Query 033646
Match_columns 114
No_of_seqs 189 out of 802
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 07:17:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033646.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033646hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 98.6 6.4E-08 2.2E-12 59.1 4.6 46 2-48 21-67 (68)
2 1cc8_A Protein (metallochapero 98.4 4.8E-07 1.6E-11 55.4 5.6 47 2-48 24-72 (73)
3 2crl_A Copper chaperone for su 98.3 2.8E-06 9.6E-11 56.0 6.8 51 2-52 38-89 (98)
4 4a4j_A Pacszia, cation-transpo 98.2 2.1E-06 7.1E-11 51.5 4.6 45 2-46 22-69 (69)
5 3dxs_X Copper-transporting ATP 98.0 8.8E-06 3E-10 49.5 4.8 47 2-48 22-72 (74)
6 2roe_A Heavy metal binding pro 98.0 7.1E-06 2.4E-10 48.5 3.7 45 2-46 20-65 (66)
7 2xmm_A SSR2857 protein, ATX1; 97.9 1E-05 3.4E-10 46.6 3.4 42 2-43 21-63 (64)
8 3fry_A Probable copper-exporti 97.8 1.5E-05 5E-10 48.9 2.7 45 2-48 25-70 (73)
9 1cpz_A Protein (COPZ); copper 97.6 0.00016 5.3E-09 41.9 5.3 44 2-45 20-67 (68)
10 2k2p_A Uncharacterized protein 97.6 5.7E-05 1.9E-09 48.3 3.6 42 2-43 42-84 (85)
11 1qup_A Superoxide dismutase 1 97.6 0.00012 4.3E-09 55.3 6.0 50 2-51 25-75 (222)
12 1fvq_A Copper-transporting ATP 97.5 0.00012 4E-09 43.0 4.1 46 2-47 22-70 (72)
13 1aw0_A Menkes copper-transport 97.5 0.00018 6.2E-09 42.2 4.9 44 2-45 23-70 (72)
14 2xmw_A PACS-N, cation-transpor 97.5 0.00023 7.8E-09 41.5 5.2 44 2-45 23-69 (71)
15 1osd_A MERP, hypothetical prot 97.5 0.00026 9E-09 41.5 5.4 44 2-45 23-70 (72)
16 1jk9_B CCS, copper chaperone f 97.4 0.00021 7.2E-09 55.1 6.0 50 2-51 26-76 (249)
17 2l3m_A Copper-ION-binding prot 97.4 0.00018 6E-09 42.2 4.1 42 2-43 25-70 (71)
18 3cjk_B Copper-transporting ATP 97.4 0.0005 1.7E-08 40.9 5.8 47 2-48 22-72 (75)
19 1yjr_A Copper-transporting ATP 97.3 0.00028 9.6E-09 41.7 3.9 46 2-47 24-73 (75)
20 1p6t_A Potential copper-transp 97.3 0.00029 9.9E-09 47.6 4.3 47 2-48 94-144 (151)
21 1kvi_A Copper-transporting ATP 97.3 0.00034 1.2E-08 42.2 4.1 47 2-48 28-78 (79)
22 1q8l_A Copper-transporting ATP 97.2 0.0005 1.7E-08 42.5 4.9 46 2-47 29-78 (84)
23 2g9o_A Copper-transporting ATP 97.2 0.00033 1.1E-08 44.5 4.1 47 2-48 23-76 (90)
24 1yg0_A COP associated protein; 97.2 0.0006 2.1E-08 39.1 4.9 40 2-41 21-62 (66)
25 2kt2_A Mercuric reductase; nme 97.2 0.00035 1.2E-08 40.8 3.9 44 2-45 20-66 (69)
26 2qif_A Copper chaperone COPZ; 97.2 0.00046 1.6E-08 39.3 4.0 40 2-41 22-64 (69)
27 2ew9_A Copper-transporting ATP 97.1 0.00048 1.6E-08 46.2 4.0 44 2-45 100-147 (149)
28 2kyz_A Heavy metal binding pro 97.1 0.00025 8.4E-09 41.8 2.1 41 2-44 21-62 (67)
29 1y3j_A Copper-transporting ATP 97.0 0.00072 2.5E-08 40.6 3.8 46 2-47 23-72 (77)
30 2ldi_A Zinc-transporting ATPas 97.0 0.0013 4.4E-08 37.8 4.8 42 2-43 23-68 (71)
31 1opz_A Potential copper-transp 97.0 0.00063 2.2E-08 39.9 3.2 44 2-45 26-73 (76)
32 1mwy_A ZNTA; open-faced beta-s 96.9 0.0019 6.3E-08 38.3 4.9 43 2-44 23-67 (73)
33 2kkh_A Putative heavy metal tr 96.8 0.0026 8.8E-08 40.3 5.2 48 2-49 36-87 (95)
34 2rop_A Copper-transporting ATP 96.6 0.0028 9.6E-08 45.5 5.0 47 2-48 142-192 (202)
35 2ofg_X Zinc-transporting ATPas 96.4 0.0052 1.8E-07 40.5 5.2 44 2-45 28-75 (111)
36 1jww_A Potential copper-transp 96.4 0.0023 7.8E-08 38.1 3.0 46 2-47 23-72 (80)
37 2aj0_A Probable cadmium-transp 96.0 0.0064 2.2E-07 35.8 3.3 36 2-41 23-58 (71)
38 2ew9_A Copper-transporting ATP 95.1 0.029 9.8E-07 37.2 4.5 45 2-46 24-72 (149)
39 3bpd_A Uncharacterized protein 93.4 0.064 2.2E-06 36.6 3.2 40 2-41 26-73 (100)
40 2raq_A Conserved protein MTH88 92.8 0.1 3.4E-06 35.4 3.5 40 2-41 26-73 (97)
41 2x3d_A SSO6206; unknown functi 92.7 0.1 3.4E-06 35.4 3.4 40 2-41 25-72 (96)
42 2rop_A Copper-transporting ATP 92.6 0.15 5.1E-06 36.2 4.5 39 2-40 40-81 (202)
43 1p6t_A Potential copper-transp 91.5 0.18 6E-06 33.5 3.6 40 2-41 26-68 (151)
44 3j09_A COPA, copper-exporting 89.8 0.28 9.5E-06 42.3 4.1 43 2-44 22-68 (723)
45 2cpq_A FragIle X mental retard 65.1 7.9 0.00027 25.4 3.8 37 2-39 38-74 (91)
46 2kgs_A Uncharacterized protein 56.9 3.2 0.00011 28.5 0.8 28 11-38 77-104 (132)
47 2jsx_A Protein NAPD; TAT, proo 54.5 25 0.00085 22.9 4.9 37 2-38 24-61 (95)
48 3q9p_A Heat shock protein beta 54.3 10 0.00035 23.7 2.9 26 4-29 12-39 (85)
49 2wj5_A Heat shock protein beta 51.8 9.2 0.00031 24.7 2.4 24 5-28 17-42 (101)
50 2y1y_A Alpha-crystallin B chai 50.7 10 0.00034 23.9 2.4 24 5-28 12-37 (90)
51 2e9h_A EIF-5, eukaryotic trans 48.1 25 0.00085 25.3 4.4 27 13-39 72-98 (157)
52 2g2k_A EIF-5, eukaryotic trans 41.4 27 0.00093 25.4 3.7 26 14-39 66-91 (170)
53 3l1e_A Alpha-crystallin A chai 41.0 17 0.00058 23.6 2.4 24 4-27 17-42 (106)
54 4fei_A Heat shock protein-rela 40.6 13 0.00046 23.8 1.8 25 5-29 22-48 (102)
55 3gzb_A Putative snoal-like pol 40.0 24 0.00083 25.3 3.2 32 6-37 119-151 (154)
56 2d74_B Translation initiation 39.9 27 0.00093 24.8 3.5 25 13-39 75-99 (148)
57 3aab_A Putative uncharacterize 39.9 14 0.00047 24.5 1.8 26 5-30 40-68 (123)
58 2qip_A Protein of unknown func 37.8 22 0.00076 24.5 2.7 29 20-48 111-141 (165)
59 3gla_A Low molecular weight he 36.5 17 0.00058 22.9 1.8 24 5-28 20-45 (100)
60 3pro_C Alpha-lytic protease; P 35.7 37 0.0012 24.4 3.6 35 7-41 113-148 (166)
61 2kvh_A Zinc finger and BTB dom 33.5 7.9 0.00027 17.4 -0.2 9 106-114 1-9 (27)
62 2ytk_A Zinc finger protein 347 33.0 15 0.00051 18.9 0.9 11 104-114 36-46 (46)
63 1gme_A Heat shock protein 16.9 31.8 32 0.0011 23.7 2.7 24 5-28 59-85 (151)
64 1srk_A Zinc finger protein ZFP 30.9 11 0.00037 18.1 0.1 11 104-114 3-13 (35)
65 4eld_A MJ16.5-P1, small heat s 29.7 31 0.0011 23.8 2.3 25 5-29 72-98 (161)
66 2hh2_A KH-type splicing regula 28.9 28 0.00095 22.7 1.9 33 3-38 31-71 (107)
67 2ytn_A Zinc finger protein 347 28.7 20 0.00068 18.3 0.9 12 103-114 35-46 (46)
68 2eq0_A Zinc finger protein 347 28.1 19 0.00065 18.4 0.8 12 103-114 35-46 (46)
69 2emf_A Zinc finger protein 484 27.9 20 0.0007 18.4 0.9 12 103-114 35-46 (46)
70 2elt_A Zinc finger protein 406 27.6 12 0.00041 17.9 -0.1 11 104-114 5-15 (36)
71 2elo_A Zinc finger protein 406 26.9 16 0.00056 17.6 0.4 11 104-114 5-15 (37)
72 3ami_A Zinc peptidase; alpha/b 26.9 47 0.0016 25.4 3.1 21 20-40 190-210 (445)
73 2elr_A Zinc finger protein 406 26.5 19 0.00066 17.1 0.6 11 104-114 5-15 (36)
74 2elx_A Zinc finger protein 406 26.2 14 0.00048 17.5 -0.0 10 105-114 4-13 (35)
75 2ema_A Zinc finger protein 347 26.1 22 0.00077 18.1 0.8 12 103-114 35-46 (46)
76 2yte_A Zinc finger protein 473 25.6 19 0.00065 17.9 0.5 11 104-114 6-16 (42)
77 2k1h_A Uncharacterized protein 25.4 84 0.0029 20.4 3.7 35 3-39 44-80 (94)
78 1nho_A Probable thioredoxin; b 25.2 94 0.0032 17.3 3.7 30 7-39 53-82 (85)
79 2eoe_A Zinc finger protein 347 25.1 24 0.00082 17.9 0.8 12 103-114 35-46 (46)
80 2elq_A Zinc finger protein 406 25.0 14 0.00049 17.8 -0.1 11 104-114 5-15 (36)
81 2epr_A POZ-, at HOOK-, and zin 25.0 25 0.00087 18.3 0.9 12 103-114 35-46 (48)
82 2elp_A Zinc finger protein 406 24.3 16 0.00053 17.7 -0.1 11 104-114 5-15 (37)
83 1fo5_A Thioredoxin; disulfide 24.2 77 0.0026 17.8 3.1 30 7-39 54-83 (85)
84 2elm_A Zinc finger protein 406 24.2 12 0.0004 18.5 -0.6 11 104-114 5-15 (37)
85 2eop_A Zinc finger protein 268 23.9 26 0.0009 17.8 0.9 12 103-114 35-46 (46)
86 1p7a_A BF3, BKLF, kruppel-like 23.7 19 0.00067 17.3 0.3 11 104-114 7-17 (37)
87 2emh_A Zinc finger protein 484 23.7 26 0.0009 17.8 0.8 11 104-114 36-46 (46)
88 1hfe_L Protein (Fe-only hydrog 23.5 1E+02 0.0035 24.6 4.7 38 2-39 325-365 (421)
89 2epx_A Zinc finger protein 28 23.2 27 0.00093 17.7 0.8 12 103-114 36-47 (47)
90 2elv_A Zinc finger protein 406 23.1 17 0.00058 17.5 -0.1 11 104-114 5-15 (36)
91 2kvg_A Zinc finger and BTB dom 22.9 15 0.00051 16.6 -0.3 9 106-114 1-9 (27)
92 2ytd_A Zinc finger protein 473 22.7 26 0.00089 17.8 0.7 12 103-114 35-46 (46)
93 2enc_A Zinc finger protein 224 22.7 30 0.001 17.6 0.9 12 103-114 35-46 (46)
94 3boe_A Cadmium-specific carbon 22.4 58 0.002 24.3 2.7 21 28-48 2-23 (210)
95 3eoq_A Putative zinc protease; 22.4 64 0.0022 24.3 3.1 21 20-40 183-203 (406)
96 2eme_A Zinc finger protein 473 22.2 31 0.0011 17.5 0.9 12 103-114 35-46 (46)
97 2eos_A B-cell lymphoma 6 prote 22.2 24 0.00084 17.6 0.5 11 104-114 7-17 (42)
98 2k6g_A Replication factor C su 22.1 1.1E+02 0.0038 20.1 3.9 25 17-41 33-60 (109)
99 2opv_A KHSRP protein; KH domai 22.1 38 0.0013 20.9 1.5 32 4-38 39-77 (85)
100 2ep2_A Zinc finger protein 484 22.0 30 0.001 17.6 0.8 12 103-114 35-46 (46)
101 2gjh_A Designed protein; oblig 21.9 54 0.0019 19.6 2.0 21 9-29 31-51 (62)
102 1uwd_A Hypothetical protein TM 21.8 35 0.0012 21.7 1.3 16 3-18 68-83 (103)
103 2ent_A Krueppel-like factor 15 21.8 30 0.001 17.6 0.8 12 103-114 37-48 (48)
104 2dt9_A Aspartokinase; protein- 21.8 94 0.0032 21.2 3.7 44 8-51 5-53 (167)
105 2ytj_A Zinc finger protein 484 21.5 30 0.001 17.6 0.8 12 103-114 35-46 (46)
106 2emy_A Zinc finger protein 268 21.5 29 0.001 17.6 0.7 12 103-114 35-46 (46)
107 1j5k_A Heterogeneous nuclear r 21.4 44 0.0015 20.8 1.7 25 3-28 38-67 (89)
108 2yu8_A Zinc finger protein 347 21.4 30 0.001 17.6 0.8 12 103-114 35-46 (46)
109 3cq1_A Putative uncharacterize 21.3 38 0.0013 21.6 1.4 16 3-18 67-82 (103)
110 3amj_B Zinc peptidase inactive 21.2 75 0.0025 23.8 3.2 23 19-41 189-211 (424)
111 3mso_A Steroid delta-isomerase 21.2 55 0.0019 21.8 2.3 34 6-39 95-128 (143)
112 2elz_A Zinc finger protein 224 21.1 33 0.0011 17.5 0.9 12 103-114 35-46 (46)
113 1nee_A EIF-2-beta, probable tr 21.1 35 0.0012 23.8 1.3 24 14-39 74-97 (138)
114 2emk_A Zinc finger protein 28 21.1 33 0.0011 17.5 0.9 12 103-114 35-46 (46)
115 2ytm_A Zinc finger protein 28 21.1 33 0.0011 17.6 0.9 12 103-114 35-46 (46)
116 2ytt_A Zinc finger protein 473 20.9 30 0.001 17.7 0.7 12 103-114 35-46 (46)
117 2ene_A Zinc finger protein 347 20.9 35 0.0012 17.3 0.9 12 103-114 35-46 (46)
118 2eq4_A Zinc finger protein 224 20.8 35 0.0012 17.2 1.0 12 103-114 35-46 (46)
119 2eoq_A Zinc finger protein 224 20.7 33 0.0011 17.4 0.8 12 103-114 35-46 (46)
120 2el4_A Zinc finger protein 268 20.7 28 0.00096 17.6 0.5 12 103-114 35-46 (46)
121 1hr6_B Beta-MPP, mitochondrial 20.7 73 0.0025 24.1 3.1 20 21-40 190-209 (443)
122 3flj_A Uncharacterized protein 20.6 49 0.0017 23.2 2.0 34 6-39 102-135 (155)
123 2emp_A Zinc finger protein 347 20.5 35 0.0012 17.3 0.9 11 104-114 36-46 (46)
124 2emx_A Zinc finger protein 268 20.5 35 0.0012 17.1 0.9 12 103-114 33-44 (44)
125 2en1_A Zinc finger protein 224 20.4 34 0.0012 17.3 0.9 12 103-114 35-46 (46)
126 2yth_A Zinc finger protein 224 20.3 28 0.00094 17.8 0.5 11 104-114 8-18 (46)
127 2en7_A Zinc finger protein 268 20.3 28 0.00096 17.4 0.5 11 104-114 8-18 (44)
128 2ytr_A Zinc finger protein 347 20.3 34 0.0012 17.3 0.8 12 103-114 35-46 (46)
129 2ely_A Zinc finger protein 224 20.3 36 0.0012 17.3 0.9 12 103-114 35-46 (46)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=98.58 E-value=6.4e-08 Score=59.14 Aligned_cols=46 Identities=20% Similarity=0.382 Sum_probs=43.3
Q ss_pred ccccCCCCccEEEEecCCCeEEEEeeCCHHHHHHHHHhcC-CeEEeec
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGDIDPVSIVSKLRKLC-HTEILSV 48 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK~g-~aeivsv 48 (114)
++|.+++|| ++.+|+..++++|.|.+++..|+++|++.| .+.++++
T Consensus 21 ~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~ 67 (68)
T 3iwl_A 21 RVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGL 67 (68)
T ss_dssp HHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEEC
