Query 033657
Match_columns 114
No_of_seqs 121 out of 1012
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 07:31:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033657.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033657hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3r8s_O 50S ribosomal protein L 100.0 2E-42 6.9E-47 242.3 11.1 97 16-113 20-116 (116)
2 3bbo_Q Ribosomal protein L18; 100.0 7.5E-42 2.6E-46 250.5 6.6 102 11-113 58-161 (161)
3 3v2d_S 50S ribosomal protein L 100.0 1.2E-40 4.1E-45 232.1 8.4 95 12-113 18-112 (112)
4 1ovy_A 50S ribosomal protein L 100.0 8.3E-41 2.9E-45 235.3 6.9 100 11-113 21-120 (120)
5 2zjr_L 50S ribosomal protein L 100.0 4.8E-39 1.6E-43 224.6 2.6 96 11-113 16-114 (114)
6 1vq8_N 50S ribosomal protein L 100.0 5E-35 1.7E-39 218.9 13.1 96 16-113 30-130 (187)
7 3j21_O 50S ribosomal protein L 100.0 5.9E-34 2E-38 215.3 8.3 97 16-113 30-131 (203)
8 2zkr_n 60S ribosomal protein L 100.0 8.7E-29 3E-33 194.9 13.9 96 17-113 47-173 (297)
9 3u5e_D 60S ribosomal protein L 99.9 2.4E-26 8.1E-31 181.2 12.0 96 17-113 47-173 (297)
10 4a17_M RPL5, 60S ribosomal pro 99.9 2.8E-26 9.5E-31 181.0 11.6 97 16-113 46-173 (301)
11 3iz5_Q 60S ribosomal protein L 99.9 4.6E-23 1.6E-27 162.7 7.8 92 18-113 52-173 (304)
12 2xzm_K RPS14E; ribosome, trans 98.1 4.2E-05 1.5E-09 55.2 10.0 98 13-113 23-126 (151)
13 2vqe_K 30S ribosomal protein S 98.0 4.8E-05 1.6E-09 53.5 10.0 90 18-113 16-105 (129)
14 3r8n_K 30S ribosomal protein S 97.9 6.7E-05 2.3E-09 51.9 8.5 88 20-113 8-95 (117)
15 3j20_M 30S ribosomal protein S 97.8 0.00027 9.1E-09 50.2 10.6 93 18-113 14-112 (137)
16 3bbn_K Ribosomal protein S11; 97.8 5E-05 1.7E-09 54.2 6.2 90 18-113 29-118 (140)
17 3u5c_O RP59A, 40S ribosomal pr 97.3 0.00049 1.7E-08 48.8 5.7 98 13-113 9-112 (137)
18 3b09_A Peptidyl-prolyl CIS-tra 76.3 3.5 0.00012 26.5 4.0 34 63-108 30-63 (88)
19 4fnq_A Alpha-galactosidase AGA 74.8 3.5 0.00012 35.5 4.7 40 73-113 351-408 (729)
20 3gv0_A Transcriptional regulat 73.7 11 0.00036 27.1 6.5 46 67-113 112-160 (288)
21 3gyb_A Transcriptional regulat 72.9 7.6 0.00026 27.6 5.5 46 67-113 103-149 (280)
22 1byk_A Protein (trehalose oper 72.6 11 0.00037 26.4 6.3 44 68-112 101-148 (255)
23 2h0a_A TTHA0807, transcription 70.8 13 0.00044 26.1 6.4 45 68-113 100-152 (276)
24 3egc_A Putative ribose operon 70.6 10 0.00035 27.1 5.9 46 67-113 110-158 (291)
25 3d8u_A PURR transcriptional re 69.7 11 0.00039 26.4 5.8 46 67-113 105-153 (275)
26 3miz_A Putative transcriptiona 69.2 10 0.00036 27.2 5.6 46 67-113 116-164 (301)
27 3k4h_A Putative transcriptiona 68.8 12 0.00041 26.6 5.8 46 67-113 116-164 (292)
28 1dbq_A Purine repressor; trans 68.6 12 0.0004 26.6 5.8 45 68-113 112-159 (289)
29 1y81_A Conserved hypothetical 68.5 5.1 0.00018 27.1 3.6 35 74-114 86-120 (138)
30 3clk_A Transcription regulator 68.4 14 0.00046 26.5 6.1 46 67-113 110-158 (290)
31 3g85_A Transcriptional regulat 68.2 11 0.00037 26.8 5.5 46 67-113 112-160 (289)
32 3brq_A HTH-type transcriptiona 68.1 12 0.00041 26.5 5.7 45 68-113 125-172 (296)
33 2h6r_A Triosephosphate isomera 67.7 1.7 6E-05 31.7 1.1 46 69-114 70-115 (219)
34 3cs3_A Sugar-binding transcrip 67.0 12 0.00042 26.5 5.6 46 67-113 103-151 (277)
35 3kke_A LACI family transcripti 66.9 12 0.00041 27.1 5.6 46 67-113 116-164 (303)
36 3ff4_A Uncharacterized protein 66.9 4.9 0.00017 26.9 3.2 35 74-114 75-109 (122)
37 3k9c_A Transcriptional regulat 66.8 16 0.00054 26.2 6.2 46 67-113 111-158 (289)
38 2fep_A Catabolite control prot 66.6 12 0.0004 26.9 5.5 45 68-113 119-167 (289)
39 3hcw_A Maltose operon transcri 66.2 12 0.0004 27.0 5.4 46 67-113 116-164 (295)
40 3qi7_A Putative transcriptiona 66.1 8.4 0.00029 30.9 4.9 46 67-113 141-191 (371)
41 2qu7_A Putative transcriptiona 65.9 13 0.00046 26.4 5.6 45 68-113 108-155 (288)
42 3c3k_A Alanine racemase; struc 65.9 12 0.00041 26.8 5.3 45 68-113 110-157 (285)
43 3rot_A ABC sugar transporter, 65.7 12 0.00042 26.9 5.4 46 67-113 113-163 (297)
44 2d59_A Hypothetical protein PH 64.3 5.3 0.00018 27.0 3.0 36 73-114 93-128 (144)
45 3tb6_A Arabinose metabolism tr 64.3 15 0.0005 26.1 5.5 47 67-113 122-169 (298)
46 3m0z_A Putative aldolase; MCSG 64.2 15 0.0005 28.1 5.6 75 30-112 115-189 (249)
47 3huu_A Transcription regulator 64.0 13 0.00043 26.9 5.2 46 67-113 129-177 (305)
48 3dbi_A Sugar-binding transcrip 64.0 14 0.00049 27.1 5.6 46 67-113 166-214 (338)
49 2fb6_A Conserved hypothetical 63.9 14 0.00048 24.4 5.0 52 62-113 18-74 (117)
50 3qk7_A Transcriptional regulat 63.1 12 0.0004 27.0 4.9 46 67-113 111-159 (294)
51 3e61_A Putative transcriptiona 62.4 12 0.0004 26.5 4.7 47 66-113 106-155 (277)
52 2duw_A Putative COA-binding pr 62.4 4.3 0.00015 27.6 2.2 34 75-114 88-121 (145)
53 3snr_A Extracellular ligand-bi 62.3 17 0.00059 26.3 5.7 47 67-113 120-166 (362)
54 3tev_A Glycosyl hyrolase, fami 62.2 3.6 0.00012 32.6 2.1 54 58-111 102-173 (351)
55 2o20_A Catabolite control prot 61.7 18 0.00062 26.5 5.8 45 68-113 166-213 (332)
56 3bbl_A Regulatory protein of L 61.5 15 0.00051 26.3 5.2 43 70-113 113-158 (287)
57 3ctp_A Periplasmic binding pro 61.4 17 0.00059 26.6 5.6 44 69-113 159-205 (330)
58 3gbv_A Putative LACI-family tr 61.3 16 0.00055 25.9 5.3 47 67-113 118-172 (304)
59 2rgy_A Transcriptional regulat 61.2 17 0.00059 26.0 5.5 45 68-113 114-161 (290)
60 3noy_A 4-hydroxy-3-methylbut-2 61.1 5.8 0.0002 32.0 3.0 52 61-113 68-136 (366)
61 1qpz_A PURA, protein (purine n 60.5 17 0.00059 26.8 5.5 44 69-113 164-210 (340)
62 2fvy_A D-galactose-binding per 59.9 20 0.00067 25.6 5.6 52 61-113 111-173 (309)
63 2hsg_A Glucose-resistance amyl 59.9 16 0.00056 26.7 5.3 46 67-113 162-211 (332)
64 2w4l_A DCMP deaminse, deoxycyt 59.7 17 0.00056 25.9 5.1 40 73-113 110-149 (178)
65 2q28_A Oxalyl-COA decarboxylas 59.5 9 0.00031 31.2 4.0 41 68-114 9-49 (564)
66 1iuk_A Hypothetical protein TT 59.5 6.5 0.00022 26.5 2.7 35 74-114 87-121 (140)
67 3e3m_A Transcriptional regulat 59.0 16 0.00055 27.1 5.1 46 67-113 172-221 (355)
68 3o74_A Fructose transport syst 58.9 16 0.00054 25.5 4.8 46 67-113 105-153 (272)
69 2c31_A Oxalyl-COA decarboxylas 58.8 9.5 0.00032 31.1 4.0 41 68-114 11-51 (568)
70 2yb1_A Amidohydrolase; HET: AM 58.1 13 0.00045 27.8 4.5 39 73-114 22-60 (292)
71 3m6y_A 4-hydroxy-2-oxoglutarat 57.9 16 0.00053 28.3 4.8 38 75-112 175-212 (275)
72 4evq_A Putative ABC transporte 57.9 22 0.00077 26.0 5.7 46 67-113 136-182 (375)
73 3uw2_A Phosphoglucomutase/phos 57.6 32 0.0011 28.0 7.0 58 54-113 34-93 (485)
74 3h5t_A Transcriptional regulat 57.3 16 0.00055 27.2 4.9 47 67-113 174-239 (366)
75 3sg0_A Extracellular ligand-bi 57.1 24 0.00082 25.9 5.8 46 67-113 144-190 (386)
76 3trh_A Phosphoribosylaminoimid 56.9 41 0.0014 24.2 6.7 42 72-114 24-65 (169)
77 3e38_A Two-domain protein cont 56.6 14 0.00047 29.0 4.5 42 73-114 39-89 (343)
78 2yxo_A Histidinol phosphatase; 56.4 20 0.0007 25.6 5.2 22 72-93 20-41 (267)
79 3eya_A Pyruvate dehydrogenase 56.4 12 0.00041 30.4 4.3 41 68-114 4-45 (549)
80 4grd_A N5-CAIR mutase, phospho 56.3 34 0.0012 24.7 6.2 39 74-114 32-71 (173)
81 3hut_A Putative branched-chain 56.2 20 0.00069 26.2 5.2 46 68-113 125-170 (358)
82 2hc5_A ORF 99, hypothetical pr 55.8 22 0.00077 23.8 4.9 31 14-44 53-83 (117)
83 3o1i_D Periplasmic protein TOR 54.9 14 0.00048 26.3 4.0 46 67-113 116-169 (304)
84 4fe7_A Xylose operon regulator 54.4 29 0.00098 26.6 6.0 45 67-112 124-173 (412)
85 1p5d_X PMM, phosphomannomutase 54.2 37 0.0013 27.1 6.8 58 54-113 20-79 (463)
86 3lq1_A 2-succinyl-5-enolpyruvy 53.7 17 0.00057 29.8 4.7 45 64-114 8-53 (578)
87 3l49_A ABC sugar (ribose) tran 53.0 26 0.00087 24.8 5.2 46 67-113 108-159 (291)
88 3kjx_A Transcriptional regulat 52.9 13 0.00045 27.4 3.7 45 68-113 171-219 (344)
89 3lp6_A Phosphoribosylaminoimid 52.1 64 0.0022 23.3 7.3 57 41-114 10-66 (174)
90 1ovm_A Indole-3-pyruvate decar 51.6 17 0.00057 29.4 4.4 40 68-113 6-46 (552)
91 3o0f_A Putative metal-dependen 51.4 19 0.00063 27.8 4.4 40 72-114 32-71 (301)
92 2yfo_A Alpha-galactosidase-suc 51.2 13 0.00044 32.0 3.8 40 73-113 351-408 (720)
93 3kuu_A Phosphoribosylaminoimid 51.2 37 0.0013 24.5 5.7 57 41-114 15-71 (174)
94 4eyg_A Twin-arginine transloca 50.8 34 0.0012 24.9 5.7 46 67-113 124-170 (368)
95 3ors_A N5-carboxyaminoimidazol 50.7 48 0.0016 23.6 6.2 57 41-114 6-62 (163)
96 3fwz_A Inner membrane protein 50.5 25 0.00085 22.9 4.5 23 67-89 16-38 (140)
97 4h41_A Putative alpha-L-fucosi 50.2 15 0.0005 29.1 3.7 39 74-113 60-116 (340)
98 3jvd_A Transcriptional regulat 49.9 28 0.00097 25.6 5.1 45 67-112 159-206 (333)
99 2uz1_A Benzaldehyde lyase; thi 49.8 12 0.0004 30.5 3.2 41 68-114 5-45 (563)
100 3g1w_A Sugar ABC transporter; 49.4 29 0.001 24.7 5.0 46 67-113 110-159 (305)
101 2pgn_A Cyclohexane-1,2-dione h 49.2 21 0.00073 29.2 4.7 41 68-114 5-47 (589)
102 2csu_A 457AA long hypothetical 48.7 16 0.00054 29.5 3.8 43 71-114 78-125 (457)
103 2yv1_A Succinyl-COA ligase [AD 47.9 24 0.00083 26.7 4.6 42 71-114 84-125 (294)
104 4feg_A Pyruvate oxidase; carba 47.5 21 0.00072 29.4 4.4 41 68-114 12-54 (603)
105 2vk8_A Pyruvate decarboxylase 47.3 17 0.00058 29.5 3.8 41 68-114 5-46 (563)
106 2vbf_A Branched-chain alpha-ke 47.1 21 0.00073 29.0 4.4 41 67-113 25-66 (570)
107 3ksm_A ABC-type sugar transpor 46.3 21 0.00073 24.8 3.8 51 62-113 107-161 (276)
108 3hs3_A Ribose operon repressor 46.2 27 0.00094 24.7 4.4 44 68-113 109-155 (277)
109 2rjo_A Twin-arginine transloca 45.9 35 0.0012 24.9 5.0 44 69-113 121-170 (332)
110 3hg3_A Alpha-galactosidase A; 45.9 40 0.0014 27.2 5.7 52 61-113 33-100 (404)
111 3llv_A Exopolyphosphatase-rela 45.6 49 0.0017 21.0 5.3 22 68-89 16-37 (141)
112 3i09_A Periplasmic branched-ch 45.5 46 0.0016 24.5 5.7 45 68-113 126-171 (375)
113 2x7j_A 2-succinyl-5-enolpyruvy 45.4 17 0.00059 29.9 3.6 44 65-114 29-73 (604)
114 1hjs_A Beta-1,4-galactanase; 4 45.1 26 0.00089 26.9 4.4 41 74-114 33-77 (332)
115 2wvg_A PDC, pyruvate decarboxy 45.1 18 0.00063 29.4 3.7 39 69-113 5-44 (568)
116 3lop_A Substrate binding perip 45.0 38 0.0013 24.8 5.2 44 69-113 128-172 (364)
117 2zxd_A Alpha-L-fucosidase, put 44.8 29 0.00098 28.3 4.7 43 71-113 108-168 (455)
118 1pea_A Amidase operon; gene re 44.5 37 0.0013 25.2 5.1 44 69-113 127-171 (385)
119 2wvv_A Alpha-L-fucosidase; alp 44.3 22 0.00077 28.8 4.0 43 71-113 81-141 (450)
120 2h3h_A Sugar ABC transporter, 44.3 32 0.0011 24.8 4.6 49 62-113 105-156 (313)
121 3tha_A Tryptophan synthase alp 44.2 15 0.00051 27.8 2.8 40 71-114 106-145 (252)
122 1jye_A Lactose operon represso 43.8 40 0.0014 24.9 5.1 45 68-113 165-212 (349)
123 1zy9_A Alpha-galactosidase; TM 43.7 21 0.00073 29.8 3.9 42 71-113 215-266 (564)
124 3f4w_A Putative hexulose 6 pho 43.3 47 0.0016 23.0 5.2 39 72-113 68-106 (211)
125 2yv2_A Succinyl-COA synthetase 42.9 33 0.0011 26.0 4.6 42 71-114 85-126 (297)
126 1ozh_A ALS, acetolactate synth 42.7 15 0.00053 29.9 2.9 40 68-113 12-51 (566)
127 2xn2_A Alpha-galactosidase; hy 42.6 29 0.001 29.8 4.7 41 72-113 354-412 (732)
128 2x41_A Beta-glucosidase; hydro 42.4 24 0.00083 30.2 4.1 54 58-111 88-158 (721)
129 1weh_A Conserved hypothetical 42.3 61 0.0021 22.5 5.7 40 63-112 19-58 (171)
130 3ipc_A ABC transporter, substr 42.0 43 0.0015 24.3 5.0 45 68-113 123-169 (356)
131 3bil_A Probable LACI-family tr 41.9 59 0.002 24.0 5.8 42 69-111 171-215 (348)
132 1ybh_A Acetolactate synthase, 41.8 35 0.0012 27.9 4.9 41 68-114 13-54 (590)
133 1oi7_A Succinyl-COA synthetase 41.7 35 0.0012 25.7 4.6 42 71-114 78-119 (288)
134 3hww_A 2-succinyl-5-enolpyruvy 41.5 27 0.00093 28.4 4.2 41 67-113 8-49 (556)
135 1xmp_A PURE, phosphoribosylami 41.0 73 0.0025 22.9 5.9 57 41-114 14-70 (170)
136 3h5o_A Transcriptional regulat 40.4 50 0.0017 24.2 5.2 44 67-111 163-208 (339)
137 3n0w_A ABC branched chain amin 40.2 59 0.002 24.0 5.6 45 68-113 128-173 (379)
138 2vbi_A Pyruvate decarboxylase; 40.1 19 0.00064 29.3 3.0 40 68-113 4-44 (566)
139 2dri_A D-ribose-binding protei 40.0 56 0.0019 22.9 5.3 49 62-113 105-156 (271)
140 1usg_A Leucine-specific bindin 39.7 47 0.0016 23.9 4.9 43 70-113 125-169 (346)
141 1wek_A Hypothetical protein TT 39.0 61 0.0021 23.6 5.4 40 63-112 55-94 (217)
142 2qul_A D-tagatose 3-epimerase; 38.9 57 0.002 23.1 5.2 41 73-113 22-63 (290)
143 1qtw_A Endonuclease IV; DNA re 38.9 55 0.0019 23.1 5.1 41 73-113 17-63 (285)
144 4do4_A Alpha-N-acetylgalactosa 38.9 46 0.0016 25.5 4.9 50 63-113 35-99 (400)
145 2ekc_A AQ_1548, tryptophan syn 38.7 42 0.0014 24.7 4.6 39 71-113 112-150 (262)
146 2iks_A DNA-binding transcripti 38.4 49 0.0017 23.5 4.8 43 68-111 124-169 (293)
147 3brs_A Periplasmic binding pro 38.3 51 0.0018 23.1 4.8 44 68-112 115-163 (289)
148 3abz_A Beta-glucosidase I; gly 38.0 34 0.0012 30.1 4.4 53 58-111 71-141 (845)
149 3cc1_A BH1870 protein, putativ 37.8 72 0.0025 25.4 6.1 53 60-113 25-110 (433)
150 1yx1_A Hypothetical protein PA 37.8 32 0.0011 24.4 3.7 40 73-113 89-128 (264)
151 2nyt_A Probable C->U-editing e 37.7 47 0.0016 24.0 4.5 41 73-113 97-142 (190)
152 2fqx_A Membrane lipoprotein TM 37.5 64 0.0022 23.8 5.4 50 61-112 108-160 (318)
153 3oow_A Phosphoribosylaminoimid 36.7 97 0.0033 22.1 6.0 42 72-114 23-64 (166)
154 3nav_A Tryptophan synthase alp 36.6 25 0.00085 26.6 3.0 39 71-113 115-153 (271)
155 3tva_A Xylose isomerase domain 36.5 59 0.002 23.2 5.0 40 74-113 27-67 (290)
156 3rg8_A Phosphoribosylaminoimid 36.5 99 0.0034 21.9 6.0 39 73-113 21-61 (159)
157 3mi6_A Alpha-galactosidase; NE 36.3 40 0.0014 29.4 4.5 42 71-113 350-409 (745)
158 1u11_A PURE (N5-carboxyaminoim 36.3 1.2E+02 0.004 22.0 6.4 57 41-114 24-80 (182)
159 2fp4_A Succinyl-COA ligase [GD 36.2 38 0.0013 25.8 4.0 44 69-114 83-127 (305)
160 3d02_A Putative LACI-type tran 35.8 1.1E+02 0.0038 21.4 6.4 43 67-110 110-157 (303)
161 3uug_A Multiple sugar-binding 35.8 69 0.0023 23.0 5.2 48 61-109 107-160 (330)
162 4fn4_A Short chain dehydrogena 35.3 61 0.0021 23.9 5.0 42 66-112 16-57 (254)
163 2oxn_A Beta-hexosaminidase; TI 35.0 47 0.0016 26.0 4.4 51 61-111 87-155 (340)
164 1uas_A Alpha-galactosidase; TI 34.8 36 0.0012 26.3 3.7 52 61-113 23-90 (362)
165 2nu8_A Succinyl-COA ligase [AD 33.8 57 0.0019 24.4 4.6 42 71-114 78-119 (288)
166 2qw5_A Xylose isomerase-like T 33.6 96 0.0033 22.8 5.9 40 73-112 36-80 (335)
167 3m9w_A D-xylose-binding peripl 33.4 78 0.0027 22.6 5.2 42 67-109 107-152 (313)
168 3i3w_A Phosphoglucosamine muta 33.4 1.3E+02 0.0045 23.9 6.9 52 60-113 18-72 (443)
169 3vnd_A TSA, tryptophan synthas 33.3 30 0.001 26.1 3.0 39 71-113 113-151 (267)
170 3kws_A Putative sugar isomeras 33.3 52 0.0018 23.5 4.2 38 73-113 43-80 (287)
171 2ftp_A Hydroxymethylglutaryl-C 33.1 57 0.002 24.5 4.6 41 72-113 87-140 (302)
172 2x7v_A Probable endonuclease 4 33.1 76 0.0026 22.4 5.1 40 74-113 18-63 (287)
173 3osu_A 3-oxoacyl-[acyl-carrier 32.9 97 0.0033 21.7 5.6 40 67-110 14-53 (246)
174 2zvr_A Uncharacterized protein 32.7 60 0.002 23.3 4.5 39 73-113 46-84 (290)
175 1vq2_A DCMP deaminase, deoxycy 32.6 18 0.00062 25.7 1.6 36 73-113 135-171 (193)
176 1o4v_A Phosphoribosylaminoimid 32.4 96 0.0033 22.5 5.4 57 41-114 16-72 (183)
177 3bmx_A Uncharacterized lipopro 32.2 38 0.0013 28.6 3.7 53 59-111 146-216 (642)
178 3lkb_A Probable branched-chain 32.1 69 0.0023 23.7 4.8 45 68-113 128-174 (392)
179 3lmz_A Putative sugar isomeras 32.0 1E+02 0.0034 21.7 5.6 41 72-113 34-77 (257)
180 8abp_A L-arabinose-binding pro 32.0 52 0.0018 23.3 4.0 51 61-111 109-164 (306)
181 1vp8_A Hypothetical protein AF 32.0 44 0.0015 24.7 3.6 45 60-113 25-69 (201)
182 3nkl_A UDP-D-quinovosamine 4-d 31.7 59 0.002 20.7 3.9 35 77-113 61-95 (141)
183 1owl_A Photolyase, deoxyribodi 31.5 78 0.0027 25.5 5.3 43 70-113 81-124 (484)
184 4iin_A 3-ketoacyl-acyl carrier 31.5 1E+02 0.0035 21.9 5.6 40 67-110 39-78 (271)
185 2ze3_A DFA0005; organic waste 31.3 71 0.0024 24.2 4.8 38 75-113 99-146 (275)
186 2hvw_A Deoxycytidylate deamina 31.3 32 0.0011 24.6 2.7 36 73-113 136-171 (184)
187 2pan_A Glyoxylate carboligase; 31.2 53 0.0018 27.0 4.3 40 68-113 28-68 (616)
188 1tuo_A Putative phosphomannomu 31.2 1.7E+02 0.0057 23.3 7.2 58 54-113 20-79 (464)
189 2cw6_A Hydroxymethylglutaryl-C 31.0 64 0.0022 24.1 4.5 40 73-113 85-137 (298)
190 2fn9_A Ribose ABC transporter, 31.0 57 0.0019 22.9 4.0 51 62-113 107-165 (290)
191 4acy_A Endo-alpha-mannosidase; 30.8 28 0.00097 27.7 2.6 39 74-113 109-149 (382)
192 4g81_D Putative hexonate dehyd 30.7 60 0.0021 24.0 4.2 42 66-112 18-59 (255)
193 2hnh_A DNA polymerase III alph 30.6 47 0.0016 29.5 4.1 41 71-114 25-65 (910)
194 1gud_A ALBP, D-allose-binding 30.5 58 0.002 23.1 4.0 48 62-113 114-167 (288)
195 3txv_A Probable tagatose 6-pho 30.5 1.3E+02 0.0045 24.7 6.5 48 62-110 105-163 (450)
196 3ewb_X 2-isopropylmalate synth 30.4 85 0.0029 23.6 5.1 50 62-112 115-165 (293)
197 1fob_A Beta-1,4-galactanase; B 30.4 55 0.0019 25.0 4.1 41 74-114 33-77 (334)
198 1t9b_A Acetolactate synthase, 30.1 36 0.0012 28.7 3.2 41 67-113 82-123 (677)
199 4b4k_A N5-carboxyaminoimidazol 30.1 90 0.0031 22.6 4.9 41 73-114 41-81 (181)
200 1fd9_A Protein (macrophage inf 30.1 54 0.0018 23.8 3.8 21 63-83 12-32 (213)
201 3l6u_A ABC-type sugar transpor 30.0 30 0.001 24.4 2.4 52 62-113 112-169 (293)
202 1ydn_A Hydroxymethylglutaryl-C 30.0 60 0.002 24.1 4.2 40 74-113 85-136 (295)
203 3zyz_A Beta-D-glucoside glucoh 29.8 45 0.0015 28.6 3.8 54 58-111 82-153 (713)
204 3pdk_A Phosphoglucosamine muta 29.8 1.4E+02 0.0049 23.9 6.6 58 54-113 32-92 (469)
205 3ksu_A 3-oxoacyl-acyl carrier 29.6 93 0.0032 22.2 5.1 42 67-110 21-62 (262)
206 1w0m_A TIM, triosephosphate is 29.5 20 0.0007 26.5 1.4 46 68-114 72-118 (226)
207 1hg3_A Triosephosphate isomera 29.2 19 0.00066 26.6 1.2 46 68-114 75-121 (225)
208 3ckm_A YRAM (HI1655), LPOA; pe 29.0 48 0.0016 24.3 3.5 44 69-113 111-155 (327)
209 3lyl_A 3-oxoacyl-(acyl-carrier 28.7 1.2E+02 0.004 21.1 5.4 39 67-110 15-53 (247)
210 3td9_A Branched chain amino ac 28.7 1.5E+02 0.005 21.5 6.1 46 68-113 134-181 (366)
211 3dmy_A Protein FDRA; predicted 28.5 60 0.002 26.7 4.2 40 72-114 51-90 (480)
212 3qxb_A Putative xylose isomera 28.5 1.2E+02 0.004 22.1 5.5 41 73-113 40-86 (316)
