BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033652
(114 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q83ED9|RL27_COXBU 50S ribosomal protein L27 OS=Coxiella burnetii (strain RSA 493 /
Nine Mile phase I) GN=rpmA PE=3 SV=1
Length = 90
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 66/86 (76%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
A KK GST+NGRDS PK LGVK+FGGERV+ GNIIVRQRGT + PG+ +GMG+DHTLY
Sbjct: 1 MAHKKAGGSTRNGRDSNPKMLGVKRFGGERVLAGNIIVRQRGTHYRPGENMGMGRDHTLY 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEPKE 90
AL EG+VKF + R +V +EP E
Sbjct: 61 ALIEGKVKFTRKGPKKRNFVSIEPLE 86
>sp|A9NBL4|RL27_COXBR 50S ribosomal protein L27 OS=Coxiella burnetii (strain RSA 331 /
Henzerling II) GN=rpmA PE=3 SV=1
Length = 90
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 66/86 (76%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
A KK GST+NGRDS PK LGVK+FGGERV+ GNIIVRQRGT + PG+ +GMG+DHTLY
Sbjct: 1 MAHKKAGGSTRNGRDSNPKMLGVKRFGGERVLAGNIIVRQRGTHYRPGENMGMGRDHTLY 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEPKE 90
AL EG+VKF + R +V +EP E
Sbjct: 61 ALIEGKVKFTRKGPKKRNFVSIEPLE 86
>sp|B6J1S9|RL27_COXB2 50S ribosomal protein L27 OS=Coxiella burnetii (strain CbuG_Q212)
GN=rpmA PE=3 SV=1
Length = 90
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 66/86 (76%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
A KK GST+NGRDS PK LGVK+FGGERV+ GNIIVRQRGT + PG+ +GMG+DHTLY
Sbjct: 1 MAHKKAGGSTRNGRDSNPKMLGVKRFGGERVLAGNIIVRQRGTHYRPGENMGMGRDHTLY 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEPKE 90
AL EG+VKF + R +V +EP E
Sbjct: 61 ALIEGKVKFTRKGPKKRNFVSIEPLE 86
>sp|B6J9K3|RL27_COXB1 50S ribosomal protein L27 OS=Coxiella burnetii (strain CbuK_Q154)
GN=rpmA PE=3 SV=1
Length = 90
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 66/86 (76%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
A KK GST+NGRDS PK LGVK+FGGERV+ GNIIVRQRGT + PG+ +GMG+DHTLY
Sbjct: 1 MAHKKAGGSTRNGRDSNPKMLGVKRFGGERVLAGNIIVRQRGTHYRPGENMGMGRDHTLY 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEPKE 90
AL EG+VKF + R +V +EP E
Sbjct: 61 ALIEGKVKFTRKGPKKRNFVSIEPLE 86
>sp|A9KEJ8|RL27_COXBN 50S ribosomal protein L27 OS=Coxiella burnetii (strain Dugway
5J108-111) GN=rpmA PE=3 SV=1
Length = 90
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 66/86 (76%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
A KK GST+NGRDS PK LGVK+FGGERV+ GNIIVRQRGT + PG+ +GMG+DHTLY
Sbjct: 1 MAHKKAGGSTRNGRDSNPKMLGVKRFGGERVLAGNIIVRQRGTHYRPGENMGMGRDHTLY 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEPKE 90
AL EG+VKF + R +V +EP E
Sbjct: 61 ALIEGKVKFIRKGPKKRNFVSIEPLE 86
>sp|A9IM57|RL27_BART1 50S ribosomal protein L27 OS=Bartonella tribocorum (strain CIP
105476 / IBS 506) GN=rpmA PE=3 SV=1
Length = 89
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/83 (67%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 6 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYA 65
A KK GS++NGRDS+ K LGVKKFGGE VI GNIIVRQRGTR+HPGD VG+GKDHTL+A
Sbjct: 2 AHKKAGGSSRNGRDSESKRLGVKKFGGESVIAGNIIVRQRGTRWHPGDNVGIGKDHTLFA 61
Query: 66 LKEGRVKFEKHKLSGRKWVHVEP 88
L EG+V F++ K R +V V P
Sbjct: 62 LSEGKVSFQR-KAGNRSYVSVIP 83
>sp|Q2VZU3|RL27_MAGSA 50S ribosomal protein L27 OS=Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264) GN=rpmA PE=3 SV=1
Length = 89
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
A KK GS++NGRDS + LGVKKFGGE VIPGNIIVRQRGT+F+PG VGMGKDHTL+
Sbjct: 1 MAHKKAGGSSRNGRDSAGQRLGVKKFGGELVIPGNIIVRQRGTKFYPGTNVGMGKDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEP 88