T ss_pred HHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecCC
Confidence 468889999 999999999999999999999999999999 9999875
No 2
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=98.42 E-value=4.8e-07 Score=55.37 Aligned_cols=47 Identities=17% Similarity=0.215 Sum_probs=43.3
Q ss_pred ccccCCC-CccEEEEecCCCeEEEEeeCCHHHHHHHHHhcC-CeEEeec
Q 033646 2 KTVSGLA-GVDSISMDMKEKKLTVIGDIDPVSIVSKLRKLC-HTEILSV 48 (114)
Q Consensus 2 Kal~~l~-GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK~g-~aeivsv 48 (114)
++|.+++ ||.++.+|+..++++|.+.+++..|.++|++.| .+.++.+
T Consensus 24 ~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~ 72 (73)
T 1cc8_A 24 KVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGKQ 72 (73)
T ss_dssp HHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEEEEE
T ss_pred HHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCceeeec
Confidence 4788999 999999999999999999999999999999999 8888754
No 3
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.26 E-value=2.8e-06 Score=55.97 Aligned_cols=51 Identities=16% Similarity=0.361 Sum_probs=46.7
Q ss_pred ccccCCCCccEEEEecCCCeEEEEeeCCHHHHHHHHHhcC-CeEEeecCCCC
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGDIDPVSIVSKLRKLC-HTEILSVGPAK 52 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK~g-~aeivsv~p~k 52 (114)
++|.+++||.++.+|+..++++|.+.+++..|+.+|++.| .+.++..+...
T Consensus 38 ~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~ 89 (98)
T 2crl_A 38 KSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGSGQ 89 (98)
T ss_dssp HTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEESCCCC
T ss_pred HHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEEccCCCCc
Confidence 5789999999999999999999999999999999999999 99998876554
No 4
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=98.19 E-value=2.1e-06 Score=51.54 Aligned_cols=45 Identities=18% Similarity=0.429 Sum_probs=40.9
Q ss_pred ccccCCCCccEEEEecCCCeEEEE--eeCCHHHHHHHHHhcC-CeEEe
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVI--GDIDPVSIVSKLRKLC-HTEIL 46 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~--G~vDp~~lv~~LrK~g-~aeiv 46 (114)
++|.+++||.++.+|+..++++|. +.+++..|+++|++.| .++++
T Consensus 22 ~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~ 69 (69)
T 4a4j_A 22 RAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL 69 (69)
T ss_dssp HHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEEC
T ss_pred HHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEeC
Confidence 468899999999999999999999 7799999999999999 77764
No 5
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=98.00 E-value=8.8e-06 Score=49.46 Aligned_cols=47 Identities=19% Similarity=0.280 Sum_probs=41.9
Q ss_pred ccccCCCCccEEEEecCCCeEEEEee---CCHHHHHHHHHhcC-CeEEeec
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGD---IDPVSIVSKLRKLC-HTEILSV 48 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~aeivsv 48 (114)
++|.+++||.++.+|+..++++|..+ +++..|+.+|++.| .+++++-
T Consensus 22 ~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 72 (74)
T 3dxs_X 22 AALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILAE 72 (74)
T ss_dssp HHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEccC
Confidence 46889999999999999999999753 79999999999999 8988763
No 6
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=97.96 E-value=7.1e-06 Score=48.49 Aligned_cols=45 Identities=22% Similarity=0.463 Sum_probs=40.3
Q ss_pred ccccCCCCccEEEEecCCCeEEEEeeCCHHHHHHHHHhcC-CeEEe
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGDIDPVSIVSKLRKLC-HTEIL 46 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK~g-~aeiv 46 (114)
++|.+++||.++.+|+..++++|.+.+++..|.+.|++.| .+..+
T Consensus 20 ~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~ 65 (66)
T 2roe_A 20 KALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEVL 65 (66)
T ss_dssp HHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTCEEEEC
T ss_pred HHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCCCcEec
Confidence 4688999999999999999999988899999999999999 66544
No 7
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=97.88 E-value=1e-05 Score=46.62 Aligned_cols=42 Identities=14% Similarity=0.264 Sum_probs=38.1
Q ss_pred ccccCCCCccEEEEecCCCeEEEEeeCCHHHHHHHHHhcC-Ce
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGDIDPVSIVSKLRKLC-HT 43 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK~g-~a 43 (114)
++|.+++||.++.+|+..++++|.+.+++..|.+.|++.| .+
T Consensus 21 ~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~~~ 63 (64)
T 2xmm_A 21 KAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGYEV 63 (64)
T ss_dssp HHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHHHTTCCC
T ss_pred HHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence 4678899999999999999999999999999999999988 54
No 8
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=97.75 E-value=1.5e-05 Score=48.91 Aligned_cols=45 Identities=16% Similarity=0.194 Sum_probs=40.8
Q ss_pred ccccCCCCccEEEEecCCCeEEEEeeCCHHHHHHHHHhcC-CeEEeec
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGDIDPVSIVSKLRKLC-HTEILSV 48 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK~g-~aeivsv 48 (114)
++|.+ +||.++.+|+..++++|.++ ++..|+.+|++.| .+.+++.
T Consensus 25 ~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~~~~~~ 70 (73)
T 3fry_A 25 KALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQAKLRSS 70 (73)
T ss_dssp HHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEEEECCS
T ss_pred HHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCceEecCc
Confidence 46788 99999999999999999999 9999999999999 8887763
No 9
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=97.57 E-value=0.00016 Score=41.90 Aligned_cols=44 Identities=23% Similarity=0.449 Sum_probs=38.5
Q ss_pred ccccCCCCccEEEEecCCCeEEEEee---CCHHHHHHHHHhcC-CeEE
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGD---IDPVSIVSKLRKLC-HTEI 45 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~aei 45 (114)
++|.+++||.++.+|+..++++|..+ +++..|...|++.| .+++
T Consensus 20 ~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 67 (68)
T 1cpz_A 20 EAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEV 67 (68)
T ss_dssp HHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred HHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCccc
Confidence 46889999999999999999999864 68889999999999 7765
No 10
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=97.57 E-value=5.7e-05 Score=48.28 Aligned_cols=42 Identities=12% Similarity=0.097 Sum_probs=38.3
Q ss_pred ccccCCCCccEEEEecCCCeEEEEeeCCHHHHHHHHHhcC-Ce
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGDIDPVSIVSKLRKLC-HT 43 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK~g-~a 43 (114)
++|.+++||.++.+|+..++++|.+.+++..|...|++.| .+
T Consensus 42 ~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~Gy~~ 84 (85)
T 2k2p_A 42 GAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTP 84 (85)
T ss_dssp HHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHHHTTCCC
T ss_pred HHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence 4678899999999999999999999999999999999988 43
No 11
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=97.57 E-value=0.00012 Score=55.35 Aligned_cols=50 Identities=20% Similarity=0.469 Sum_probs=45.5
Q ss_pred ccccCCCCccEEEEecCCCeEEEEeeCCHHHHHHHHHhcC-CeEEeecCCC
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGDIDPVSIVSKLRKLC-HTEILSVGPA 51 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK~g-~aeivsv~p~ 51 (114)
++|++++||.++++|+..++++|.+.+++..|+++|++.| .+.++..+..
T Consensus 25 kaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~~~~ 75 (222)
T 1qup_A 25 ACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKP 75 (222)
T ss_dssp HHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEECCSCT
T ss_pred HHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCccccccCCCc
Confidence 5789999999999999999999999999999999999999 8888776544
No 12
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=97.50 E-value=0.00012 Score=43.04 Aligned_cols=46 Identities=20% Similarity=0.262 Sum_probs=40.1
Q ss_pred ccccCCCCccEEEEecCCCeEEEEe--eCCHHHHHHHHHhcC-CeEEee
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIG--DIDPVSIVSKLRKLC-HTEILS 47 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G--~vDp~~lv~~LrK~g-~aeivs 47 (114)
++|.+++||.++.+|+..++++|.. .+++..|...|++.| .+.+++
T Consensus 22 ~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~ 70 (72)
T 1fvq_A 22 TQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR 70 (72)
T ss_dssp HHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEE
T ss_pred HHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEcc
Confidence 4688999999999999999999985 477889999999999 887764
No 13
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=97.49 E-value=0.00018 Score=42.17 Aligned_cols=44 Identities=20% Similarity=0.302 Sum_probs=38.3
Q ss_pred ccccCCCCccEEEEecCCCeEEEEee---CCHHHHHHHHHhcC-CeEE
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGD---IDPVSIVSKLRKLC-HTEI 45 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~aei 45 (114)
++|.+++||.++.+|+..++++|..+ ++...|...|++.| .+.+
T Consensus 23 ~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 70 (72)
T 1aw0_A 23 GVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATL 70 (72)
T ss_dssp HHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEE
T ss_pred HHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEe
Confidence 46889999999999999999999865 67889999999999 6654
No 14
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=97.48 E-value=0.00023 Score=41.50 Aligned_cols=44 Identities=14% Similarity=0.311 Sum_probs=37.2
Q ss_pred ccccCCCCccEEEEecCCCeEEEEee--CCHHHHHHHHHhcC-CeEE
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGD--IDPVSIVSKLRKLC-HTEI 45 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~--vDp~~lv~~LrK~g-~aei 45 (114)
++|.+++||.++.+|+..++++|..+ +++..|...|++.| .+.+
T Consensus 23 ~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~ 69 (71)
T 2xmw_A 23 RAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARV 69 (71)
T ss_dssp HHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEEEE
T ss_pred HHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCcee
Confidence 46889999999999999999999754 78889999999999 6654
No 15
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=97.47 E-value=0.00026 Score=41.45 Aligned_cols=44 Identities=14% Similarity=0.243 Sum_probs=38.3
Q ss_pred ccccCCCCccEEEEecCCCeEEEEee---CCHHHHHHHHHhcC-CeEE
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGD---IDPVSIVSKLRKLC-HTEI 45 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~aei 45 (114)
++|.+++||.++.+|+..++++|..+ ++...|...|++.| .+.+
T Consensus 23 ~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 70 (72)
T 1osd_A 23 KAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSV 70 (72)
T ss_dssp HHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEE
T ss_pred HHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence 46889999999999999999999864 68889999999999 7654
No 16
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=97.45 E-value=0.00021 Score=55.11 Aligned_cols=50 Identities=20% Similarity=0.469 Sum_probs=45.8
Q ss_pred ccccCCCCccEEEEecCCCeEEEEeeCCHHHHHHHHHhcC-CeEEeecCCC
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGDIDPVSIVSKLRKLC-HTEILSVGPA 51 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK~g-~aeivsv~p~ 51 (114)
++|.+++||.++++|+..++++|.+.+++..|+++|++.| .+.++..+..