213 3ble_A Citramalate synthase fr 28.5 93 0.0032 23.9 5.1 34 74-107 175-208 (337)
214 2jwk_A Protein TOLR; periplasm 28.4 87 0.003 17.9 6.0 21 92-112 54-74 (74)
215 2x7x_A Sensor protein; transfe 28.3 51 0.0017 23.9 3.5 44 69-113 113-162 (325)
216 3a5v_A Alpha-galactosidase; be 27.9 81 0.0028 24.8 4.7 52 61-113 23-90 (397)
217 4gqr_A Pancreatic alpha-amylas 27.8 91 0.0031 23.8 5.0 47 68-114 23-94 (496)
218 3qc0_A Sugar isomerase; TIM ba 27.7 46 0.0016 23.3 3.0 39 73-113 23-61 (275)
219 2ioy_A Periplasmic sugar-bindi 27.5 71 0.0024 22.5 4.0 44 69-113 108-157 (283)
220 1v5e_A Pyruvate oxidase; oxido 27.4 22 0.00076 29.2 1.4 40 68-113 5-46 (590)
221 3sju_A Keto reductase; short-c 27.3 1E+02 0.0036 22.1 5.0 39 67-110 34-72 (279)
222 2cw6_A Hydroxymethylglutaryl-C 27.3 1E+02 0.0035 23.0 5.1 22 62-83 115-136 (298)
223 1jx6_A LUXP protein; protein-l 27.3 1E+02 0.0036 22.2 5.0 43 68-111 159-205 (342)
224 1tg7_A Beta-galactosidase; TIM 27.2 59 0.002 29.1 4.2 43 72-114 40-92 (971)
225 2h4a_A YRAM (HI1655); perplasm 27.1 53 0.0018 24.8 3.5 43 70-113 110-153 (325)
226 3u9l_A 3-oxoacyl-[acyl-carrier 26.9 1.3E+02 0.0045 22.4 5.7 43 67-110 15-58 (324)
227 2gfq_A UPF0204 protein PH0006; 26.5 1E+02 0.0034 23.9 4.9 39 74-114 253-294 (298)
228 3p6l_A Sugar phosphate isomera 26.4 1.4E+02 0.0048 20.8 5.5 41 73-113 27-79 (262)
229 4da9_A Short-chain dehydrogena 26.4 1.4E+02 0.0048 21.4 5.6 41 66-110 38-78 (280)
230 3c85_A Putative glutathione-re 26.3 72 0.0025 21.3 3.7 23 67-89 48-71 (183)
231 2nxw_A Phenyl-3-pyruvate decar 26.3 71 0.0024 25.9 4.3 39 67-111 21-59 (565)
232 1gvf_A Tagatose-bisphosphate a 26.2 1.2E+02 0.004 23.2 5.3 40 72-112 88-130 (286)
233 3o21_A Glutamate receptor 3; p 26.2 1.1E+02 0.0036 23.1 5.0 44 69-113 117-160 (389)
234 1szn_A Alpha-galactosidase; (b 26.2 74 0.0025 25.3 4.2 52 61-113 26-93 (417)
235 1q6z_A BFD, BFDC, benzoylforma 26.1 30 0.001 27.8 1.9 38 69-113 4-41 (528)
236 3sx6_A Sulfide-quinone reducta 25.9 1.2E+02 0.0041 23.3 5.4 51 64-114 165-226 (437)
237 3gza_A Putative alpha-L-fucosi 25.7 1E+02 0.0035 25.0 5.1 43 71-113 62-125 (443)
238 3i6i_A Putative leucoanthocyan 25.7 1.4E+02 0.0048 21.8 5.6 25 67-92 20-44 (346)
239 4ad1_A Glycosyl hydrolase fami 25.6 55 0.0019 25.8 3.4 39 74-113 110-151 (380)
240 2ood_A BLR3880 protein; PSI-II 25.5 1.2E+02 0.0041 23.5 5.4 48 63-113 113-160 (475)
241 3tfo_A Putative 3-oxoacyl-(acy 25.5 1.3E+02 0.0046 21.6 5.3 40 66-110 13-52 (264)
242 4e8d_A Glycosyl hydrolase, fam 25.5 75 0.0025 27.0 4.3 43 72-114 36-88 (595)
243 2qjg_A Putative aldolase MJ040 25.5 1E+02 0.0036 22.1 4.7 15 69-83 133-147 (273)
244 2qiw_A PEP phosphonomutase; st 25.3 76 0.0026 23.7 4.0 41 72-113 97-147 (255)
245 1n13_A PVLARGDC, pyruvoyl-depe 25.2 46 0.0016 19.5 2.1 17 96-112 28-44 (52)
246 3i1j_A Oxidoreductase, short c 25.1 1.4E+02 0.0048 20.6 5.2 40 66-110 23-62 (247)
247 3sc4_A Short chain dehydrogena 25.1 1.1E+02 0.0038 22.1 4.8 43 67-110 19-64 (285)
248 1np7_A DNA photolyase; protein 25.1 78 0.0027 25.4 4.3 42 71-113 90-132 (489)
249 3hsy_A Glutamate receptor 2; l 25.0 1.5E+02 0.0051 22.0 5.6 44 69-113 108-151 (376)
250 3v2g_A 3-oxoacyl-[acyl-carrier 24.9 1.5E+02 0.0053 21.2 5.6 41 66-110 40-80 (271)
251 3tjr_A Short chain dehydrogena 24.9 1.4E+02 0.0047 21.8 5.3 40 66-110 40-79 (301)
252 1wqa_A Phospho-sugar mutase; a 24.6 2.4E+02 0.0082 22.2 7.0 58 54-113 11-72 (455)
253 2zko_A NS1, NS1A, non-structur 24.5 73 0.0025 19.6 3.0 20 60-79 54-73 (73)
254 3cqj_A L-ribulose-5-phosphate 24.5 1.6E+02 0.0056 20.9 5.6 40 74-113 36-82 (295)
255 2ywl_A Thioredoxin reductase r 24.5 1.5E+02 0.0051 19.3 5.9 45 68-113 11-73 (180)
256 3is3_A 17BETA-hydroxysteroid d 24.3 1.6E+02 0.0056 20.8 5.6 41 66-110 27-67 (270)
257 3zyy_X Iron-sulfur cluster bin 24.3 1.5E+02 0.0051 25.3 6.0 40 15-54 203-242 (631)
258 3obe_A Sugar phosphate isomera 24.2 82 0.0028 23.1 4.0 41 73-113 41-92 (305)
259 3ftp_A 3-oxoacyl-[acyl-carrier 24.2 1.5E+02 0.005 21.3 5.3 40 66-110 37-76 (270)
260 3t7c_A Carveol dehydrogenase; 24.2 1.7E+02 0.0057 21.2 5.7 44 66-110 37-88 (299)
261 3h7a_A Short chain dehydrogena 24.1 1.3E+02 0.0044 21.3 4.9 39 67-110 17-55 (252)
262 3awd_A GOX2181, putative polyo 24.1 1.6E+02 0.0053 20.4 5.3 25 66-91 22-46 (260)
263 3s55_A Putative short-chain de 24.1 1.8E+02 0.0061 20.7 5.7 25 66-91 19-43 (281)
264 2z0f_A Putative phosphoglucomu 24.1 1.5E+02 0.0053 23.9 5.9 53 59-113 38-93 (524)
265 4dmm_A 3-oxoacyl-[acyl-carrier 24.0 1.7E+02 0.0057 20.9 5.6 40 67-110 38-77 (269)
266 1nvm_A HOA, 4-hydroxy-2-oxoval 23.7 77 0.0026 24.3 3.8 41 71-113 96-136 (345)
267 2hq1_A Glucose/ribitol dehydro 23.7 1.5E+02 0.0052 20.3 5.2 25 67-91 15-39 (247)
268 3i45_A Twin-arginine transloca 23.6 1.7E+02 0.0058 21.5 5.7 47 66-113 126-175 (387)
269 3ucx_A Short chain dehydrogena 23.5 1.6E+02 0.0054 20.8 5.3 38 68-110 22-59 (264)
270 3ues_A Alpha-1,3/4-fucosidase; 23.5 1.2E+02 0.0042 24.7 5.2 43 71-113 65-128 (478)
271 1ydo_A HMG-COA lyase; TIM-barr 23.4 78 0.0027 24.0 3.8 50 62-112 116-172 (307)
272 3l23_A Sugar phosphate isomera 23.3 88 0.003 22.9 4.0 41 73-113 34-75 (303)
273 2f7l_A 455AA long hypothetical 23.3 2.1E+02 0.0071 22.6 6.4 56 54-113 11-68 (455)
274 3pxx_A Carveol dehydrogenase; 23.2 1.9E+02 0.0065 20.4 5.7 22 67-88 20-41 (287)
275 3aam_A Endonuclease IV, endoiv 23.1 1.2E+02 0.0041 21.3 4.6 38 74-111 20-63 (270)
276 2jah_A Clavulanic acid dehydro 23.0 1.7E+02 0.0057 20.5 5.3 39 67-110 17-55 (247)
277 3tvs_A Cryptochrome-1; circadi 22.7 80 0.0028 26.0 3.9 42 71-113 89-131 (538)
278 3qiv_A Short-chain dehydrogena 22.6 1.7E+02 0.0056 20.3 5.2 39 66-109 18-56 (253)
279 3ngf_A AP endonuclease, family 22.6 94 0.0032 22.0 3.9 37 73-113 28-64 (269)
280 1u3d_A Cryptochrome 1 apoprote 22.5 97 0.0033 25.0 4.4 44 70-113 90-133 (509)
281 3jr2_A Hexulose-6-phosphate sy 22.5 1.5E+02 0.0052 20.7 5.0 40 71-113 73-112 (218)
282 2isw_A Putative fructose-1,6-b 22.3 1.5E+02 0.0051 23.2 5.2 40 72-112 89-131 (323)
283 3fy4_A 6-4 photolyase; DNA rep 22.3 81 0.0028 26.1 3.9 43 70-113 92-135 (537)
284 1rrm_A Lactaldehyde reductase; 22.2 1.7E+02 0.0058 22.4 5.6 46 69-114 47-92 (386)
285 1id1_A Putative potassium chan 22.2 1.6E+02 0.0056 18.9 5.8 23 67-89 12-34 (153)
286 1rcu_A Conserved hypothetical 22.1 1.8E+02 0.0063 20.7 5.4 40 63-112 44-83 (195)
287 3uve_A Carveol dehydrogenase ( 22.1 1.8E+02 0.006 20.8 5.4 23 67-89 21-43 (286)
288 3tsc_A Putative oxidoreductase 22.0 2E+02 0.0068 20.4 5.6 22 67-88 21-42 (277)
289 3na5_A Phosphoglucomutase; iso 22.0 2.2E+02 0.0074 23.5 6.5 52 60-113 79-133 (570)
290 1qyc_A Phenylcoumaran benzylic 21.9 1.4E+02 0.0048 21.1 4.8 24 68-92 15-38 (308)
291 3oec_A Carveol dehydrogenase ( 21.7 2E+02 0.0068 21.1 5.7 22 67-88 56-77 (317)
292 3l9w_A Glutathione-regulated p 21.6 1.1E+02 0.0039 24.0 4.5 23 67-89 13-35 (413)
293 3d3a_A Beta-galactosidase; pro 21.6 84 0.0029 26.6 3.9 44 71-114 40-93 (612)
294 3vni_A Xylose isomerase domain 21.6 1.4E+02 0.0049 21.1 4.8 40 73-113 22-63 (294)
295 2fiq_A Putative tagatose 6-pho 21.5 2.3E+02 0.0079 22.9 6.4 30 62-92 98-127 (420)
296 3ble_A Citramalate synthase fr 21.5 93 0.0032 23.9 3.9 40 73-113 101-153 (337)
297 1m65_A Hypothetical protein YC 21.5 33 0.0011 24.1 1.2 21 72-92 22-42 (245)
298 3slk_A Polyketide synthase ext 21.5 1.4E+02 0.0048 25.6 5.3 45 67-112 540-585 (795)
299 3og2_A Beta-galactosidase; TIM 21.4 78 0.0027 28.7 3.8 43 72-114 60-112 (1003)
300 2zds_A Putative DNA-binding pr 21.4 1.6E+02 0.0055 21.3 5.1 41 73-113 20-67 (340)
301 3q94_A Fructose-bisphosphate a 21.4 1.1E+02 0.0037 23.5 4.2 39 73-112 95-136 (288)
302 1cxq_A Avian sarcoma virus int 21.4 1.7E+02 0.0059 18.8 9.2 41 6-46 1-45 (162)
303 3rkr_A Short chain oxidoreduct 21.3 1.9E+02 0.0063 20.4 5.3 40 66-110 38-77 (262)
304 4f06_A Extracellular ligand-bi 21.3 1.6E+02 0.0056 21.6 5.2 46 67-113 124-170 (371)
305 3gaf_A 7-alpha-hydroxysteroid 21.3 1.4E+02 0.0048 21.1 4.6 39 67-110 22-60 (256)
306 3pgx_A Carveol dehydrogenase; 21.2 1.9E+02 0.0064 20.6 5.4 22 67-88 25-46 (280)
307 3f5o_A Thioesterase superfamil 21.2 81 0.0028 20.4 3.1 24 26-49 112-135 (148)
308 3sql_A Glycosyl hydrolase fami 21.1 68 0.0023 26.8 3.2 48 64-111 125-190 (535)
309 2q02_A Putative cytoplasmic pr 21.0 1.8E+02 0.0061 20.2 5.1 41 73-113 24-67 (272)
310 3pk0_A Short-chain dehydrogena 21.0 1.6E+02 0.0053 20.9 4.9 38 67-109 20-57 (262)
311 3ijr_A Oxidoreductase, short c 21.0 1.8E+02 0.006 21.1 5.2 26 66-92 56-81 (291)
312 2rhc_B Actinorhodin polyketide 21.0 1.9E+02 0.0064 20.6 5.3 39 67-110 32-70 (277)
313 3e8x_A Putative NAD-dependent 20.9 1.1E+02 0.0039 20.9 4.0 26 66-92 30-55 (236)
314 4f11_A Gamma-aminobutyric acid 20.9 91 0.0031 23.5 3.7 47 67-113 139-185 (433)
315 3thd_A Beta-galactosidase; TIM 20.9 1E+02 0.0035 26.5 4.3 44 71-114 43-96 (654)
316 1xu9_A Corticosteroid 11-beta- 20.8 1.7E+02 0.0059 20.8 5.1 25 66-91 37-61 (286)
317 2ews_A Pantothenate kinase; PA 20.7 2.2E+02 0.0075 21.5 5.8 45 67-113 222-268 (287)
318 2pfu_A Biopolymer transport EX 20.5 1.5E+02 0.0052 17.8 4.5 21 92-112 66-86 (99)
319 3ox4_A Alcohol dehydrogenase 2 20.5 1.5E+02 0.005 23.0 4.9 46 69-114 47-92 (383)
320 2whl_A Beta-mannanase, baman5; 20.4 1.2E+02 0.0042 21.9 4.2 41 74-114 37-81 (294)
321 1xg5_A ARPG836; short chain de 20.4 1.9E+02 0.0065 20.4 5.2 40 66-110 41-80 (279)
322 2uvd_A 3-oxoacyl-(acyl-carrier 20.3 2.2E+02 0.0074 19.7 5.5 22 67-88 14-35 (246)
323 4ibo_A Gluconate dehydrogenase 20.2 1.5E+02 0.005 21.3 4.6 40 66-110 35-74 (271)
324 1rvg_A Fructose-1,6-bisphospha 20.2 1.8E+02 0.006 22.5 5.2 40 72-112 86-128 (305)
325 3rrx_A EXO-1,3/1,4-beta-glucan 20.1 59 0.002 28.6 2.7 51 59-109 132-199 (822)
326 2hqb_A Transcriptional activat 20.1 2.2E+02 0.0076 20.5 5.6 46 61-111 108-153 (296)
327 1ydh_A AT5G11950; structural g 20.0 2.4E+02 0.0084 20.3 5.8 39 64-111 28-66 (216)
328 1g0o_A Trihydroxynaphthalene r 20.0 2.2E+02 0.0076 20.2 5.6 23 66-88 38-60 (283)
No 1
>3r8s_O 50S ribosomal protein L18; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 3fik_O 3j19_O 2wwq_O 3oat_O* 3oas_O* 3ofd_O 3ofc_O 3ofr_O* 3ofz_O* 3og0_O 3ofq_O 3r8t_O 3i1n_O 1p85_M 1p86_M 1vs8_O 1vs6_O 2aw4_O 2awb_O 1vt2_O ...
Probab=100.00 E-value=2e-42 Score=242.30 Aligned_cols=97 Identities=35% Similarity=0.466 Sum_probs=95.0
Q ss_pred CCCcEEEEEEeCCceEEEEEeCCCCeEEEEEechhHhhhcccCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEecCCCcch
Q 033657 16 LKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRY 95 (114)
Q Consensus 16 ~~~~RL~V~~Snkhi~Aqvid~~~~~~lasaST~e~~~k~~l~~~~n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~~~y 95 (114)
..+|||+||+||+|||||||||++|+||+||||.||++++++.+++|++||+.||++||+||+++||++|+|| ||+|+|
T Consensus 20 ~~rpRL~V~rSnkhIyAQiidd~~g~tlasAST~e~~~~~~~~~~~n~~AA~~vG~llA~Ral~~GI~~vvfD-rgg~~y 98 (116)
T 3r8s_O 20 LGATRLVVHRTPRHIYAQVIAPNGSEVLVAASTVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSFD-RSGFQY 98 (116)
T ss_dssp TTCCEEEEEECSSCEEEEEECTTSSCEEEECCSSSHHHHTTCSCSSSHHHHHHHHHHHHHHHHTTTCCCCEEE-CTTSCS
T ss_pred CCCCEEEEEEeCCEEEEEEEEcCCCeEEEEEeeCchhhccccCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEe-cCCCcc
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999999 799999
Q ss_pred hhHHHHHHHHHHHcCccc
Q 033657 96 HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 96 hGrV~a~~~~lre~Gl~~ 113 (114)
||||+||+|++||+||+|
T Consensus 99 hGrV~Ala~~are~Gl~f 116 (116)
T 3r8s_O 99 HGRVQALADAAREAGLQF 116 (116)
T ss_dssp SSHHHHHHHHHHHTTCCC
T ss_pred cHHHHHHHHHHHHhCCCC
Confidence 999999999999999998
No 2
>3bbo_Q Ribosomal protein L18; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=100.00 E-value=7.5e-42 Score=250.54 Aligned_cols=102 Identities=26% Similarity=0.394 Sum_probs=96.7
Q ss_pred CccCCCCCcEEEEEEeCCceEEEEEeCCCCeEEEEEechhHhhhcccC--CCCCHHHHHHHHHHHHHHHhhCCCCEEEEe
Q 033657 11 KLSNFLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIG--CTRDVAAASKIGKILGERLLLKDIPAVTVF 88 (114)
Q Consensus 11 ~~~~~~~~~RL~V~~Snkhi~Aqvid~~~~~~lasaST~e~~~k~~l~--~~~n~~Aa~~vG~~la~R~~e~gI~~v~~d 88 (114)
++.++.++|||+||+||+|||||||||.+|+||+||||+||++++.++ +++|++||+.||++||+||+|+||++|+||
T Consensus 58 ki~gt~~rPRL~V~rSnkhIyAQvIdd~~g~tLasASTlek~lk~~l~~g~~~n~~AA~~VG~liAeRA~e~GI~~VvFD 137 (161)
T 3bbo_Q 58 KVEGTPERPRLCVFRSNKHLYVQVIDDSKMHTLASASTMQKSISEELDYSSSPTIEVAKKVGEVIASACLEKGITKVAFD 137 (161)
T ss_dssp GGGGSSSCCCCEEEECSSCEEEEEECCTTSCEEEEEEHHHHHHHHCCTTCCSSSHHHHHHHHHHSSSHHHHTSSCCCCCC
T ss_pred hhccCCCCCEEEEEecCCeEEEEEEECCCCEEEEEEeCCcHHHHhhccccCCCCHHHHHHHHHHHHHHHHHCCCCEEEEe
Confidence 446677899999999999999999999999999999999999998776 689999999999999999999999999998
Q ss_pred cCCCcchhhHHHHHHHHHHHcCccc
Q 033657 89 LKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 89 ~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
||+|+|||||+||+|++||+||+|
T Consensus 138 -Rgg~~YhGRVkAladaaRe~GL~F 161 (161)
T 3bbo_Q 138 -RGGYPYHGRVKALADAAREKGLQF 161 (161)
T ss_dssp -CSSSCSSSTTHHHHHHHTTTTCCC
T ss_pred -CCCCcchHHHHHHHHHHHHhCCcC
Confidence 799999999999999999999997
No 3
>3v2d_S 50S ribosomal protein L18; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_M 2hgj_R 2hgq_R 2hgu_R 1vsa_M 2j03_S 2jl6_S 2jl8_S 2v47_S 2v49_S 2wdi_S 2wdj_S 2wdl_S 2wdn_S 2wh2_S 2wh4_S 2wrj_S 2wrl_S 2wro_S 2wrr_S ...
Probab=100.00 E-value=1.2e-40 Score=232.07 Aligned_cols=95 Identities=26% Similarity=0.367 Sum_probs=90.0
Q ss_pred ccCCCCCcEEEEEEeCCceEEEEEeCCCCeEEEEEechhHhhhcccCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEecCC
Q 033657 12 LSNFLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKR 91 (114)
Q Consensus 12 ~~~~~~~~RL~V~~Snkhi~Aqvid~~~~~~lasaST~e~~~k~~l~~~~n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~ 91 (114)
+.++. +|||+||+||+||||||+||++|+||+||||.||+++ ++|++||+.||++||+||+++||++|+|| ||
T Consensus 18 i~gt~-rpRL~V~rSnkhiyAQiidd~~~~tlasAsT~e~~~k-----~~n~~AA~~vG~llA~ra~~~GI~~vvfD-rg 90 (112)
T 3v2d_S 18 IKRTG-RLRLSVFRSLKHIYAQIIDDEKGVTLVSASSLALKLK-----GNKTEVARQVGRALAEKALALGIKQVAFD-RG 90 (112)
T ss_dssp HHHTC-CCEEEEEECSSCEEEEEEETTTTEEEEEEETTTTTCC-----CCHHHHHHHHHHHHHHHHHTTTCCBCEEE-CT
T ss_pred hcCCC-CCEEEEEEeCCeEEEEEEecCCCeEEEEEEecchhcc-----CCCHHHHHHHHHHHHHHHHHCCCCEEEEe-cC
Confidence 34566 8999999999999999999999999999999999974 68999999999999999999999999999 79
Q ss_pred CcchhhHHHHHHHHHHHcCccc
Q 033657 92 EQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 92 ~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
+|+|||||+||+|++||+||+|
T Consensus 91 g~~yhGrV~Ala~~are~GL~f 112 (112)
T 3v2d_S 91 PYKYHGRVKALAEGAREGGLEF 112 (112)
T ss_dssp TSCSCSSTTHHHHHHHHTTCBC
T ss_pred CCcccHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999998
No 4
>1ovy_A 50S ribosomal protein L18; ribosome; NMR {Geobacillus stearothermophilus} SCOP: c.55.4.1
Probab=100.00 E-value=8.3e-41 Score=235.31 Aligned_cols=100 Identities=31% Similarity=0.450 Sum_probs=93.6
Q ss_pred CccCCCCCcEEEEEEeCCceEEEEEeCCCCeEEEEEechhHhhhcccCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEecC
Q 033657 11 KLSNFLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLK 90 (114)
Q Consensus 11 ~~~~~~~~~RL~V~~Snkhi~Aqvid~~~~~~lasaST~e~~~k~~l~~~~n~~Aa~~vG~~la~R~~e~gI~~v~~d~r 90 (114)
++.++..+|||+||+||+||||||+||++|+||+||||.||+++ +++++|++||+.||++||+||+++||++|+|| |
T Consensus 21 ki~gt~~rpRL~V~rSnkhIyAQiidd~~~~tl~sAsT~e~~~~--~~~~~n~~AA~~vG~llA~Ral~~GI~~vvfD-r 97 (120)
T 1ovy_A 21 KIFGTTERPRLSVFRSNKHIYAQIIDDTKSATIVSASTLDKEFG--LDSTNNIEAAKKVGELVAKRALEKGIKQVVFD-R 97 (120)
T ss_dssp ---CCSSCCSEEEEEETTEEEEEEECCSSCCCEEEESTTSTTTC--SSCTTSHHHHHHHHHHHHHHHHHHSSSCCCCC-S
T ss_pred HhcCCCCCCEEEEEEeCCeEEEEEEEcCCCEEEEEEecCchhhC--cCCCCcHHHHHHHHHHHHHHHHHCCCCEEEEe-c
Confidence 45677889999999999999999999999999999999999987 67889999999999999999999999999998 7
Q ss_pred CCcchhhHHHHHHHHHHHcCccc
Q 033657 91 REQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 91 ~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
|+|+|||||+||+|++||+||+|
T Consensus 98 gg~~yhgrV~ala~~are~GL~f 120 (120)
T 1ovy_A 98 GGYLYHGRVKALADAAREAGLEF 120 (120)
T ss_dssp TTCSSCSSTHHHHHHHHHHHCCC
T ss_pred CCccccHHHHHHHHHHHHhCCcC
Confidence 99999999999999999999997
No 5
>2zjr_L 50S ribosomal protein L18; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: c.55.4.1 PDB: 1sm1_M* 2zjp_L* 2zjq_L 1nkw_M 3cf5_L* 3dll_L* 3pio_L* 3pip_L* 1nwy_M* 1nwx_M* 1xbp_M* 1pnu_M 1pny_M 1vor_P 1vou_P 1vow_P 1voy_P 1vp0_P
Probab=100.00 E-value=4.8e-39 Score=224.59 Aligned_cols=96 Identities=27% Similarity=0.366 Sum_probs=87.7
Q ss_pred CccCC---CCCcEEEEEEeCCceEEEEEeCCCCeEEEEEechhHhhhcccCCCCCHHHHHHHHHHHHHHHhhCCCCEEEE
Q 033657 11 KLSNF---LKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTV 87 (114)
Q Consensus 11 ~~~~~---~~~~RL~V~~Snkhi~Aqvid~~~~~~lasaST~e~~~k~~l~~~~n~~Aa~~vG~~la~R~~e~gI~~v~~ 87 (114)
|+.++ ..+|||+||+||+|||||||||++|+||+||||.| + ++++|++||+.||++||+||+++||++|+|
T Consensus 16 ki~gt~~~~~rpRL~V~rSnkhIyAQiidd~~~~tl~sAST~e--l----~~~~n~~AA~~vG~llA~Ral~~GI~~vvf 89 (114)
T 2zjr_L 16 KVRTTTAASGRLRLSVYRSSKHIYAQIIDDSRGQTLAAASSAA--L----KSGNKTDTAAAVGKALAAAAAEKGIKQVVF 89 (114)
T ss_dssp HHHSCSTTTCSEEECCCTTSSCCCCCEEETTTTEECCCCCSCS--C----CTTCSSSSHHHHHHHHHHHHHTTCCCCCEE
T ss_pred hhccccCCCCCCEEEEEEeCCeEEEEEEEcCCCEEEEEEEchH--h----cCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
Confidence 34567 88999999999999999999999999999999999 3 467899999999999999999999999999
Q ss_pred ecCCCcchhhHHHHHHHHHHHcCccc
Q 033657 88 FLKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 88 d~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
| ||+|+|||||+||+|++||+||+|
T Consensus 90 D-rgg~~yhgrV~Ala~~are~GL~f 114 (114)
T 2zjr_L 90 D-RGSYKYHGRVKALADAAREGGLDF 114 (114)
T ss_dssp C-CCSSCSCSHHHHHHHHHHHHC---
T ss_pred e-cCCccccHHHHHHHHHHHHhCCcC
Confidence 8 799999999999999999999987
No 6
>1vq8_N 50S ribosomal protein L18P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: c.55.4.1 PDB: 1vq4_N* 1vq5_N* 1vq6_N* 1vq7_N* 1s72_N* 1vq9_N* 1vqk_N* 1vql_N* 1vqm_N* 1vqn_N* 1vqo_N* 1vqp_N* 1yhq_N* 1yi2_N* 1yij_N* 1yit_N* 1yj9_N* 1yjn_N* 1yjw_N* 2otj_N* ...