A G+V F KHK GR +V VEP
Sbjct: 61 ATAMGKVSF-KHKAEGRTFVVVEP 83
>sp|Q87SU3|RL27_VIBPA 50S ribosomal protein L27 OS=Vibrio parahaemolyticus serotype
O3:K6 (strain RIMD 2210633) GN=rpmA PE=3 SV=1
Length = 85
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 66/85 (77%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G+ VG+GKDHTL+
Sbjct: 1 MAHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGNNVGIGKDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEPK 89
AL EG+VKFE RK+V +E +
Sbjct: 61 ALTEGKVKFEVKGPKNRKFVSIEAE 85
>sp|A7N0G1|RL27_VIBHB 50S ribosomal protein L27 OS=Vibrio harveyi (strain ATCC BAA-1116
/ BB120) GN=rpmA PE=3 SV=1
Length = 85
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 66/85 (77%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G+ VG+GKDHTL+
Sbjct: 1 MAHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGNNVGIGKDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEPK 89
AL EG+VKFE RK+V +E +
Sbjct: 61 ALTEGKVKFEVKGPKNRKFVSIEAE 85
>sp|C3LRG7|RL27_VIBCM 50S ribosomal protein L27 OS=Vibrio cholerae serotype O1 (strain
M66-2) GN=rpmA PE=3 SV=1
Length = 86
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 66/86 (76%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G VG+GKDHTL+
Sbjct: 1 MAHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGTNVGIGKDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEPKE 90
AL +G+VKFE + RK+V +E E
Sbjct: 61 ALSDGKVKFEVKGPNNRKFVSIETAE 86
>sp|Q9KUS9|RL27_VIBCH 50S ribosomal protein L27 OS=Vibrio cholerae serotype O1 (strain
ATCC 39315 / El Tor Inaba N16961) GN=rpmA PE=3 SV=1
Length = 86
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 66/86 (76%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G VG+GKDHTL+
Sbjct: 1 MAHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGTNVGIGKDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEPKE 90
AL +G+VKFE + RK+V +E E
Sbjct: 61 ALSDGKVKFEVKGPNNRKFVSIETAE 86
>sp|A5F8P1|RL27_VIBC3 50S ribosomal protein L27 OS=Vibrio cholerae serotype O1 (strain
ATCC 39541 / Ogawa 395 / O395) GN=rpmA PE=3 SV=1
Length = 86
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 66/86 (76%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G VG+GKDHTL+
Sbjct: 1 MAHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGTNVGIGKDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEPKE 90
AL +G+VKFE + RK+V +E E
Sbjct: 61 ALSDGKVKFEVKGPNNRKFVSIETAE 86
>sp|B5FGF8|RL27_VIBFM 50S ribosomal protein L27 OS=Vibrio fischeri (strain MJ11)
GN=rpmA PE=3 SV=1
Length = 85
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 65/85 (76%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G VG+GKDHTL+
Sbjct: 1 MAHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGTNVGIGKDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEPK 89
AL EG+VKFE RK+V +E +
Sbjct: 61 ALSEGKVKFEVKGPKNRKFVSIEAE 85
>sp|Q5E872|RL27_VIBF1 50S ribosomal protein L27 OS=Vibrio fischeri (strain ATCC 700601
/ ES114) GN=rpmA PE=3 SV=1
Length = 85
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 65/85 (76%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G VG+GKDHTL+
Sbjct: 1 MAHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGTNVGIGKDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEPK 89
AL EG+VKFE RK+V +E +
Sbjct: 61 ALSEGKVKFEVKGPKNRKFVSIEAE 85
>sp|Q2GCN3|RL27_NEOSM 50S ribosomal protein L27 OS=Neorickettsia sennetsu (strain
Miyayama) GN=rpmA PE=3 SV=1
Length = 82
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