T Consensus 26 kaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~~~~ 76 (249)
T 1jk9_B 26 ACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKP 76 (249)
T ss_dssp HHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCCEEEEESST
T ss_pred HHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCcccccCCcc
Confidence 5789999999999999999999999999999999999999 8988877654
No 17
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=97.41 E-value=0.00018 Score=42.24 Aligned_cols=42 Identities=19% Similarity=0.284 Sum_probs=36.4
Q ss_pred ccccCCCCccEEEEecCCCeEEEEe---eCCHHHHHHHHHhcC-Ce
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIG---DIDPVSIVSKLRKLC-HT 43 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G---~vDp~~lv~~LrK~g-~a 43 (114)
++|.+++||.++.+|+..++++|.. .+++..|...|++.| .+
T Consensus 25 ~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 70 (71)
T 2l3m_A 25 SSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV 70 (71)
T ss_dssp HHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred HHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 4688999999999999999999974 478899999999988 54
No 18
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=97.37 E-value=0.0005 Score=40.88 Aligned_cols=47 Identities=21% Similarity=0.413 Sum_probs=40.4
Q ss_pred ccccCCCCccEEEEecCCCeEEEEee---CCHHHHHHHHHhcC-CeEEeec
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGD---IDPVSIVSKLRKLC-HTEILSV 48 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~aeivsv 48 (114)
++|.+++||.++.+|+..++++|..+ +++..|...|++.| .+.+...
T Consensus 22 ~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 72 (75)
T 3cjk_B 22 QQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHNI 72 (75)
T ss_dssp HHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEeecC
Confidence 46889999999999999999999754 67889999999999 8876653
No 19
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=97.28 E-value=0.00028 Score=41.66 Aligned_cols=46 Identities=17% Similarity=0.305 Sum_probs=38.4
Q ss_pred ccccCCCCccEEEEecCCCeEEEEee---CCHHHHHHHHHhcC-CeEEee
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGD---IDPVSIVSKLRKLC-HTEILS 47 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~aeivs 47 (114)
++|.+++||.++.+|+..++++|..+ +++..|...|+..| .+.+..
T Consensus 24 ~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 73 (75)
T 1yjr_A 24 SSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSLVK 73 (75)
T ss_dssp HHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEESS
T ss_pred HHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCceeec
Confidence 46889999999999999999999865 56778899999988 766543
No 20
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=97.27 E-value=0.00029 Score=47.62 Aligned_cols=47 Identities=15% Similarity=0.232 Sum_probs=41.1
Q ss_pred ccccCCCCccEEEEecCCCeEEEE---eeCCHHHHHHHHHhcC-CeEEeec
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVI---GDIDPVSIVSKLRKLC-HTEILSV 48 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~---G~vDp~~lv~~LrK~g-~aeivsv 48 (114)
++|.+++||.++.+|+..++++|. +.+++..|+..|++.| .+.+++.
T Consensus 94 ~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 144 (151)
T 1p6t_A 94 KRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGE 144 (151)
T ss_dssp HHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCS
T ss_pred HHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcCc
Confidence 468899999999999999999998 4578999999999999 8876554
No 21
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=97.25 E-value=0.00034 Score=42.16 Aligned_cols=47 Identities=21% Similarity=0.379 Sum_probs=40.0
Q ss_pred ccccCCCCccEEEEecCCCeEEEEee---CCHHHHHHHHHhcC-CeEEeec
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGD---IDPVSIVSKLRKLC-HTEILSV 48 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~aeivsv 48 (114)
++|.+++||.++.+|+..++++|..+ +++..|...|++.| .+.+.++
T Consensus 28 ~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 78 (79)
T 1kvi_A 28 QQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHNP 78 (79)
T ss_dssp HHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEECCC
T ss_pred HHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEecCC
Confidence 46788999999999999999999754 67889999999999 8776543
No 22
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=97.24 E-value=0.0005 Score=42.51 Aligned_cols=46 Identities=13% Similarity=0.271 Sum_probs=39.7
Q ss_pred ccccCCCCccEEEEecCCCeEEEEee---CCHHHHHHHHHhcC-CeEEee
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGD---IDPVSIVSKLRKLC-HTEILS 47 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~aeivs 47 (114)
++|.+++||.++.+|+..++++|..+ +++..|...|+..| .+.+++
T Consensus 29 ~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 78 (84)
T 1q8l_A 29 GKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKK 78 (84)
T ss_dssp HHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSC
T ss_pred HHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecC
Confidence 46889999999999999999999864 68889999999999 776554
No 23
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=97.24 E-value=0.00033 Score=44.52 Aligned_cols=47 Identities=23% Similarity=0.323 Sum_probs=39.8
Q ss_pred ccccCCCCccEEEEecCCCeEEEEe---eCCHHHHHHHHHhc---C-CeEEeec
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIG---DIDPVSIVSKLRKL---C-HTEILSV 48 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G---~vDp~~lv~~LrK~---g-~aeivsv 48 (114)
++|.+++||.++.+|+..++++|.. .+++..|..+|++. | .+.+++.
T Consensus 23 ~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~ 76 (90)
T 2g9o_A 23 STLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSE 76 (90)
T ss_dssp HHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCC
T ss_pred HHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCC
Confidence 4688999999999999999999974 46889999999999 5 6765554
No 24
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=97.23 E-value=0.0006 Score=39.07 Aligned_cols=40 Identities=25% Similarity=0.215 Sum_probs=35.3
Q ss_pred ccccCCCCccEEEEecCCCeEEEEee--CCHHHHHHHHHhcC
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGD--IDPVSIVSKLRKLC 41 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~--vDp~~lv~~LrK~g 41 (114)
++|.+++||.++.+|+..++++|..+ .++..|.+.|++.|
T Consensus 21 ~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G 62 (66)
T 1yg0_A 21 KFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAG 62 (66)
T ss_dssp HHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHT
T ss_pred HHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcC
Confidence 46889999999999999999999854 57888999999888
No 25
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=97.23 E-value=0.00035 Score=40.78 Aligned_cols=44 Identities=11% Similarity=0.185 Sum_probs=37.7
Q ss_pred ccccCCCCccEEEEecCCCeEEEEee--CCHHHHHHHHHhcC-CeEE
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGD--IDPVSIVSKLRKLC-HTEI 45 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~--vDp~~lv~~LrK~g-~aei 45 (114)
++|.+++||.++.+|+..++++|..+ +++..|...|++.| .+.+
T Consensus 20 ~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~ 66 (69)
T 2kt2_A 20 EALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKATL 66 (69)
T ss_dssp HHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEEEC
T ss_pred HHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCceEe
Confidence 46788999999999999999999754 68889999999999 6653
No 26
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=97.19 E-value=0.00046 Score=39.31 Aligned_cols=40 Identities=18% Similarity=0.304 Sum_probs=35.1
Q ss_pred ccccCCCCccEEEEecCCCeEEEEe---eCCHHHHHHHHHhcC
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIG---DIDPVSIVSKLRKLC 41 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G---~vDp~~lv~~LrK~g 41 (114)
++|.+++||.++.+|+..++++|.. .+++..|...|+..|
T Consensus 22 ~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G 64 (69)
T 2qif_A 22 TSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQG 64 (69)
T ss_dssp HHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTT
T ss_pred HHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcC
Confidence 4678999999999999999999974 368889999999888
No 27
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=97.09 E-value=0.00048 Score=46.16 Aligned_cols=44 Identities=20% Similarity=0.345 Sum_probs=38.5
Q ss_pred ccccCCCCccEEEEecCCCeEEEEee---CCHHHHHHHHHhcC-CeEE
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGD---IDPVSIVSKLRKLC-HTEI 45 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~aei 45 (114)
++|.+++||.++.+|+..++++|..+ +++..|++.|++.| .+.+
T Consensus 100 ~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 147 (149)
T 2ew9_A 100 SKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASL 147 (149)
T ss_dssp HHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEEC
T ss_pred HHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEe
Confidence 46789999999999999999999854 68899999999999 7654
No 28
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=97.07 E-value=0.00025 Score=41.82 Aligned_cols=41 Identities=29% Similarity=0.386 Sum_probs=35.6
Q ss_pred ccccCCCCccEEEEecCCCeEEEEeeCCHHHHHHHHHhcC-CeE
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGDIDPVSIVSKLRKLC-HTE 44 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK~g-~ae 44 (114)
++|.++ ||.++.+|+..++++|.++.+ ..|...|++.| .+.
T Consensus 21 ~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~Gy~~~ 62 (67)
T 2kyz_A 21 KALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLEEIDYPVE 62 (67)
T ss_dssp HHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTTCCCC
T ss_pred HHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcCCcee
Confidence 467889 999999999999999998766 88999999988 654
No 29
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=97.01 E-value=0.00072 Score=40.57 Aligned_cols=46 Identities=22% Similarity=0.298 Sum_probs=39.5
Q ss_pred ccccCCCCccEEEEecCCCeEEEEee---CCHHHHHHHHHhcC-CeEEee
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGD---IDPVSIVSKLRKLC-HTEILS 47 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~aeivs 47 (114)
++|.+++||.++.+|+..++++|..+ +++..|...|+..| .+.++.
T Consensus 23 ~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 72 (77)
T 1y3j_A 23 RNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIE 72 (77)
T ss_dssp HHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEES
T ss_pred HHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEECC
Confidence 46889999999999999999999754 67889999999999 777653
No 30
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=96.99 E-value=0.0013 Score=37.79 Aligned_cols=42 Identities=21% Similarity=0.359 Sum_probs=36.2
Q ss_pred ccccCCCCccEEEEecCCCeEEEEe---eCCHHHHHHHHHhcC-Ce
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIG---DIDPVSIVSKLRKLC-HT 43 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G---~vDp~~lv~~LrK~g-~a 43 (114)
++|.+++||.++.+|+..++++|.. .++...|...|+..| .+
T Consensus 23 ~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 68 (71)
T 2ldi_A 23 RALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTL 68 (71)
T ss_dssp TGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEE
T ss_pred HHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 5788999999999999999999974 367788999999888 54
No 31
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=96.96 E-value=0.00063 Score=39.93 Aligned_cols=44 Identities=25% Similarity=0.423 Sum_probs=37.3
Q ss_pred ccccCCCCccEEEEecCCCeEEEEe---eCCHHHHHHHHHhcC-CeEE
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIG---DIDPVSIVSKLRKLC-HTEI 45 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G---~vDp~~lv~~LrK~g-~aei 45 (114)
++|.+++||.++.+|+..++++|.- .+++..|...|+..| .+.+
T Consensus 26 ~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 73 (76)
T 1opz_A 26 KGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVI 73 (76)
T ss_dssp HHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEC
T ss_pred HHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceec
Confidence 4678899999999999999999973 468889999999998 6553
No 32
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=96.88 E-value=0.0019 Score=38.31 Aligned_cols=43 Identities=28% Similarity=0.295 Sum_probs=35.7
Q ss_pred ccccCCCCccEEEEecCCCeEEEEeeC-CHHHHHHHHHhcC-CeE
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGDI-DPVSIVSKLRKLC-HTE 44 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~v-Dp~~lv~~LrK~g-~ae 44 (114)
++|.+++||.++.+|+..++++|..+. ....|...|+..| .+.
T Consensus 23 ~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~~~ 67 (73)
T 1mwy_A 23 NAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLR 67 (73)
T ss_dssp HHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCEEE
T ss_pred HHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCccc
Confidence 468899999999999999999998653 3667888899888 654
No 33
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=96.77 E-value=0.0026 Score=40.26 Aligned_cols=48 Identities=23% Similarity=0.388 Sum_probs=40.4
Q ss_pred ccccCCCCccEEEEecCCCeEEEEee---CCHHHHHHHHHhcC-CeEEeecC
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGD---IDPVSIVSKLRKLC-HTEILSVG 49 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~aeivsv~ 49 (114)
++|.+++||.++.+|+..+.++|..+ +++..|...|+..| .+.+...+
T Consensus 36 ~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 87 (95)
T 2kkh_A 36 NILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRVNG 87 (95)
T ss_dssp HHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCCC
T ss_pred HHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEecCC
Confidence 36788999999999999999999864 57889999999999 77765543
No 34
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=96.62 E-value=0.0028 Score=45.46 Aligned_cols=47 Identities=26% Similarity=0.387 Sum_probs=39.9
Q ss_pred ccccCCCCccEEEEecCCCeEEEEe---eCCHHHHHHHHHhcC-CeEEeec
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIG---DIDPVSIVSKLRKLC-HTEILSV 48 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G---~vDp~~lv~~LrK~g-~aeivsv 48 (114)
++|.+++||.++.+|+..++++|.. .+++..|+..|++.| .+.++..