Probab=100.00 E-value=5e-35 Score=218.89 Aligned_cols=96 Identities=21% Similarity=0.134 Sum_probs=90.7
Q ss_pred CCCcEEEEEEeCCceEEEEE--eCCCCeEEEEEechhHhhhccc-CCCCCHHHHHHHHHHHHHHHhhCCCCEEEEecCCC
Q 033657 16 LKPYVLRMHFTNKYVSAQVI--HSPTATVASSATSQEKALRSSI-GCTRDVAAASKIGKILGERLLLKDIPAVTVFLKRE 92 (114)
Q Consensus 16 ~~~~RL~V~~Snkhi~Aqvi--d~~~~~~lasaST~e~~~k~~l-~~~~n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~ 92 (114)
..+|||+|++||+||||||| ||++|+||+||||.||+ +..+ .+++|++||+.||++||+||+++||++|+|| ||+
T Consensus 30 ~~rpRL~V~rSnkhIyAQII~~dd~~~~tlasAsT~e~~-k~~~k~~~~N~~AA~~vG~llA~Ral~kGI~~vvfD-rgg 107 (187)
T 1vq8_N 30 SGKPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLA-EYGWEAPTGNMPSAYLTGLLAGLRAQEAGVEEAVLD-IGL 107 (187)
T ss_dssp TCSCEEEEEECSSCEEEEEEECCTTSCEEEEEEESGGGG-GGTCCSCSSSHHHHHHHHHHHHHHHHHTTCCBCEEE-CTT
T ss_pred cCCCEEEEEEeCCcEEEEEEEecCCCCEEEEEEEccchh-ccccccCCCcHHHHHHHHHHHHHHHHHCCCCEEEEc-CCC
Confidence 56799999999999999999 99999999999999999 5444 6789999999999999999999999999998 799
Q ss_pred cchh--hHHHHHHHHHHHcCccc
Q 033657 93 QRYH--GKVKAVIDSLREAGVKL 113 (114)
Q Consensus 93 ~~yh--GrV~a~~~~lre~Gl~~ 113 (114)
++|| |||+||+|++||+||+|
T Consensus 108 ~~yh~GgRV~Ala~gAre~GL~f 130 (187)
T 1vq8_N 108 NSPTPGSKVFAIQEGAIDAGLDI 130 (187)
T ss_dssp SCCCTTCHHHHHHHHHHHTTCBC
T ss_pred ceeccchHHHHHHHHhhcCCEec
Confidence 9999 99999999999999997
No 7
>3j21_O 50S ribosomal protein L18P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=100.00 E-value=5.9e-34 Score=215.27 Aligned_cols=97 Identities=18% Similarity=0.079 Sum_probs=90.8
Q ss_pred CCCcEEEEEEeCCceEEEEEe--CCCCeEEEEEechhHhh-hcccCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEecCCC
Q 033657 16 LKPYVLRMHFTNKYVSAQVIH--SPTATVASSATSQEKAL-RSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKRE 92 (114)
Q Consensus 16 ~~~~RL~V~~Snkhi~Aqvid--~~~~~~lasaST~e~~~-k~~l~~~~n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~ 92 (114)
..+|||+|++||+||||||+| +++|+||+||||.||++ .+++.+++|++||+.||++||+||+++||++|+|| ||+
T Consensus 30 ~~kpRL~V~rSnkhIyAQIId~d~~g~~tLasAST~El~lk~g~~~~~~N~~AA~~vG~llA~Ral~kGI~~vvfD-rgg 108 (203)
T 3j21_O 30 SGKPRLVVRKSLNHHIAQIIVYDPKGDRTLVSAHTRELIRDFGWKGHCGNTPSAYLLGLLIGYKAKQAGIEEAILD-IGL 108 (203)
T ss_dssp TCCCEEEEEECSSCEEEEEEECCTTSCEEEEEECSTTTSSSSSCCSCTTSHHHHHHHHHHSSSSTTSSCCCCCEEE-CCS
T ss_pred cCCCEEEEEEeCCeEEEEEEEecCCCCeEEEEEEccchhhhhcccCCCCcHHHHHHHHHHHHHHHHhCCCCEEEEe-cCc
Confidence 457999999999999999998 78899999999999996 46667889999999999999999999999999998 799
Q ss_pred cch--hhHHHHHHHHHHHcCccc
Q 033657 93 QRY--HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 93 ~~y--hGrV~a~~~~lre~Gl~~ 113 (114)
++| ||||+||+|++||+||+|
T Consensus 109 ~~y~~hgRV~Ala~gAre~GL~i 131 (203)
T 3j21_O 109 HPPVRGSSVFAVLKGAVDAGLNV 131 (203)
T ss_dssp SCCCTTSHHHHHHHHHHHHTCCC
T ss_pred ceeccCcchhhhhhhcccCCeec
Confidence 999 899999999999999987
No 8
>2zkr_n 60S ribosomal protein L5; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=99.96 E-value=8.7e-29 Score=194.94 Aligned_cols=96 Identities=18% Similarity=0.156 Sum_probs=89.1
Q ss_pred CCcEEEEEEeCCceEEEEEeCC--CCeEEEEEechhHhhhcccCCCCCHHHHHHHHHHHHHHHhhC--------------
Q 033657 17 KPYVLRMHFTNKYVSAQVIHSP--TATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLK-------------- 80 (114)
Q Consensus 17 ~~~RL~V~~Snkhi~Aqvid~~--~~~~lasaST~e~~~k~~l~~~~n~~Aa~~vG~~la~R~~e~-------------- 80 (114)
.+|||+|++||+||||||||+. +|+|||||||.|++-.++..+++|.+||+.+|.+||+||+++
T Consensus 47 ~kpRLvVrrSNk~I~aQII~~~~~gd~tLasAsS~El~kyg~k~g~tN~aAAy~tGlLlArRal~k~~ld~~y~G~~e~~ 126 (297)
T 2zkr_n 47 PKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVT 126 (297)
T ss_dssp CSEEEEEEEETTEEEEEEEECCSSSCEEEEEEEGGGGGGTCCCSCSSSHHHHHHHHHHHHHHHHCCCSCCCCCSSCCSSS
T ss_pred CCceEEEEEecCcEEEEEEeccCCCCEEEEEeecCcccccccccCCCcHHHHHHHHHHHHHHHHHhhccchhhcCccccc
Confidence 4699999999999999999977 999999999999994445557899999999999999999999
Q ss_pred -------------CCCEEEEecCCCcch--hhHHHHHHHHHHHcCccc
Q 033657 81 -------------DIPAVTVFLKREQRY--HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 81 -------------gI~~v~~d~r~~~~y--hGrV~a~~~~lre~Gl~~ 113 (114)
||.+++|| +|+++| ||||+|++++++|+||+|
T Consensus 127 g~~~~ve~~~~~~gi~~vvfD-rGl~ryttggRVfa~akGArDgGL~~ 173 (297)
T 2zkr_n 127 GDEYNVESIDGQPGAFTCYLD-AGLARTTTGNKVFGALKGAVDGGLSI 173 (297)
T ss_dssp SCCCCCSSSCSSSCCCBEEEE-CTTSCCCTTCHHHHHHHHHHHTTCBC
T ss_pred cccccccccccCCCceEEEEe-cCCcccCCCchHHHHHHHHHhcCccc
Confidence 99999999 799999 999999999999999987
No 9
>3u5e_D 60S ribosomal protein L5; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3u5i_D 4b6a_D 3izc_Q 3izs_Q 3o58_E 3o5h_E 3jyw_E 1s1i_E
Probab=99.94 E-value=2.4e-26 Score=181.23 Aligned_cols=96 Identities=26% Similarity=0.261 Sum_probs=88.9
Q ss_pred CCcEEEEEEeCCceEEEEEeC--CCCeEEEEEechhHhhhcccCCCCCHHHHHHHHHHHHHHHhhC--------CCCE--
Q 033657 17 KPYVLRMHFTNKYVSAQVIHS--PTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLK--------DIPA-- 84 (114)
Q Consensus 17 ~~~RL~V~~Snkhi~Aqvid~--~~~~~lasaST~e~~~k~~l~~~~n~~Aa~~vG~~la~R~~e~--------gI~~-- 84 (114)
.+|||+|++||+||||||||+ ++|+|||||||.|++.+++..+++|.+||+.||.+||+||+++ |+++
T Consensus 47 ~kpRLvV~rSNrhIyAQIIdd~~~Gd~tLaSASS~El~k~g~k~~~~N~~AAy~vG~LiAeRAl~k~~ld~~y~G~~e~~ 126 (297)
T 3u5e_D 47 PKYRLVVRFTNKDIICQIISSTITGDVVLAAAYSHELPRYGITHGLTNWAAAYATGLLIARRTLQKLGLDETYKGVEEVE 126 (297)
T ss_dssp CCCEEEEEEETTEEEEEEEECCTTCCEEEEEEEGGGGGGGTCCSCTTSHHHHHHHHHHHHHHHHHHTSTTSSCCCCSSCC
T ss_pred CCceEEEEEcCCeEEEEEeecCCCCCEEEEEEeecchhhcccCCCCCcHHHHHHHHHHHHHHHHHhhCCcccccCccccc
Confidence 689999999999999999998 6889999999999997776667889999999999999999999 9887
Q ss_pred -----------------EEEecCCCcch--hhHHHHHHHHHHHcCccc
Q 033657 85 -----------------VTVFLKREQRY--HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 85 -----------------v~~d~r~~~~y--hGrV~a~~~~lre~Gl~~ 113 (114)
++|| .|..++ |+||++++++++++||++
T Consensus 127 g~~~~ve~~~~~~~~f~~~LD-vGl~rtttG~RVfaalKGA~DgGL~I 173 (297)
T 3u5e_D 127 GEYELTEAVEDGPRPFKVFLD-IGLQRTTTGARVFGALKGASDGGLYV 173 (297)
T ss_dssp CCCCCCCCCSSSCCCCBCEEE-CTTCCCCTTCSHHHHHHHHHHHTCBC
T ss_pred cceeccccccCCCCceeEEEe-cCCCccCccceehhhhhcccccCccc
Confidence 7898 698888 999999999999999975
No 10
>4a17_M RPL5, 60S ribosomal protein L5; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_M 4a1c_M 4a1e_M
Probab=99.94 E-value=2.8e-26 Score=181.00 Aligned_cols=97 Identities=23% Similarity=0.188 Sum_probs=89.1
Q ss_pred CCCcEEEEEEeCCceEEEEEeC--CCCeEEEEEechhHhhhcccCCCCCHHHHHHHHHHHHHHHhhC--------CCC--
Q 033657 16 LKPYVLRMHFTNKYVSAQVIHS--PTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLK--------DIP-- 83 (114)
Q Consensus 16 ~~~~RL~V~~Snkhi~Aqvid~--~~~~~lasaST~e~~~k~~l~~~~n~~Aa~~vG~~la~R~~e~--------gI~-- 83 (114)
..+|||+|++||+||||||||| ++|+|||||||.|++.+++..+++|.+||+.||.+||+||+++ |++
T Consensus 46 spkpRLvV~rSNrhIyAQIIdd~~~Gd~tLaSASS~El~~~g~k~~~~N~~AAy~vG~LiAeRAl~k~~~d~~y~G~~e~ 125 (301)
T 4a17_M 46 TPKYRLVARATNTRIIAQIVYATLKCDRVLCAADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQIGLDTVYAGQTKV 125 (301)
T ss_dssp CCCEEEEEEECSSCEEEEEEEECSSCEEEEEEEETTHHHHTTCCSCTTSHHHHHHHHHHHHHHHHHHHTCTTTCCCCSSC
T ss_pred CCCceEEEEEcCCeEEEEEeecCCCCCEEEEEEeeccchhccccCCCCcHHHHHHHHHHHHHHHHHhcCCcccccCcccc
Confidence 3579999999999999999998 5789999999999998777678899999999999999999999 998
Q ss_pred -----------------EEEEecCCCcch--hhHHHHHHHHHHHcCccc
Q 033657 84 -----------------AVTVFLKREQRY--HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 84 -----------------~v~~d~r~~~~y--hGrV~a~~~~lre~Gl~~ 113 (114)
.++|| .|..++ |+||++++++++++||++
T Consensus 126 ~g~~~~ve~~~~~~~~f~~~LD-~Gl~rtt~G~RVfaalKGA~DgGL~I 173 (301)
T 4a17_M 126 DGAYFNVDEDQKEKKPFKAILD-AGLVRTTTGNRVFGVLKGACDGGINI 173 (301)
T ss_dssp CCSCCCGGGTCCSSCCCBCEEE-CTTSCCCSSCHHHHHHHHHHHTTCBC
T ss_pred ccceeecccccCCCCceEEEEe-cCCcccCcccchhhhhhcccccCccc
Confidence 57888 698888 999999999999999975
No 11
>3iz5_Q 60S ribosomal protein L5 (L18P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_Q
Probab=99.88 E-value=4.6e-23 Score=162.72 Aligned_cols=92 Identities=22% Similarity=0.177 Sum_probs=84.6
Q ss_pred CcEEEEEEeCCceEEEEEeC--CCCeEEEEEechhHhhhcccCCCCCHHHHHHHHHHHHHHHhhC--------CCCE---
Q 033657 18 PYVLRMHFTNKYVSAQVIHS--PTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLK--------DIPA--- 84 (114)
Q Consensus 18 ~~RL~V~~Snkhi~Aqvid~--~~~~~lasaST~e~~~k~~l~~~~n~~Aa~~vG~~la~R~~e~--------gI~~--- 84 (114)
+|||+ ||+|||||||++ .+++|||||||.|++.+++..+++|.+||+.||.+||+||+++ |+++
T Consensus 52 KpRLV---SNrhIyaQII~~~i~GD~tLaSAsS~EL~kyG~k~g~~N~aAAy~tGlLiA~RAl~k~~ld~~y~G~~e~~g 128 (304)
T 3iz5_Q 52 KYRFV---TNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQEYEGNVEATG 128 (304)
T ss_dssp CSSSS---CSSCCEEEEEEEETTEEEEEEEEETTTGGGGSCCSCTTSHHHHHHHHHHHHHHHHTTCSSCCCCCSSSCCCS
T ss_pred Cceee---cCCcEEEEEEecCCCCCEEEEEEecCchhhcccCCCCCcHHHHHHHHHHHHHHHHHhhCCccccCCcccccc
Confidence 47888 999999999997 4779999999999998887668899999999999999999999 9998
Q ss_pred ---------------EEEecCCCcchh--hHHHHHHHHHHHcCccc
Q 033657 85 ---------------VTVFLKREQRYH--GKVKAVIDSLREAGVKL 113 (114)
Q Consensus 85 ---------------v~~d~r~~~~yh--GrV~a~~~~lre~Gl~~ 113 (114)
++|| .|..+++ +||++++++++++||.+
T Consensus 129 ~~~~ve~~~~~~~f~~~LD-iGL~rtttG~RVfaalKGA~DgGL~I 173 (304)
T 3iz5_Q 129 EDYYVEPADERRPFRALLD-VGLIRTTTGNRVFGALKGALDGGLDI 173 (304)
T ss_dssp CCCSSCCSSCSCCCSCEEE-CTTCCCCSSCHHHHHHHHHHTTTCCC
T ss_pred ceecccccCCCCCceEEEe-cCCcccccCceeEEeeccccccCccc
Confidence 8899 6999887 99999999999999975
No 12
>2xzm_K RPS14E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_K 3j0o_K 3j0l_K 2zkq_k 3iz6_K 3jyv_K*
Probab=98.06 E-value=4.2e-05 Score=55.17 Aligned_cols=98 Identities=14% Similarity=0.049 Sum_probs=72.2
Q ss_pred cCCCCCcEEEEEEeCCceEEEEEeCCCCeEEEEEechhHhhhcccCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEecCCC
Q 033657 13 SNFLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKRE 92 (114)
Q Consensus 13 ~~~~~~~RL~V~~Snkhi~Aqvid~~~~~~lasaST~e~~~k~~l~~~~n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~ 92 (114)
++......+.|+-|-++...+|.|..+..++.++ |--...++. ...++--||...++.+|++|+|.||+.+.+..+|.
T Consensus 23 ~~~~~~gi~hI~asfNNTiVtiTD~~G~~~~~~s-sgg~~~k~~-r~ksTpyAAq~aa~~~a~~a~e~Gi~~v~V~vkG~ 100 (151)
T 2xzm_K 23 ANENVFGVCHIMATWNDTFIHVTDLSGRETLVRV-TGGMKVKAD-REESSPYAAMQAAIDVVNRCKELKINALHIKLRAK 100 (151)
T ss_dssp TTCCCEEEEEEEBCSSCBCCEEECTTCCSEEEEC-CHHHHCSSG-GGGSCHHHHHHHHHHHHHHHHHHTCCEEEEEEECC
T ss_pred CCCeeeeEEEEEccCCCEEEEEECCCCCEEEEEe-cCcceEeCC-CCcCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEcC
Confidence 5566678899999999999999997766677554 433333332 11456788999999999999999999988877642
Q ss_pred --cc---h-hhHHHHHHHHHHHcCccc
Q 033657 93 --QR---Y-HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 93 --~~---y-hGrV~a~~~~lre~Gl~~ 113 (114)
.+ . -| -++++.+|..+||++
T Consensus 101 gg~~~kgpG~G-resairaL~~~GlkI 126 (151)
T 2xzm_K 101 GGVETKQPGPG-AQSALRALARSGMKI 126 (151)
T ss_dssp CTTSCCSCCSH-HHHHHHHHHHTSCEE
T ss_pred CCCCccCCCcc-HHHHHHHHHHCCCEE
Confidence 11 1 23 478888888899875
No 13
>2vqe_K 30S ribosomal protein S11, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.55.4.1 PDB: 1gix_N* 1hnw_K* 1hnx_K* 1hnz_K* 1hr0_K 1ibk_K* 1ibl_K* 1ibm_K 1j5e_K 1jgo_N* 1jgp_N* 1jgq_N* 1ml5_N* 1n32_K* 1n33_K* 1n34_K 1n36_K 1xmo_K* 1xmq_K* 1xnq_K* ...
Probab=98.05 E-value=4.8e-05 Score=53.50 Aligned_cols=90 Identities=12% Similarity=0.163 Sum_probs=73.2
Q ss_pred CcEEEEEEeCCceEEEEEeCCCCeEEEEEechhHhhhcccCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEecCCCcchhh
Q 033657 18 PYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHG 97 (114)
Q Consensus 18 ~~RL~V~~Snkhi~Aqvid~~~~~~lasaST~e~~~k~~l~~~~n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~~~yhG 97 (114)
...+.|+-|.++...+|.| .+|.+++.+|+-...+++.. .+.--||...++.++++|+|.||+.+.+..+|.- -|
T Consensus 16 ~gi~hI~as~NNTivtiTd-~~G~~~~~~SaG~~gfKg~r--k~tp~AA~~aa~~~~~~~~~~Gi~~v~V~vkG~G--~G 90 (129)
T 2vqe_K 16 SGRAYIHASYNNTIVTITD-PDGNPITWSSGGVIGYKGSR--KGTPYAAQLAALDAAKKAMAYGMQSVDVIVRGTG--AG 90 (129)
T ss_dssp EEEEEEEECSSCEEEEEEC-TTSCEEEECCTTTTTCCSGG--GGSHHHHHHHHHHHHHHHHTTTCCEEEEEEESCC--TT
T ss_pred ceEEEEEecCCCEEEEEEc-CCCCEEEEEeccceeEcCCC--cCCHHHHHHHHHHHHHHHHHhCCeEEEEEEECCC--CC
Confidence 4779999999999999998 55778878888777777653 4678899999999999999999999888776531 24
Q ss_pred HHHHHHHHHHHcCccc
Q 033657 98 KVKAVIDSLREAGVKL 113 (114)
Q Consensus 98 rV~a~~~~lre~Gl~~ 113 (114)
| ++++.+|...||++
T Consensus 91 r-e~airaL~~~Gl~I 105 (129)
T 2vqe_K 91 R-EQAIRALQASGLQV 105 (129)
T ss_dssp H-HHHHHHHHTSSSEE
T ss_pred H-HHHHHHHHHCCCEE
Confidence 4 57788998899875
No 14
>3r8n_K 30S ribosomal protein S11; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_K 3fih_K* 3iy8_K 3j18_K* 2wwl_K 3oar_K 3oaq_K 3ofb_K 3ofa_K 3ofp_K 3ofx_K 3ofy_K 3ofo_K 3r8o_K 4a2i_K 4gd1_K 4gd2_K 3i1m_K 1vs7_K* 3e1a_C ...