ATKK GS+ NGRDS K LGVKKFG ERVIPG+IIVRQRGT+FHPG VGMG DHT++
Sbjct: 1 MATKKAGGSSSNGRDSIGKRLGVKKFGSERVIPGDIIVRQRGTKFHPGRNVGMGSDHTIF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHV 86
A+K G V F L GR++VHV
Sbjct: 61 AMKSGSVSFSV-GLRGRRFVHV 81
>sp|B4RZH4|RL27_ALTMD 50S ribosomal protein L27 OS=Alteromonas macleodii (strain DSM
17117 / Deep ecotype) GN=rpmA1 PE=3 SV=1
Length = 85
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 65/82 (79%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
A KK GSTKNGRDS+ K LGVK+FGGE V+ GNIIVRQRGTRFH GD +G+GKDHTL+
Sbjct: 1 MAHKKAGGSTKNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTRFHAGDNMGIGKDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHV 86
ALK+G+V+F+ RK+V +
Sbjct: 61 ALKDGKVQFDVKGPKNRKFVSI 82
>sp|B0UVI0|RL27_HAES2 50S ribosomal protein L27 OS=Haemophilus somnus (strain 2336)
GN=rpmA PE=3 SV=1
Length = 85
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 63/82 (76%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
ATKK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G VGMGKDHTL+
Sbjct: 1 MATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGSNVGMGKDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHV 86
A +G+VKFE RK+V V
Sbjct: 61 ATADGKVKFEVKGEKSRKYVSV 82
>sp|Q0I1P7|RL27_HAES1 50S ribosomal protein L27 OS=Haemophilus somnus (strain 129Pt)
GN=rpmA PE=3 SV=1
Length = 85
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 63/82 (76%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
ATKK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G VGMGKDHTL+
Sbjct: 1 MATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGSNVGMGKDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHV 86
A +G+VKFE RK+V V
Sbjct: 61 ATADGKVKFEVKGEKSRKYVSV 82
>sp|Q7MP93|RL27_VIBVY 50S ribosomal protein L27 OS=Vibrio vulnificus (strain YJ016)
GN=rpmA PE=3 SV=1
Length = 85
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 66/85 (77%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G+ VG+GKDHTL+
Sbjct: 1 MAHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTQFHAGNNVGLGKDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEPK 89
AL +G+VKFE RK+V +E +
Sbjct: 61 ALTDGKVKFEVKGPKNRKFVSIEAE 85
>sp|Q8DEC5|RL27_VIBVU 50S ribosomal protein L27 OS=Vibrio vulnificus (strain CMCP6)
GN=rpmA PE=3 SV=1
Length = 85
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 66/85 (77%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G+ VG+GKDHTL+
Sbjct: 1 MAHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTQFHAGNNVGLGKDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEPK 89
AL +G+VKFE RK+V +E +
Sbjct: 61 ALTDGKVKFEVKGPKNRKFVSIEAE 85
>sp|B0BU26|RL27_ACTPJ 50S ribosomal protein L27 OS=Actinobacillus pleuropneumoniae
serotype 3 (strain JL03) GN=rpmA PE=3 SV=1
Length = 85
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 64/82 (78%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
ATKK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G+ VGMGKDHTL+
Sbjct: 1 MATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGNNVGMGKDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHV 86
A +G+VKFE RK+V +
Sbjct: 61 ATADGKVKFEVKGEKNRKYVSI 82
>sp|B3GZE6|RL27_ACTP7 50S ribosomal protein L27 OS=Actinobacillus pleuropneumoniae
serotype 7 (strain AP76) GN=rpmA PE=3 SV=1
Length = 85
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 64/82 (78%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
ATKK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G+ VGMGKDHTL+