T Consensus 142 ~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 192 (202)
T 2rop_A 142 GMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVSE 192 (202)
T ss_dssp HHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC--
T ss_pred HHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcCC
Confidence 4688999999999999999999974 368899999999999 8877654
No 35
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=96.45 E-value=0.0052 Score=40.49 Aligned_cols=44 Identities=23% Similarity=0.329 Sum_probs=37.9
Q ss_pred ccccCCCCccEEEEecCCCeEEEEee---CCHHHHHHHHHhcC-CeEE
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGD---IDPVSIVSKLRKLC-HTEI 45 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~g-~aei 45 (114)
++|.+++||.++.+|+..++++|..+ ++...|...|+..| .+..
T Consensus 28 ~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~~~Gy~~~~ 75 (111)
T 2ofg_X 28 GSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLAE 75 (111)
T ss_dssp HHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHHTTTCCEEC
T ss_pred HHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHHHcCCeeee
Confidence 46889999999999999999999854 67889999999999 6653
No 36
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=96.42 E-value=0.0023 Score=38.13 Aligned_cols=46 Identities=15% Similarity=0.229 Sum_probs=38.8
Q ss_pred ccccCCCCccEEEEecCCCeEEEEe---eCCHHHHHHHHHhcC-CeEEee
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIG---DIDPVSIVSKLRKLC-HTEILS 47 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G---~vDp~~lv~~LrK~g-~aeivs 47 (114)
++|.+++||.++.+|+..++++|.. .++...|...|++.| .+.+..
T Consensus 23 ~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 72 (80)
T 1jww_A 23 KRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKG 72 (80)
T ss_dssp HHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECC
T ss_pred HHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecC
Confidence 4678999999999999999999974 367889999999999 776543
No 37
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=95.96 E-value=0.0064 Score=35.76 Aligned_cols=36 Identities=19% Similarity=0.430 Sum_probs=30.2
Q ss_pred ccccCCCCccEEEEecCCCeEEEEeeCCHHHHHHHHHhcC
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGDIDPVSIVSKLRKLC 41 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK~g 41 (114)
++|.+++||.++.+|+..++++|.++.+ ...|++.|
T Consensus 23 ~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~~~G 58 (71)
T 2aj0_A 23 RNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVEQAG 58 (71)
T ss_dssp HHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHHHHH
T ss_pred HHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHHHhC
Confidence 4678899999999999999999998775 44667777
No 38
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=95.10 E-value=0.029 Score=37.23 Aligned_cols=45 Identities=20% Similarity=0.296 Sum_probs=38.2
Q ss_pred ccccCCCCccEEEEecCCCeEEEEe---eCCHHHHHHHHHhcC-CeEEe
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIG---DIDPVSIVSKLRKLC-HTEIL 46 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G---~vDp~~lv~~LrK~g-~aeiv 46 (114)
++|.+++||.++.+|+..++++|.. .+++..|...|+..| .+.++
T Consensus 24 ~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 72 (149)
T 2ew9_A 24 RNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVM 72 (149)
T ss_dssp HHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred HHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEee
Confidence 4678899999999999999999975 367889999999999 77654
No 39
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=93.36 E-value=0.064 Score=36.56 Aligned_cols=40 Identities=25% Similarity=0.471 Sum_probs=32.2
Q ss_pred ccccCCCCccEEEE-----ecCCC--eEEEEee-CCHHHHHHHHHhcC
Q 033646 2 KTVSGLAGVDSISM-----DMKEK--KLTVIGD-IDPVSIVSKLRKLC 41 (114)
Q Consensus 2 Kal~~l~GV~sV~v-----D~~~~--kvtV~G~-vDp~~lv~~LrK~g 41 (114)
++|++++||+.|.+ |.... ++||.|+ +|-..|.+.|++.|
T Consensus 26 ~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~G 73 (100)
T 3bpd_A 26 LKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMG 73 (100)
T ss_dssp HHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTT
T ss_pred HHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcC
Confidence 36788999988754 55544 7788897 99999999999987
No 40
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=92.78 E-value=0.1 Score=35.44 Aligned_cols=40 Identities=28% Similarity=0.470 Sum_probs=31.9
Q ss_pred ccccCCCCccEEE-----EecCCC--eEEEEee-CCHHHHHHHHHhcC
Q 033646 2 KTVSGLAGVDSIS-----MDMKEK--KLTVIGD-IDPVSIVSKLRKLC 41 (114)
Q Consensus 2 Kal~~l~GV~sV~-----vD~~~~--kvtV~G~-vDp~~lv~~LrK~g 41 (114)
++|++++||+.|. +|.... ++||.|+ +|-..|.+.|++.|
T Consensus 26 ~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~G 73 (97)
T 2raq_A 26 KYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYG 73 (97)
T ss_dssp HHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTT
T ss_pred HHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcC
Confidence 3577888888764 465554 7788897 99999999999988
No 41
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=92.71 E-value=0.1 Score=35.38 Aligned_cols=40 Identities=20% Similarity=0.356 Sum_probs=32.2
Q ss_pred ccccCCCCccEEEE-----ecCCC--eEEEEee-CCHHHHHHHHHhcC
Q 033646 2 KTVSGLAGVDSISM-----DMKEK--KLTVIGD-IDPVSIVSKLRKLC 41 (114)
Q Consensus 2 Kal~~l~GV~sV~v-----D~~~~--kvtV~G~-vDp~~lv~~LrK~g 41 (114)
++|++++||+.|.+ |.... ++||.|+ +|-..+.++|++.|
T Consensus 25 ~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~G 72 (96)
T 2x3d_A 25 ERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEG 72 (96)
T ss_dssp HHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTT
T ss_pred HHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcC
Confidence 36788999988754 55543 7788897 99999999999988
No 42
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=92.61 E-value=0.15 Score=36.22 Aligned_cols=39 Identities=28% Similarity=0.470 Sum_probs=34.3
Q ss_pred ccccCCCCccEEEEecCCCeEEEEee---CCHHHHHHHHHhc
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGD---IDPVSIVSKLRKL 40 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~---vDp~~lv~~LrK~ 40 (114)
++|.+++||.++.+|+..++++|..+ +++..|...|+..
T Consensus 40 ~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~ 81 (202)
T 2rop_A 40 ENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEAL 81 (202)
T ss_dssp HHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTS
T ss_pred HHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHh
Confidence 46889999999999999999999754 6788899999887
No 43
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=91.52 E-value=0.18 Score=33.52 Aligned_cols=40 Identities=23% Similarity=0.398 Sum_probs=34.0
Q ss_pred ccccCCCCccEEEEecCCCeEEEEe---eCCHHHHHHHHHhcC
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIG---DIDPVSIVSKLRKLC 41 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G---~vDp~~lv~~LrK~g 41 (114)
++|.+++||.++.+++..++++|.. .+++..+...|+..|
T Consensus 26 ~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G 68 (151)
T 1p6t_A 26 KGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLG 68 (151)
T ss_dssp HHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHT
T ss_pred HHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcC
Confidence 3678899999999999999999874 367888989898877
No 44
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=89.76 E-value=0.28 Score=42.34 Aligned_cols=43 Identities=19% Similarity=0.244 Sum_probs=37.8
Q ss_pred ccccCCCCccEEEEecCCCeEEEEe---eCCHHHHHHHHHhcC-CeE
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIG---DIDPVSIVSKLRKLC-HTE 44 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G---~vDp~~lv~~LrK~g-~ae 44 (114)
++|.+++||.++.+|+..++++|.- .+++..|.+.|++.| .+.
T Consensus 22 ~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~ 68 (723)
T 3j09_A 22 TAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVV 68 (723)
T ss_dssp HHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEES
T ss_pred HHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCccc
Confidence 4688999999999999999999974 479999999999999 653
No 45
>2cpq_A FragIle X mental retardation syndrome related protein 1, isoform B'; KH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=65.14 E-value=7.9 Score=25.39 Aligned_cols=37 Identities=14% Similarity=0.221 Sum_probs=26.6
Q ss_pred ccccCCCCccEEEEecCCCeEEEEeeCCHHHHHHHHHh
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGDIDPVSIVSKLRK 39 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK 39 (114)
+.+....||.+|++|-.+++|+|.| .|.+.+-.+...
T Consensus 38 k~I~e~tGv~~IdI~eddG~V~I~g-~~~ea~~~A~~~ 74 (91)
T 2cpq_A 38 QQARKVPGVTAIELDEDTGTFRIYG-ESADAVKKARGF 74 (91)
T ss_dssp HHHHTSTTEEEEEEETTTTEEEEEE-SSHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEEEcCCCEEEEEE-CCHHHHHHHHHH
Confidence 4566678997799987679999998 456655555443
No 46
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=56.85 E-value=3.2 Score=28.50 Aligned_cols=28 Identities=7% Similarity=0.230 Sum_probs=20.9
Q ss_pred cEEEEecCCCeEEEEeeCCHHHHHHHHH
Q 033646 11 DSISMDMKEKKLTVIGDIDPVSIVSKLR 38 (114)
Q Consensus 11 ~sV~vD~~~~kvtV~G~vDp~~lv~~Lr 38 (114)
..+++...++.||++|.++...-.+.++
T Consensus 77 ~~i~V~V~~g~VtLsG~v~s~~~r~~a~ 104 (132)
T 2kgs_A 77 PDFGLKVERDTVTLTGTAPSSEHKDAVK 104 (132)
T ss_dssp TTCEEEEEETEEEEECEESSHHHHHHHH
T ss_pred CceEEEEECCEEEEEEEECCHHHHHHHH
Confidence 4566777799999999998775555543
No 47
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=54.49 E-value=25 Score=22.86 Aligned_cols=37 Identities=14% Similarity=0.320 Sum_probs=24.5
Q ss_pred ccccCCCCccEEEEecCCCeEEEEee-CCHHHHHHHHH
Q 033646 2 KTVSGLAGVDSISMDMKEKKLTVIGD-IDPVSIVSKLR 38 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~kvtV~G~-vDp~~lv~~Lr 38 (114)
.+|.+++||+--.+|...++++|+=. -+...|.+.|+
T Consensus 24 ~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i~ 61 (95)
T 2jsx_A 24 TQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIE 61 (95)
T ss_dssp HHHTTSTTEEEEEEETTTTEEEEEEEESSHHHHHHHHH
T ss_pred HHHHCCCCeEEEEecCCCCCEEEEEEeCCHHHHHHHHH
Confidence 46889999955456877788888643 44445555444
No 48
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=54.33 E-value=10 Score=23.66 Aligned_cols=26 Identities=12% Similarity=0.256 Sum_probs=20.8
Q ss_pred ccCCCCc--cEEEEecCCCeEEEEeeCC
Q 033646 4 VSGLAGV--DSISMDMKEKKLTVIGDID 29 (114)
Q Consensus 4 l~~l~GV--~sV~vD~~~~kvtV~G~vD 29 (114)
...|+|| +.|+|...++.|+|.|.-.
T Consensus 12 ~~dlPG~~~edi~V~v~~~~L~I~g~~~ 39 (85)
T 3q9p_A 12 SLDVNHFAPDELTVKTKDGVVEITGKHA 39 (85)
T ss_dssp EEECTTTCCSEEEEEEETTEEEEEEEEC
T ss_pred EEECCCCChHHEEEEEECCEEEEEEEEc
Confidence 3467888 5688999999999999844
No 49
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=51.80 E-value=9.2 Score=24.68 Aligned_cols=24 Identities=13% Similarity=0.147 Sum_probs=19.6
Q ss_pred cCCCCc--cEEEEecCCCeEEEEeeC
Q 033646 5 SGLAGV--DSISMDMKEKKLTVIGDI 28 (114)
Q Consensus 5 ~~l~GV--~sV~vD~~~~kvtV~G~v 28 (114)
..|+|+ +.|+|...++.|+|.|.-
T Consensus 17 ~dlPG~~~edI~V~v~~~~L~I~g~~ 42 (101)
T 2wj5_A 17 LDVKHFSPEEISVKVVGDHVEVHARH 42 (101)
T ss_dssp EECTTSCGGGEEEEEETTEEEEEEEE
T ss_pred EECCCCcHHHeEEEEECCEEEEEEEE
Confidence 457888 458888889999999974
No 50
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=50.66 E-value=10 Score=23.87 Aligned_cols=24 Identities=8% Similarity=0.142 Sum_probs=19.3
Q ss_pred cCCCCcc--EEEEecCCCeEEEEeeC
Q 033646 5 SGLAGVD--SISMDMKEKKLTVIGDI 28 (114)
Q Consensus 5 ~~l~GV~--sV~vD~~~~kvtV~G~v 28 (114)
..|+||. .|+|...++.|+|.|.-
T Consensus 12 ~dlPG~~~edi~V~v~~~~L~I~g~~ 37 (90)
T 2y1y_A 12 LDVKHFSPEELKVKVLGDVIEVHGKH 37 (90)
T ss_dssp EECTTSCGGGEEEEEETTEEEEEEEE
T ss_pred EECCCCcHHHeEEEEECCEEEEEEEE
Confidence 4578884 48888889999999974
No 51
>2e9h_A EIF-5, eukaryotic translation initiation factor 5; zinc binding, C4 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.13 E-value=25 Score=25.25 Aligned_cols=27 Identities=19% Similarity=0.293 Sum_probs=23.9
Q ss_pred EEEecCCCeEEEEeeCCHHHHHHHHHh
Q 033646 13 ISMDMKEKKLTVIGDIDPVSIVSKLRK 39 (114)
Q Consensus 13 V~vD~~~~kvtV~G~vDp~~lv~~LrK 39 (114)
-++|.++++++|.|.+++..|-+.|++
T Consensus 72 g~id~~~~rlii~G~~~~~~i~~~L~~ 98 (157)
T 2e9h_A 72 TQFDVKNDRYIVNGSHEANKLQDMLDG 98 (157)
T ss_dssp EEEETTTTEEEEEBCCCHHHHHHHHHH
T ss_pred eeecCCCCEEEEEeeeCHHHHHHHHHH
Confidence 367888999999999999999998875
No 52
>2g2k_A EIF-5, eukaryotic translation initiation factor 5; EIF125 fold; NMR {Homo sapiens}
Probab=41.37 E-value=27 Score=25.38 Aligned_cols=26 Identities=19% Similarity=0.312 Sum_probs=23.0
Q ss_pred EEecCCCeEEEEeeCCHHHHHHHHHh
Q 033646 14 SMDMKEKKLTVIGDIDPVSIVSKLRK 39 (114)
Q Consensus 14 ~vD~~~~kvtV~G~vDp~~lv~~LrK 39 (114)
++|.++++++|.|.+++..|-..|++
T Consensus 66 ~id~~~~rliinG~~~~~~i~~~L~~ 91 (170)
T 2g2k_A 66 QFDVKNDRYIVNGSHEANKLQDMLDG 91 (170)
T ss_dssp EECTTTCCEEEEBCCCHHHHHHHHHH
T ss_pred eecCCCCEEEEEeeeCHHHHHHHHHH
Confidence 67888999999999999999988863
No 53
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=41.04 E-value=17 Score=23.62 Aligned_cols=24 Identities=8% Similarity=0.299 Sum_probs=19.3
Q ss_pred ccCCCCc--cEEEEecCCCeEEEEee
Q 033646 4 VSGLAGV--DSISMDMKEKKLTVIGD 27 (114)
Q Consensus 4 l~~l~GV--~sV~vD~~~~kvtV~G~ 27 (114)
...|+|| +.|+|...++.|+|.|.