Probab=97.91 E-value=6.7e-05 Score=51.93 Aligned_cols=88 Identities=18% Similarity=0.196 Sum_probs=68.6
Q ss_pred EEEEEEeCCceEEEEEeCCCCeEEEEEechhHhhhcccCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHH
Q 033657 20 VLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKV 99 (114)
Q Consensus 20 RL~V~~Snkhi~Aqvid~~~~~~lasaST~e~~~k~~l~~~~n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV 99 (114)
.+.|+-|-++...+|.| .+|.+++.+|+-...+|+.. .++--||...++.++++|+|.||+.+.+-.+|.- -| -
T Consensus 8 i~hI~as~NNTivtiTD-~~G~~i~~~S~G~~gfKg~r--k~tp~AA~~aa~~~~~~~~~~Gi~~v~v~vkG~G--~G-r 81 (117)
T 3r8n_K 8 VAHIHASFNNTIVTITD-RQGNALGWATAGGSGFRGSR--KSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPG--PG-R 81 (117)
T ss_dssp EEEEEECSSCEEEEEEC-TTSCCSEEEETGGGSCCGGG--GSSHHHHHHHHHHHHHHHTTSCCCEEEEEEECSS--SS-T
T ss_pred EEEEEcccCCEEEEEEc-CCCCEEEEEcCCccccCCCc--cCCHHHHHHHHHHHHHHHHHhCCcEEEEEEeCCC--cc-H
Confidence 46789999999999988 45668888888777777654 4577899999999999999999999887765531 12 3
Q ss_pred HHHHHHHHHcCccc
Q 033657 100 KAVIDSLREAGVKL 113 (114)
Q Consensus 100 ~a~~~~lre~Gl~~ 113 (114)
++++.+|...||++
T Consensus 82 ~~airaL~~~Gl~I 95 (117)
T 3r8n_K 82 ESTIRALNAAGFRI 95 (117)
T ss_dssp THHHHHHHHTTCEE
T ss_pred HHHHHHHHhCCCEE
Confidence 45667777889875
No 15
>3j20_M 30S ribosomal protein S11P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=97.82 E-value=0.00027 Score=50.21 Aligned_cols=93 Identities=17% Similarity=0.097 Sum_probs=70.5
Q ss_pred CcEEEEEEeCCceEEEEEeCCCCeEEEEEechhHhhhcccCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEecCCC--cc-
Q 033657 18 PYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKRE--QR- 94 (114)
Q Consensus 18 ~~RL~V~~Snkhi~Aqvid~~~~~~lasaST~e~~~k~~l~~~~n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~--~~- 94 (114)
...+.|+-|-++...+|.|..+..+|+.+|.-...+++. ..+.--||...++.++++|+|.||+.+.+..+|. .+
T Consensus 14 ~gi~hI~asfNNTivtiTD~~G~~~i~~~S~G~~gfkg~--~ksTp~AA~~aa~~~~~~a~e~Gi~~v~V~vkG~gg~~~ 91 (137)
T 3j20_M 14 WGIAHIYSSFNNTIIHITDITGAETISRWSGGMVVKADR--DEPSPYAAMLAARRAAEEALEKGIVGVHIRVRAPGGSKS 91 (137)
T ss_dssp EEEEEEEECSSCEEEEEEESSSCSEEEEEEGGGTCSCTT--TSSSHHHHHHHHHHHHHHHHHHTEEEEEEEEECCCSSSC
T ss_pred ceEEEEEcCCCCEEEEEEcCCCCEEEEEEccceeeecCC--ccCCHHHHHHHHHHHHHHHHHcCCeEEEEEEECCCCCCC
Confidence 346789999999999999966557998887776655542 2356779999999999999999999988877661 11
Q ss_pred --h-hhHHHHHHHHHHHcCccc
Q 033657 95 --Y-HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 95 --y-hGrV~a~~~~lre~Gl~~ 113 (114)
. -| -++++.+|...||++
T Consensus 92 ~~pG~G-resairaL~~~Gl~I 112 (137)
T 3j20_M 92 KTPGPG-AQAAIRALARAGLKI 112 (137)
T ss_dssp CSCCTH-HHHHHHHHHHHTCEE
T ss_pred cCCCCc-HHHHHHHHHhCCCEE
Confidence 1 34 455677888889875
No 16
>3bbn_K Ribosomal protein S11; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=97.78 E-value=5e-05 Score=54.16 Aligned_cols=90 Identities=17% Similarity=0.180 Sum_probs=72.8
Q ss_pred CcEEEEEEeCCceEEEEEeCCCCeEEEEEechhHhhhcccCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEecCCCcchhh
Q 033657 18 PYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHG 97 (114)
Q Consensus 18 ~~RL~V~~Snkhi~Aqvid~~~~~~lasaST~e~~~k~~l~~~~n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~~~yhG 97 (114)
...+.|+-|.++...+|.| .+|.+++.+|+-...+++.. .+.--||...++.++++|+|.||+.+.+..+|.- -|
T Consensus 29 ~gi~hI~as~NNTivtiTD-~~G~~i~~~SaG~~GfKg~r--ksTp~AA~~aa~~~~~~a~e~Gi~~v~V~vkG~G--~G 103 (140)
T 3bbn_K 29 KGVIHVQASFNNTIVTVTD-VRGRVVSWASAGTCGFRGTK--RGTPFAAQTAAGNAIRTVVEQGMQRAEVMIKGPG--LG 103 (140)
T ss_dssp CCEEEEEECSSCEEEEEEC-SSSCEEEEEETTTSSCCTTS--CSSHHHHHHHHTSGGGTSTTTCCCEEEEEEESCS--TT
T ss_pred eeEEEEEecCCCEEEEEEc-CCCCEEEEEeccceeEcccc--cCCHHHHHHHHHHHHHHHHHhCCeEEEEEEECCC--Cc
Confidence 4789999999999999998 56778878888777777653 5678899999999999999999999888776521 24
Q ss_pred HHHHHHHHHHHcCccc
Q 033657 98 KVKAVIDSLREAGVKL 113 (114)
Q Consensus 98 rV~a~~~~lre~Gl~~ 113 (114)
| ++++.+|...||++
T Consensus 104 R-eaairaL~~~Gl~I 118 (140)
T 3bbn_K 104 R-DAALRAIRRSGILL 118 (140)
T ss_dssp S-SHHHHHHHTTTCEE
T ss_pred H-HHHHHHHHHCCCEE
Confidence 4 46788888889875
No 17
>3u5c_O RP59A, 40S ribosomal protein S14-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_K 3o30_H 3o2z_H 3u5g_O 1s1h_K 3jyv_K*
Probab=97.28 E-value=0.00049 Score=48.82 Aligned_cols=98 Identities=15% Similarity=0.088 Sum_probs=68.1
Q ss_pred cCCCCCcEEEEEEeCCceEEEEEeCCCCeEEEEEechhHhhhcccCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEecCC-
Q 033657 13 SNFLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKR- 91 (114)
Q Consensus 13 ~~~~~~~RL~V~~Snkhi~Aqvid~~~~~~lasaST~e~~~k~~l~~~~n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~- 91 (114)
++....-.+.|+-|-++...+|.|.. |.++...|+-...+|+.. ..+.--||...++.++++|+|.||+.+.+..|+
T Consensus 9 ~~~~~~gi~hI~asfNNTivtvTD~~-G~~~~~~ssG~~gfKg~r-~ksTpyAAq~aa~~~a~~a~e~Gi~~v~V~vra~ 86 (137)
T 3u5c_O 9 DNSQVFGVARIYASFNDTFVHVTDLS-GKETIARVTGGMKVKADR-DESSPYAAMLAAQDVAAKCKEVGITAVHVKIRAT 86 (137)
T ss_dssp --CCCEEECCEEEETTEEEECCEETT-SSSCCCCCBTTTTSCCST-TTTCHHHHHHHHHHHHHHHHHHTCCEEECEEECS
T ss_pred cCceeeEEEEEEccCCCEEEEEEcCC-CCEEEEEeCCCcEEeCCc-ccCCHHHHHHHHHHHHHHHHHcCCeEEEEEEecc
Confidence 33444456779999999999999955 444445566555665521 135677999999999999999999998877652
Q ss_pred -Ccch----hhHHHHHHHHHHHcCccc
Q 033657 92 -EQRY----HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 92 -~~~y----hGrV~a~~~~lre~Gl~~ 113 (114)
|.+. -| -++++.+|..+||++
T Consensus 87 gg~~~kgpG~G-r~sairaL~~~Gl~I 112 (137)
T 3u5c_O 87 GGTRTKTPGPG-GQAALRALARSGLRI 112 (137)
T ss_dssp CTTSCCSCCGG-GHHHHHHHHTTTCEE
T ss_pred CCCcccCCCcc-hHHHHHHHHhCCCEE
Confidence 2211 23 456677888889876
No 18
>3b09_A Peptidyl-prolyl CIS-trans isomerase; Val-Leu zipper, helices, chaperone; 1.90A {Shewanella}
Probab=76.31 E-value=3.5 Score=26.48 Aligned_cols=34 Identities=24% Similarity=0.377 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHH
Q 033657 63 VAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLRE 108 (114)
Q Consensus 63 ~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre 108 (114)
-.++|.+|..+|+..++.|++++ | +.+|++++++
T Consensus 30 ~K~SYaIG~~mG~~L~~~g~~~l--D----------~dav~~Gl~D 63 (88)
T 3b09_A 30 QHASYGVGRQMGEQLAANSFEGI--D----------IPAVQAGLAD 63 (88)
T ss_dssp HHHHHHHHHHHHHHHHHSCCTTC--C----------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcccc--C----------HHHHHHHHHH
Confidence 35899999999999999888763 4 4556666554
No 19
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=74.77 E-value=3.5 Score=35.49 Aligned_cols=40 Identities=8% Similarity=0.077 Sum_probs=32.4
Q ss_pred HHHHHhhCCCCEEEEecCCC------------------cchhhHHHHHHHHHHHcCccc
Q 033657 73 LGERLLLKDIPAVTVFLKRE------------------QRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 73 la~R~~e~gI~~v~~d~r~~------------------~~yhGrV~a~~~~lre~Gl~~ 113 (114)
+|++|++.|++-+++|+ |= .++-+-+++++|.+++.||+|
T Consensus 351 ~ad~aa~lG~e~fviDD-GWf~~r~~d~~~lGdW~~d~~kFP~Glk~Lad~vh~~Gmkf 408 (729)
T 4fnq_A 351 IAKTEAELGIELFVLDD-GWFGKRDDDRRSLGDWIVNRRKLPNGLDGLAKQVNELGMQF 408 (729)
T ss_dssp HHHHHHHHTCCEEEECS-CCBTTCCSTTSCTTCCSBCTTTCTTHHHHHHHHHHHTTCEE
T ss_pred HHHHHHhcCccEEEEcc-eeecCCCCCcccCCcEEEChhhcCccHHHHHHHHHHCCCEE
Confidence 67889999999999997 31 123345999999999999987
No 20
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=73.69 E-value=11 Score=27.09 Aligned_cols=46 Identities=15% Similarity=0.036 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCc---chhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQ---RYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~---~yhGrV~a~~~~lre~Gl~~ 113 (114)
+..|+.+++.+.+.|..++.|- .+.. ....|...|.+++++.|+.+
T Consensus 112 ~~~g~~a~~~L~~~G~~~I~~i-~~~~~~~~~~~R~~gf~~~l~~~g~~~ 160 (288)
T 3gv0_A 112 EAYAYEAVERLAQCGRKRIAVI-VPPSRFSFHDHARKGFNRGIRDFGLTE 160 (288)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEE-CCCTTSHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHCCCCeEEEE-cCCcccchHHHHHHHHHHHHHHcCCCc
Confidence 4456677777788899998775 2332 23559999999999999864
No 21
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=72.89 E-value=7.6 Score=27.55 Aligned_cols=46 Identities=9% Similarity=0.090 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCcc-hhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQR-YHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~~-yhGrV~a~~~~lre~Gl~~ 113 (114)
+..|+.+++.+.+.|..++.|- .+... ...|...|.+++++.|+.+
T Consensus 103 ~~~g~~a~~~L~~~G~~~i~~i-~~~~~~~~~R~~gf~~~l~~~~~~~ 149 (280)
T 3gyb_A 103 FRGAEIATKHLIDLGHTHIAHL-RVGSGAGLRRFESFEATMRAHGLEP 149 (280)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEE-CCSSHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHCCCCeEEEE-eCCCchHHHHHHHHHHHHHHcCcCC
Confidence 3445666666667799988775 33322 5679999999999999864
No 22
>1byk_A Protein (trehalose operon repressor); LACI family, phosphate binding, protein structure, trehalose repressor, gene regulation; HET: T6P; 2.50A {Escherichia coli} SCOP: c.93.1.1
Probab=72.56 E-value=11 Score=26.36 Aligned_cols=44 Identities=14% Similarity=0.061 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCC----cchhhHHHHHHHHHHHcCcc
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKRE----QRYHGKVKAVIDSLREAGVK 112 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~----~~yhGrV~a~~~~lre~Gl~ 112 (114)
..|+.+++.+.+.|..++.|- .+. .....|...|.+++++.|+.
T Consensus 101 ~~~~~a~~~L~~~G~~~I~~i-~~~~~~~~~~~~R~~gf~~al~~~g~~ 148 (255)
T 1byk_A 101 GAIKILMQRLYDQGHRNISYL-GVPHSDVTTGKRRHEAYLAFCKAHKLH 148 (255)
T ss_dssp HHHHHHHHHHHHTTCCCEEEE-CCCTTSTTTTHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHcCCCeEEEE-ecCCCCcccHHHHHHHHHHHHHHcCCC
Confidence 345566666667799988765 232 22357999999999999985
No 23
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=70.80 E-value=13 Score=26.15 Aligned_cols=45 Identities=20% Similarity=0.297 Sum_probs=32.1
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCCc-------chh-hHHHHHHHHHHHcCccc
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKREQ-------RYH-GKVKAVIDSLREAGVKL 113 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~~-------~yh-GrV~a~~~~lre~Gl~~ 113 (114)
..|+.+++.+.+.|..++.|-. +.. ... .|...|.+++++.|+.+
T Consensus 100 ~~~~~a~~~L~~~G~~~i~~i~-~~~~~~~~~~~~~~~R~~gf~~~l~~~g~~~ 152 (276)
T 2h0a_A 100 LGGRLAGAYLARFPGPIFAIAV-EEEPDRAFRRTVFAERMAGFQEALKEAGRPF 152 (276)
T ss_dssp HHHHHHHHHHTTSSSCEEEEEE-CCSCCC---CCHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHcCCCeEEEEe-cCcccccccchhHHHHHHHHHHHHHHcCCCC
Confidence 3455666666777999886642 322 235 78999999999999864
No 24
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=70.61 E-value=10 Score=27.05 Aligned_cols=46 Identities=11% Similarity=0.163 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCc---chhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQ---RYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~---~yhGrV~a~~~~lre~Gl~~ 113 (114)
+..|+.+++.+.+.|..++.|- .+.. ....|...|.+++++.|+.+
T Consensus 110 ~~~g~~a~~~L~~~G~~~i~~i-~~~~~~~~~~~R~~gf~~~l~~~g~~~ 158 (291)
T 3egc_A 110 VRGARTAVEYLIARGHTRIGAI-VGSAGLMTSRERLKGFRAAMSAAGLPV 158 (291)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEE-CSCTTSHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEE-eCCCCCcCHHHHHHHHHHHHHHcCCCC
Confidence 3445666666677799988765 2332 34669999999999999864
No 25
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=69.66 E-value=11 Score=26.45 Aligned_cols=46 Identities=11% Similarity=0.098 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCc---chhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQ---RYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~---~yhGrV~a~~~~lre~Gl~~ 113 (114)
+..|+.+++.+.+.|..++.|-. +.. ....|...|.+++.+.|+.+
T Consensus 105 ~~~~~~a~~~L~~~G~~~i~~i~-~~~~~~~~~~R~~gf~~~l~~~g~~~ 153 (275)
T 3d8u_A 105 FEVGKACTRHLIEQGFKNVGFIG-ARGNHSTLQRQLHGWQSAMIENYLTP 153 (275)
T ss_dssp HHHHHHHHHHHHTTTCCCEEEEE-CSCSSHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHCCCCeEEEEc-CCCCCchHHHHHHHHHHHHHHcCCCC
Confidence 34566666677777988876652 322 23569999999999999853
No 26
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=69.20 E-value=10 Score=27.24 Aligned_cols=46 Identities=13% Similarity=0.025 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCc---chhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQ---RYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~---~yhGrV~a~~~~lre~Gl~~ 113 (114)
+..|+.+++.+.+.|..++.|-. +.. ....|...|.+++++.|+.+
T Consensus 116 ~~~g~~a~~~L~~~G~~~I~~i~-~~~~~~~~~~R~~Gf~~al~~~g~~~ 164 (301)
T 3miz_A 116 YQGARDLTRYLLERGHRRIGYIR-LNPILLGAELRLDAFRRTTSEFGLTE 164 (301)
T ss_dssp HHHHHHHHHHHHTTTCCSEEEEE-CCTTSHHHHHHHHHHHHHHHHHTCCG
T ss_pred HHHHHHHHHHHHHcCCCeEEEEe-cCccchhHHHHHHHHHHHHHHcCCCC
Confidence 34566666777778999887652 322 23579999999999999864
No 27
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=68.80 E-value=12 Score=26.57 Aligned_cols=46 Identities=13% Similarity=0.142 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCc---chhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQ---RYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~---~yhGrV~a~~~~lre~Gl~~ 113 (114)
+..|+.+++.+.+.|..++.|-. +.. ....|...|.+++++.|+.+
T Consensus 116 ~~~g~~a~~~L~~~G~~~i~~i~-~~~~~~~~~~R~~gf~~~l~~~g~~~ 164 (292)
T 3k4h_A 116 YTAAREVAEYLISLGHKQIAFIG-GGSDLLVTRDRLAGMSDALKLADIVL 164 (292)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEE-SCTTBHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHCCCceEEEEe-CcccchhHHHHHHHHHHHHHHcCCCC
Confidence 34566666677778999887652 322 23568999999999999864
No 28
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=68.64 E-value=12 Score=26.57 Aligned_cols=45 Identities=18% Similarity=0.302 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCC---cchhhHHHHHHHHHHHcCccc
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKRE---QRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~---~~yhGrV~a~~~~lre~Gl~~ 113 (114)
..|+.+++.+.+.|..++.|- .+. .....|...|.+++.+.|+.+
T Consensus 112 ~~~~~~~~~L~~~G~~~i~~i-~~~~~~~~~~~R~~g~~~~l~~~g~~~ 159 (289)
T 1dbq_A 112 EGGYMAGRYLIERGHREIGVI-PGPLERNTGAGRLAGFMKAMEEAMIKV 159 (289)
T ss_dssp HHHHHHHHHHHHTTCCSEEEE-CCC------CHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHCCCCeEEEE-ecCCccccHHHHHHHHHHHHHHCCCCC
Confidence 345666666667798888665 232 124679999999999999864
No 29
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=68.50 E-value=5.1 Score=27.06 Aligned_cols=35 Identities=11% Similarity=0.085 Sum_probs=27.1
Q ss_pred HHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 74 GERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 74 a~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
.+.|.++|+..++++. +.. -..+++.+++.|+.++
T Consensus 86 ~~~~~~~g~~~i~~~~-~~~-----~~~l~~~a~~~Gi~~i 120 (138)
T 1y81_A 86 AKEAVEAGFKKLWFQP-GAE-----SEEIRRFLEKAGVEYS 120 (138)
T ss_dssp HHHHHHTTCCEEEECT-TSC-----CHHHHHHHHHHTCEEE
T ss_pred HHHHHHcCCCEEEEcC-ccH-----HHHHHHHHHHCCCEEE
Confidence 3558889999988874 543 4788899999999874
No 30
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=68.42 E-value=14 Score=26.47 Aligned_cols=46 Identities=13% Similarity=0.166 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCC---cchhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKRE---QRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~---~~yhGrV~a~~~~lre~Gl~~ 113 (114)
+..|+.+++.+.+.|..++.|- .+. .....|...|.+++.+.|+.+
T Consensus 110 ~~~g~~a~~~L~~~G~~~i~~i-~~~~~~~~~~~R~~gf~~~l~~~g~~~ 158 (290)
T 3clk_A 110 EDIGYQATNLLINEGHRQIGIA-GIDQYPYTGRKRLAGYKKALKEANIAI 158 (290)
T ss_dssp HHHHHHHHHHHHTTTCCSEEEE-SCCCCTTTHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEE-eCCCCCcchHHHHHHHHHHHHHcCCCC
Confidence 3456677777777898888664 232 234679999999999999864
No 31
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=68.25 E-value=11 Score=26.83 Aligned_cols=46 Identities=20% Similarity=0.311 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCc---chhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQ---RYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~---~yhGrV~a~~~~lre~Gl~~ 113 (114)
+..|+.+++.+.+.|..++.|-. +.. ....|...|.+++++.|+.+
T Consensus 112 ~~~~~~a~~~L~~~G~~~i~~i~-~~~~~~~~~~R~~gf~~~l~~~~~~~ 160 (289)
T 3g85_A 112 YKMGEKASLLFAKKRYKSAAAIL-TESLNDAMDNRNKGFIETCHKNGIKI 160 (289)
T ss_dssp HHHHHHHHHHHHHTTCCBCEEEE-CCCSSHHHHHHHHHHHHHHHHTTCBC
T ss_pred HHHHHHHHHHHHHcCCCEEEEEe-CCcccccHHHHHHHHHHHHHHcCCCC
Confidence 34566666777778988876652 322 23569999999999999864
No 32
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=68.05 E-value=12 Score=26.49 Aligned_cols=45 Identities=11% Similarity=0.121 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCCc---chhhHHHHHHHHHHHcCccc
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKREQ---RYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~~---~yhGrV~a~~~~lre~Gl~~ 113 (114)
..|+.+++.+.+.|..++.|- .+.. ....|...|.+++.+.|+++
T Consensus 125 ~~~~~a~~~l~~~G~~~I~~i-~~~~~~~~~~~R~~gf~~~l~~~g~~~ 172 (296)
T 3brq_A 125 QTSFNAVAELINAGHQEIAFL-TGSMDSPTSIERLAGYKDALAQHGIAL 172 (296)
T ss_dssp HHHHHHHHHHHHTTCCSEEEE-CCCTTCHHHHHHHHHHHHHHHTTTCCC
T ss_pred HHHHHHHHHHHHCCCceEEEE-cCCCCCccHHHHHHHHHHHHHHcCCCC
Confidence 345666666667798888765 2321 23568999999999999864
No 33
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=67.67 E-value=1.7 Score=31.70 Aligned_cols=46 Identities=17% Similarity=0.268 Sum_probs=35.9
Q ss_pred HHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 69 IGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 69 vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
+|++.++.|++.|++-|.+...-...+.+-+..+.+.+++.|+..|
T Consensus 70 tGei~~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~Gl~~i 115 (219)
T 2h6r_A 70 TGHILAEAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLGLETI 115 (219)
T ss_dssp TTCCCHHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHTCEEE
T ss_pred cCchHHHHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCCCeEE
Confidence 6777789999999999988531113556779999999999999653
No 34
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=67.02 E-value=12 Score=26.50 Aligned_cols=46 Identities=9% Similarity=0.010 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCC---cchhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKRE---QRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~---~~yhGrV~a~~~~lre~Gl~~ 113 (114)
+..|+.+++.+.+.|..++.|-. +. .....|...|.+++++.|+++
T Consensus 103 ~~~~~~a~~~L~~~G~~~i~~i~-~~~~~~~~~~R~~gf~~~l~~~g~~~ 151 (277)
T 3cs3_A 103 RGGATQAIEQFVNVGSKKVLLLS-GPEKGYDSQERLAVSTRELTRFGIPY 151 (277)
T ss_dssp HHHHHHHHHHHHHTTCSCEEEEE-CCTTSHHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHHcCCceEEEEe-CCccCccHHHHHHHHHHHHHHcCCCe
Confidence 34566666777777988886652 32 224569999999999999864
No 35
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=66.93 E-value=12 Score=27.07 Aligned_cols=46 Identities=17% Similarity=0.258 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCC---cchhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKRE---QRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~---~~yhGrV~a~~~~lre~Gl~~ 113 (114)
+..|+.+++.+.+.|..++.|-. +. .....|...|.+++++.|+.+
T Consensus 116 ~~~g~~a~~~L~~~G~~~I~~i~-~~~~~~~~~~R~~Gf~~al~~~g~~~ 164 (303)
T 3kke_A 116 QKGGGIATEHLITLGHSRIAFIS-GTAIHDTAQRRKEGYLETLASAGLRS 164 (303)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEE-SCSSCHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHCCCCeEEEEe-CCCcCccHHHHHHHHHHHHHHcCCCC
Confidence 34466666677778999887652 32 234569999999999999864
No 36
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=66.92 E-value=4.9 Score=26.95 Aligned_cols=35 Identities=14% Similarity=0.092 Sum_probs=25.7
Q ss_pred HHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 74 GERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 74 a~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
.+.|.++|++.++|- .|.. =..+++.+|++||.++