Sbjct: 1 MATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGNNVGMGKDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHV 86
A +G+VKFE RK+V +
Sbjct: 61 ATADGKVKFEVKGEKNRKYVSI 82
>sp|A3N3T8|RL27_ACTP2 50S ribosomal protein L27 OS=Actinobacillus pleuropneumoniae
serotype 5b (strain L20) GN=rpmA PE=3 SV=1
Length = 85
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 64/82 (78%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
ATKK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G+ VGMGKDHTL+
Sbjct: 1 MATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGNNVGMGKDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHV 86
A +G+VKFE RK+V +
Sbjct: 61 ATADGKVKFEVKGEKNRKYVSI 82
>sp|A8G8Z2|RL27_SERP5 50S ribosomal protein L27 OS=Serratia proteamaculans (strain 568)
GN=rpmA PE=3 SV=1
Length = 85
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 66/85 (77%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
A KK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G VG GKDHTL+
Sbjct: 1 MAHKKAGGSTRNGRDSEAKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGTNVGCGKDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEPK 89
ALK+G+VKFE S RK++ +E +
Sbjct: 61 ALKDGKVKFEVKGPSNRKFISIEAE 85
>sp|B8F874|RL27_HAEPS 50S ribosomal protein L27 OS=Haemophilus parasuis serovar 5
(strain SH0165) GN=rpmA PE=3 SV=1
Length = 85
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 63/82 (76%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
ATKK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G VGMGKDHTL+
Sbjct: 1 MATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGSNVGMGKDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHV 86
A +G+VKFE RK+V +
Sbjct: 61 ATADGKVKFEVKGEKNRKYVSI 82
>sp|Q7VP91|RL27_HAEDU 50S ribosomal protein L27 OS=Haemophilus ducreyi (strain 35000HP
/ ATCC 700724) GN=rpmA PE=3 SV=1
Length = 85
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 63/82 (76%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
ATKK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G VGMGKDHTL+
Sbjct: 1 MATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGSNVGMGKDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHV 86
A +G+VKFE RK+V +
Sbjct: 61 ATADGKVKFEVKGEKNRKYVSI 82
>sp|Q2G9U8|RL27_NOVAD 50S ribosomal protein L27 OS=Novosphingobium aromaticivorans
(strain DSM 12444) GN=rpmA PE=3 SV=1
Length = 89
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
A KK GS++NGRDS + LGVKKFGG+ V+ GNII+RQRGTR +PG VGMGKDHTL+
Sbjct: 1 MAHKKAGGSSRNGRDSAGRRLGVKKFGGQEVVGGNIIIRQRGTRVYPGANVGMGKDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVE 87
AL EGRV+F KL GRK+V V+
Sbjct: 61 ALAEGRVRFHAGKL-GRKYVSVD 82
>sp|A9L429|RL27_SHEB9 50S ribosomal protein L27 OS=Shewanella baltica (strain OS195)
GN=rpmA PE=3 SV=1
Length = 84
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 65/84 (77%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G VG+G+DHTL+
Sbjct: 1 MAHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGVNVGIGRDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEP 88
AL +G+VKFE + RK++ +E
Sbjct: 61 ALTDGKVKFEVKGANNRKFISIEA 84
>sp|A6WK50|RL27_SHEB8 50S ribosomal protein L27 OS=Shewanella baltica (strain OS185)
GN=rpmA PE=3 SV=1
Length = 84
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 65/84 (77%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G VG+G+DHTL+
Sbjct: 1 MAHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGVNVGIGRDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEP 88
AL +G+VKFE + RK++ +E