T Consensus 17 ~~dlPG~~~edi~V~v~~~~L~I~g~ 42 (106)
T 3l1e_A 17 FLDVKHFSPEDLTVKVQEDFVEIHGK 42 (106)
T ss_dssp EEECTTSCGGGEEEEEETTEEEEEEE
T ss_pred EEECCCCChHHEEEEEECCEEEEEEE
Confidence 3457888 45888889999999996
No 54
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=40.63 E-value=13 Score=23.76 Aligned_cols=25 Identities=28% Similarity=0.469 Sum_probs=19.9
Q ss_pred cCCCCcc--EEEEecCCCeEEEEeeCC
Q 033646 5 SGLAGVD--SISMDMKEKKLTVIGDID 29 (114)
Q Consensus 5 ~~l~GV~--sV~vD~~~~kvtV~G~vD 29 (114)
..|+||. .|+|...++.|+|.|.-.
T Consensus 22 ~~lPG~~~edi~v~~~~~~L~I~g~~~ 48 (102)
T 4fei_A 22 LDVPGVDAGTLALAEDGGQLTVSGERP 48 (102)
T ss_dssp EECTTCCGGGCEEEEETTEEEEEEEEC
T ss_pred EECCCCchHhEEEEEECCEEEEEEEEe
Confidence 4578884 588888899999999853
No 55
>3gzb_A Putative snoal-like polyketide cyclase; YP_001182657.1, STRU genomics, joint center for structural genomics, JCSG; HET: MSE; 1.44A {Shewanella putrefaciens} PDB: 3lza_A*
Probab=39.97 E-value=24 Score=25.26 Aligned_cols=32 Identities=28% Similarity=0.452 Sum_probs=26.4
Q ss_pred CCCCccEEEEecCCCeEEEEee-CCHHHHHHHH
Q 033646 6 GLAGVDSISMDMKEKKLTVIGD-IDPVSIVSKL 37 (114)
Q Consensus 6 ~l~GV~sV~vD~~~~kvtV~G~-vDp~~lv~~L 37 (114)
+++||..+..|+.+.+|+=.-+ +|=..+.+.|
T Consensus 119 aiPGVTtlklDm~~~Rv~eh~DlmDyqTm~DQl 151 (154)
T 3gzb_A 119 AIPAVTSLKLDMLNRRVTEHVDLIDYQTMSDQL 151 (154)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEEECHHHHHHHH
T ss_pred ecCceEEEeecCCccchhhhHhHHhHHHHHHHh
Confidence 5799999999999999988655 7777776655
No 56
>2d74_B Translation initiation factor 2 beta subunit; protein complex; 2.80A {Pyrococcus furiosus} PDB: 2dcu_B*
Probab=39.91 E-value=27 Score=24.77 Aligned_cols=25 Identities=24% Similarity=0.515 Sum_probs=22.0
Q ss_pred EEEecCCCeEEEEeeCCHHHHHHHHHh
Q 033646 13 ISMDMKEKKLTVIGDIDPVSIVSKLRK 39 (114)
Q Consensus 13 V~vD~~~~kvtV~G~vDp~~lv~~LrK 39 (114)
-++| +++++|.|.+++..|-+.|++
T Consensus 75 g~id--~~rlii~G~~~~~~i~~~L~~ 99 (148)
T 2d74_B 75 GTLE--GRRVVLQGRFTPYLIANKLKK 99 (148)
T ss_dssp EEEE--TTEEEESSCCCHHHHHHHHHH
T ss_pred eeec--CCEEEEEeeeCHHHHHHHHHH
Confidence 3667 889999999999999999985
No 57
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=39.87 E-value=14 Score=24.48 Aligned_cols=26 Identities=19% Similarity=0.358 Sum_probs=20.2
Q ss_pred cCCCCc--cEEEEecCC-CeEEEEeeCCH
Q 033646 5 SGLAGV--DSISMDMKE-KKLTVIGDIDP 30 (114)
Q Consensus 5 ~~l~GV--~sV~vD~~~-~kvtV~G~vDp 30 (114)
..|+|| +.|+|...+ +.|+|.|.-..
T Consensus 40 ~~lPG~~~edi~V~v~~~~~L~I~g~~~~ 68 (123)
T 3aab_A 40 ADLAGFNKEKIKARVSGQNELIIEAEREI 68 (123)
T ss_dssp EECCSCCGGGCEEEEETTTEEEEEEECCC
T ss_pred EECCCCCHHHEEEEEeCCCEEEEEEEEec
Confidence 467888 458888888 99999998543
No 58
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=37.82 E-value=22 Score=24.52 Aligned_cols=29 Identities=21% Similarity=0.312 Sum_probs=24.9
Q ss_pred CeEEEEeeCCHHHHHHHHHhc-C-CeEEeec
Q 033646 20 KKLTVIGDIDPVSIVSKLRKL-C-HTEILSV 48 (114)
Q Consensus 20 ~kvtV~G~vDp~~lv~~LrK~-g-~aeivsv 48 (114)
.=+.|+|+-|=..++++||.. | ++.++++
T Consensus 111 ~~vLvSgD~DF~plv~~lr~~~G~~V~v~g~ 141 (165)
T 2qip_A 111 RVILVSGDGDFSLLVERIQQRYNKKVTVYGV 141 (165)
T ss_dssp EEEEECCCGGGHHHHHHHHHHHCCEEEEEEC
T ss_pred EEEEEECChhHHHHHHHHHHHcCcEEEEEeC
Confidence 356678999999999999995 9 8988886
No 59
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=36.49 E-value=17 Score=22.91 Aligned_cols=24 Identities=29% Similarity=0.594 Sum_probs=18.8
Q ss_pred cCCCCcc--EEEEecCCCeEEEEeeC
Q 033646 5 SGLAGVD--SISMDMKEKKLTVIGDI 28 (114)
Q Consensus 5 ~~l~GV~--sV~vD~~~~kvtV~G~v 28 (114)
..|+||. .|+|...++.|+|.|.-
T Consensus 20 ~~lPG~~~edi~v~~~~~~L~I~g~~ 45 (100)
T 3gla_A 20 ADLPGIDPSQIEVQMDKGILSIRGER 45 (100)
T ss_dssp EECTTSCGGGCEEEEETTEEEEEEEE
T ss_pred EECCCCCHHHEEEEEECCEEEEEEEE
Confidence 4577874 48888889999999974
No 60
>3pro_C Alpha-lytic protease; Pro region, foldase, protein folding, serine protease, hydro hydrolase inhibitor complex; HET: AES; 1.80A {Lysobacter enzymogenes} SCOP: d.52.1.1 d.52.1.1 PDB: 2pro_A* 4pro_C
Probab=35.72 E-value=37 Score=24.42 Aligned_cols=35 Identities=23% Similarity=0.098 Sum_probs=25.0
Q ss_pred CCCccEEEEecCCCeEEEEeeC-CHHHHHHHHHhcC
Q 033646 7 LAGVDSISMDMKEKKLTVIGDI-DPVSIVSKLRKLC 41 (114)
Q Consensus 7 l~GV~sV~vD~~~~kvtV~G~v-Dp~~lv~~LrK~g 41 (114)
-.||.+-.||...|+|+|+-+- .+...-..++..|
T Consensus 113 ~~~v~~W~VD~~tN~VVV~a~~~~~~aa~~f~~~AG 148 (166)
T 3pro_C 113 LDGVQSWYVDPRSNAVVVKVDDGATDAGVDFVALSG 148 (166)
T ss_dssp CTTEEEEEEEGGGTEEEEEEETTCHHHHHHHHHHHT
T ss_pred CCCCceEEEeCCCCeEEEEeCCCChHHHHHHHHHhC
Confidence 3678899999999999998762 3444444445666
No 61
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=33.50 E-value=7.9 Score=17.44 Aligned_cols=9 Identities=44% Similarity=1.276 Sum_probs=6.1
Q ss_pred cCCCCeeeC
Q 033646 106 EDPNACVIC 114 (114)
Q Consensus 106 E~pn~C~Ic 114 (114)
|.|+.|.+|
T Consensus 1 ek~~~C~~C 9 (27)
T 2kvh_A 1 EKPFSCSLC 9 (27)
T ss_dssp CCCEECSSS
T ss_pred CcCccCCCc
Confidence 457778776
No 62
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.03 E-value=15 Score=18.85 Aligned_cols=11 Identities=18% Similarity=0.154 Sum_probs=9.5
Q ss_pred cccCCCCeeeC
Q 033646 104 AEEDPNACVIC 114 (114)
Q Consensus 104 ~eE~pn~C~Ic 114 (114)
..+.|+.|.||
T Consensus 36 ~~~~~~~C~~c 46 (46)
T 2ytk_A 36 TGEKPSGPSSG 46 (46)
T ss_dssp SSSSCSSCCCC
T ss_pred CCCCCCCCCCC
Confidence 56889999998
No 63
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=31.81 E-value=32 Score=23.70 Aligned_cols=24 Identities=25% Similarity=0.509 Sum_probs=18.5
Q ss_pred cCCCCcc--EEEEec-CCCeEEEEeeC
Q 033646 5 SGLAGVD--SISMDM-KEKKLTVIGDI 28 (114)
Q Consensus 5 ~~l~GV~--sV~vD~-~~~kvtV~G~v 28 (114)
..|+||. .|+|.. .++.|+|.|.-
T Consensus 59 ~dlPGv~kedI~V~v~~~~~L~I~g~~ 85 (151)
T 1gme_A 59 ADLPGVKKEEVKVEVEDGNVLVVSGER 85 (151)
T ss_dssp EECTTCCGGGEEEEEETTTEEEEEECC
T ss_pred EECCCCChHHEEEEEecCCEEEEEEEE
Confidence 4678884 588888 56899999964
No 64
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=30.89 E-value=11 Score=18.06 Aligned_cols=11 Identities=36% Similarity=0.933 Sum_probs=8.3
Q ss_pred cccCCCCeeeC
Q 033646 104 AEEDPNACVIC 114 (114)
Q Consensus 104 ~eE~pn~C~Ic 114 (114)
..+.|+.|.+|
T Consensus 3 ~~~k~~~C~~C 13 (35)
T 1srk_A 3 SGKRPFVCRIC 13 (35)
T ss_dssp SCCSCEECSSS
T ss_pred CCCcCeeCCCC
Confidence 35778888887
No 65
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=29.71 E-value=31 Score=23.82 Aligned_cols=25 Identities=20% Similarity=0.300 Sum_probs=19.1
Q ss_pred cCCCCcc--EEEEecCCCeEEEEeeCC
Q 033646 5 SGLAGVD--SISMDMKEKKLTVIGDID 29 (114)
Q Consensus 5 ~~l~GV~--sV~vD~~~~kvtV~G~vD 29 (114)
..|+||. .|+|...++.|+|.|.-.