T Consensus 75 v~e~~~~g~k~v~~~--~G~~----~~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 75 YNYILSLKPKRVIFN--PGTE----NEELEEILSENGIEPV 109 (122)
T ss_dssp HHHHHHHCCSEEEEC--TTCC----CHHHHHHHHHTTCEEE
T ss_pred HHHHHhcCCCEEEEC--CCCC----hHHHHHHHHHcCCeEE
Confidence 466778899987554 3443 2589999999999864
No 37
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=66.82 E-value=16 Score=26.23 Aligned_cols=46 Identities=4% Similarity=-0.026 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCC--cchhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKRE--QRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~--~~yhGrV~a~~~~lre~Gl~~ 113 (114)
+.-|+.+++.+.+.|..++.|- .+. .....|.+.|.+++++.|+.+
T Consensus 111 ~~~~~~a~~~L~~~G~~~I~~i-~~~~~~~~~~R~~Gf~~al~~~g~~~ 158 (289)
T 3k9c_A 111 VAGITLAVDHLTELGHRNIAHI-DGADAPGGADRRAGFLAAMDRHGLSA 158 (289)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEE-CCTTSTTHHHHHHHHHHHHHHTTCGG
T ss_pred HHHHHHHHHHHHHCCCCcEEEE-eCCCCccHHHHHHHHHHHHHHCCCCC
Confidence 3345566666667799888765 232 234679999999999999874
No 38
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=66.63 E-value=12 Score=26.93 Aligned_cols=45 Identities=13% Similarity=0.022 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCCc----chhhHHHHHHHHHHHcCccc
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKREQ----RYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~~----~yhGrV~a~~~~lre~Gl~~ 113 (114)
..|+.+++.+.+.|..++.|-. +.. ....|...|.+++++.|+++
T Consensus 119 ~~g~~a~~~L~~~G~~~I~~i~-~~~~~~~~~~~R~~Gf~~al~~~g~~~ 167 (289)
T 2fep_A 119 QAIYDAVKLLVDKGHTDIAFVS-GPMAEPINRSKKLQGYKRALEEANLPF 167 (289)
T ss_dssp HHHHHHHHHHHHTTCSSEEEEE-SCTTSHHHHTTHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHCCCCeEEEEe-CCccccccHHHHHHHHHHHHHHcCCCC
Confidence 3455566666667988886652 332 23569999999999999864
No 39
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=66.22 E-value=12 Score=27.01 Aligned_cols=46 Identities=2% Similarity=0.073 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCC---cchhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKRE---QRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~---~~yhGrV~a~~~~lre~Gl~~ 113 (114)
+..|+.+++.+.+.|..++.|-. +. .....|...|.+++++.|+.+
T Consensus 116 ~~~~~~a~~~L~~~G~~~I~~i~-~~~~~~~~~~R~~Gf~~al~~~g~~~ 164 (295)
T 3hcw_A 116 ILASENLTRHVIEQGVDELIFIT-EKGNFEVSKDRIQGFETVASQFNLDY 164 (295)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEEE-ESSCCHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHcCCccEEEEc-CCccchhHHHHHHHHHHHHHHcCCCe
Confidence 34455666666667999887652 32 234569999999999999864
No 40
>3qi7_A Putative transcriptional regulator; periplasmic binding protein-like, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.86A {Clostridium difficile}
Probab=66.05 E-value=8.4 Score=30.86 Aligned_cols=46 Identities=15% Similarity=0.303 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCc--c---hhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQ--R---YHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~--~---yhGrV~a~~~~lre~Gl~~ 113 (114)
+.=|++.++.+++.|.+++.|- .+.. . ..-|.+.+.+++.+.||.|
T Consensus 141 ~~Ggy~A~~~Li~~Ghk~Ia~I-sgp~~~~~~~~~~R~~Gyk~Al~e~Gi~~ 191 (371)
T 3qi7_A 141 EERGKVLAERSKEMGAKAFIHY-ASTDDLKDVNIAKRLEMIKETCKNIGLPF 191 (371)
T ss_dssp HHHHHHHHHHHHHTTCSCEEEE-EETTGGGSHHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHHCCCCEEEEE-eccccccchhHHHHHHHHHHHHHHcCCCc
Confidence 3457777889999999998764 3432 1 2338999999999999976
No 41
>2qu7_A Putative transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus saprophyticus subsp}
Probab=65.93 E-value=13 Score=26.41 Aligned_cols=45 Identities=16% Similarity=0.217 Sum_probs=31.6
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCC---cchhhHHHHHHHHHHHcCccc
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKRE---QRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~---~~yhGrV~a~~~~lre~Gl~~ 113 (114)
..|+.+++.+.+.|..++.|-. +. .....|...|.+++++.|+.+
T Consensus 108 ~~g~~a~~~L~~~G~~~I~~i~-~~~~~~~~~~R~~gf~~~l~~~g~~~ 155 (288)
T 2qu7_A 108 EAAYIATKRVLESTCKEVGLLL-ANPNISTTIGRKNGYNKAISEFDLNV 155 (288)
T ss_dssp HHHHHHHHHHHTSSCCCEEEEE-CCTTSHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHcCCCcEEEEe-cCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3455666666677988876642 32 223568999999999999864
No 42
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=65.92 E-value=12 Score=26.77 Aligned_cols=45 Identities=7% Similarity=0.150 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCCc---chhhHHHHHHHHHHHcCccc
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKREQ---RYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~~---~yhGrV~a~~~~lre~Gl~~ 113 (114)
..|+.+++.+.+.|..++.|-. +.. ....|...|.+++++.|+++
T Consensus 110 ~~g~~a~~~L~~~G~~~I~~i~-~~~~~~~~~~R~~gf~~~l~~~g~~~ 157 (285)
T 3c3k_A 110 AASEYVVDQLVKSGKKRIALIN-HDLAYQYAQHRESGYLNRLKFHGLDY 157 (285)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEE-CCTTSHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHcCCCeEEEEe-CCCccccHHHHHHHHHHHHHHcCCCc
Confidence 3456666666677988876642 322 24568999999999999864
No 43
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=65.68 E-value=12 Score=26.86 Aligned_cols=46 Identities=20% Similarity=0.250 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHhhCC--CCEEEEecCCC---cchhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKD--IPAVTVFLKRE---QRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~g--I~~v~~d~r~~---~~yhGrV~a~~~~lre~Gl~~ 113 (114)
+..|+.+++.+.+.| -.++.+- .+. .....|.+.|.+++.+.|+++
T Consensus 113 ~~~g~~a~~~l~~~g~~~~~i~~i-~g~~~~~~~~~R~~Gf~~~l~~~g~~~ 163 (297)
T 3rot_A 113 LLAGKKLGEKALELTPSAKRALVL-NPQPGHIGLEKRAYGIKTILQDKGIFF 163 (297)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEE-ESCTTCHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHhcCCCceEEEE-eCCCCcHHHHHHHHHHHHHHHhcCCeE
Confidence 334555666666667 7777664 232 223569999999999999875
No 44
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=64.31 E-value=5.3 Score=27.04 Aligned_cols=36 Identities=17% Similarity=0.132 Sum_probs=27.0
Q ss_pred HHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 73 LGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 73 la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
+++.|.++|+..+++.. +.. -..+++.+++.|+.++
T Consensus 93 vv~~~~~~gi~~i~~~~-g~~-----~~~l~~~a~~~Gi~vv 128 (144)
T 2d59_A 93 YVEQAIKKGAKVVWFQY-NTY-----NREASKKADEAGLIIV 128 (144)
T ss_dssp HHHHHHHHTCSEEEECT-TCC-----CHHHHHHHHHTTCEEE
T ss_pred HHHHHHHcCCCEEEECC-Cch-----HHHHHHHHHHcCCEEE
Confidence 34678889999887663 433 4788899999999764
No 45
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=64.28 E-value=15 Score=26.06 Aligned_cols=47 Identities=17% Similarity=0.143 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHhhCCCCEEEEec-CCCcchhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFL-KREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~-r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
+..|+.+++.+.+.|..++.+-. ........|...|.+++++.|+.+
T Consensus 122 ~~~~~~a~~~L~~~G~~~i~~i~~~~~~~~~~R~~gf~~~l~~~g~~~ 169 (298)
T 3tb6_A 122 VKGGMMAAEHLLSLGHTHMMGIFKADDTQGVKRMNGFIQAHRERELFP 169 (298)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEESSSHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHCCCCcEEEEcCCCCccHHHHHHHHHHHHHHcCCCC
Confidence 44566667777777988776542 112334579999999999999864
No 46
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=64.18 E-value=15 Score=28.13 Aligned_cols=75 Identities=8% Similarity=-0.017 Sum_probs=48.6
Q ss_pred eEEEEEeCCCCeEEEEEechhHhhhcccCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHc
Q 033657 30 VSAQVIHSPTATVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREA 109 (114)
Q Consensus 30 i~Aqvid~~~~~~lasaST~e~~~k~~l~~~~n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~ 109 (114)
+.--++.+++-.=.+-.||-...-+.. ...-++++|. .-+++.|++.+.|++=+|.++-.-++|+++++-++
T Consensus 115 ~VNaLvsPTG~~G~VkIsTGp~Ss~~~-~~~V~vetAi-------aml~dmG~~SvKffPm~Gl~~l~E~~avAka~a~~ 186 (249)
T 3m0z_A 115 VVNGLVSPTGTPGMVKISTGPLSSGAA-DGIVPLETAI-------ALLKDMGGSSIKYFPMGGLKHRAEFEAVAKACAAH 186 (249)
T ss_dssp EEEEEEBCCSSTTEEECCCSTTGGGSS-CCEEEHHHHH-------HHHHHTTCCEEEECCCTTTTTHHHHHHHHHHHHHT
T ss_pred EEEEEEcCCCccceEEeccCccccCCC-CceeeHHHHH-------HHHHHcCCCeeeEeecCCcccHHHHHHHHHHHHHc
Confidence 334455655433333445544432221 1123455553 34678999999999878888888999999999999
Q ss_pred Ccc
Q 033657 110 GVK 112 (114)
Q Consensus 110 Gl~ 112 (114)
|+-
T Consensus 187 g~~ 189 (249)
T 3m0z_A 187 DFW 189 (249)
T ss_dssp TCE
T ss_pred Cce
Confidence 983
No 47
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=64.03 E-value=13 Score=26.92 Aligned_cols=46 Identities=4% Similarity=-0.073 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCc---chhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQ---RYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~---~yhGrV~a~~~~lre~Gl~~ 113 (114)
+..|+.+++.+.+.|-.++.|-. +.. ....|...|.+++++.|+.+
T Consensus 129 ~~~g~~a~~~L~~~G~~~I~~i~-~~~~~~~~~~R~~Gf~~~l~~~g~~~ 177 (305)
T 3huu_A 129 IDAAYQLTQYLYHLGHRHILFLQ-ESGHYAVTEDRSVGFKQYCDDVKISN 177 (305)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEE-ESSCBHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHCCCCeEEEEc-CCcccchhHHHHHHHHHHHHHcCCCc
Confidence 44566667777778988876652 322 23569999999999999875
No 48
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=64.02 E-value=14 Score=27.11 Aligned_cols=46 Identities=11% Similarity=0.125 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCC---cchhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKRE---QRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~---~~yhGrV~a~~~~lre~Gl~~ 113 (114)
+.-|+.+++.+.+.|..++.|- .+. .....|...|.+++++.|+.+
T Consensus 166 ~~~~~~a~~~L~~~G~~~I~~i-~~~~~~~~~~~R~~Gf~~al~~~g~~~ 214 (338)
T 3dbi_A 166 KQTSFNAVAELINAGHQEIAFL-TGSMDSPTSIERLAGYKDALAQHGIAL 214 (338)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEE-CCCTTCHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHCCCCEEEEE-eCCCCCccHHHHHHHHHHHHHHCCCCC
Confidence 4456667777778899998775 232 224569999999999999864
No 49
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=63.90 E-value=14 Score=24.41 Aligned_cols=52 Identities=8% Similarity=0.102 Sum_probs=37.0
Q ss_pred CHHHHHHHHHHHHHHHhhCCC-CEEEEecCCCc----chhhHHHHHHHHHHHcCccc
Q 033657 62 DVAAASKIGKILGERLLLKDI-PAVTVFLKREQ----RYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 62 n~~Aa~~vG~~la~R~~e~gI-~~v~~d~r~~~----~yhGrV~a~~~~lre~Gl~~ 113 (114)
|.+.+.+.+..+|..++++|- ++|.+.--|.- .-..-++...+.+++.|+.+
T Consensus 18 d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~v~L~~~~~~l~~~~~~~~~~Gv~~ 74 (117)
T 2fb6_A 18 NKDTVFNMLAMYALNSKNRGWWKHINIILWGASVKLVANDTQVQTEILEMLQSGITI 74 (117)
T ss_dssp CHHHHHHTHHHHHHHHHHHTSCSEEEEEECSHHHHHHHHCHHHHHHHHHHHHHTCEE
T ss_pred ChHHHHHHHHHHHHHHHHcCCCCcEEEEEECCeeeeccCCccHHHHHHHHHHcCCeE
Confidence 555565789999999999995 76655432321 12345888999999999865
No 50
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=63.07 E-value=12 Score=26.98 Aligned_cols=46 Identities=13% Similarity=0.184 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCC---cchhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKRE---QRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~---~~yhGrV~a~~~~lre~Gl~~ 113 (114)
+..|+.+++.+.+.|-.++.|-. +. .....|...|.+++++.|+.+
T Consensus 111 ~~~~~~a~~~L~~~G~~~I~~i~-~~~~~~~~~~R~~Gf~~al~~~g~~~ 159 (294)
T 3qk7_A 111 HAGASLAVKRLLELGHQRIAFVS-TDARISYVDQRLQGYVQTMSEAGLMP 159 (294)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEE-ESSCCHHHHHHHHHHHHHHHTTTCCC
T ss_pred HHHHHHHHHHHHHCCCceEEEEe-CCcccchHHHHHHHHHHHHHHCCCCC
Confidence 44566666677778998886652 32 234569999999999999864
No 51
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=62.40 E-value=12 Score=26.46 Aligned_cols=47 Identities=15% Similarity=0.182 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHhhCCCCEEEEecCCC---cchhhHHHHHHHHHHHcCccc
Q 033657 66 ASKIGKILGERLLLKDIPAVTVFLKRE---QRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 66 a~~vG~~la~R~~e~gI~~v~~d~r~~---~~yhGrV~a~~~~lre~Gl~~ 113 (114)
-+..|+.+++.+.+.|..++.|-. +. .....|...|.+++++.|+.+
T Consensus 106 ~~~~g~~a~~~L~~~G~~~i~~i~-~~~~~~~~~~R~~gf~~~l~~~~~~~ 155 (277)
T 3e61_A 106 HFKGGQLQAEVVRKGKGKNVLIVH-ENLLIDAFHQRVQGIKYILDQQRIDY 155 (277)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEEE-SCTTSHHHHHHHHHHHHHHHC---CE
T ss_pred hHHHHHHHHHHHHHCCCCeEEEEe-CCCCCccHHHHHHHHHHHHHHcCCCc
Confidence 455677778888888999887652 32 234569999999999999864
No 52
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=62.38 E-value=4.3 Score=27.60 Aligned_cols=34 Identities=15% Similarity=0.111 Sum_probs=26.1
Q ss_pred HHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 75 ERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 75 ~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
+.|.++|+..++++. +.. -..+++.+++.|+.++
T Consensus 88 ~~~~~~g~~~i~i~~-~~~-----~~~l~~~a~~~Gi~~i 121 (145)
T 2duw_A 88 QEAIAIGAKTLWLQL-GVI-----NEQAAVLAREAGLSVV 121 (145)
T ss_dssp HHHHHHTCCEEECCT-TCC-----CHHHHHHHHTTTCEEE
T ss_pred HHHHHcCCCEEEEcC-ChH-----HHHHHHHHHHcCCEEE
Confidence 446678999998874 443 5788899999999874
No 53
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=62.32 E-value=17 Score=26.32 Aligned_cols=47 Identities=15% Similarity=0.133 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
...++.+++-+.+.|.+++.+-..+..--..+.+.|.+++.+.|+++
T Consensus 120 ~~~~~~~~~~l~~~g~~~ia~i~~~~~~~~~~~~~~~~~l~~~g~~v 166 (362)
T 3snr_A 120 PIMGKVLYEHMKKNNVKTVGYIGYSDSYGDLWFNDLKKQGEAMGLKI 166 (362)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEEecCchHHHHHHHHHHHHHHHcCCEE
Confidence 44566667777778999886542222223568999999999999874
No 54
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans}
Probab=62.16 E-value=3.6 Score=32.56 Aligned_cols=54 Identities=19% Similarity=0.182 Sum_probs=38.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhCCCCEE-------EEecCCCcc----hhh-------HHHHHHHHHHHcCc
Q 033657 58 GCTRDVAAASKIGKILGERLLLKDIPAV-------TVFLKREQR----YHG-------KVKAVIDSLREAGV 111 (114)
Q Consensus 58 ~~~~n~~Aa~~vG~~la~R~~e~gI~~v-------~~d~r~~~~----yhG-------rV~a~~~~lre~Gl 111 (114)
..+.|.+.++.+|+.+|+.+...||+-. .-+++++-. |+. -..|+++++++.|+
T Consensus 102 aat~d~~l~~~~g~~~a~E~ra~Gi~~~~aPv~Dv~r~p~~~rig~RsfgeDP~lv~~~a~a~v~Glq~~gV 173 (351)
T 3tev_A 102 GAADDQQLTEDVNAALARQLRSVGINWNFTPVLDINVNPANPVIGDRAYGSDAARVTRHGRAALAGHTREGV 173 (351)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHTCCEECCCBCCCCCCTTCCSSGGGSSCSSHHHHHHHHHHHHHHHHTTTC
T ss_pred HhcCCHHHHHHHHHHHHHHHHHcCCCEeccceeEeccCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 3457899999999999999999999853 112222211 111 46788999999887
No 55
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=61.68 E-value=18 Score=26.51 Aligned_cols=45 Identities=9% Similarity=0.073 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCCc---chhhHHHHHHHHHHHcCccc
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKREQ---RYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~~---~yhGrV~a~~~~lre~Gl~~ 113 (114)
.-|+.+++.+.+.|..++.|- .+.. ....|...|.+++++.|+.+
T Consensus 166 ~~~~~a~~~L~~~G~~~I~~i-~~~~~~~~~~~R~~Gf~~al~~~g~~~ 213 (332)
T 2o20_A 166 LAAYQSTKKLIDSGNKKIAYI-MGSLKDVENTERMVGYQEALLEANIEF 213 (332)
T ss_dssp HHHHHHHHHHHHTTCSSEEEE-CSCTTSHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHCCCCeEEEE-eCCcccccHHHHHHHHHHHHHHcCCCC
Confidence 345566666677798888765 2332 23568999999999999864
No 56
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=61.48 E-value=15 Score=26.26 Aligned_cols=43 Identities=7% Similarity=0.183 Sum_probs=28.7
Q ss_pred HHHHHHHHhhCCCCEEEEecCCCc---chhhHHHHHHHHHHHcCccc
Q 033657 70 GKILGERLLLKDIPAVTVFLKREQ---RYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 70 G~~la~R~~e~gI~~v~~d~r~~~---~yhGrV~a~~~~lre~Gl~~ 113 (114)
|+.+++.+.+.|-.++.|- .+.. ....|...|.+++++.|+.+
T Consensus 113 g~~a~~~L~~~G~~~I~~i-~~~~~~~~~~~R~~Gf~~~l~~~g~~~ 158 (287)
T 3bbl_A 113 TRQAVEYLIGRGHRRIAIL-AWPEDSRVGNDRLQGYLEAMQTAQLPI 158 (287)
T ss_dssp HHHHHHHHHHHTCCCEEEE-ECCTTCHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHCCCCeEEEE-eCCcccccHHHHHHHHHHHHHHcCCCC
Confidence 4444444455588887664 2321 23568999999999999864
No 57
>3ctp_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; HET: XLF; 1.41A {Alkaliphilus metalliredigens}
Probab=61.38 E-value=17 Score=26.62 Aligned_cols=44 Identities=14% Similarity=0.161 Sum_probs=30.8
Q ss_pred HHHHHHHHHhhCCCCEEEEecCCCc---chhhHHHHHHHHHHHcCccc
Q 033657 69 IGKILGERLLLKDIPAVTVFLKREQ---RYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 69 vG~~la~R~~e~gI~~v~~d~r~~~---~yhGrV~a~~~~lre~Gl~~ 113 (114)
-|+.+++.+.+.|..++.|-. +.. ....|...|.+++++.|+.+
T Consensus 159 ~~~~a~~~L~~~G~~~I~~i~-~~~~~~~~~~R~~Gf~~al~~~g~~~ 205 (330)
T 3ctp_A 159 GGRMAFDHLYEKGCRKILHIK-GPEVFEATELRYKGFLDGARAKDLEI 205 (330)
T ss_dssp HHHHHHHHHHHTTCCSEEEEE-CCTTCHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHCCCCeEEEEe-CCccCccHHHHHHHHHHHHHHcCCCc
Confidence 355556666667988886642 321 23579999999999999864
No 58
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=61.33 E-value=16 Score=25.92 Aligned_cols=47 Identities=13% Similarity=0.188 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHhhCCC--CEEEEecC---C---CcchhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDI--PAVTVFLK---R---EQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI--~~v~~d~r---~---~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
+..|+.+++.+.+.|- .++.|-.. + ......|.+.|.+++++.|+.+
T Consensus 118 ~~~g~~a~~~l~~~g~~~~~i~~i~~~~~g~~~~~~~~~R~~gf~~~l~~~g~~~ 172 (304)
T 3gbv_A 118 HQSGYFAARMLMLLAVNDREIVIFRKIHEGVIGSNQQESREIGFRQYMQEHHPAC 172 (304)
T ss_dssp HHHHHHHHHHHHHHSTTCSEEEEEEEEBTTBCCCHHHHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEecccCCccchhHHHHHHHHHHHHHhhCCCc
Confidence 3445566666666666 77765410 1 1234679999999999999864
No 59
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=61.22 E-value=17 Score=25.97 Aligned_cols=45 Identities=13% Similarity=0.221 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCC---cchhhHHHHHHHHHHHcCccc
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKRE---QRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~---~~yhGrV~a~~~~lre~Gl~~ 113 (114)
..|+.+++.+.+.|..++.|-. +. .....|...|.+++++.|+++
T Consensus 114 ~~g~~a~~~L~~~G~~~I~~i~-~~~~~~~~~~R~~Gf~~al~~~g~~~ 161 (290)
T 2rgy_A 114 RGGELAAATLIEHGHRKLAVIS-GPFTASDNVERLDGFFDELARHGIAR 161 (290)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEE-SCTTCHHHHHHHHHHHHHHHTTTCCG
T ss_pred HHHHHHHHHHHHCCCceEEEEe-CCCCCccHHHHHHHHHHHHHHcCCCC
Confidence 3455566666667988876642 32 123568999999999999864
No 60
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=61.08 E-value=5.8 Score=31.99 Aligned_cols=52 Identities=10% Similarity=0.153 Sum_probs=41.1
Q ss_pred CCHHHHHHHHHH-----------------HHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCccc
Q 033657 61 RDVAAASKIGKI-----------------LGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 61 ~n~~Aa~~vG~~-----------------la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
.+.++|..+..+ +|..|.+.|++.+.+++ |..--..+++++.+.+++.|+.+
T Consensus 68 p~~~~a~al~~I~~~~~vPlvaDiHf~~~lal~a~e~G~dklRINP-GNig~~~~~~~vv~~ak~~~~pi 136 (366)
T 3noy_A 68 PHKEDVEALEEIVKKSPMPVIADIHFAPSYAFLSMEKGVHGIRINP-GNIGKEEIVREIVEEAKRRGVAV 136 (366)
T ss_dssp CSHHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHTTCSEEEECH-HHHSCHHHHHHHHHHHHHHTCEE
T ss_pred CChHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHhCCCeEEECC-cccCchhHHHHHHHHHHHcCCCE
Confidence 456777777665 78889999999999986 54444678999999999999753
No 61
>1qpz_A PURA, protein (purine nucleotide synthesis repressor); transcription regulation, DNA-binding, purine biosynthesis; HET: DNA HPA; 2.50A {Escherichia coli} SCOP: a.35.1.5 c.93.1.1 PDB: 1bdi_A* 1qp0_A* 1qp4_A* 1pnr_A* 1wet_A* 1zay_A* 1vpw_A* 2pue_A* 2puf_A* 2pug_A* 1bdh_A* 1qp7_A* 1qqa_A* 1qqb_A* 2puc_A* 2pua_A* 2pub_A* 2pud_A* 1jfs_A* 1jh9_A* ...