Sbjct: 61 ALTDGKVKFEVKGANNRKFISIEA 84
>sp|A3D179|RL27_SHEB5 50S ribosomal protein L27 OS=Shewanella baltica (strain OS155 /
ATCC BAA-1091) GN=rpmA PE=3 SV=1
Length = 84
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 65/84 (77%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G VG+G+DHTL+
Sbjct: 1 MAHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGVNVGIGRDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEP 88
AL +G+VKFE + RK++ +E
Sbjct: 61 ALTDGKVKFEVKGANNRKFISIEA 84
>sp|B8EC05|RL27_SHEB2 50S ribosomal protein L27 OS=Shewanella baltica (strain OS223)
GN=rpmA PE=3 SV=1
Length = 84
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 65/84 (77%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G VG+G+DHTL+
Sbjct: 1 MAHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGVNVGIGRDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEP 88
AL +G+VKFE + RK++ +E
Sbjct: 61 ALTDGKVKFEVKGANNRKFISIEA 84
>sp|Q0AKX6|RL27_MARMM 50S ribosomal protein L27 OS=Maricaulis maris (strain MCS10)
GN=rpmA PE=3 SV=1
Length = 89
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
A KK GS++NGRDS + LGVKK+GG+ VIPGNIIVRQRGT+ +PG VGMGKDHTL+
Sbjct: 1 MAHKKAGGSSRNGRDSAGRRLGVKKYGGQEVIPGNIIVRQRGTKVNPGANVGMGKDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEP 88
AL EGRV F K K G+ +V VEP
Sbjct: 61 ALTEGRVVFAK-KSGGKAFVSVEP 83
>sp|B6EL42|RL27_ALISL 50S ribosomal protein L27 OS=Aliivibrio salmonicida (strain
LFI1238) GN=rpmA PE=3 SV=1
Length = 85
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 65/85 (76%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
A KK GST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G VG+GKDHTL+
Sbjct: 1 MAHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGTNVGIGKDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEPK 89
AL EG+VKFE RK+V ++ +
Sbjct: 61 ALSEGKVKFEVKGPKNRKFVSIDAE 85
>sp|Q6G507|RL27_BARHE 50S ribosomal protein L27 OS=Bartonella henselae (strain ATCC
49882 / Houston 1) GN=rpmA PE=3 SV=1
Length = 89
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 6 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYA 65
A KK GS++NGRDS+ K LGVKKFGGE VI GNIIVRQRGTR+HPGD VG+GKDHTL+A
Sbjct: 2 AHKKAGGSSRNGRDSESKRLGVKKFGGEAVIAGNIIVRQRGTRWHPGDNVGIGKDHTLFA 61
Query: 66 LKEGRVKFEKHKLSGRKWVHVEP 88
L +G V F++ K + R +V V P
Sbjct: 62 LSKGMVSFQR-KANNRSYVSVIP 83
>sp|A5UI24|RL27_HAEIG 50S ribosomal protein L27 OS=Haemophilus influenzae (strain
PittGG) GN=rpmA PE=3 SV=1
Length = 85
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 64/82 (78%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
ATKK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G+ VGMG+DHTL+
Sbjct: 1 MATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGNNVGMGRDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHV 86
A +G+VKFE RK+V +
Sbjct: 61 ATADGKVKFEVKGEKSRKYVSI 82
>sp|A5UDJ5|RL27_HAEIE 50S ribosomal protein L27 OS=Haemophilus influenzae (strain
PittEE) GN=rpmA PE=3 SV=1
Length = 85
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 64/82 (78%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
ATKK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G+ VGMG+DHTL+
Sbjct: 1 MATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGNNVGMGRDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHV 86
A +G+VKFE RK+V +
Sbjct: 61 ATADGKVKFEVKGEKSRKYVSI 82
>sp|Q4QM29|RL27_HAEI8 50S ribosomal protein L27 OS=Haemophilus influenzae (strain
86-028NP) GN=rpmA PE=3 SV=1
Length = 85