T Consensus 72 ~dlPG~~~edi~V~~~~~~L~I~g~~~ 98 (161)
T 4eld_A 72 AWLPGVNKEDIILNAVGDTLEIRAKRS 98 (161)
T ss_dssp EECTTCCGGGEEEEEETTEEEEEEECC
T ss_pred EECCCCChHhEEEEEECCEEEEEEEEc
Confidence 4577874 488888889999998743
No 66
>2hh2_A KH-type splicing regulatory protein; KH-RNA binding domain, RNA binding protein; NMR {Homo sapiens}
Probab=28.91 E-value=28 Score=22.67 Aligned_cols=33 Identities=15% Similarity=0.267 Sum_probs=20.0
Q ss_pred cccCCCCccEEEEecCC--------CeEEEEeeCCHHHHHHHHH
Q 033646 3 TVSGLAGVDSISMDMKE--------KKLTVIGDIDPVSIVSKLR 38 (114)
Q Consensus 3 al~~l~GV~sV~vD~~~--------~kvtV~G~vDp~~lv~~Lr 38 (114)
.|....|+ +|.++-.. ..|+|+|+ ++.+..+++
T Consensus 31 ~I~~~TGa-~I~I~~~~~~~~~~~~r~V~I~G~--~e~v~~A~~ 71 (107)
T 2hh2_A 31 AINQQTGA-FVEISRQLPPNGDPNFKLFIIRGS--PQQIDHAKQ 71 (107)
T ss_dssp HHHHHSSS-EEEECCCCCTTCCTTEEEEEEESC--HHHHHHHHH
T ss_pred HHHHHhCC-EEEEcCccCCCCCCCceEEEEECC--HHHHHHHHH
Confidence 34455676 57776542 58899994 455444443
No 67
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.73 E-value=20 Score=18.34 Aligned_cols=12 Identities=17% Similarity=0.135 Sum_probs=10.0
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...+.|+.|.||
T Consensus 35 H~~~k~~~C~~C 46 (46)
T 2ytn_A 35 HTGEKPSGPSSG 46 (46)
T ss_dssp TSCCCCCSCCCC
T ss_pred cCCCCCCCCCCC
Confidence 457889999998
No 68
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.15 E-value=19 Score=18.42 Aligned_cols=12 Identities=17% Similarity=0.135 Sum_probs=9.9
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...|.|+.|.||
T Consensus 35 H~~~k~~~C~~c 46 (46)
T 2eq0_A 35 HTGEKPSGPSSG 46 (46)
T ss_dssp TCCCCCSCCSCC
T ss_pred cCCCCCCCCCCC
Confidence 356889999998
No 69
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.94 E-value=20 Score=18.35 Aligned_cols=12 Identities=17% Similarity=0.135 Sum_probs=10.0
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...+.|+.|.||
T Consensus 35 H~~~k~~~C~~c 46 (46)
T 2emf_A 35 HTGEKPSGPSSG 46 (46)
T ss_dssp TSCSSCSCCCCC
T ss_pred hCCCCCCCCCCC
Confidence 457889999998
No 70
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.61 E-value=12 Score=17.94 Aligned_cols=11 Identities=27% Similarity=0.791 Sum_probs=8.4
Q ss_pred cccCCCCeeeC
Q 033646 104 AEEDPNACVIC 114 (114)
Q Consensus 104 ~eE~pn~C~Ic 114 (114)
..+.|+.|.+|
T Consensus 5 ~~~k~~~C~~C 15 (36)
T 2elt_A 5 SSGKPYKCPQC 15 (36)
T ss_dssp CCCCSEECSSS
T ss_pred CCCCCCCCCCC
Confidence 45778888887
No 71
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.94 E-value=16 Score=17.57 Aligned_cols=11 Identities=18% Similarity=0.745 Sum_probs=8.8
Q ss_pred cccCCCCeeeC
Q 033646 104 AEEDPNACVIC 114 (114)
Q Consensus 104 ~eE~pn~C~Ic 114 (114)
..+.|+.|.+|
T Consensus 5 ~~~k~~~C~~C 15 (37)
T 2elo_A 5 SSGRSYSCPVC 15 (37)
T ss_dssp CCCCCCEETTT
T ss_pred CCCCCcCCCCC
Confidence 46788999887
No 72
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C
Probab=26.91 E-value=47 Score=25.41 Aligned_cols=21 Identities=14% Similarity=0.374 Sum_probs=18.2
Q ss_pred CeEEEEeeCCHHHHHHHHHhc
Q 033646 20 KKLTVIGDIDPVSIVSKLRKL 40 (114)
Q Consensus 20 ~kvtV~G~vDp~~lv~~LrK~ 40 (114)
-.++|.|++|+..|+..|++.
T Consensus 190 ~~l~vvGd~d~~~~~~~v~~~ 210 (445)
T 3ami_A 190 ATVVVVGDVEHEAVFRLAEQT 210 (445)
T ss_dssp EEEEEEESCCHHHHHHHHHHT
T ss_pred eEEEEEcCCCHHHHHHHHHHH
Confidence 367889999999999999874
No 73
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.52 E-value=19 Score=17.09 Aligned_cols=11 Identities=18% Similarity=0.718 Sum_probs=8.3
Q ss_pred cccCCCCeeeC
Q 033646 104 AEEDPNACVIC 114 (114)
Q Consensus 104 ~eE~pn~C~Ic 114 (114)
..+.|+.|.+|
T Consensus 5 ~~~~~~~C~~C 15 (36)
T 2elr_A 5 SSGKTHLCDMC 15 (36)
T ss_dssp CCCSSCBCTTT
T ss_pred CCCCCeecCcC
Confidence 45778888887
No 74
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=26.23 E-value=14 Score=17.47 Aligned_cols=10 Identities=20% Similarity=0.763 Sum_probs=7.6
Q ss_pred ccCCCCeeeC
Q 033646 105 EEDPNACVIC 114 (114)
Q Consensus 105 eE~pn~C~Ic 114 (114)
.+.|+.|.+|
T Consensus 4 ~~k~~~C~~C 13 (35)
T 2elx_A 4 GSSGYVCALC 13 (35)
T ss_dssp CCCSEECSSS
T ss_pred CCCCeECCCC
Confidence 5678888887
No 75
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=26.08 E-value=22 Score=18.11 Aligned_cols=12 Identities=17% Similarity=0.135 Sum_probs=9.9
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...+.|+.|.||
T Consensus 35 H~~~k~~~C~~c 46 (46)
T 2ema_A 35 HTGEKPSGPSSG 46 (46)
T ss_dssp GGCCCCCSSSCC
T ss_pred cCCCCCCCCCCC
Confidence 357889999998
No 76
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.63 E-value=19 Score=17.90 Aligned_cols=11 Identities=36% Similarity=0.972 Sum_probs=8.8
Q ss_pred cccCCCCeeeC
Q 033646 104 AEEDPNACVIC 114 (114)
Q Consensus 104 ~eE~pn~C~Ic 114 (114)
..+.|+.|.+|
T Consensus 6 ~~~k~~~C~~C 16 (42)
T 2yte_A 6 SGEKPYSCAEC 16 (42)
T ss_dssp CSCCSCBCTTT
T ss_pred CCCCCeECCCC
Confidence 46788999887
No 77
>2k1h_A Uncharacterized protein Ser13; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Staphylococcus epidermidis}
Probab=25.44 E-value=84 Score=20.44 Aligned_cols=35 Identities=11% Similarity=0.151 Sum_probs=26.4
Q ss_pred cccCCCCccEEEEecCCCeEEEEe--eCCHHHHHHHHHh
Q 033646 3 TVSGLAGVDSISMDMKEKKLTVIG--DIDPVSIVSKLRK 39 (114)
Q Consensus 3 al~~l~GV~sV~vD~~~~kvtV~G--~vDp~~lv~~LrK 39 (114)
+|-+++||.+|-.. .+-+||+- ++|=..|.-.|+.
T Consensus 44 ~LF~i~gVk~Vf~g--~dFITVtK~~~~dW~~ikp~I~~ 80 (94)
T 2k1h_A 44 RLFEIEGVKSIFYV--LDFISIDKEDNANWNELLPQIEN 80 (94)
T ss_dssp HHHTSTTEEEEEEE--TTEEEEEECTTCCHHHHHHHHHH
T ss_pred HhhCCCCeeEEEEe--CCEEEEecCCCCCHHHHHHHHHH
Confidence 46689999999887 56899974 4777777766653
No 78
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=25.16 E-value=94 Score=17.35 Aligned_cols=30 Identities=13% Similarity=0.291 Sum_probs=21.2
Q ss_pred CCCccEEEEecCCCeEEEEeeCCHHHHHHHHHh
Q 033646 7 LAGVDSISMDMKEKKLTVIGDIDPVSIVSKLRK 39 (114)
Q Consensus 7 l~GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK 39 (114)
+.|+=++-+ ++++...|..+...|.+.|++
T Consensus 53 v~~~Pt~~~---~G~~~~~G~~~~~~l~~~l~~ 82 (85)
T 1nho_A 53 LMAVPAIAI---NGVVRFVGAPSREELFEAIND 82 (85)
T ss_dssp SSCSSEEEE---TTTEEEECSSCCHHHHHHHHH
T ss_pred ceeeCEEEE---CCEEEEccCCCHHHHHHHHHH
Confidence 445556666 445577888899999888875
No 79
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.12 E-value=24 Score=17.93 Aligned_cols=12 Identities=8% Similarity=-0.017 Sum_probs=9.8
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...+.|+.|.+|
T Consensus 35 H~~~~~~~C~~C 46 (46)
T 2eoe_A 35 HTGVKPSGPSSG 46 (46)
T ss_dssp GSCCCSCSSCCC
T ss_pred cCCCCCCCCCCC
Confidence 357889999998
No 80
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.03 E-value=14 Score=17.77 Aligned_cols=11 Identities=27% Similarity=0.906 Sum_probs=8.4
Q ss_pred cccCCCCeeeC
Q 033646 104 AEEDPNACVIC 114 (114)
Q Consensus 104 ~eE~pn~C~Ic 114 (114)
..+.|+.|.+|
T Consensus 5 ~~~k~~~C~~C 15 (36)
T 2elq_A 5 SSGKPFKCSLC 15 (36)
T ss_dssp CCCCSEECSSS
T ss_pred CCCCCccCCCC
Confidence 45778888887
No 81
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=25.00 E-value=25 Score=18.26 Aligned_cols=12 Identities=17% Similarity=0.163 Sum_probs=10.0
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...|.|+.|.||
T Consensus 35 H~~~k~~~C~~C 46 (48)
T 2epr_A 35 HSGEKPYSSGPS 46 (48)
T ss_dssp SCSCCCCCSCCC
T ss_pred cCCCCCccCCCC
Confidence 357889999998
No 82
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.27 E-value=16 Score=17.75 Aligned_cols=11 Identities=18% Similarity=0.558 Sum_probs=8.5
Q ss_pred cccCCCCeeeC
Q 033646 104 AEEDPNACVIC 114 (114)
Q Consensus 104 ~eE~pn~C~Ic 114 (114)
..+.|+.|.+|
T Consensus 5 ~~~k~~~C~~C 15 (37)
T 2elp_A 5 SSGRAMKCPYC 15 (37)
T ss_dssp CCCCCEECSSS
T ss_pred CCCCCeECCCC
Confidence 45778889887
No 83
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=24.17 E-value=77 Score=17.77 Aligned_cols=30 Identities=20% Similarity=0.395 Sum_probs=20.9
Q ss_pred CCCccEEEEecCCCeEEEEeeCCHHHHHHHHHh
Q 033646 7 LAGVDSISMDMKEKKLTVIGDIDPVSIVSKLRK 39 (114)
Q Consensus 7 l~GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK 39 (114)
+.|+=++-+ +|++...|..+...|.+.|++
T Consensus 54 v~~~Pt~~~---~G~~~~~G~~~~~~l~~~l~~ 83 (85)
T 1fo5_A 54 IMAVPTIVI---NGDVEFIGAPTKEALVEAIKK 83 (85)
T ss_dssp TCCSSEEEE---TTEEECCSSSSSHHHHHHHHH
T ss_pred CcccCEEEE---CCEEeeecCCCHHHHHHHHHH
Confidence 445555666 556667788888888888875
No 84
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.17 E-value=12 Score=18.50 Aligned_cols=11 Identities=18% Similarity=0.459 Sum_probs=8.5
Q ss_pred cccCCCCeeeC
Q 033646 104 AEEDPNACVIC 114 (114)
Q Consensus 104 ~eE~pn~C~Ic 114 (114)
..|.|+.|.+|
T Consensus 5 ~~~k~~~C~~C 15 (37)
T 2elm_A 5 SSGHLYYCSQC 15 (37)
T ss_dssp SSSCEEECSSS
T ss_pred CCCcCeECCCC
Confidence 45778889887
No 85
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.93 E-value=26 Score=17.75 Aligned_cols=12 Identities=17% Similarity=0.183 Sum_probs=9.8
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...+.|+.|.+|
T Consensus 35 H~~~k~~~C~~C 46 (46)
T 2eop_A 35 HTGENPSGPSSG 46 (46)
T ss_dssp TTTSCCSCCCCC
T ss_pred cCCCCCCCCCCC
Confidence 457889999988
No 86
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=23.73 E-value=19 Score=17.28 Aligned_cols=11 Identities=27% Similarity=0.585 Sum_probs=8.7
Q ss_pred cccCCCCeeeC
Q 033646 104 AEEDPNACVIC 114 (114)
Q Consensus 104 ~eE~pn~C~Ic 114 (114)
..+.|+.|.+|
T Consensus 7 ~~~k~~~C~~C 17 (37)
T 1p7a_A 7 TGIKPFQCPDC 17 (37)
T ss_dssp CCSSSBCCTTT
T ss_pred CCCCCccCCCC
Confidence 46788899887
No 87
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.69 E-value=26 Score=17.83 Aligned_cols=11 Identities=18% Similarity=0.154 Sum_probs=9.3
Q ss_pred cccCCCCeeeC
Q 033646 104 AEEDPNACVIC 114 (114)
Q Consensus 104 ~eE~pn~C~Ic 114 (114)
..+.|+.|.||
T Consensus 36 ~~~k~~~C~~c 46 (46)
T 2emh_A 36 TGEKPSGPSSG 46 (46)
T ss_dssp HCSSCSSSCCC
T ss_pred CCCCCCCCCCC
Confidence 56889999988
No 88
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=23.54 E-value=1e+02 Score=24.57 Aligned_cols=38 Identities=18% Similarity=0.327 Sum_probs=30.1
Q ss_pred ccccCCCCccEEEEecCCC---eEEEEeeCCHHHHHHHHHh
Q 033646 2 KTVSGLAGVDSISMDMKEK---KLTVIGDIDPVSIVSKLRK 39 (114)
Q Consensus 2 Kal~~l~GV~sV~vD~~~~---kvtV~G~vDp~~lv~~LrK 39 (114)
+.+++++||..++++..+. -++|.|--+..+|+++|+.
