Length = 118
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 1 MPCLNISTNVKLDGV--DTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPA 58
MP + + TN+ V D + L AT+T I+ KP V + ++ V M GG+ P
Sbjct: 1 MPFVELDTNLPPQQVPQDLAEKLCSATAT---ILSKPRERVNVTVRTGVSMVVGGSCAPC 57
Query: 59 AYGELVSIGGL-NPDVNKKLSAAISAILEKKLSVPKSRFFIKF 100
+ SIG + + NK+ SA L + + + + R ++F
Sbjct: 58 TQLLVSSIGVVGTAEQNKEHSAKFFQFLTENMGLEQDRILLRF 100
>sp|P90835|MIF3_CAEEL MIF-like protein mif-3 OS=Caenorhabditis elegans GN=mif-3 PE=3 SV=1
Length = 146
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 1 MPCLNISTNVKL--DGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPA 58
MP + + TNVK DG + + +A ++ +PE+ + + L + M+ G DP
Sbjct: 1 MPVIKVQTNVKKVSDGFEVRLAIH-----MAKVMKRPESQIFVSLDMNSRMTRGQLTDPL 55
Query: 59 AYGELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKF 100
A ++ S L P + ++ + A+ ++L++ I +
Sbjct: 56 AVLDVTSSTVLTPILTEEYTVALCEFFSQELALDSDAVLINY 97
>sp|A5A752|EDN3_PIG Endothelin-3 OS=Sus scrofa GN=EDN3 PE=2 SV=1
Length = 204
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 36 EAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGG 68
E M+ +G P S G ++P +GEL + GG
Sbjct: 42 ETMAMVATRGPSPRSSGQEQEPGPFGELAAKGG 74
>sp|Q5UQD2|PNKP_MIMIV Putative bifunctional polynucleotide phosphatase/kinase
OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L469 PE=3
SV=1
Length = 421
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 5 NISTNVKLDGVDTSSILSEATST-VANIIGKPEAYVMIVLKGS 46
N+ TN KL GV+ + I+ E +T + N KP MIV+ G
Sbjct: 224 NLKTNYKLSGVNPTEIIDEIENTKLVNYKFKPRKKEMIVMIGQ 266
>sp|Q0WW84|RB47B_ARATH Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana
GN=RBP47B PE=2 SV=1
Length = 435
Score = 29.3 bits (64), Expect = 7.2, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 49 MSFGGTEDPAAYGELVSIGGLNPDV-NKKLSAAISA---ILEKKLSVPKSRFFIKFYDTK 104
M +G D + + +GG++PDV ++ L S ++ K+ V K F++F D K
Sbjct: 308 MGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRK 367
Query: 105 AS 106
++
Sbjct: 368 SA 369
>sp|A9BXL3|CH60_DELAS 60 kDa chaperonin OS=Delftia acidovorans (strain DSM 14801 / SPH-1)
GN=groL PE=3 SV=1
Length = 547
Score = 29.3 bits (64), Expect = 7.5, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 28 VANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNP 71
VAN G+P V VL GS F D YG+++ +G L+P
Sbjct: 455 VANAGGEPSVVVNAVLNGSGNYGFNAAND--TYGDMLEMGILDP 496
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,755,822
Number of Sequences: 539616
Number of extensions: 1388085
Number of successful extensions: 4375
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 4348
Number of HSP's gapped (non-prelim): 40
length of query: 114
length of database: 191,569,459
effective HSP length: 82
effective length of query: 32
effective length of database: 147,320,947
effective search space: 4714270304
effective search space used: 4714270304
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)