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 64/82 (78%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
ATKK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G+ VGMG+DHTL+
Sbjct: 1 MATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGNNVGMGRDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHV 86
A +G+VKFE RK+V +
Sbjct: 61 ATADGKVKFEVKGEKSRKYVSI 82
>sp|Q47VL3|RL27_COLP3 50S ribosomal protein L27 OS=Colwellia psychrerythraea (strain
34H / ATCC BAA-681) GN=rpmA PE=3 SV=1
Length = 85
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 64/82 (78%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
A KK AGST+NGRDS+ K LGVK+FGGE V+ GNIIVRQRGTRFH G +G+GKDHTL+
Sbjct: 1 MAHKKAAGSTRNGRDSEAKRLGVKRFGGESVLAGNIIVRQRGTRFHAGSNMGIGKDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHV 86
AL +G+V+FE RK+V +
Sbjct: 61 ALSDGKVQFEVKGPKSRKFVSI 82
>sp|Q11CP4|RL27_MESSB 50S ribosomal protein L27 OS=Mesorhizobium sp. (strain BNC1)
GN=rpmA PE=3 SV=1
Length = 89
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Query: 6 ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLYA 65
A KK GS++NGRDS+ K LGVKKFGGE V+ GNII+RQRGT++HPG VGMGKDHTL+A
Sbjct: 2 AHKKAGGSSRNGRDSESKRLGVKKFGGEAVLAGNIIIRQRGTKWHPGANVGMGKDHTLFA 61
Query: 66 LKEGRVKFEKHKLSGRKWVHVEP 88
L+ G V F K K +GR +V V P
Sbjct: 62 LQAGAVSFAK-KANGRTYVSVNP 83
>sp|Q65S55|RL27_MANSM 50S ribosomal protein L27 OS=Mannheimia succiniciproducens
(strain MBEL55E) GN=rpmA PE=3 SV=1
Length = 85
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
ATKK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G VGMG+DHTL+
Sbjct: 1 MATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGSNVGMGRDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHV 86
A +G+VKFE RK+V +
Sbjct: 61 ATADGKVKFEVKGEKSRKYVSI 82
>sp|A6VMT9|RL27_ACTSZ 50S ribosomal protein L27 OS=Actinobacillus succinogenes (strain
ATCC 55618 / 130Z) GN=rpmA PE=3 SV=1
Length = 85
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
ATKK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G VGMG+DHTL+
Sbjct: 1 MATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGSNVGMGRDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHV 86
A +G+VKFE RK+V +
Sbjct: 61 ATADGKVKFEVKGEKSRKYVSI 82
>sp|Q9CNS7|RL27_PASMU 50S ribosomal protein L27 OS=Pasteurella multocida (strain Pm70)
GN=rpmA PE=3 SV=1
Length = 85
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
ATKK GST+NGRDS+ K LGVK+FGGE V+ G+IIVRQRGT+FH G VGMG+DHTL+
Sbjct: 1 MATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGSNVGMGRDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHV 86
A +G+VKFE RK+V +
Sbjct: 61 ATADGKVKFEVKGEKNRKYVSI 82
>sp|Q3SKG3|RL27_THIDA 50S ribosomal protein L27 OS=Thiobacillus denitrificans (strain
ATCC 25259) GN=rpmA PE=3 SV=1
Length = 87
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 65/84 (77%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
A KK GS++NGRDS+ K LGVK+FGG+ V+ GNI+VRQRGT+FHPGD VG+GKDHTL+
Sbjct: 1 MAHKKAGGSSRNGRDSESKRLGVKRFGGQVVLAGNILVRQRGTQFHPGDNVGIGKDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEP 88
A +G VKFE + RK V +EP
Sbjct: 61 AKTDGTVKFEIKGAARRKVVRIEP 84
>sp|B0VEJ5|RL27_ACIBY 50S ribosomal protein L27 OS=Acinetobacter baumannii (strain AYE)
GN=rpmA PE=3 SV=1
Length = 85
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 61/84 (72%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
ATKK GSTKNGRDS PK LGVK +GG+ V GNIIVRQRGT FH G VGMG+DHTL+
Sbjct: 1 MATKKAGGSTKNGRDSNPKMLGVKVYGGQTVTAGNIIVRQRGTEFHAGANVGMGRDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEP 88