T Consensus 325 ~~~r~~~~~~e~~~~~~~~~~~~~~~~G~~n~~~~l~~~k~ 365 (421)
T 1hfe_L 325 KAVRGLDGIKEATVNVGGTDVKVAVVHGAKRFKQVCDDVKA 365 (421)
T ss_dssp GGGCSSCSEEEEEEEETTEEEEEEEEESGGGHHHHHHHHHT
T ss_pred eeeccCCCceEEEEecCCeEEEEEEEcCHHHHHHHHHHHHc
Confidence 4577889999999987663 4556788899999999985
No 89
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.19 E-value=27 Score=17.72 Aligned_cols=12 Identities=17% Similarity=0.135 Sum_probs=9.8
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...+.|+.|.+|
T Consensus 36 H~~~k~~~C~~C 47 (47)
T 2epx_A 36 HTGEKPSGPSSG 47 (47)
T ss_dssp TTTSCSSSCCCC
T ss_pred cCCCCCCCCCCC
Confidence 357889999988
No 90
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.13 E-value=17 Score=17.48 Aligned_cols=11 Identities=27% Similarity=0.531 Sum_probs=8.2
Q ss_pred cccCCCCeeeC
Q 033646 104 AEEDPNACVIC 114 (114)
Q Consensus 104 ~eE~pn~C~Ic 114 (114)
..+.|+.|.+|
T Consensus 5 ~~~k~~~C~~C 15 (36)
T 2elv_A 5 SSGLLYDCHIC 15 (36)
T ss_dssp CCCCCEECSSS
T ss_pred CCCCCeECCCC
Confidence 35678888887
No 91
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=22.95 E-value=15 Score=16.60 Aligned_cols=9 Identities=33% Similarity=1.084 Sum_probs=5.7
Q ss_pred cCCCCeeeC
Q 033646 106 EDPNACVIC 114 (114)
Q Consensus 106 E~pn~C~Ic 114 (114)
|.|+.|.+|
T Consensus 1 ~k~~~C~~C 9 (27)
T 2kvg_A 1 AAPYRCPLC 9 (27)
T ss_dssp CCTEEETTT
T ss_pred CcCcCCCCC
Confidence 346677766
No 92
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.69 E-value=26 Score=17.84 Aligned_cols=12 Identities=8% Similarity=-0.061 Sum_probs=9.7
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...+.|+.|.+|
T Consensus 35 H~~~~~~~C~~C 46 (46)
T 2ytd_A 35 HTGYRPSGPSSG 46 (46)
T ss_dssp HTCCCSSCSSCC
T ss_pred cCCCCCCCCCCC
Confidence 357889999988
No 93
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.67 E-value=30 Score=17.58 Aligned_cols=12 Identities=17% Similarity=0.149 Sum_probs=9.8
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...+.|+.|.+|
T Consensus 35 H~~~~~~~C~~C 46 (46)
T 2enc_A 35 HSGEKPSGPSSG 46 (46)
T ss_dssp SCCSSCCSSCCC
T ss_pred hCCCCCCCCCCC
Confidence 357889999988
No 94
>3boe_A Cadmium-specific carbonic anhydrase; marine diatom, cadmium-bound, acetate LI lyase; 1.40A {Thalassiosira weissflogii} SCOP: c.154.1.1 PDB: 3boc_A 3bob_A 3boj_A 3boh_A
Probab=22.45 E-value=58 Score=24.28 Aligned_cols=21 Identities=29% Similarity=0.406 Sum_probs=18.5
Q ss_pred CCHHHHHHHHHhcC-CeEEeec
Q 033646 28 IDPVSIVSKLRKLC-HTEILSV 48 (114)
Q Consensus 28 vDp~~lv~~LrK~g-~aeivsv 48 (114)
+.|.+|+.+|+-.| .|+|++-
T Consensus 2 ~tp~di~~aLq~RGW~AeIv~~ 23 (210)
T 3boe_A 2 ISPAQIAEALQGRGWDAEIVTD 23 (210)
T ss_dssp CCHHHHHHHHHTTTCEEEEEES
T ss_pred CCHHHHHHHHHcCCCceEEech
Confidence 67999999999888 9999874
No 95
>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus}
Probab=22.43 E-value=64 Score=24.29 Aligned_cols=21 Identities=19% Similarity=0.335 Sum_probs=18.0
Q ss_pred CeEEEEeeCCHHHHHHHHHhc
Q 033646 20 KKLTVIGDIDPVSIVSKLRKL 40 (114)
Q Consensus 20 ~kvtV~G~vDp~~lv~~LrK~ 40 (114)
-.+.|.|++|+..+.+.|++.
T Consensus 183 ~~l~v~Gd~~~~~~~~~i~~~ 203 (406)
T 3eoq_A 183 MVLAATGRVDFDRLLAEAERL 203 (406)
T ss_dssp EEEEEEESCCHHHHHHHHHHH
T ss_pred EEEEEEcCCCHHHHHHHHHHH
Confidence 367889999999999999874
No 96
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.21 E-value=31 Score=17.46 Aligned_cols=12 Identities=17% Similarity=0.135 Sum_probs=9.8
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...+.|+.|.+|
T Consensus 35 H~~~~~~~C~~C 46 (46)
T 2eme_A 35 HTGEKPSGPSSG 46 (46)
T ss_dssp GCCCSCCSSCCC
T ss_pred cCCCCCCCCCCC
Confidence 357889999988
No 97
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.16 E-value=24 Score=17.56 Aligned_cols=11 Identities=45% Similarity=1.072 Sum_probs=8.9
Q ss_pred cccCCCCeeeC
Q 033646 104 AEEDPNACVIC 114 (114)
Q Consensus 104 ~eE~pn~C~Ic 114 (114)
..+.|+.|.+|
T Consensus 7 ~~~k~~~C~~C 17 (42)
T 2eos_A 7 GGEKPYPCEIC 17 (42)
T ss_dssp SSSCCBCCSSS
T ss_pred CCCCCEECCCC
Confidence 46788999887
No 98
>2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A
Probab=22.13 E-value=1.1e+02 Score=20.05 Aligned_cols=25 Identities=8% Similarity=0.143 Sum_probs=21.0
Q ss_pred cCCCeEEEEeeC---CHHHHHHHHHhcC
Q 033646 17 MKEKKLTVIGDI---DPVSIVSKLRKLC 41 (114)
Q Consensus 17 ~~~~kvtV~G~v---Dp~~lv~~LrK~g 41 (114)
+.+.+++++|.+ +...+.+.|+..|
T Consensus 33 l~G~~~v~TG~l~~~~R~e~~~~i~~~G 60 (109)
T 2k6g_A 33 LEGLIFVITGVLESIERDEAKSLIERYG 60 (109)
T ss_dssp TTTCEEEEESBCSSCCHHHHHHHHHHTT
T ss_pred CCCCEEEEeeeCCCCCHHHHHHHHHHcC
Confidence 677899999987 5788888888877
No 99
>2opv_A KHSRP protein; KH domain, RNA binding protein, KSRP; NMR {Homo sapiens}
Probab=22.08 E-value=38 Score=20.88 Aligned_cols=32 Identities=25% Similarity=0.402 Sum_probs=18.7
Q ss_pred ccCCCCccEEEEecCCC-------eEEEEeeCCHHHHHHHHH
Q 033646 4 VSGLAGVDSISMDMKEK-------KLTVIGDIDPVSIVSKLR 38 (114)
Q Consensus 4 l~~l~GV~sV~vD~~~~-------kvtV~G~vDp~~lv~~Lr 38 (114)
|....|+ .|.++-... .|+|.| ++..+..+.+
T Consensus 39 I~~~tga-~I~i~~~~~~~~~~er~v~I~G--~~~~v~~A~~ 77 (85)
T 2opv_A 39 LQERAGV-KMILIQDGSQNTNVDKPLRIIG--DPYKVQQACE 77 (85)
T ss_dssp HHHHHTC-EEEECSSSCSSTTSCEEEEEEE--CHHHHHHHHH
T ss_pred HHHHHCC-EEEEcCCCCCCCCCceEEEEEe--CHHHHHHHHH
Confidence 3444566 466664322 299999 7766655543
No 100
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.02 E-value=30 Score=17.60 Aligned_cols=12 Identities=17% Similarity=0.135 Sum_probs=9.7
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...|.|+.|.+|
T Consensus 35 H~~~k~~~C~~c 46 (46)
T 2ep2_A 35 HTGEKPSGPSSG 46 (46)
T ss_dssp TSSCCSCCSCCC
T ss_pred hCCCCCCCCCCC
Confidence 356889999988
No 101
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=21.89 E-value=54 Score=19.65 Aligned_cols=21 Identities=24% Similarity=0.509 Sum_probs=17.4
Q ss_pred CccEEEEecCCCeEEEEeeCC
Q 033646 9 GVDSISMDMKEKKLTVIGDID 29 (114)
Q Consensus 9 GV~sV~vD~~~~kvtV~G~vD 29 (114)
|-..|.+.-.+..|||.|.+.
T Consensus 31 gyndinvtwdgdtvtvegqle 51 (62)
T 2gjh_A 31 GYNDINVTWDGDTVTVEGQLE 51 (62)
T ss_dssp TCCSCEEEECSSCEEEEEECC
T ss_pred CcccceeEEcCCEEEEEeEEc
Confidence 677788888889999999864
No 102
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=21.85 E-value=35 Score=21.74 Aligned_cols=16 Identities=13% Similarity=0.607 Sum_probs=12.9
Q ss_pred cccCCCCccEEEEecC
Q 033646 3 TVSGLAGVDSISMDMK 18 (114)
Q Consensus 3 al~~l~GV~sV~vD~~ 18 (114)
+|..++||.+|++++.
T Consensus 68 al~~l~gv~~v~V~l~ 83 (103)
T 1uwd_A 68 AIKKIEGVNNVEVELT 83 (103)
T ss_dssp HHHTSSSCCEEEEEEC
T ss_pred HHHhCCCcceEEEEEe
Confidence 5778899999988753
No 103
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.81 E-value=30 Score=17.61 Aligned_cols=12 Identities=8% Similarity=-0.003 Sum_probs=9.9
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...+.|+.|.+|
T Consensus 37 H~~~k~~~C~~C 48 (48)
T 2ent_A 37 HSGVKPSGPSSG 48 (48)
T ss_dssp SCCCCSCSSCCC
T ss_pred hCCCCCCCCCCC
Confidence 357889999998
No 104
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=21.81 E-value=94 Score=21.16 Aligned_cols=44 Identities=16% Similarity=0.344 Sum_probs=33.6
Q ss_pred CCccEEEEecCCCeEEEEeeCCH----HHHHHHHHhcC-CeEEeecCCC
Q 033646 8 AGVDSISMDMKEKKLTVIGDIDP----VSIVSKLRKLC-HTEILSVGPA 51 (114)
Q Consensus 8 ~GV~sV~vD~~~~kvtV~G~vDp----~~lv~~LrK~g-~aeivsv~p~ 51 (114)
+.|..|+.+..--.++|.|..+. .+|...|.+.+ .+.+++.+..
T Consensus 5 ~~v~gIa~~~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~ 53 (167)
T 2dt9_A 5 KAVTGVALDLDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVP 53 (167)
T ss_dssp CCEEEEEEECSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCC
T ss_pred CceeEEEEeCCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCC
Confidence 35778888877789999985443 57888888888 9998887643
No 105
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.54 E-value=30 Score=17.56 Aligned_cols=12 Identities=8% Similarity=0.138 Sum_probs=9.7
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...+.|+.|.||
T Consensus 35 H~~~k~~~C~~c 46 (46)
T 2ytj_A 35 HTKQKPSGPSSG 46 (46)
T ss_dssp TSCCCCSSCSCC
T ss_pred cCCCCCCCCCCC
Confidence 356889999987
No 106
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.51 E-value=29 Score=17.62 Aligned_cols=12 Identities=25% Similarity=0.185 Sum_probs=9.6
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...+.|+.|.+|
T Consensus 35 H~~~k~~~C~~C 46 (46)
T 2emy_A 35 HAGEKPSGPSSG 46 (46)
T ss_dssp HTTSCCSCSSCC
T ss_pred cCCCCCCCCCCC
Confidence 356889999988
No 107
>1j5k_A Heterogeneous nuclear ribonucleoprotein K; single-stranded DNA binding protein, transcription factor, hnRNP K, CT element, C-MYC oncogene; NMR {Homo sapiens} SCOP: d.51.1.1 PDB: 1khm_A
Probab=21.45 E-value=44 Score=20.79 Aligned_cols=25 Identities=24% Similarity=0.444 Sum_probs=16.3
Q ss_pred cccCCCCccEEEEecC-----CCeEEEEeeC
Q 033646 3 TVSGLAGVDSISMDMK-----EKKLTVIGDI 28 (114)
Q Consensus 3 al~~l~GV~sV~vD~~-----~~kvtV~G~v 28 (114)
.|....|+ .|.++.. .+.|+|+|+.