Probab=60.46 E-value=17 Score=26.75 Aligned_cols=44 Identities=18% Similarity=0.283 Sum_probs=30.3
Q ss_pred HHHHHHHHHhhCCCCEEEEecCCCc---chhhHHHHHHHHHHHcCccc
Q 033657 69 IGKILGERLLLKDIPAVTVFLKREQ---RYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 69 vG~~la~R~~e~gI~~v~~d~r~~~---~yhGrV~a~~~~lre~Gl~~ 113 (114)
.|+.+++.+.+.|..++.|- .+.. ....|...|.+++.+.|+.+
T Consensus 164 ~~~~a~~~L~~~G~~~I~~i-~g~~~~~~~~~R~~Gf~~al~~~g~~~ 210 (340)
T 1qpz_A 164 GGYMAGRYLIERGHREIGVI-PGPLERNTGAGRLAGFMKAMEEAMIKV 210 (340)
T ss_dssp HHHHHHHHHHHHTCCCEEEE-CCCTTSHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHCCCCEEEEE-eCCCccccHHHHHHHHHHHHHHCCCCC
Confidence 34455555556698888765 2322 23569999999999999864
No 62
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=59.93 E-value=20 Score=25.58 Aligned_cols=52 Identities=15% Similarity=0.238 Sum_probs=35.2
Q ss_pred CCHHHHHHHHHHHHHHHhh--------CCCCEEEEecCCC---cchhhHHHHHHHHHHHcCccc
Q 033657 61 RDVAAASKIGKILGERLLL--------KDIPAVTVFLKRE---QRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 61 ~n~~Aa~~vG~~la~R~~e--------~gI~~v~~d~r~~---~~yhGrV~a~~~~lre~Gl~~ 113 (114)
.|..+++.+++.|.+.+++ .|..++.+- .+. .....|...|.+++.+.|+.+
T Consensus 111 d~~~~g~~~~~~L~~~~~~~~~~~~~g~g~~~i~~i-~~~~~~~~~~~R~~gf~~~l~~~g~~~ 173 (309)
T 2fvy_A 111 DSKESGIIQGDLIAKHWAANQGWDLNKDGQIQFVLL-KGEPGHPDAEARTTYVIKELNDKGIKT 173 (309)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGCTTCSSSEEEEEE-ECSTTCHHHHHHHHHHHHHHHHTTCCE
T ss_pred CHHHHHHHHHHHHHHHHhhcccccccCCCceEEEEE-EcCCCCccHHHHHHHHHHHHHhcCCce
Confidence 3556777777777776643 676666543 222 224679999999999999853
No 63
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=59.91 E-value=16 Score=26.71 Aligned_cols=46 Identities=15% Similarity=0.093 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCc----chhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQ----RYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~----~yhGrV~a~~~~lre~Gl~~ 113 (114)
+.-|+.+++.+.+.|..++.|-. +.. ....|...|.+++++.|+.+
T Consensus 162 ~~~~~~a~~~L~~~G~~~I~~i~-~~~~~~~~~~~R~~Gf~~al~~~g~~~ 211 (332)
T 2hsg_A 162 EQAAFDAVQSLIDSGHKNIAFVS-GTLEEPINHAKKVKGYKRALTESGLPV 211 (332)
T ss_dssp HHHHHHHHHHHHTTTCSCEEEEE-SCTTSHHHHTTHHHHHHHHHHTTTCCC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEe-CCcccCccHHHHHHHHHHHHHHcCCCC
Confidence 34466667777778998887652 332 23569999999999999864
No 64
>2w4l_A DCMP deaminse, deoxycytidylate deaminase; pyrimidine metabolism, nucleotide biosynthesis, zinc, hexamer, hydrolase, metal-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=59.74 E-value=17 Score=25.93 Aligned_cols=40 Identities=15% Similarity=0.124 Sum_probs=25.9
Q ss_pred HHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCccc
Q 033657 73 LGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 73 la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
-++...++||++|+|-. ..|.-.....+-.+-|+++||++
T Consensus 110 Ca~aIi~agI~rVVy~~-~~~~d~~~~~~~~~~L~~aGI~V 149 (178)
T 2w4l_A 110 CAKLIIQAGIKEVIFMS-DKYHDSDEATAARLLFNMAGVTF 149 (178)
T ss_dssp HHHHHHHTTCCEEEEEE-CTTTTSHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHCCCEEEEEe-ccCCCCcchHHHHHHHHHCCCEE
Confidence 56777889999998752 21211112223478899999976
No 65
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=59.54 E-value=9 Score=31.17 Aligned_cols=41 Identities=15% Similarity=0.161 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
.+++.|++.+.+.||+.+..-+ | +.+..|++++.+.||+++
T Consensus 9 ~~a~~l~~~L~~~GV~~vfg~P-G-----~~~~~l~~al~~~~i~~i 49 (564)
T 2q28_A 9 DGMHIIVEALKQNNIDTIYGVV-G-----IPVTDMARHAQAEGIRYI 49 (564)
T ss_dssp EHHHHHHHHHHHTTCCEEEECC-C-----TTTHHHHHHHHHTTCEEE
T ss_pred cHHHHHHHHHHHcCCCEEEECC-C-----cchHHHHHHHHhCCCcEE
Confidence 3688999999999999985443 3 457778888887788763
No 66
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=59.51 E-value=6.5 Score=26.55 Aligned_cols=35 Identities=17% Similarity=0.087 Sum_probs=26.5
Q ss_pred HHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 74 GERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 74 a~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
.+.|.++|+..++++. +.. -..+++.+++.|+.++
T Consensus 87 ~~~~~~~gi~~i~~~~-g~~-----~~~~~~~a~~~Gir~v 121 (140)
T 1iuk_A 87 LPEVLALRPGLVWLQS-GIR-----HPEFEKALKEAGIPVV 121 (140)
T ss_dssp HHHHHHHCCSCEEECT-TCC-----CHHHHHHHHHTTCCEE
T ss_pred HHHHHHcCCCEEEEcC-CcC-----HHHHHHHHHHcCCEEE
Confidence 4677788999887763 443 3788899999999864
No 67
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=58.96 E-value=16 Score=27.15 Aligned_cols=46 Identities=13% Similarity=0.170 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCC---cc-hhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKRE---QR-YHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~---~~-yhGrV~a~~~~lre~Gl~~ 113 (114)
+.-|+.+++.+.+.|..++.|-. +. .. ...|...|.+++++.|+.+
T Consensus 172 ~~~~~~a~~~L~~~G~r~I~~i~-~~~~~~~~~~~R~~Gf~~al~~~g~~~ 221 (355)
T 3e3m_A 172 ERAAYDMTNALLARGFRKIVFLG-EKDDDWTRGAARRAGFKRAMREAGLNP 221 (355)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEE-ESSCTTSHHHHHHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHHHCCCCeEEEEc-cCcccChhHHHHHHHHHHHHHHCCcCC
Confidence 44566667777778998886642 32 12 4579999999999999864
No 68
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=58.89 E-value=16 Score=25.54 Aligned_cols=46 Identities=9% Similarity=0.086 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCC---cchhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKRE---QRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~---~~yhGrV~a~~~~lre~Gl~~ 113 (114)
+.-|+.+++.+.+.|..++.|-. +. .....|...|.+++++.|+++
T Consensus 105 ~~~~~~a~~~L~~~G~~~i~~i~-~~~~~~~~~~R~~gf~~~l~~~~~~~ 153 (272)
T 3o74_A 105 RDASRQLAASLLSSAPRSIALIG-ARPELSVSQARAGGFDEALQGYTGEV 153 (272)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEEE-ECTTSHHHHHHHHHHHHHTTTCCSEE
T ss_pred HHHHHHHHHHHHHCCCcEEEEEe-cCCCCccHHHHHHHHHHHHHHcCCCh
Confidence 44566777778888999887652 32 234569999999999999753
No 69
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=58.75 E-value=9.5 Score=31.13 Aligned_cols=41 Identities=12% Similarity=0.145 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
.++..|++.+.+.||+.+..-+ | +.+..|++++.+.||+++
T Consensus 11 ~~a~~l~~~L~~~GV~~vfg~P-G-----~~~~~l~~al~~~~i~~i 51 (568)
T 2c31_A 11 DGFHVLIDALKMNDIDTMYGVV-G-----IPITNLARMWQDDGQRFY 51 (568)
T ss_dssp EHHHHHHHHHHHTTCCEEEECC-C-----TTTHHHHHHHHHTTCEEE
T ss_pred cHHHHHHHHHHHcCCCEEEEeC-C-----CccHHHHHHHHhCCCcEE
Confidence 4688999999999999985443 3 457778888887788763
No 70
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=58.11 E-value=13 Score=27.84 Aligned_cols=39 Identities=10% Similarity=0.115 Sum_probs=29.1
Q ss_pred HHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 73 LGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 73 la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
++++|++.|++.+.+.|.+. ..| +..+.+.+++.||++|
T Consensus 22 lv~~A~~~Gl~~iaiTDH~~--~~g-~~~~~~~~~~~gi~vi 60 (292)
T 2yb1_A 22 VIDRAAARAPALLALTDHDC--TGG-LAEAAAAAARRGIPFL 60 (292)
T ss_dssp HHHHHHTTCCSEEEECCBTC--CTT-HHHHHHHHHHTTCCEE
T ss_pred HHHHHHHCCCCEEEEecCCc--ccc-HHHHHHHHHHcCCEEE
Confidence 89999999999999987543 223 3456667778898764
No 71
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=57.89 E-value=16 Score=28.34 Aligned_cols=38 Identities=13% Similarity=0.057 Sum_probs=33.0
Q ss_pred HHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcc
Q 033657 75 ERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVK 112 (114)
Q Consensus 75 ~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~ 112 (114)
.-+++.|++.+.|++=+|.++-.-++|+++++-+.|+-
T Consensus 175 aml~dmG~~SvKffPM~Gl~~leEl~avAkAca~~g~~ 212 (275)
T 3m6y_A 175 ALVRDMGGNSLKYFPMKGLAHEEEYRAVAKACAEEGFA 212 (275)
T ss_dssp HHHHHHTCCEEEECCCTTTTTHHHHHHHHHHHHHHTCE
T ss_pred HHHHHcCCCeeeEeecCCcccHHHHHHHHHHHHHcCce
Confidence 34677899999999878888888999999999999983
No 72
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=57.86 E-value=22 Score=26.04 Aligned_cols=46 Identities=11% Similarity=0.167 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCcc-hhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQR-YHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~~-yhGrV~a~~~~lre~Gl~~ 113 (114)
...|+.+++-+.+.|.+++.+-. .... -..+.+.|.+++.+.|+++
T Consensus 136 ~~~~~~~~~~l~~~g~~~ia~i~-~~~~~~~~~~~~~~~~l~~~G~~v 182 (375)
T 4evq_A 136 GQIGRATGDAMIKAGLKKAVTVT-WKYAAGEEMVSGFKKSFTAGKGEV 182 (375)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEE-ESSHHHHHHHHHHHHHHHHTTCEE
T ss_pred HhHHHHHHHHHHHcCCcEEEEEe-cCchHHHHHHHHHHHHHHHcCCeE
Confidence 34566677777778999876642 2333 3557999999999999875
No 73
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis}
Probab=57.60 E-value=32 Score=27.98 Aligned_cols=58 Identities=38% Similarity=0.499 Sum_probs=42.4
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEecCCCcchhhH--HHHHHHHHHHcCccc
Q 033657 54 RSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGK--VKAVIDSLREAGVKL 113 (114)
Q Consensus 54 k~~l~~~~n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGr--V~a~~~~lre~Gl~~ 113 (114)
++..+..-|-+-++.+|+-+|.-+.+.|-..|++=. ..++.+. -.++++++..+|+++
T Consensus 34 RG~~~~~lt~~~~~~ig~A~~~~l~~~~~~~VvVG~--D~R~ss~~~~~a~a~gl~a~Gi~V 93 (485)
T 3uw2_A 34 RGVIGKTLDADVARSIGRAFGSEVRAQGGDAVVVAR--DGRLSGPELVGALADGLRAAGVDV 93 (485)
T ss_dssp EEEBTTTBCHHHHHHHHHHHHHHHHHTTCCEEEEEE--CSCTTHHHHHHHHHHHHHHTTCEE
T ss_pred EEEeCCCCCHHHHHHHHHHHHHHHHHcCCCEEEEEE--CCCcCHHHHHHHHHHHHHHCCCEE
Confidence 333445568899999999999988877767776642 2345554 457789999999875
No 74
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=57.31 E-value=16 Score=27.21 Aligned_cols=47 Identities=15% Similarity=0.145 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecC--------C-----------CcchhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLK--------R-----------EQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r--------~-----------~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
+.-|+.+++.+.+.|..++.|-.. | ......|...|.+++++.|+.+
T Consensus 174 ~~~~~~a~~~L~~~G~r~I~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~R~~Gf~~al~~~g~~~ 239 (366)
T 3h5t_A 174 RKAIAPAAQALIDAGHRKIGILSIRLDRANNDGEVTRERLENAQYQVQRDRVRGAMEVFIEAGIDP 239 (366)
T ss_dssp HHHTHHHHHHHHHTTCCSEEEEEECCSSSCCCEECCHHHHHTCCCTTHHHHHHHHHHHHHHHTCCG
T ss_pred HHHHHHHHHHHHHCCCCcEEEEecccccccccCccccccccccccchHHHHHHHHHHHHHHCCCCC
Confidence 445666677777789888765420 1 1234569999999999999864
No 75
>3sg0_A Extracellular ligand-binding receptor; structural genomics, PSI-biology; HET: 173; 1.20A {Rhodopseudomonas palustris} PDB: 4dqd_A*
Probab=57.08 E-value=24 Score=25.86 Aligned_cols=46 Identities=15% Similarity=0.220 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCcch-hhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQRY-HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~~y-hGrV~a~~~~lre~Gl~~ 113 (114)
...++.+++-+.+.|.+++.+-. ....| .++...|.+++.+.|+++
T Consensus 144 ~~~~~~~~~~l~~~g~~~ia~i~-~~~~~~~~~~~~~~~~l~~~g~~v 190 (386)
T 3sg0_A 144 DIMAEAIGKYIAKTGAKKVGYIG-FSDAYGEGYYKVLAAAAPKLGFEL 190 (386)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEE-ESSHHHHHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEEe-cCchHHHHHHHHHHHHHHHcCCEE
Confidence 34556666667778999876542 23333 568999999999999875
No 76
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=56.93 E-value=41 Score=24.16 Aligned_cols=42 Identities=12% Similarity=0.128 Sum_probs=30.5
Q ss_pred HHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 72 ILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 72 ~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
..++-+.+.||..- +..-+.++.-.++..+++.+++.|+++|
T Consensus 24 ~a~~~l~~~gi~~e-v~V~SaHR~p~~~~~~~~~a~~~g~~Vi 65 (169)
T 3trh_A 24 TAFTELKSLGIPFE-AHILSAHRTPKETVEFVENADNRGCAVF 65 (169)
T ss_dssp HHHHHHHHTTCCEE-EEECCTTTSHHHHHHHHHHHHHTTEEEE
T ss_pred HHHHHHHHcCCCEE-EEEEcccCCHHHHHHHHHHHHhCCCcEE
Confidence 34455567898832 2223788889999999999999998753
No 77
>3e38_A Two-domain protein containing predicted PHP-like dependent phosphoesterase; structural genomics; 2.20A {Bacteroides vulgatus atcc 8482}
Probab=56.57 E-value=14 Score=28.98 Aligned_cols=42 Identities=14% Similarity=0.169 Sum_probs=29.4
Q ss_pred HHHHHhhCCCCEEEEecCCCcchh---------hHHHHHHHHHHHcCcccC
Q 033657 73 LGERLLLKDIPAVTVFLKREQRYH---------GKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 73 la~R~~e~gI~~v~~d~r~~~~yh---------GrV~a~~~~lre~Gl~~~ 114 (114)
++++|++.|++.+.+.|.+.+..+ ..+..+.+.+++.|+.+|
T Consensus 39 lv~~A~~~Gl~~iaiTDH~~~~~~~~~~~~d~~~g~~~~~~~a~~~gi~vi 89 (343)
T 3e38_A 39 RVDEAYRDGLDAISLTEHIEYRPHKQDVVSDHNRSFDLCREQAEKLGILLI 89 (343)
T ss_dssp HHHHHHHTTCSEECCEEESSCCTTTTTBCCCTTHHHHHHHHHHHHHTCEEC
T ss_pred HHHHHHHcCCCEEEECCCCcccccccccchhHHHHHHHHHHHHHhCCCEEE
Confidence 889999999999988876432211 234555666778888765
No 78
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=56.43 E-value=20 Score=25.59 Aligned_cols=22 Identities=14% Similarity=-0.052 Sum_probs=18.5
Q ss_pred HHHHHHhhCCCCEEEEecCCCc
Q 033657 72 ILGERLLLKDIPAVTVFLKREQ 93 (114)
Q Consensus 72 ~la~R~~e~gI~~v~~d~r~~~ 93 (114)
.++++|.+.|++.+.+.+....
T Consensus 20 e~v~~A~~~Gl~~iaiTDH~~~ 41 (267)
T 2yxo_A 20 AYLEEARAKGLKGVVFTDHSPM 41 (267)
T ss_dssp HHHHHHHHTTCSEEEEEEECCC
T ss_pred HHHHHHHHcCCCEEEEcCCCCC
Confidence 5789999999999999876543
No 79
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=56.42 E-value=12 Score=30.41 Aligned_cols=41 Identities=10% Similarity=0.171 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHc-CcccC
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREA-GVKLL 114 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~-Gl~~~ 114 (114)
.++..|++++.+.||+.+..-+ ++.+..|.+++.+. ||+++
T Consensus 4 ~~a~~l~~~L~~~GV~~vfg~P------G~~~~~l~dal~~~~~i~~i 45 (549)
T 3eya_A 4 TVAAYIAKTLESAGVKRIWGVT------GDSLNGLSDSLNRMGTIEWM 45 (549)
T ss_dssp BHHHHHHHHHHHTTCCEEEECC------CGGGHHHHHHHHHHCSSEEE
T ss_pred cHHHHHHHHHHHCCCCEEEEcC------CCchHHHHHHHHhcCCCeEE
Confidence 4688999999999999984432 44578888888876 77653
No 80
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=56.25 E-value=34 Score=24.69 Aligned_cols=39 Identities=18% Similarity=0.233 Sum_probs=29.8
Q ss_pred HHHHhhCCCC-EEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 74 GERLLLKDIP-AVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 74 a~R~~e~gI~-~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
++-+.+.||. ++.+ -+.++...++..+++.+++.|+++|
T Consensus 32 ~~~l~~~gi~~ev~V--~saHR~p~~l~~~~~~a~~~g~~Vi 71 (173)
T 4grd_A 32 VAILQEFGVPYEAKV--VSAHRMPDEMFDYAEKARERGLRAI 71 (173)
T ss_dssp HHHHHHTTCCEEEEE--CCTTTSHHHHHHHHHHHTTTTCSEE
T ss_pred HHHHHHcCCCEEEEE--EccccCHHHHHHHHHHHHhcCCeEE
Confidence 4455678988 3332 3788889999999999999998753
No 81
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=56.18 E-value=20 Score=26.17 Aligned_cols=46 Identities=11% Similarity=0.003 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCccc
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
..|+.+++-+.+.|.+++.+-..+..--..+.+.|.+++.+.|+++
T Consensus 125 ~~~~~~~~~l~~~g~~~ia~i~~~~~~~~~~~~~~~~~l~~~g~~v 170 (358)
T 3hut_A 125 FEGPNNAAWMIGDGFTSVAVIGVTTDWGLSSAQAFRKAFELRGGAV 170 (358)
T ss_dssp GHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHcCCCEEEEEecCcHHHHHHHHHHHHHHHHcCCEE
Confidence 3455666666777999876642122223568999999999999875
No 82
>2hc5_A ORF 99, hypothetical protein YVYC; NESG, GFT-PSI, protein structure initiative, northeast structural genomics consortium, alpha-beta, FLAG; NMR {Bacillus subtilis} SCOP: d.352.1.1
Probab=55.77 E-value=22 Score=23.85 Aligned_cols=31 Identities=16% Similarity=0.044 Sum_probs=26.7
Q ss_pred CCCCCcEEEEEEeCCceEEEEEeCCCCeEEE
Q 033657 14 NFLKPYVLRMHFTNKYVSAQVIHSPTATVAS 44 (114)
Q Consensus 14 ~~~~~~RL~V~~Snkhi~Aqvid~~~~~~la 44 (114)
......+..+......++.+|+|..+|.+|=
T Consensus 53 ~~n~~L~F~vdee~~~~vVkVvD~~TgEVIR 83 (117)
T 2hc5_A 53 PSQVHLKFELHDKLNEYYVKVIEDSTNEVIR 83 (117)
T ss_dssp TSSCCEEEEEEEETTEEEEEEEETTTTEEEE
T ss_pred hcCCceEEEEecCCCcEEEEEEECCCCcEEE
Confidence 3455678899999999999999999999993
No 83
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=54.94 E-value=14 Score=26.33 Aligned_cols=46 Identities=7% Similarity=0.163 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHhhCC-----CCEEEEecCCCc---chhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKD-----IPAVTVFLKREQ---RYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~g-----I~~v~~d~r~~~---~yhGrV~a~~~~lre~Gl~~ 113 (114)
+..|+.+++.+.+.| ..++.|- .+.. ....|...|.+++++.|+++
T Consensus 116 ~~~g~~a~~~l~~~g~~~~~~~~i~~i-~~~~~~~~~~~R~~gf~~~l~~~~~~~ 169 (304)
T 3o1i_D 116 YWMGYEAGKYLAERHPKGSGKTNIALL-LGPRTRGGTKPVTTGFYEAIKNSDIHI 169 (304)
T ss_dssp HHHHHHHHHHHHTTSBTTTCCEEEEEE-CCCC-----CHHHHHHHHTTTTBTEEE
T ss_pred HHHHHHHHHHHHHhcccCCCCCEEEEE-ECCCCcchHHHHHHHHHHHHhcCCCEE
Confidence 345666666777777 7787765 3332 23568999999999999875
No 84
>4fe7_A Xylose operon regulatory protein; HTH_ARAC, helix-turn-helix, PBP, periplasmic binding protein binding transcription regulator, DNA xylose; HET: XYS; 2.90A {Escherichia coli} PDB: 4fe4_A
Probab=54.44 E-value=29 Score=26.57 Aligned_cols=45 Identities=9% Similarity=-0.033 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCcc-----hhhHHHHHHHHHHHcCcc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQR-----YHGKVKAVIDSLREAGVK 112 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~~-----yhGrV~a~~~~lre~Gl~ 112 (114)
+..|+.+++.+.+.|..++.|- .+... ...|...|.+++++.|+.
T Consensus 124 ~~~g~~a~~~L~~~G~r~I~~i-~~~~~~~~~~~~~R~~Gf~~al~~~g~~ 173 (412)
T 4fe7_A 124 YALVESAFLHLKEKGVNRFAFY-GLPESSGKRWATEREYAFRQLVAEEKYR 173 (412)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEE-CCCTTSCCHHHHHHHHHHHHHHTTSSSC
T ss_pred HHHHHHHHHHHHHcCCceEEEe-cccccccccHHHHHHHHHHHHHHHcCCC
Confidence 4556677777788899998775 23322 456999999999999975
No 85
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A* 1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A* 3rsm_A 3bkq_X* 3c04_A* 2fkm_X*
Probab=54.23 E-value=37 Score=27.12 Aligned_cols=58 Identities=31% Similarity=0.465 Sum_probs=41.9
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEecCCCcchhhH--HHHHHHHHHHcCccc
Q 033657 54 RSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGK--VKAVIDSLREAGVKL 113 (114)
Q Consensus 54 k~~l~~~~n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGr--V~a~~~~lre~Gl~~ 113 (114)
++..+..-|-+.++.+|+-+|.-+++.|-..|++=. ..+++|. -.++++++..+|+++
T Consensus 20 RG~~~~~~t~~~~~~i~~a~~~~l~~~~~~~VvVG~--D~R~ss~~l~~a~~~gl~a~G~~V 79 (463)
T 1p5d_X 20 RGVVGDTLTAETAYWIGRAIGSESLARGEPCVAVGR--DGRLSGPELVKQLIQGLVDCGCQV 79 (463)
T ss_dssp EEEBTTTBCHHHHHHHHHHHHHHHHHTTCCEEEEEE--CSCTTHHHHHHHHHHHHHTBTCEE
T ss_pred ceeCCCCCCHHHHHHHHHHHHHHHHHcCCCeEEEEE--CCCCCHHHHHHHHHHHHHHCCCEE
Confidence 333444568899999999999998887656666542 3344554 567899999999875
No 86
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=53.73 E-value=17 Score=29.84 Aligned_cols=45 Identities=9% Similarity=0.038 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHc-CcccC
Q 033657 64 AAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREA-GVKLL 114 (114)
Q Consensus 64 ~Aa~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~-Gl~~~ 114 (114)
+.-..+++.|++.+.+.||+.|.--+ ++.+..|.+++.+. ||+++
T Consensus 8 ~~~~~~a~~lv~~L~~~GV~~vFg~P------G~~~~~l~dal~~~~~i~~i 53 (578)
T 3lq1_A 8 QVLTDYLAAFIEELVQAGVKEAIISP------GSRSTPLALMMAEHPILKIY 53 (578)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECC------CTTTHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECC------CCccHHHHHHHHhCCCceEE
Confidence 45678999999999999999984432 44567888888774 77653
No 87
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=52.96 E-value=26 Score=24.77 Aligned_cols=46 Identities=20% Similarity=0.124 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhh--CCCCEEEEecCCCc---chhhHHHHHHHHHHHc-Cccc
Q 033657 67 SKIGKILGERLLL--KDIPAVTVFLKREQ---RYHGKVKAVIDSLREA-GVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e--~gI~~v~~d~r~~~---~yhGrV~a~~~~lre~-Gl~~ 113 (114)
+..|+.+++.+.+ .|-.++.|- .+.. ....|...|.+++++. |+++
T Consensus 108 ~~~g~~~~~~l~~~~~g~~~i~~i-~~~~~~~~~~~R~~gf~~~l~~~~~~~~ 159 (291)
T 3l49_A 108 YSIGAELALQMVADLGGKGNVLVF-NGFYSVPVCKIRYDQMKYVLEAFPDVKI 159 (291)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEE-CSCTTSHHHHHHHHHHHHHHHTCTTEEE
T ss_pred HHHHHHHHHHHHHHcCCCceEEEE-eCCCCCchHHHHHHHHHHHHHHCCCCEE
Confidence 3445555566666 788888765 3322 2345899999999999 6763
No 88
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=52.87 E-value=13 Score=27.44 Aligned_cols=45 Identities=13% Similarity=0.293 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCC----cchhhHHHHHHHHHHHcCccc
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKRE----QRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~----~~yhGrV~a~~~~lre~Gl~~ 113 (114)
.-|+.+++.+.+.|..++.|-. +. .....|...|.+++++.|+.+
T Consensus 171 ~~~~~a~~~L~~~G~~~I~~i~-~~~~~~~~~~~R~~Gf~~al~~~g~~~ 219 (344)
T 3kjx_A 171 RAGREMAQAILKAGYRRIGFMG-TKMPLDYRARKRFEGFTEVLGKNGVEI 219 (344)
T ss_dssp HHHHHHHHHHHHHTCCSCCEEE-SSTTTCHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHCCCCeEEEEe-cCcccCccHHHHHHHHHHHHHHcCCCC
Confidence 3445555555566877765542 32 234569999999999999864
No 89
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=52.09 E-value=64 Score=23.26 Aligned_cols=57 Identities=14% Similarity=0.105 Sum_probs=38.6
Q ss_pred eEEEEEechhHhhhcccCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 41 TVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 41 ~~lasaST~e~~~k~~l~~~~n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
..|++.||.+|+. ++ ..++-+.+.||..- +..-+.++.-.++..+++.+++.|+++|
T Consensus 10 V~IimgS~SD~~v------------~~----~a~~~L~~~gi~~e-v~V~SaHR~p~~~~~~~~~a~~~g~~Vi 66 (174)
T 3lp6_A 10 VGVIMGSDSDWPV------------MA----DAAAALAEFDIPAE-VRVVSAHRTPEAMFSYARGAAARGLEVI 66 (174)
T ss_dssp EEEEESCGGGHHH------------HH----HHHHHHHHTTCCEE-EEECCTTTCHHHHHHHHHHHHHHTCCEE
T ss_pred EEEEECcHHhHHH------------HH----HHHHHHHHcCCCEE-EEEECCCCCHHHHHHHHHHHHhCCCCEE
Confidence 4455667666543 33 33455567898832 2223788889999999999999988753
No 90
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=51.55 E-value=17 Score=29.43 Aligned_cols=40 Identities=10% Similarity=-0.016 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHc-Cccc
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREA-GVKL 113 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~-Gl~~ 113 (114)
..++.|++.+.+.||+.+..-+ ++....|++++.+. +|++
T Consensus 6 ~~a~~l~~~L~~~GV~~vfg~P------G~~~~~l~~al~~~~~i~~ 46 (552)
T 1ovm_A 6 CVADYLLDRLTDCGADHLFGVP------GDYNLQFLDHVIDSPDICW 46 (552)
T ss_dssp BHHHHHHHHHHHTTCCEEEECC------CGGGHHHHHHHHHCSSCEE
T ss_pred CHHHHHHHHHHHcCCCEEEECC------ChhHHHHHHHHhcCCCceE
Confidence 3688999999999999985443 45577799998875 6765
No 91
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=51.38 E-value=19 Score=27.80 Aligned_cols=40 Identities=20% Similarity=0.193 Sum_probs=29.5
Q ss_pred HHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 72 ILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 72 ~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
.+.++|++.|++.+.+.|.+. ..| +..+.+.+++.||.+|
T Consensus 32 elv~~A~~~Gl~~iaiTDH~~--~~g-~~~~~~~~~~~gi~~i 71 (301)
T 3o0f_A 32 TLVEQARKLGLHGVAIADHDT--TAG-WDEATEASEEIGLPLL 71 (301)
T ss_dssp HHHHHHHHTTCSEEEECCBTC--CTT-HHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHcCCCEEEEcCCCc--ccc-HHHHHHHHHhcCCEEE
Confidence 478999999999999887432 234 4456667788898764
No 92
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A*
Probab=51.21 E-value=13 Score=31.99 Aligned_cols=40 Identities=20% Similarity=0.210 Sum_probs=31.1
Q ss_pred HHHHHhhCCCCEEEEecCCCc------------------chhhHHHHHHHHHHHcCccc
Q 033657 73 LGERLLLKDIPAVTVFLKREQ------------------RYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 73 la~R~~e~gI~~v~~d~r~~~------------------~yhGrV~a~~~~lre~Gl~~ 113 (114)
+|+.+++.|++-+++|+ +=+ ++-+-++++++.+.+.|++|
T Consensus 351 ~ad~~~~~G~~~~viDD-gW~~~r~~~~~~~Gdw~~d~~kFP~Glk~lvd~ih~~Glk~ 408 (720)
T 2yfo_A 351 LAKEAASLGIDMVVMDD-GWFGKRNDDNSSLGDWQVNETKLGGSLAELITRVHEQGMKF 408 (720)
T ss_dssp HHHHHHHHTCCEEEECS-SSBTTCSSTTSCTTCCSBCHHHHTSCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHcCCcEEEECc-ccccCCCcccccCCCCeeChhhcCccHHHHHHHHHHCCCEE
Confidence 67888999999999996 211 12222999999999999987
No 93
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=51.19 E-value=37 Score=24.54 Aligned_cols=57 Identities=11% Similarity=0.166 Sum_probs=38.8
Q ss_pred eEEEEEechhHhhhcccCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 41 TVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 41 ~~lasaST~e~~~k~~l~~~~n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
..|++.||.+|+. + +..++-+.+.||..- +..-+.++.-.++..+++.+++.|+++|
T Consensus 15 V~IimGS~SD~~v------------~----~~a~~~L~~~Gi~~e-v~V~SaHR~p~~~~~~~~~a~~~g~~Vi 71 (174)
T 3kuu_A 15 IAIVMGSKSDWAT------------M----QFAADVLTTLNVPFH-VEVVSAHRTPDRLFSFAEQAEANGLHVI 71 (174)
T ss_dssp EEEEESSGGGHHH------------H----HHHHHHHHHTTCCEE-EEECCTTTCHHHHHHHHHHTTTTTCSEE
T ss_pred EEEEECcHHHHHH------------H----HHHHHHHHHcCCCEE-EEEEcccCCHHHHHHHHHHHHhCCCcEE
Confidence 4455667766653 3 334555668898832 2223788899999999999999888753
No 94
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=50.80 E-value=34 Score=24.93 Aligned_cols=46 Identities=11% Similarity=0.182 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCcch-hhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQRY-HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~~y-hGrV~a~~~~lre~Gl~~ 113 (114)
...++.+++-+++.|.+++.+-. ..+.+ ..+.+.|.+++.+.|+++
T Consensus 124 ~~~~~~~~~~l~~~g~~~ia~i~-~~~~~g~~~~~~~~~~l~~~g~~v 170 (368)
T 4eyg_A 124 AQSSIIIGDWAAKNGIKKVATLT-SDYAPGNDALAFFKERFTAGGGEI 170 (368)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEE-ESSHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEEe-cCchHhHHHHHHHHHHHHHcCCEE
Confidence 34566677777788999876542 23333 456899999999999875
No 95
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=50.75 E-value=48 Score=23.64 Aligned_cols=57 Identities=14% Similarity=0.120 Sum_probs=38.4
Q ss_pred eEEEEEechhHhhhcccCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 41 TVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 41 ~~lasaST~e~~~k~~l~~~~n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
..|++.||.+|+. ++ ..++-+.+.||..- +..-+.++.-.++..+++.+++.|+++|
T Consensus 6 V~Iimgs~SD~~v------------~~----~a~~~l~~~gi~~e-v~V~SaHR~p~~~~~~~~~a~~~g~~Vi 62 (163)
T 3ors_A 6 VAVIMGSSSDWKI------------MQ----ESCNMLDYFEIPYE-KQVVSAHRTPKMMVQFASEARERGINII 62 (163)
T ss_dssp EEEEESCGGGHHH------------HH----HHHHHHHHTTCCEE-EEECCTTTSHHHHHHHHHHTTTTTCCEE
T ss_pred EEEEECcHHHHHH------------HH----HHHHHHHHcCCCEE-EEEECCcCCHHHHHHHHHHHHhCCCcEE
Confidence 4455667766653 33 33455577898832 2223688889999999999999888753
No 96
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=50.51 E-value=25 Score=22.87 Aligned_cols=23 Identities=43% Similarity=0.810 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHhhCCCCEEEEec
Q 033657 67 SKIGKILGERLLLKDIPAVTVFL 89 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~ 89 (114)
-.+|..+|+.+.+.|..-+.+|.
