BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033646
(114 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6L3N7|R1C3_SOLDE Putative late blight resistance protein homolog R1C-3 OS=Solanum
demissum GN=R1C-3 PE=3 SV=1
Length = 1292
Score = 37.4 bits (85), Expect = 0.027, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 7 LAGVDSISMDMKEKKLTVIGDIDPVS---IVSKLRKLCHTE 44
+ G++SIS DMKEKKLTV D+D +V KLR + + +
Sbjct: 1237 MKGIESISTDMKEKKLTVTRDVDADEVQLVVEKLRNVAYAD 1277
>sp|Q6L440|R1A3_SOLDE Putative late blight resistance protein homolog R1A-3 OS=Solanum
demissum GN=R1A-3 PE=5 SV=2
Length = 775
Score = 37.4 bits (85), Expect = 0.029, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 2 KTVSGLAGVDSISMDMKEKKLTVIGDIDPVSIVSKLRKLCHTEIL 46
K ++ L GVDSIS+DM EKKLTV GD++ + + KL + +L
Sbjct: 731 KRLASLPGVDSISIDMIEKKLTVGGDMNANEVRLVVGKLIDSGML 775
>sp|Q6L3L0|R1B23_SOLDE Putative late blight resistance protein homolog R1B-23 OS=Solanum
demissum GN=R1B-23 PE=3 SV=1
Length = 1262
Score = 37.0 bits (84), Expect = 0.032, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 7 LAGVDSISMDMKEKKLTVIGDIDPVS---IVSKLRKLCHTE 44
+ G++SIS DMKEKKLTV D+D +V KLR + + +
Sbjct: 1207 MKGIESISTDMKEKKLTVTRDVDADEVQLVVEKLRNVAYAD 1247
>sp|Q6L438|R1A6_SOLDE Putative late blight resistance protein homolog R1A-6 OS=Solanum
demissum GN=R1A-6 PE=3 SV=2
Length = 1306
Score = 36.6 bits (83), Expect = 0.043, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
Query: 9 GVDSISMDMKEKKLTVIGDIDPVS---IVSKLRK 39
G++S+S D KEKKLTV GD+D +V KLRK
Sbjct: 1267 GIESVSSDEKEKKLTVTGDVDADEVQLVVEKLRK 1300
>sp|Q60CZ8|R1A10_SOLDE Putative late blight resistance protein homolog R1A-10 OS=Solanum
demissum GN=R1A-10 PE=3 SV=1
Length = 1306
Score = 36.6 bits (83), Expect = 0.043, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
Query: 9 GVDSISMDMKEKKLTVIGDIDPVS---IVSKLRK 39
G++S+S D KEKKLTV GD+D +V KLRK
Sbjct: 1267 GIESVSSDEKEKKLTVTGDVDADEVQLVVEKLRK 1300
>sp|Q6L403|R1B17_SOLDE Putative late blight resistance protein homolog R1B-17 OS=Solanum
demissum GN=R1B-17 PE=3 SV=1
Length = 1312
Score = 36.2 bits (82), Expect = 0.061, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 2 KTVSGLAGVDSISMDMKEKKLTVIGDIDPVS---IVSKLRK 39
K ++ L G+ S++ D +KKLTV GD+D +VSKLRK
Sbjct: 1268 KRLAPLPGIKSVAFDFNKKKLTVTGDMDANEVQLVVSKLRK 1308
>sp|Q6L406|R1B19_SOLDE Putative late blight resistance protein homolog R1B-19 OS=Solanum
demissum GN=R1B-19 PE=5 SV=2
Length = 1326
Score = 35.8 bits (81), Expect = 0.069, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 9 GVDSISMDMKEKKLTVIGDIDPVSIVS 35
G++S+S D KEKKLTV GD+D S +S
Sbjct: 1236 GIESVSTDRKEKKLTVTGDVDAGSSIS 1262
>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26
OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1
Length = 153
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 27/36 (75%)
Query: 2 KTVSGLAGVDSISMDMKEKKLTVIGDIDPVSIVSKL 37
++V G+ GV S++++ K K+TV+G +DP +V+++
Sbjct: 45 RSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARM 80
>sp|Q6L3Y2|R1B11_SOLDE Putative late blight resistance protein homolog R1B-11 OS=Solanum
demissum GN=R1B-11 PE=5 SV=1
Length = 1252
Score = 33.9 bits (76), Expect = 0.31, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 2 KTVSGLAGVDSISMDMKEKKLTVIGDIDPVS---IVSKLRK 39
K +S L G+ SIS++ EKKLTV GD+D +V KL K
Sbjct: 1208 KRLSSLPGIKSISINRGEKKLTVGGDVDADEVRLVVGKLNK 1248
>sp|Q6L3Z7|R1B14_SOLDE Putative late blight resistance protein homolog R1B-14 OS=Solanum
demissum GN=R1B-14 PE=3 SV=1
Length = 1317
Score = 33.5 bits (75), Expect = 0.34, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 2 KTVSGLAGVDSISMDMKEKKLTVIGDIDPVS---IVSKLRK 39
K + L GV S+ DM EKK+TV G +D +VSKLRK
Sbjct: 1273 KKLVPLPGVKSVRFDMDEKKVTVTGVMDANEVQLVVSKLRK 1313
>sp|Q6L400|R1B16_SOLDE Putative late blight resistance protein homolog R1B-16 OS=Solanum
demissum GN=R1B-16 PE=3 SV=1
Length = 1284
Score = 33.1 bits (74), Expect = 0.46, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 7 LAGVDSISMDMKEKKLTVIGDIDPVS---IVSKLRK 39
L G++SIS D KEKKLTV D+D +V K RK
Sbjct: 1245 LIGIESISTDTKEKKLTVTRDVDADEVQLVVEKQRK 1280
>sp|Q8TFZ1|XRN2_ASPFU 5'-3' exoribonuclease 2 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rat1 PE=3
SV=4
Length = 1058
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 11 DSISMDMKEKKLTVIGDIDPVSIVSKLRKLCHTEILSVGPAKEPEKKKEEPKKEEAKKDD 70
D + ++ +KL +I +D V+ +K+ + S AKE ++KKEE +K AK++
Sbjct: 86 DRVVNMVRPRKLLMIA-VDGVAPRAKMNQQRARRFRSAQEAKEADEKKEEFRKMLAKQNG 144
Query: 71 KKKDEPKKDDV 81
K DE +++V
Sbjct: 145 NKVDEELQEEV 155
>sp|A7ZC69|IF2_CAMC1 Translation initiation factor IF-2 OS=Campylobacter concisus
(strain 13826) GN=infB PE=3 SV=1
Length = 885
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 54 PEKKKEEPKKEEAKKDDKKKDEPKKDD 80
PEK K EPKKE ++K K EPKK++
Sbjct: 102 PEKAKAEPKKEAQISEEKPKTEPKKEE 128
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.128 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,645,022
Number of Sequences: 539616
Number of extensions: 1853367
Number of successful extensions: 27757
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 249
Number of HSP's that attempted gapping in prelim test: 20636
Number of HSP's gapped (non-prelim): 5305
length of query: 114
length of database: 191,569,459
effective HSP length: 82
effective length of query: 32
effective length of database: 147,320,947
effective search space: 4714270304
effective search space used: 4714270304
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)