T Consensus 38 ~I~~~tga-~I~I~~~~~~~~~~~v~I~G~~ 67 (89)
T 1j5k_A 38 QIRHESGA-SIKIDEPLEGSEDRIITITGTQ 67 (89)
T ss_dssp HHHHHTCC-EEEECSCCSSSSEEEEEEEEEH
T ss_pred HHHHHhCC-eEEecCCCCCCCccEEEEEcCH
Confidence 34445666 4777642 4689999983
No 108
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.35 E-value=30 Score=17.56 Aligned_cols=12 Identities=8% Similarity=0.014 Sum_probs=9.6
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...+.|+.|.+|
T Consensus 35 H~~~~~~~C~~C 46 (46)
T 2yu8_A 35 HTGGKPSGPSSG 46 (46)
T ss_dssp HHSCCCSCSCCC
T ss_pred cCCCCCCCCCCC
Confidence 356889999988
No 109
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=21.25 E-value=38 Score=21.64 Aligned_cols=16 Identities=25% Similarity=0.628 Sum_probs=12.8
Q ss_pred cccCCCCccEEEEecC
Q 033646 3 TVSGLAGVDSISMDMK 18 (114)
Q Consensus 3 al~~l~GV~sV~vD~~ 18 (114)
+|..++||.+|++++.
T Consensus 67 al~~l~gv~~V~V~l~ 82 (103)
T 3cq1_A 67 ALSRLPGVEEVEVEVT 82 (103)
T ss_dssp HHHTSTTCCEEEEEEC
T ss_pred HHHhCCCceeEEEEEe
Confidence 5678899999988753
No 110
>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas}
Probab=21.23 E-value=75 Score=23.81 Aligned_cols=23 Identities=22% Similarity=0.345 Sum_probs=19.2
Q ss_pred CCeEEEEeeCCHHHHHHHHHhcC
Q 033646 19 EKKLTVIGDIDPVSIVSKLRKLC 41 (114)
Q Consensus 19 ~~kvtV~G~vDp~~lv~~LrK~g 41 (114)
.-.+.|.|++|+..+...+++..
T Consensus 189 ~~~l~v~Gd~~~~~~~~~~~~~f 211 (424)
T 3amj_B 189 TAVVTLVGDITRAEAETIAQQLT 211 (424)
T ss_dssp SCEEEEEESCCHHHHHHHHHHTT
T ss_pred ceEEEEEeCCCHHHHHHHHHHHH
Confidence 34788899999999999998743
No 111
>3mso_A Steroid delta-isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.57A {Pseudomonas aeruginosa}
Probab=21.17 E-value=55 Score=21.79 Aligned_cols=34 Identities=24% Similarity=0.311 Sum_probs=27.6
Q ss_pred CCCCccEEEEecCCCeEEEEeeCCHHHHHHHHHh
Q 033646 6 GLAGVDSISMDMKEKKLTVIGDIDPVSIVSKLRK 39 (114)
Q Consensus 6 ~l~GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK 39 (114)
.+.||+-+.+|-.+.-..+.+-++|.+.+.+|..
T Consensus 95 ~v~Gv~v~~~~~dGkI~~~~~~~~P~~~~~~~~~ 128 (143)
T 3mso_A 95 ELKGIDMIRFDDDGRIVDFEVMVRPMSGLQALGE 128 (143)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEESHHHHHHHHH
T ss_pred EEEEEEEEEECCCCcEEEEEEEECcHHHHHHHHH
Confidence 3568888888866667778889999999999974
No 112
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.13 E-value=33 Score=17.45 Aligned_cols=12 Identities=8% Similarity=-0.108 Sum_probs=9.9
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...+.|+.|.+|
T Consensus 35 H~~~~~~~C~~C 46 (46)
T 2elz_A 35 HMGEKTSGPSSG 46 (46)
T ss_dssp GGSCCCCCSCCC
T ss_pred cCCCCCCCCCCC
Confidence 457889999988
No 113
>1nee_A EIF-2-beta, probable translation initiation factor 2 beta subunit; two domain protein, mixed alpha-beta structure; NMR {Methanothermobacterthermautotrophicus} SCOP: d.241.1.1 g.59.1.1
Probab=21.12 E-value=35 Score=23.85 Aligned_cols=24 Identities=8% Similarity=0.261 Sum_probs=20.9
Q ss_pred EEecCCCeEEEEeeCCHHHHHHHHHh
Q 033646 14 SMDMKEKKLTVIGDIDPVSIVSKLRK 39 (114)
Q Consensus 14 ~vD~~~~kvtV~G~vDp~~lv~~LrK 39 (114)
++| +++++|.|.+++..|-+.|++
T Consensus 74 ~id--~~rlii~G~~~~~~i~~~L~~ 97 (138)
T 1nee_A 74 NLE--GGRAILQGKFTHFLINERIED 97 (138)
T ss_dssp CCB--TTTEEEESSCSSSHHHHHHHH
T ss_pred eec--CCEEEEEeeeCHHHHHHHHHH
Confidence 456 889999999999999998875
No 114
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=21.11 E-value=33 Score=17.47 Aligned_cols=12 Identities=17% Similarity=0.135 Sum_probs=9.6
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...+.|+.|.+|
T Consensus 35 H~~~k~~~C~~C 46 (46)
T 2emk_A 35 HTGEKPSGPSSG 46 (46)
T ss_dssp HSSCCCSSCCCC
T ss_pred cCCCCCCCCCCC
Confidence 356889999988
No 115
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.09 E-value=33 Score=17.55 Aligned_cols=12 Identities=8% Similarity=0.061 Sum_probs=9.7
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...+.|+.|.+|
T Consensus 35 H~~~~~~~C~~C 46 (46)
T 2ytm_A 35 HTGQRPSGPSSG 46 (46)
T ss_dssp HHSCCCCCCCCC
T ss_pred cCCCCCCCCCCC
Confidence 356889999988
No 116
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.87 E-value=30 Score=17.67 Aligned_cols=12 Identities=17% Similarity=0.169 Sum_probs=9.8
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...+.|+.|.+|
T Consensus 35 H~~~k~~~C~~C 46 (46)
T 2ytt_A 35 HTREKPSGPSSG 46 (46)
T ss_dssp HHHCCCCSCCCC
T ss_pred cCCCCCCCCCCC
Confidence 357889999988
No 117
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.85 E-value=35 Score=17.32 Aligned_cols=12 Identities=17% Similarity=0.135 Sum_probs=9.7
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...+.|+.|.+|
T Consensus 35 H~~~k~~~C~~C 46 (46)
T 2ene_A 35 HTGEKPSGPSSG 46 (46)
T ss_dssp TCCCCCCSCCCC
T ss_pred cCCCCCCCCCCC
Confidence 356889999988
No 118
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.78 E-value=35 Score=17.23 Aligned_cols=12 Identities=17% Similarity=0.149 Sum_probs=9.8
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...+.|+.|.+|
T Consensus 35 H~~~~~~~C~~C 46 (46)
T 2eq4_A 35 HSGEKPSGPSSG 46 (46)
T ss_dssp CCSSSCCCCCCC
T ss_pred cCCCCCCCCCCC
Confidence 357889999988
No 119
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.74 E-value=33 Score=17.41 Aligned_cols=12 Identities=17% Similarity=0.158 Sum_probs=9.6
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...+.|+.|.+|
T Consensus 35 H~~~k~~~C~~C 46 (46)
T 2eoq_A 35 HTAEKPSGPSSG 46 (46)
T ss_dssp TTCCCSSSCCCC
T ss_pred cCCCCCCCCCCC
Confidence 356789999988
No 120
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=20.65 E-value=28 Score=17.64 Aligned_cols=12 Identities=8% Similarity=-0.017 Sum_probs=9.8
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...+.|+.|.+|
T Consensus 35 H~~~k~~~C~~C 46 (46)
T 2el4_A 35 HTGVKPSGPSSG 46 (46)
T ss_dssp SSSCCCSCCTTC
T ss_pred hCCCCCCCCCCC
Confidence 457889999988
No 121
>1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B*
Probab=20.65 E-value=73 Score=24.10 Aligned_cols=20 Identities=25% Similarity=0.298 Sum_probs=17.4
Q ss_pred eEEEEeeCCHHHHHHHHHhc
Q 033646 21 KLTVIGDIDPVSIVSKLRKL 40 (114)
Q Consensus 21 kvtV~G~vDp~~lv~~LrK~ 40 (114)
.+.|+|++|+..++..|++.
T Consensus 190 ~l~v~Gd~~~~~~~~~i~~~ 209 (443)
T 1hr6_B 190 VLAGAGAVDHEKLVQYAQKY 209 (443)
T ss_dssp EEEEEESCCHHHHHHHHHHH
T ss_pred EEEEEcCCCHHHHHHHHHHH
Confidence 67789999999999999864
No 122
>3flj_A Uncharacterized protein conserved in bacteria WIT cystatin-like fold; YP_168589.1; HET: MSE; 2.00A {Silicibacter pomeroyi dss-3}
Probab=20.61 E-value=49 Score=23.15 Aligned_cols=34 Identities=24% Similarity=0.241 Sum_probs=28.1
Q ss_pred CCCCccEEEEecCCCeEEEEeeCCHHHHHHHHHh
Q 033646 6 GLAGVDSISMDMKEKKLTVIGDIDPVSIVSKLRK 39 (114)
Q Consensus 6 ~l~GV~sV~vD~~~~kvtV~G~vDp~~lv~~LrK 39 (114)
.+.||+-+.+|-.+.-..+..-++|.+.+.+|..
T Consensus 102 ~v~gvd~~~fdedGkI~e~~vm~rP~k~l~al~~ 135 (155)
T 3flj_A 102 DAVGVDLITLNEGGLIQDFEVVMRPYKTVGALRD 135 (155)
T ss_dssp EEEEEEEEEECTTSSEEEEEEEEECHHHHHHHHH
T ss_pred EEEEEEEEEEcCCCCEEEEEEEEChHHHHHHHHH
Confidence 3568888888877777778889999999999974
No 123
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.54 E-value=35 Score=17.30 Aligned_cols=11 Identities=18% Similarity=0.154 Sum_probs=9.2
Q ss_pred cccCCCCeeeC
Q 033646 104 AEEDPNACVIC 114 (114)
Q Consensus 104 ~eE~pn~C~Ic 114 (114)
..+.|+.|.+|
T Consensus 36 ~~~k~~~C~~C 46 (46)
T 2emp_A 36 TGEKPSGPSSG 46 (46)
T ss_dssp HCCSCCSCCCC
T ss_pred CCCCCCCCCCC
Confidence 56889999988
No 124
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.52 E-value=35 Score=17.13 Aligned_cols=12 Identities=33% Similarity=0.307 Sum_probs=9.7
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...+.|+.|.+|
T Consensus 33 H~~~~~~~C~~C 44 (44)
T 2emx_A 33 HAEEKPSGPSSG 44 (44)
T ss_dssp HTSSCSCSCCCC
T ss_pred hCCCCCCCCCCC
Confidence 357889999988
No 125
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.39 E-value=34 Score=17.33 Aligned_cols=12 Identities=17% Similarity=0.135 Sum_probs=9.7
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...+.|+.|.+|
T Consensus 35 H~~~~~~~C~~C 46 (46)
T 2en1_A 35 HTGEKPSGPSSG 46 (46)
T ss_dssp GSCCCCSCCCCC
T ss_pred cCCCCCCCCCCC
Confidence 356889999988
No 126
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.33 E-value=28 Score=17.79 Aligned_cols=11 Identities=36% Similarity=0.821 Sum_probs=8.7
Q ss_pred cccCCCCeeeC
Q 033646 104 AEEDPNACVIC 114 (114)
Q Consensus 104 ~eE~pn~C~Ic 114 (114)
..+.|+.|.+|
T Consensus 8 ~~~k~~~C~~C 18 (46)
T 2yth_A 8 SGEKPFQCEEC 18 (46)
T ss_dssp CCSSSBCCSSS
T ss_pred CCCcCCCCCCC
Confidence 46788889887
No 127
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.31 E-value=28 Score=17.38 Aligned_cols=11 Identities=27% Similarity=0.688 Sum_probs=8.8
Q ss_pred cccCCCCeeeC
Q 033646 104 AEEDPNACVIC 114 (114)
Q Consensus 104 ~eE~pn~C~Ic 114 (114)
..+.|+.|.+|
T Consensus 8 ~~~k~~~C~~C 18 (44)
T 2en7_A 8 TGMKPYVCNEC 18 (44)
T ss_dssp SSSSSSCCTTT
T ss_pred CCCcCeECCCC
Confidence 46788999887
No 128
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.27 E-value=34 Score=17.27 Aligned_cols=12 Identities=17% Similarity=0.135 Sum_probs=9.7
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...+.|+.|.+|
T Consensus 35 H~~~~~~~C~~C 46 (46)
T 2ytr_A 35 HTGEKPSGPSSG 46 (46)
T ss_dssp TTTCSCCCSCCC
T ss_pred cCCCCCCCCCCC
Confidence 356889999988
No 129
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=20.25 E-value=36 Score=17.33 Aligned_cols=12 Identities=17% Similarity=0.135 Sum_probs=9.8
Q ss_pred ccccCCCCeeeC
Q 033646 103 SAEEDPNACVIC 114 (114)
Q Consensus 103 ~~eE~pn~C~Ic 114 (114)
...+.|+.|.+|
T Consensus 35 H~~~k~~~C~~C 46 (46)
T 2ely_A 35 HTGEKPSGPSSG 46 (46)
T ss_dssp HSCCSSCSCCCC
T ss_pred cCCCCCCCCCCC
Confidence 357889999988
Done!