T Consensus 16 G~~G~~la~~L~~~g~~v~vid~ 38 (140)
T 3fwz_A 16 GRVGSLLGEKLLASDIPLVVIET 38 (140)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEES
T ss_pred CHHHHHHHHHHHHCCCCEEEEEC
Confidence 46899999999999999888884
No 97
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron}
Probab=50.23 E-value=15 Score=29.05 Aligned_cols=39 Identities=13% Similarity=0.135 Sum_probs=27.7
Q ss_pred HHHHhhCCCCEEEEecCCCc----ch------------hh--HHHHHHHHHHHcCccc
Q 033657 74 GERLLLKDIPAVTVFLKREQ----RY------------HG--KVKAVIDSLREAGVKL 113 (114)
Q Consensus 74 a~R~~e~gI~~v~~d~r~~~----~y------------hG--rV~a~~~~lre~Gl~~ 113 (114)
-+.++++||+.|++- +.++ .| .+ -|..+++++++.||+|
T Consensus 60 ~~~mK~~GikyvIl~-~~~~~gf~~~pS~~~~~~~~~~p~~Dlv~~~l~aa~k~Gmkv 116 (340)
T 4h41_A 60 FQHMKRIGIDTVIMI-RSGYRKFMTYPSPYLLKKGCYMPSVDLVDMYLRLAEKYNMKF 116 (340)
T ss_dssp HHHHHHTTCCEEEES-CSEETTEESSCCHHHHHTTCCCCSBCHHHHHHHHHHHTTCEE
T ss_pred HHHHHHcCCCEEEEE-EEeeCCeeccCcccccccCccCCcccHHHHHHHHHHHhCCeE
Confidence 345688999999874 2211 11 11 3999999999999986
No 98
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=49.87 E-value=28 Score=25.64 Aligned_cols=45 Identities=11% Similarity=0.042 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCC---cchhhHHHHHHHHHHHcCcc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKRE---QRYHGKVKAVIDSLREAGVK 112 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~---~~yhGrV~a~~~~lre~Gl~ 112 (114)
+.-|+.+++.+.+.|..++.|-. +. .....|...|.+++++.|+.
T Consensus 159 ~~~~~~a~~~L~~~G~~~I~~i~-~~~~~~~~~~R~~Gf~~al~~~g~~ 206 (333)
T 3jvd_A 159 EAGFFQLTESVLGGSGMNIAALV-GEESLSTTQERMRGISHAASIYGAE 206 (333)
T ss_dssp HHHHHHHHHHHCCSSSCEEEEEE-SCTTSHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHCCCCeEEEEe-CCCCCccHHHHHHHHHHHHHHCCCC
Confidence 44567777778888999987653 33 23467999999999999975
No 99
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=49.83 E-value=12 Score=30.55 Aligned_cols=41 Identities=7% Similarity=0.199 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
.+++.|++.+.+.||+.+..-+ ++....|++++.+.||+++
T Consensus 5 ~~a~~l~~~L~~~GV~~vfg~P------G~~~~~l~~al~~~~i~~i 45 (563)
T 2uz1_A 5 TGGELVVRTLIKAGVEHLFGLH------GAHIDTIFQACLDHDVPII 45 (563)
T ss_dssp EHHHHHHHHHHHHTCCCEEECC------CGGGHHHHHHHHHHTCCEE
T ss_pred CHHHHHHHHHHHCCCCEEEECC------CCchHHHHHHHHhcCCcEE
Confidence 3678999999999999984432 4557788888887777653
No 100
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=49.38 E-value=29 Score=24.72 Aligned_cols=46 Identities=9% Similarity=-0.005 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHhhC--CCCEEEEecCCC--cchhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLK--DIPAVTVFLKRE--QRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~--gI~~v~~d~r~~--~~yhGrV~a~~~~lre~Gl~~ 113 (114)
+..|+.+++.+.+. |-.++.|-. +. .....|...|.+++++.|+.+
T Consensus 110 ~~~g~~~~~~l~~~~~g~~~i~~i~-~~~~~~~~~R~~gf~~~l~~~~~~~ 159 (305)
T 3g1w_A 110 YNAGMNAAYKMAELLDGEGEVAVIT-LPNQLNHQERTTGFKETLEAEFPAI 159 (305)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHHCTTE
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEe-CCCcccHHHHHHHHHHHHHhhCCCC
Confidence 34455555666665 878876652 32 233568999999999998753
No 101
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=49.19 E-value=21 Score=29.23 Aligned_cols=41 Identities=17% Similarity=0.236 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHc--CcccC
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREA--GVKLL 114 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~--Gl~~~ 114 (114)
.++..|++.+.+.||+.+..-+ ++.+..|++++.+. ||+++
T Consensus 5 ~~a~~l~~~L~~~GV~~vfg~P------G~~~~~l~~al~~~~~~i~~v 47 (589)
T 2pgn_A 5 RGADLIVEALEEYGTEQVVGFI------GHTSHFVADAFSKSHLGKRVI 47 (589)
T ss_dssp EHHHHHHHHHHHTTCCEEEEEC------SGGGHHHHHHHHTSTTSTTCB
T ss_pred cHHHHHHHHHHHcCCCEEEEec------CCchHHHHHHHHhcCCCCeEE
Confidence 3688999999999999985543 45577899998774 67754
No 102
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=48.69 E-value=16 Score=29.47 Aligned_cols=43 Identities=14% Similarity=0.153 Sum_probs=32.0
Q ss_pred HHHHHHHhhCCCCEEEEecCCCcchhh-----HHHHHHHHHHHcCcccC
Q 033657 71 KILGERLLLKDIPAVTVFLKREQRYHG-----KVKAVIDSLREAGVKLL 114 (114)
Q Consensus 71 ~~la~R~~e~gI~~v~~d~r~~~~yhG-----rV~a~~~~lre~Gl~~~ 114 (114)
.-+.+.|.++|++.+++. ..|+...| .-..+.+.+++.|+.++
T Consensus 78 ~~~v~e~~~~Gi~~vv~~-s~G~~e~g~~g~~~~~~l~~~a~~~g~~vi 125 (457)
T 2csu_A 78 KDTLIQCGEKGVKGVVII-TAGFGETGEEGKREEKELVEIAHKYGMRII 125 (457)
T ss_dssp HHHHHHHHHHTCCEEEEC-CCSSTTSCHHHHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHcCCCEEEEe-cCCCCccccccHHHHHHHHHHHHHcCCEEE
Confidence 445678888999998876 46665433 26788899999999764
No 103
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=47.93 E-value=24 Score=26.68 Aligned_cols=42 Identities=17% Similarity=0.196 Sum_probs=30.7
Q ss_pred HHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 71 KILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 71 ~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
.-+++.|.++|+..+++. ..|+.-++ ...+.+.+++.|+.++
T Consensus 84 ~~~v~ea~~~Gi~~vVi~-t~G~~~~~-~~~l~~~A~~~gi~vi 125 (294)
T 2yv1_A 84 KDAVFEAIDAGIELIVVI-TEHIPVHD-TMEFVNYAEDVGVKII 125 (294)
T ss_dssp HHHHHHHHHTTCSEEEEC-CSCCCHHH-HHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHCCCCEEEEE-CCCCCHHH-HHHHHHHHHHcCCEEE
Confidence 455778899999977665 35665433 6788889999998653
No 104
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=47.50 E-value=21 Score=29.42 Aligned_cols=41 Identities=12% Similarity=0.193 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHc--CcccC
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREA--GVKLL 114 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~--Gl~~~ 114 (114)
.++..|++++.+.||+.+.--+ ++.+..|.+++.+. ||+++
T Consensus 12 ~~a~~l~~~L~~~GV~~vfg~P------G~~~~~l~dal~~~~~~i~~i 54 (603)
T 4feg_A 12 LAGAAVIKVLEAWGVDHLYGIP------GGSINSIMDALSAERDRIHYI 54 (603)
T ss_dssp EHHHHHHHHHHHTTCCEEEECC------CGGGHHHHHHHHHTTTTSEEE
T ss_pred eHHHHHHHHHHHCCCCEEEEeC------CCchHHHHHHHHhccCCCeEE
Confidence 4788999999999999984332 46678899999874 77753
No 105
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=47.26 E-value=17 Score=29.52 Aligned_cols=41 Identities=24% Similarity=0.291 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHc-CcccC
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREA-GVKLL 114 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~-Gl~~~ 114 (114)
.+++.|++.+.+.||+.+..-+ ++.+..|++++.+. ||+++
T Consensus 5 ~~a~~l~~~L~~~GV~~vfg~P------G~~~~~l~~al~~~~~i~~v 46 (563)
T 2vk8_A 5 TLGKYLFERLKQVNVNTVFGLP------GDFNLSLLDKIYEVEGMRWA 46 (563)
T ss_dssp EHHHHHHHHHHHTTCCEEEECC------CGGGHHHHHGGGGSTTCEEC
T ss_pred CHHHHHHHHHHHcCCCEEEEcC------CcchHHHHHHHhhcCCceEE
Confidence 3688999999999999984432 45577789988765 67764
No 106
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=47.06 E-value=21 Score=29.00 Aligned_cols=41 Identities=17% Similarity=0.124 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHc-Cccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREA-GVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~-Gl~~ 113 (114)
...++.|++.+.+.||+.+..-+ ++....|++++.+. +|++
T Consensus 25 ~~~a~~l~~~L~~~GV~~vfg~P------G~~~~~l~~al~~~~~i~~ 66 (570)
T 2vbf_A 25 YTVGDYLLDRLHELGIEEIFGVP------GDYNLQFLDQIISREDMKW 66 (570)
T ss_dssp CBHHHHHHHHHHHTTCCEEEECC------CGGGHHHHHHHHHCSSCEE
T ss_pred CCHHHHHHHHHHHcCCCEEEECC------CcchHHHHHHHhcCCCCeE
Confidence 35789999999999999985443 45677889998775 6765
No 107
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=46.27 E-value=21 Score=24.83 Aligned_cols=51 Identities=16% Similarity=0.248 Sum_probs=33.1
Q ss_pred CHHHHHHHHHHHHHHHhhCCCCEEEEecCCC---cchhhHHHHHHHHHHHc-Cccc
Q 033657 62 DVAAASKIGKILGERLLLKDIPAVTVFLKRE---QRYHGKVKAVIDSLREA-GVKL 113 (114)
Q Consensus 62 n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~---~~yhGrV~a~~~~lre~-Gl~~ 113 (114)
|..+++..++.|.+++.+.|..++.|- .+. .....|...|.+++.+. |+++
T Consensus 107 ~~~~g~~~~~~l~~~~~~~G~~~i~~i-~~~~~~~~~~~R~~gf~~~l~~~~~~~~ 161 (276)
T 3ksm_A 107 NYAAGQLAARALLATLDLSKERNIALL-RLRAGNASTDQREQGFLDVLRKHDKIRI 161 (276)
T ss_dssp HHHHHHHHHHHHHHHSCTTSCEEEEEC-BCCTTCHHHHHHHHHHHHHHTTCTTEEE
T ss_pred HHHHHHHHHHHHHHhcCcCCCceEEEE-EcCCCchhHHHHHHHHHHHHHhCCCcEE
Confidence 445555555555554433388888765 332 23456999999999998 8764
No 108
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=46.15 E-value=27 Score=24.73 Aligned_cols=44 Identities=18% Similarity=0.120 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCC---cchhhHHHHHHHHHHHcCccc
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKRE---QRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~---~~yhGrV~a~~~~lre~Gl~~ 113 (114)
.-|+.+++.+. .|-.++.|-. +. .....|...|.+++++.|+.+
T Consensus 109 ~~g~~a~~~L~-~G~~~I~~i~-~~~~~~~~~~R~~Gf~~~l~~~g~~~ 155 (277)
T 3hs3_A 109 KGGKESIKLLS-KKIEKVLIQH-WPLSLPTIRERIEAMTAEASKLKIDY 155 (277)
T ss_dssp HHHHHHHHTSC-TTCCEEEEEE-SCTTSHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHH-hCCCEEEEEe-CCCcCccHHHHHHHHHHHHHHCCCCC
Confidence 34556666666 8999987752 32 234569999999999999864
No 109
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=45.90 E-value=35 Score=24.90 Aligned_cols=44 Identities=14% Similarity=0.142 Sum_probs=30.2
Q ss_pred HHHHHHHHHhh--CCCCEEEEecCCC---cchhhHHHHHHHHHHHc-Cccc
Q 033657 69 IGKILGERLLL--KDIPAVTVFLKRE---QRYHGKVKAVIDSLREA-GVKL 113 (114)
Q Consensus 69 vG~~la~R~~e--~gI~~v~~d~r~~---~~yhGrV~a~~~~lre~-Gl~~ 113 (114)
.|+.+++.+.+ .|-.++.|- .+. .....|...|.+++.+. |+++
T Consensus 121 ~g~~a~~~L~~~~~G~~~I~~i-~g~~~~~~~~~R~~Gf~~al~~~pgi~~ 170 (332)
T 2rjo_A 121 YGEETATQLFKSMGGKGGVVAL-GGIFSNVPAIERKAGLDAALKKFPGIQL 170 (332)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEE-ECCTTCHHHHHHHHHHHHHHHTCTTEEE
T ss_pred HHHHHHHHHHHHcCCCCeEEEE-ECCCCCccHHHHHHHHHHHHHhCCCcEE
Confidence 45555555555 688888665 232 12467999999999999 9864
No 110
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*
Probab=45.86 E-value=40 Score=27.16 Aligned_cols=52 Identities=10% Similarity=0.077 Sum_probs=38.6
Q ss_pred CCHHHHHHHHHHHHHH-HhhCCCCEEEEecCCC---------------cchhhHHHHHHHHHHHcCccc
Q 033657 61 RDVAAASKIGKILGER-LLLKDIPAVTVFLKRE---------------QRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 61 ~n~~Aa~~vG~~la~R-~~e~gI~~v~~d~r~~---------------~~yhGrV~a~~~~lre~Gl~~ 113 (114)
-|-+........+++. +++.|++-+++|+ |= .++-+-++++++.+++.|++|
T Consensus 33 i~e~~i~~~ad~~~~~Gl~~~G~~~~~iDD-gW~~~~rd~~G~~~~~~~kFP~Gl~~l~~~ih~~Glk~ 100 (404)
T 3hg3_A 33 ISEKLFMEMAELMVSEGWKDAGYEYLCIDD-CWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKL 100 (404)
T ss_dssp SSHHHHHHHHHHHHHTTHHHHTCCEEECCS-SCBCSSCCTTSCCCBCTTTSTTHHHHHHHHHHHTTCEE
T ss_pred cCHHHHHHHHHHHHHCCcHhhCCeEEEECC-CcCCCCCCCCCCeeeChhhcCCCHHHHHHHHHHCCCee
Confidence 3566667777777653 6688999999996 31 133334999999999999987
No 111
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=45.57 E-value=49 Score=21.04 Aligned_cols=22 Identities=18% Similarity=-0.020 Sum_probs=19.3
Q ss_pred HHHHHHHHHHhhCCCCEEEEec
Q 033657 68 KIGKILGERLLLKDIPAVTVFL 89 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~ 89 (114)
.+|..+|+.+.+.|.+-+.+|.
T Consensus 16 ~iG~~la~~L~~~g~~V~~id~ 37 (141)
T 3llv_A 16 AAGVGLVRELTAAGKKVLAVDK 37 (141)
T ss_dssp HHHHHHHHHHHHTTCCEEEEES
T ss_pred HHHHHHHHHHHHCCCeEEEEEC
Confidence 5899999999999998888883
No 112
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=45.54 E-value=46 Score=24.51 Aligned_cols=45 Identities=13% Similarity=0.161 Sum_probs=32.3
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCCcch-hhHHHHHHHHHHHcCccc
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKREQRY-HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~~~y-hGrV~a~~~~lre~Gl~~ 113 (114)
..++.+++-+.+.|.+++.+-. ..+.| .++.+.|.+.+.+.|+++
T Consensus 126 ~~~~~~~~~l~~~g~~~vaii~-~~~~~g~~~~~~~~~~~~~~G~~v 171 (375)
T 3i09_A 126 ALAKGTGSAVVKQGGKTWFFLT-ADYAFGKALEKNTADVVKANGGKV 171 (375)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEE-ESSHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHcCCceEEEEe-cccHHHHHHHHHHHHHHHHcCCEE
Confidence 3456667777778999886642 33333 458899999999999875
No 113
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=45.36 E-value=17 Score=29.91 Aligned_cols=44 Identities=7% Similarity=0.008 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHc-CcccC
Q 033657 65 AASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREA-GVKLL 114 (114)
Q Consensus 65 Aa~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~-Gl~~~ 114 (114)
.-...++.|++.+.+.||+.|..-+ ++.+..|++++.+. +|+++
T Consensus 29 ~~~~~a~~lv~~L~~~GV~~vFg~P------G~~~~~l~dal~~~~~i~~i 73 (604)
T 2x7j_A 29 PITHYIGSFIDEFALSGITDAVVCP------GSRSTPLAVLCAAHPDISVH 73 (604)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEECC------CSTTHHHHHHHHHCTTCEEE
T ss_pred hhHHHHHHHHHHHHHcCCCEEEECc------CcccHHHHHHHHhCCCceEE
Confidence 3457899999999999999985443 34577788888764 67653
No 114
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=45.13 E-value=26 Score=26.91 Aligned_cols=41 Identities=12% Similarity=0.043 Sum_probs=30.3
Q ss_pred HHHHhhCCCCEEEEe----cCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 74 GERLLLKDIPAVTVF----LKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 74 a~R~~e~gI~~v~~d----~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
-+.+++.|+..|.+. +.+++-.-..+..+++.+++.||+++
T Consensus 33 ~~ilk~~G~N~VRi~~w~~P~~g~~~~~~~~~~~~~A~~~GlkV~ 77 (332)
T 1hjs_A 33 ENILAANGVNTVRQRVWVNPADGNYNLDYNIAIAKRAKAAGLGVY 77 (332)
T ss_dssp HHHHHHTTCCEEEEEECSSCTTCTTSHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHCCCCEEEEeeeeCCCCCcCCHHHHHHHHHHHHHCCCEEE
Confidence 455678999988763 12344456688899999999999874
No 115
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=45.10 E-value=18 Score=29.41 Aligned_cols=39 Identities=18% Similarity=0.200 Sum_probs=30.2
Q ss_pred HHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHc-Cccc
Q 033657 69 IGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREA-GVKL 113 (114)
Q Consensus 69 vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~-Gl~~ 113 (114)
+++.|++.+.+.||+.+..-+ ++....|++++.+. ||++
T Consensus 5 ~a~~l~~~L~~~GV~~vfg~P------G~~~~~l~~al~~~~~i~~ 44 (568)
T 2wvg_A 5 VGTYLAERLVQIGLKHHFAVA------GDYNLVLLDNLLLNKNMEQ 44 (568)
T ss_dssp HHHHHHHHHHHTTCSEEEECC------CTTTHHHHHHHHTCTTSEE
T ss_pred HHHHHHHHHHHcCCCEEEeCC------CCccHHHHHHHhccCCceE
Confidence 678999999999999985443 34577788888765 6765
No 116
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=45.02 E-value=38 Score=24.83 Aligned_cols=44 Identities=11% Similarity=0.171 Sum_probs=31.7
Q ss_pred HHHHHHHHHhhCCCCEEEEecCCCcch-hhHHHHHHHHHHHcCccc
Q 033657 69 IGKILGERLLLKDIPAVTVFLKREQRY-HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 69 vG~~la~R~~e~gI~~v~~d~r~~~~y-hGrV~a~~~~lre~Gl~~ 113 (114)
.+..+++-+.+.|.+++.+-. ....| ..+.+.|.+++.+.|+++
T Consensus 128 ~~~~~~~~l~~~g~~~iaii~-~~~~~g~~~~~~~~~~~~~~G~~v 172 (364)
T 3lop_A 128 EIDKMITALVTIGVTRIGVLY-QEDALGKEAITGVERTLKAHALAI 172 (364)
T ss_dssp HHHHHHHHHHHTTCCCEEEEE-ETTHHHHHHHHHHHHHHHTTTCCC
T ss_pred HHHHHHHHHHHcCCceEEEEE-eCchhhHHHHHHHHHHHHHcCCcE
Confidence 456677777788999876542 23333 457899999999999875
No 117
>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A*
Probab=44.79 E-value=29 Score=28.27 Aligned_cols=43 Identities=16% Similarity=0.192 Sum_probs=32.1
Q ss_pred HHHHHHHhhCCCCEEEEecCC--Cc--------ch--------hhHHHHHHHHHHHcCccc
Q 033657 71 KILGERLLLKDIPAVTVFLKR--EQ--------RY--------HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 71 ~~la~R~~e~gI~~v~~d~r~--~~--------~y--------hGrV~a~~~~lre~Gl~~ 113 (114)
+..|+.++++|.+-+++.-+- |+ .+ .--|+.+++++|+.||+|
T Consensus 108 ~~Wa~~~k~AGakyvvlTaKHHDGF~lwpSk~t~~ns~~~~pkrDlv~El~~A~rk~Glk~ 168 (455)
T 2zxd_A 108 QEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYTDFNSVKRGPKRDLVGDLAKAVREAGLRF 168 (455)
T ss_dssp HHHHHHHHHTTCSEEEEEEECTTCCBSSCCSSCSCBTTTSTTCSCHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHhCCCEEEEEeeccCCccccCCCCCCCcccccCCCCChHHHHHHHHHHcCCeE
Confidence 567899999999999885310 10 11 236999999999999987
No 118
>1pea_A Amidase operon; gene regulator, receptor, binding protein; 2.10A {Pseudomonas aeruginosa} SCOP: c.93.1.1 PDB: 1qo0_A 1qnl_A
Probab=44.55 E-value=37 Score=25.23 Aligned_cols=44 Identities=14% Similarity=0.056 Sum_probs=32.1
Q ss_pred HHHHHHHHHhhCCCCEEEEecCCCcch-hhHHHHHHHHHHHcCccc
Q 033657 69 IGKILGERLLLKDIPAVTVFLKREQRY-HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 69 vG~~la~R~~e~gI~~v~~d~r~~~~y-hGrV~a~~~~lre~Gl~~ 113 (114)
.++.+++.+.+.|.+++.+-. +.+.| .++.+.|.+++.+.|+++
T Consensus 127 ~~~~~~~~l~~~g~~~ia~i~-~~~~~~~~~~~~~~~~l~~~G~~v 171 (385)
T 1pea_A 127 NSAPLAAYLIRHYGERVVFIG-SDYIYPRESNHVMRHLYRQHGGTV 171 (385)
T ss_dssp THHHHHHHHHTTTCSEEEEEE-ESSHHHHHHHHHHHHHHHHTTCEE
T ss_pred hHHHHHHHHHHccCcEEEEEe-CCChHHHHHHHHHHHHHHHcCCEE
Confidence 466777788888888876542 23333 568899999999999864
No 119
>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A*
Probab=44.35 E-value=22 Score=28.75 Aligned_cols=43 Identities=12% Similarity=0.207 Sum_probs=31.8
Q ss_pred HHHHHHHhhCCCCEEEEecC---------CCc-ch--------hhHHHHHHHHHHHcCccc
Q 033657 71 KILGERLLLKDIPAVTVFLK---------REQ-RY--------HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 71 ~~la~R~~e~gI~~v~~d~r---------~~~-~y--------hGrV~a~~~~lre~Gl~~ 113 (114)
...|+.++++|.+-+++.-+ +.+ .| .--|+.|++++|+.||+|
T Consensus 81 ~~Wa~~~k~AGakyvvlTaKHHDGF~lwpSk~t~~n~~~~~~krDlv~el~~A~rk~Glk~ 141 (450)
T 2wvv_A 81 KKWAKMAKEMGTKYVKITTKHHEGFCLWPSKYTKYTVANTPYKRDILGELVKAYNDEGIDV 141 (450)
T ss_dssp HHHHHHHHHHTCSEEEEEEECTTCCBSSCCTTCSCBGGGSTTCSCHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHcCCcEEEEEEeecCCccccCCCCCCCccccCCCCCChHHHHHHHHHHcCCeE
Confidence 45788899999999988531 001 01 236999999999999987
No 120
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=44.34 E-value=32 Score=24.79 Aligned_cols=49 Identities=14% Similarity=0.233 Sum_probs=31.2
Q ss_pred CHHHHHHHHHHHHHHHhhCCCCEEEEecCCC---cchhhHHHHHHHHHHHcCccc
Q 033657 62 DVAAASKIGKILGERLLLKDIPAVTVFLKRE---QRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 62 n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~---~~yhGrV~a~~~~lre~Gl~~ 113 (114)
|..+++..++.|.+++ .|-.++.|- .+. .....|...|.+++++.|+++
T Consensus 105 ~~~~g~~a~~~L~~~~--~G~~~I~~i-~~~~~~~~~~~R~~gf~~~l~~~g~~~ 156 (313)
T 2h3h_A 105 NYQAGYTAGLIMKELL--GGKGKVVIG-TGSLTAMNSLQRIQGFKDAIKDSEIEI 156 (313)
T ss_dssp HHHHHHHHHHHHHHHH--TSCSEEEEE-ESCSSCHHHHHHHHHHHHHHTTSSCEE
T ss_pred HHHHHHHHHHHHHHHc--CCCCEEEEE-ECCCCCccHHHHHHHHHHHhcCCCCEE
Confidence 3445555555554443 277887665 232 223568999999999999864
No 121
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=44.18 E-value=15 Score=27.80 Aligned_cols=40 Identities=13% Similarity=0.112 Sum_probs=29.5
Q ss_pred HHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 71 KILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 71 ~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
+.++++|.++|++-+.+-| ..+. -...+.+.+++.||++|
T Consensus 106 e~F~~~~~~aGvdG~IipD---LP~e-E~~~~~~~~~~~Gl~~I 145 (252)
T 3tha_A 106 EKFVKKAKSLGICALIVPE---LSFE-ESDDLIKECERYNIALI 145 (252)
T ss_dssp HHHHHHHHHTTEEEEECTT---CCGG-GCHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHcCCCEEEeCC---CCHH-HHHHHHHHHHHcCCeEE
Confidence 4589999999999986542 2222 26778888999998764
No 122
>1jye_A Lactose operon repressor; gene regulation, protein stability, protein DNA-binding, transcription; 1.70A {Escherichia coli} SCOP: c.93.1.1 PDB: 1lbi_A 1lbg_A* 1lbh_A 1jyf_A 3edc_A 1efa_A* 1jwl_A* 2pe5_A* 1tlf_A* 2p9h_A* 2paf_A* 1cjg_A* 1l1m_A 1osl_A 2kei_A* 2kej_A* 2kek_A* 2bjc_A 1lqc_A 1lcc_A* ...