A +G VKFE GR++V VE
Sbjct: 61 ATADGVVKFEVKGQFGRRYVKVET 84
>sp|A3M899|RL27_ACIBT 50S ribosomal protein L27 OS=Acinetobacter baumannii (strain ATCC
17978 / NCDC KC 755) GN=rpmA PE=3 SV=1
Length = 85
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 61/84 (72%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
ATKK GSTKNGRDS PK LGVK +GG+ V GNIIVRQRGT FH G VGMG+DHTL+
Sbjct: 1 MATKKAGGSTKNGRDSNPKMLGVKVYGGQTVTAGNIIVRQRGTEFHAGANVGMGRDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEP 88
A +G VKFE GR++V VE
Sbjct: 61 ATADGVVKFEVKGQFGRRYVKVET 84
>sp|B0VSH6|RL27_ACIBS 50S ribosomal protein L27 OS=Acinetobacter baumannii (strain SDF)
GN=rpmA PE=3 SV=1
Length = 85
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 61/84 (72%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
ATKK GSTKNGRDS PK LGVK +GG+ V GNIIVRQRGT FH G VGMG+DHTL+
Sbjct: 1 MATKKAGGSTKNGRDSNPKMLGVKVYGGQTVTAGNIIVRQRGTEFHAGANVGMGRDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEP 88
A +G VKFE GR++V VE
Sbjct: 61 ATADGVVKFEVKGQFGRRYVKVET 84
>sp|B2HXU8|RL27_ACIBC 50S ribosomal protein L27 OS=Acinetobacter baumannii (strain
ACICU) GN=rpmA PE=3 SV=1
Length = 85
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 61/84 (72%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
ATKK GSTKNGRDS PK LGVK +GG+ V GNIIVRQRGT FH G VGMG+DHTL+
Sbjct: 1 MATKKAGGSTKNGRDSNPKMLGVKVYGGQTVTAGNIIVRQRGTEFHAGANVGMGRDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEP 88
A +G VKFE GR++V VE
Sbjct: 61 ATADGVVKFEVKGQFGRRYVKVET 84
>sp|B7I6V8|RL27_ACIB5 50S ribosomal protein L27 OS=Acinetobacter baumannii (strain
AB0057) GN=rpmA PE=3 SV=1
Length = 85
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 61/84 (72%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
ATKK GSTKNGRDS PK LGVK +GG+ V GNIIVRQRGT FH G VGMG+DHTL+
Sbjct: 1 MATKKAGGSTKNGRDSNPKMLGVKVYGGQTVTAGNIIVRQRGTEFHAGANVGMGRDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEP 88
A +G VKFE GR++V VE
Sbjct: 61 ATADGVVKFEVKGQFGRRYVKVET 84
>sp|B7GXH9|RL27_ACIB3 50S ribosomal protein L27 OS=Acinetobacter baumannii (strain
AB307-0294) GN=rpmA PE=3 SV=1
Length = 85
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 61/84 (72%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
ATKK GSTKNGRDS PK LGVK +GG+ V GNIIVRQRGT FH G VGMG+DHTL+
Sbjct: 1 MATKKAGGSTKNGRDSNPKMLGVKVYGGQTVTAGNIIVRQRGTEFHAGANVGMGRDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEP 88
A +G VKFE GR++V VE
Sbjct: 61 ATADGVVKFEVKGQFGRRYVKVET 84
>sp|Q6LV48|RL27_PHOPR 50S ribosomal protein L27 OS=Photobacterium profundum GN=rpmA
PE=3 SV=1
Length = 85
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 63/84 (75%)
Query: 5 WATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLY 64
A KK GST NGRDS+ K LGVK+FGGE V+ GNIIVRQRGT+FH G VG+GKDHTL+
Sbjct: 1 MAHKKAGGSTNNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGTNVGLGKDHTLF 60
Query: 65 ALKEGRVKFEKHKLSGRKWVHVEP 88
AL +G+VKFE RK+V +E
Sbjct: 61 ALTDGKVKFEVKGPKNRKFVTIEA 84
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,272,304
Number of Sequences: 539616
Number of extensions: 2090741
Number of successful extensions: 4378
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3560
Number of HSP's gapped (non-prelim): 823
length of query: 114
length of database: 191,569,459
effective HSP length: 82
effective length of query: 32
effective length of database: 147,320,947
effective search space: 4714270304
effective search space used: 4714270304
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)