Probab=43.85 E-value=40 Score=24.95 Aligned_cols=45 Identities=7% Similarity=-0.010 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCCc---chhhHHHHHHHHHHHcCccc
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKREQ---RYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~~---~yhGrV~a~~~~lre~Gl~~ 113 (114)
.-|+..++.+.+.|..++.|- .+.. ....|...|.+++++.|+.+
T Consensus 165 ~~~~~a~~~L~~~G~~~I~~i-~g~~~~~~~~~R~~Gf~~al~~~gi~~ 212 (349)
T 1jye_A 165 DGTRLGVEHLVALGHQQIALL-AGPLSSVSARLRLAGWHKYLTRNQIQP 212 (349)
T ss_dssp HHHHHHHHHHHHHTCCSEEEE-ECCTTSHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHCCCCEEEEE-eCCCCCccHHHHHHHHHHHHHHcCCCc
Confidence 345555666666788888665 2332 23568999999999999853
No 123
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13
Probab=43.65 E-value=21 Score=29.75 Aligned_cols=42 Identities=7% Similarity=-0.092 Sum_probs=32.3
Q ss_pred HHHHHHHhhCCCCEEEEecC----------CCcchhhHHHHHHHHHHHcCccc
Q 033657 71 KILGERLLLKDIPAVTVFLK----------REQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 71 ~~la~R~~e~gI~~v~~d~r----------~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
..+|+.+.+.|++-+++|+- ...++-+ ++++++.+.+.|++|
T Consensus 215 ~~~ad~~~~~G~~~~~IDdgW~~~~Gdw~~d~~kFP~-lk~lvd~lh~~Glk~ 266 (564)
T 1zy9_A 215 LKNLKLAKNFPFEVFQIDDAYEKDIGDWLVTRGDFPS-VEEMAKVIAENGFIP 266 (564)
T ss_dssp HHHHHHGGGTTCSEEEECTTSEEETTEEEEECTTCCC-HHHHHHHHHHTTCEE
T ss_pred HHHHHHHHhcCCcEEEECcccccccCCcccCcccCCC-HHHHHHHHHHCCCEE
Confidence 34567777999999999861 1224556 999999999999986
No 124
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=43.34 E-value=47 Score=22.99 Aligned_cols=39 Identities=21% Similarity=0.158 Sum_probs=28.7
Q ss_pred HHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCccc
Q 033657 72 ILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 72 ~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
.+++.|.++|.+.+.+... . ....+..+.+.+++.|+++
T Consensus 68 ~~~~~~~~~Gad~v~v~~~-~--~~~~~~~~~~~~~~~g~~~ 106 (211)
T 3f4w_A 68 FESQLLFDAGADYVTVLGV-T--DVLTIQSCIRAAKEAGKQV 106 (211)
T ss_dssp HHHHHHHHTTCSEEEEETT-S--CHHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHhcCCCEEEEeCC-C--ChhHHHHHHHHHHHcCCeE
Confidence 4588999999999887642 1 2345788888888888764
No 125
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=42.91 E-value=33 Score=25.96 Aligned_cols=42 Identities=14% Similarity=0.128 Sum_probs=30.2
Q ss_pred HHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 71 KILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 71 ~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
.-+++.|.++|+..+++. ..|+.-+ -...+.+.+++.|+.++
T Consensus 85 ~~~v~ea~~~Gi~~vVi~-t~G~~~~-~~~~l~~~A~~~gi~vi 126 (297)
T 2yv2_A 85 PDAVYEAVDAGIRLVVVI-TEGIPVH-DTMRFVNYARQKGATII 126 (297)
T ss_dssp HHHHHHHHHTTCSEEEEC-CCCCCHH-HHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHCCCCEEEEE-CCCCCHH-HHHHHHHHHHHcCCEEE
Confidence 345778889999977765 3566533 36778888899998653
No 126
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=42.74 E-value=15 Score=29.94 Aligned_cols=40 Identities=18% Similarity=0.266 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCccc
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
.+++.|++.+.+.||+.+..-+ ++.+..|++++.+.||++
T Consensus 12 ~~a~~l~~~L~~~GV~~vfg~P------G~~~~~l~~al~~~~i~~ 51 (566)
T 1ozh_A 12 HGADLVVSQLEAQGVRQVFGIP------GAKIDKVFDSLLDSSIRI 51 (566)
T ss_dssp CHHHHHHHHHHHHTCCEEEEEC------CTTTHHHHHHGGGSSSEE
T ss_pred cHHHHHHHHHHHCCCCEEEEcC------CCchHHHHHHHHhCCCcE
Confidence 4688999999999999985543 345677888887667765
No 127
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=42.63 E-value=29 Score=29.77 Aligned_cols=41 Identities=10% Similarity=0.095 Sum_probs=31.5
Q ss_pred HHHHHHhhCCCCEEEEecCCCc------------------chhhHHHHHHHHHHHcCccc
Q 033657 72 ILGERLLLKDIPAVTVFLKREQ------------------RYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 72 ~la~R~~e~gI~~v~~d~r~~~------------------~yhGrV~a~~~~lre~Gl~~ 113 (114)
-+|+.+++.|++-+++|+ |=+ ++-+-++++++.+.+.|++|
T Consensus 354 ~~ad~~~~~G~~~~viDD-GW~~~r~~~~~~~Gd~~~d~~kFP~Glk~lv~~ih~~Glk~ 412 (732)
T 2xn2_A 354 TIVDKAKKLGLEMFVLDD-GWFGHRDDDNSSLGDWKVYKKKFPNGLGHFADYVHEQGLKF 412 (732)
T ss_dssp HHHHHHHHTTCCEEEECS-SSBTTCSSTTSCTTCCSBCTTTCTTCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHcCCcEEEEcC-cccccCCCCccccCceeeCchhcCccHHHHHHHHHHcCCEE
Confidence 367788899999999986 211 12223999999999999987
No 128
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=42.44 E-value=24 Score=30.21 Aligned_cols=54 Identities=15% Similarity=0.267 Sum_probs=38.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhCCCCEE---EE----ecCCCcc---hh-------hHHHHHHHHHHHcCc
Q 033657 58 GCTRDVAAASKIGKILGERLLLKDIPAV---TV----FLKREQR---YH-------GKVKAVIDSLREAGV 111 (114)
Q Consensus 58 ~~~~n~~Aa~~vG~~la~R~~e~gI~~v---~~----d~r~~~~---yh-------GrV~a~~~~lre~Gl 111 (114)
..+.|.+.++.+|+.+|+.+.+.||+-. ++ |++++-. |+ --..|+.+++++.|+
T Consensus 88 aat~d~~l~~~~g~~~a~E~~a~Gi~~~~aP~vdi~r~p~~gR~~e~fgeDP~l~~~~a~a~v~G~q~~gV 158 (721)
T 2x41_A 88 ASTWNRELLEEVGKAMGEEVREYGVDVLLAPAMNIHRNPLCGRNFEYYSEDPVLSGEMASSFVKGVQSQGV 158 (721)
T ss_dssp HHTCCHHHHHHHHHHHHHHHHHTTCSEECCCBCCCCCSTTCTTGGGSCCSSHHHHHHHHHHHHHHHHTTTC
T ss_pred hhcCCHHHHHHHHHHHHHHHHHhCCCEEeeceECCCCCCCCCcccccCCCCHHHHHHHHHHHHHHhhhCCe
Confidence 3467999999999999999999999853 11 2233311 11 136789999999886
No 129
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=42.34 E-value=61 Score=22.54 Aligned_cols=40 Identities=18% Similarity=0.253 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcc
Q 033657 63 VAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVK 112 (114)
Q Consensus 63 ~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~ 112 (114)
.++|+.+|+.||++ |+.=| . |+.. |-..|..+++.++|-.
T Consensus 19 ~~~A~~lg~~La~~----g~~lV--~--Ggg~--GiM~aa~~gAl~~gG~ 58 (171)
T 1weh_A 19 YARWVRYGEVLAEE----GFGLA--C--GGYQ--GGMEALARGVKAKGGL 58 (171)
T ss_dssp HHHHHHHHHHHHHT----TEEEE--E--CCSS--THHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHC----CCEEE--e--CChh--hHHHHHHHHHHHcCCc
Confidence 35677777777774 54433 3 5543 9999999999998743
No 130
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=41.95 E-value=43 Score=24.34 Aligned_cols=45 Identities=22% Similarity=0.287 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhhC-CCCEEEEecCCCcch-hhHHHHHHHHHHHcCccc
Q 033657 68 KIGKILGERLLLK-DIPAVTVFLKREQRY-HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 68 ~vG~~la~R~~e~-gI~~v~~d~r~~~~y-hGrV~a~~~~lre~Gl~~ 113 (114)
..+..+++-+.+. |.+++.+-. +...| .++...|.+++.+.|+++
T Consensus 123 ~~~~~~~~~l~~~~g~~~iaii~-~~~~~~~~~~~~~~~~l~~~g~~v 169 (356)
T 3ipc_A 123 QQGGIAGKYLADHFKDAKVAIIH-DKTPYGQGLADETKKAANAAGVTE 169 (356)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEE-CSSHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEEe-CCChHHHHHHHHHHHHHHHcCCEE
Confidence 3445566655554 888876542 33333 568899999999999875
No 131
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=41.85 E-value=59 Score=24.03 Aligned_cols=42 Identities=5% Similarity=-0.077 Sum_probs=29.4
Q ss_pred HHHHHHHHHhhCCCCEEEEecCCCc---chhhHHHHHHHHHHHcCc
Q 033657 69 IGKILGERLLLKDIPAVTVFLKREQ---RYHGKVKAVIDSLREAGV 111 (114)
Q Consensus 69 vG~~la~R~~e~gI~~v~~d~r~~~---~yhGrV~a~~~~lre~Gl 111 (114)
-|+.+++.+.+.|-.++.|- .+.. ....|...|.+++++.|+
T Consensus 171 ~~~~a~~~L~~~G~~~I~~i-~~~~~~~~~~~R~~Gf~~al~~~g~ 215 (348)
T 3bil_A 171 GIAAAVELLAHNNALPIGYL-SGPMDTSTGRERLEDFKAACANSKI 215 (348)
T ss_dssp HHHHHHHHHHHTTCCSEEEE-CCCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHCCCCeEEEE-eCCCCCccHHHHHHHHHHHHHHcCc
Confidence 34555555666798888765 2331 235699999999999997
No 132
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=41.84 E-value=35 Score=27.94 Aligned_cols=41 Identities=20% Similarity=0.253 Sum_probs=31.6
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHc-CcccC
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREA-GVKLL 114 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~-Gl~~~ 114 (114)
.++..|++.+.+.||+.+.--+ ++.+..|.+++.+. +|+++
T Consensus 13 ~~a~~l~~~L~~~GV~~vfg~P------G~~~~~l~~al~~~~~i~~i 54 (590)
T 1ybh_A 13 KGADILVEALERQGVETVFAYP------GGASMEIHQALTRSSSIRNV 54 (590)
T ss_dssp EHHHHHHHHHHTTTCCEEEECC------CGGGHHHHHHHHHCSSCEEC
T ss_pred cHHHHHHHHHHHcCCCEEEEcC------CCchHHHHHHHhccCCccEE
Confidence 5789999999999999984432 45678899998764 57764
No 133
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=41.66 E-value=35 Score=25.70 Aligned_cols=42 Identities=10% Similarity=0.180 Sum_probs=30.4
Q ss_pred HHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 71 KILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 71 ~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
.-+++.|.++|+..+++. ..|+.-+. ...+.+.+++.|+.++
T Consensus 78 ~~~~~ea~~~Gi~~vVi~-t~G~~~~~-~~~l~~~a~~~gi~vi 119 (288)
T 1oi7_A 78 ADAALEAAHAGIPLIVLI-TEGIPTLD-MVRAVEEIKALGSRLI 119 (288)
T ss_dssp HHHHHHHHHTTCSEEEEC-CSCCCHHH-HHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHCCCCEEEEE-CCCCCHHH-HHHHHHHHHHcCCEEE
Confidence 455788889999977765 35665443 5678888899998653
No 134
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=41.52 E-value=27 Score=28.37 Aligned_cols=41 Identities=7% Similarity=0.054 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHH-cCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLRE-AGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre-~Gl~~ 113 (114)
..+++.|++.+.+.||+.+..-+ ++.+..|.|++.+ .+|.+
T Consensus 8 ~~~a~~lv~~L~~~GV~~vFg~P------G~~~~~l~dal~~~~~i~~ 49 (556)
T 3hww_A 8 RRWAAVILEALTRHGVRHICIAP------GSRSTLLTLAAAENSAFIH 49 (556)
T ss_dssp HHHHHHHHHHHHTTTCCEEEECC------CTTSHHHHHHHHHCTTCEE
T ss_pred hHHHHHHHHHHHHCCCCEEEEcC------CCCcHHHHHHHhhCCCceE
Confidence 46889999999999999984432 3446678888865 46654
No 135
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=40.97 E-value=73 Score=22.87 Aligned_cols=57 Identities=14% Similarity=0.089 Sum_probs=38.6
Q ss_pred eEEEEEechhHhhhcccCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 41 TVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 41 ~~lasaST~e~~~k~~l~~~~n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
..|++.||.+|+. ++ ..++-+.+.||..- +..-+.++.-.++..+++.+++.|+++|
T Consensus 14 V~IimGS~SD~~v------------~~----~a~~~L~~~Gi~~d-v~V~SaHR~p~~l~~~~~~a~~~g~~Vi 70 (170)
T 1xmp_A 14 VGVIMGSTSDWET------------MK----YACDILDELNIPYE-KKVVSAHRTPDYMFEYAETARERGLKVI 70 (170)
T ss_dssp EEEEESSGGGHHH------------HH----HHHHHHHHTTCCEE-EEECCTTTSHHHHHHHHHHTTTTTCCEE
T ss_pred EEEEECcHHHHHH------------HH----HHHHHHHHcCCCEE-EEEEeccCCHHHHHHHHHHHHhCCCcEE
Confidence 4566777766653 33 33455567898832 2223688889999999999998888753
No 136
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=40.44 E-value=50 Score=24.16 Aligned_cols=44 Identities=14% Similarity=0.197 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCC--cchhhHHHHHHHHHHHcCc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKRE--QRYHGKVKAVIDSLREAGV 111 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~--~~yhGrV~a~~~~lre~Gl 111 (114)
+.-|+.+++.+.+.|..++.|-. +. .....|...|.+++++.|+
T Consensus 163 ~~~~~~a~~~L~~~G~~~I~~i~-~~~~~~~~~R~~Gf~~al~~~g~ 208 (339)
T 3h5o_A 163 EDAGAAITRHLLSRGKRRIGFLG-AQLDERVMKRLDGYRAALDAADC 208 (339)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEE-ESCCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHCCCCeEEEEe-CCCCccHHHHHHHHHHHHHHCCC
Confidence 34456666677778998876642 22 2335689999999999998
No 137
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=40.24 E-value=59 Score=23.99 Aligned_cols=45 Identities=20% Similarity=0.188 Sum_probs=32.2
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCCcch-hhHHHHHHHHHHHcCccc
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKREQRY-HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~~~y-hGrV~a~~~~lre~Gl~~ 113 (114)
..++.+++-+.+.|.+++.+-. ..+.| .+..+.|.+.+.+.|+++
T Consensus 128 ~~~~~~~~~l~~~g~~~vaii~-~~~~~g~~~~~~~~~~~~~~G~~v 173 (379)
T 3n0w_A 128 SIVKTVVQAQLAKGYKTWFLML-PDAAYGDLMNAAIRRELTAGGGQI 173 (379)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEE-ESSHHHHHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHHcCCcEEEEEe-cccchhHHHHHHHHHHHHHcCCEE
Confidence 4556667777778999876642 33333 457899999999999875
No 138
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=40.07 E-value=19 Score=29.35 Aligned_cols=40 Identities=20% Similarity=0.192 Sum_probs=30.5
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHc-Cccc
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREA-GVKL 113 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~-Gl~~ 113 (114)
.++..|++.+.+.||+.+..-+ ++.+..|++++.+. +|++
T Consensus 4 ~~a~~l~~~L~~~GV~~vfg~P------G~~~~~l~~al~~~~~i~~ 44 (566)
T 2vbi_A 4 TVGMYLAERLVQIGLKHHFAVA------GDYNLVLLDQLLLNKDMKQ 44 (566)
T ss_dssp BHHHHHHHHHHHHTCSEEEECC------CTTTHHHHHHHHTCTTSEE
T ss_pred CHHHHHHHHHHHcCCCEEEeCC------CCccHHHHHHHhcCCCCeE
Confidence 3688999999999999985443 34577788888765 6765
No 139
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=39.98 E-value=56 Score=22.88 Aligned_cols=49 Identities=6% Similarity=0.070 Sum_probs=30.8
Q ss_pred CHHHHHHHHHHHHHHHhhCCCCEEEEecCCC---cchhhHHHHHHHHHHHcCccc
Q 033657 62 DVAAASKIGKILGERLLLKDIPAVTVFLKRE---QRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 62 n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~---~~yhGrV~a~~~~lre~Gl~~ 113 (114)
|..+++..++.|.++.. |-.++.|- .+. .....|...|.+++++.|+.+
T Consensus 105 ~~~~g~~a~~~L~~~g~--g~~~I~~i-~g~~~~~~~~~R~~Gf~~al~~~g~~~ 156 (271)
T 2dri_A 105 NVLGGKIAGDYIAKKAG--EGAKVIEL-QGIAGTSAARERGEGFQQAVAAHKFNV 156 (271)
T ss_dssp HHHHHHHHHHHHHHHHC--TTCEEEEE-ECCTTCHHHHHHHHHHHHHHHHHTCEE
T ss_pred hHHHHHHHHHHHHHHcC--CCCeEEEE-ECCCCCccHhHHHHHHHHHHhcCCCEE
Confidence 44556666666555542 44566554 232 123569999999999999864
No 140
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=39.67 E-value=47 Score=23.86 Aligned_cols=43 Identities=21% Similarity=0.388 Sum_probs=29.4
Q ss_pred HHHHHHHHhh-CCCCEEEEecCCCcch-hhHHHHHHHHHHHcCccc
Q 033657 70 GKILGERLLL-KDIPAVTVFLKREQRY-HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 70 G~~la~R~~e-~gI~~v~~d~r~~~~y-hGrV~a~~~~lre~Gl~~ 113 (114)
++.+++-+.+ .|.+++.+-. +...| .++.+.|.+++.+.|+++
T Consensus 125 ~~~~~~~l~~~~g~~~i~~i~-~~~~~~~~~~~~~~~~l~~~g~~v 169 (346)
T 1usg_A 125 GPTAAKYILETVKPQRIAIIH-DKQQYGEGLARSVQDGLKAANANV 169 (346)
T ss_dssp HHHHHHHHHHTTCCSSEEEEE-CSSHHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHhcCCCeEEEEE-CCCchHHHHHHHHHHHHHHcCCEE
Confidence 5566666655 4888776542 33333 457899999999999864
No 141
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=39.02 E-value=61 Score=23.64 Aligned_cols=40 Identities=28% Similarity=0.282 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcc
Q 033657 63 VAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVK 112 (114)
Q Consensus 63 ~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~ 112 (114)
.++|..+|+.||++ |+.=| . |+. .|-..|.++++.++|-.
T Consensus 55 ~~~A~~lg~~La~~----g~~lV--s--GGg--~GiM~aa~~gAl~~gG~ 94 (217)
T 1wek_A 55 YEAGYRLGRALAEA----GFGVV--T--GGG--PGVMEAVNRGAYEAGGV 94 (217)
T ss_dssp HHHHHHHHHHHHHH----TCEEE--E--CSC--SHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHC----CCEEE--e--CCh--hhHHHHHHHHHHHcCCC
Confidence 46788888888875 65544 3 454 69999999999998743
No 142
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=38.89 E-value=57 Score=23.09 Aligned_cols=41 Identities=10% Similarity=0.127 Sum_probs=29.2
Q ss_pred HHHHHhhCCCCEEEEecCCCcchh-hHHHHHHHHHHHcCccc
Q 033657 73 LGERLLLKDIPAVTVFLKREQRYH-GKVKAVIDSLREAGVKL 113 (114)
Q Consensus 73 la~R~~e~gI~~v~~d~r~~~~yh-GrV~a~~~~lre~Gl~~ 113 (114)
..+.+.+.|++.|.+.......+. ..++.+.+.+++.||.+
T Consensus 22 ~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~ 63 (290)
T 2qul_A 22 TAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTV 63 (290)
T ss_dssp HHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCce
Confidence 356677889999988742211111 57889999999999875
No 143
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=38.89 E-value=55 Score=23.14 Aligned_cols=41 Identities=12% Similarity=0.128 Sum_probs=29.3
Q ss_pred HHHHHhhCCCCEEEEecCCCcch------hhHHHHHHHHHHHcCccc
Q 033657 73 LGERLLLKDIPAVTVFLKREQRY------HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 73 la~R~~e~gI~~v~~d~r~~~~y------hGrV~a~~~~lre~Gl~~ 113 (114)
..+.+.+.|++.+.++..+...+ ...++.+.+.+++.||.+
T Consensus 17 ~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~ 63 (285)
T 1qtw_A 17 AAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 (285)
T ss_dssp HHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCG
T ss_pred HHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 35778889999988753222211 257889999999999973
No 144
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*
Probab=38.85 E-value=46 Score=25.54 Aligned_cols=50 Identities=10% Similarity=0.056 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHH-HhhCCCCEEEEecCCC--------------cchhhHHHHHHHHHHHcCccc
Q 033657 63 VAAASKIGKILGER-LLLKDIPAVTVFLKRE--------------QRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 63 ~~Aa~~vG~~la~R-~~e~gI~~v~~d~r~~--------------~~yhGrV~a~~~~lre~Gl~~ 113 (114)
-+........|++. .++.|++-+.+|+ += .++-.-+++|++-+.+.||+|
T Consensus 35 e~~i~~~ad~~~~~gl~~~Gy~yv~iDd-gW~~~rd~~G~~~~d~~rFP~G~k~ladyih~~Glk~ 99 (400)
T 4do4_A 35 EQLFMEMADRMAQDGWRDMGYTYLNIDD-CWIGGRDASGRLMPDPKRFPHGIPFLADYVHSLGLKL 99 (400)
T ss_dssp HHHHHHHHHHHHHSSHHHHTCCEEECCS-SCEEEECTTCCEEECTTTSTTCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHCcchhhCCeEEEECC-CcccCCCCCCCEeECcccCCcccHHHHHHHHHCCceE
Confidence 44455556666665 5678999999996 21 122223999999999999987
No 145
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=38.72 E-value=42 Score=24.75 Aligned_cols=39 Identities=8% Similarity=-0.049 Sum_probs=29.8
Q ss_pred HHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCccc
Q 033657 71 KILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 71 ~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
+.++++|.++|++-+.+-+ .. ...+..+.+.+++.|+.+
T Consensus 112 ~~f~~~~~~aG~dgvii~d---l~-~ee~~~~~~~~~~~gl~~ 150 (262)
T 2ekc_A 112 EKFCRLSREKGIDGFIVPD---LP-PEEAEELKAVMKKYVLSF 150 (262)
T ss_dssp HHHHHHHHHTTCCEEECTT---CC-HHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHcCCCEEEECC---CC-HHHHHHHHHHHHHcCCcE
Confidence 5678899999999876532 22 256889999999999874
No 146
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=38.43 E-value=49 Score=23.46 Aligned_cols=43 Identities=9% Similarity=-0.045 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCC---cchhhHHHHHHHHHHHcCc
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKRE---QRYHGKVKAVIDSLREAGV 111 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~---~~yhGrV~a~~~~lre~Gl 111 (114)
..|+.+++.+.+.|-.++.|-. +. .....|...|.+++++.|+
T Consensus 124 ~~~~~a~~~L~~~G~~~I~~i~-~~~~~~~~~~R~~Gf~~~l~~~g~ 169 (293)
T 2iks_A 124 DDAEMLAEELRKFPAETVLYLG-ALPELSVSFLREQGFRTAWKDDPR 169 (293)
T ss_dssp HHHHHHHHHHHTSCCSSEEEEE-ECTTSHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHCCCCEEEEEe-cCcccccHHHHHHHHHHHHHHcCC
Confidence 4456667777778988876642 32 1235699999999999996
No 147
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=38.30 E-value=51 Score=23.09 Aligned_cols=44 Identities=11% Similarity=0.011 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhhC-C-CCEEEEecCCC---cchhhHHHHHHHHHHHcCcc
Q 033657 68 KIGKILGERLLLK-D-IPAVTVFLKRE---QRYHGKVKAVIDSLREAGVK 112 (114)
Q Consensus 68 ~vG~~la~R~~e~-g-I~~v~~d~r~~---~~yhGrV~a~~~~lre~Gl~ 112 (114)
..|+.+++.+.+. | ..++.|-. +. .....|...|.+++++.|+.
T Consensus 115 ~~g~~~~~~L~~~~G~~~~i~~i~-~~~~~~~~~~R~~gf~~~l~~~g~~ 163 (289)
T 3brs_A 115 QAGIRIGAVTKNLVRKSGKIGVIS-FVKNSKTAMDREEGLKIGLSDDSNK 163 (289)
T ss_dssp HHHHHHHHHHHHHTSSSCEEEEEE-SCTTSHHHHHHHHHHHHHHGGGGGG
T ss_pred HHHHHHHHHHHHHcCCCceEEEEE-CCCCCccHHHHHHHHHHHHHhCCCc
Confidence 3455555555554 6 88876652 32 12356999999999999875
No 148
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=37.96 E-value=34 Score=30.06 Aligned_cols=53 Identities=15% Similarity=0.310 Sum_probs=39.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhCCCCEEEE--------ecCCCc---chh------h-HHHHHHHHHHHcCc
Q 033657 58 GCTRDVAAASKIGKILGERLLLKDIPAVTV--------FLKREQ---RYH------G-KVKAVIDSLREAGV 111 (114)
Q Consensus 58 ~~~~n~~Aa~~vG~~la~R~~e~gI~~v~~--------d~r~~~---~yh------G-rV~a~~~~lre~Gl 111 (114)
..+.|.+.++.+|+.+|+-+...||+-. | |++++- .|+ | -..|+.+++++.|+
T Consensus 71 aat~d~~l~~~~g~~~g~E~ra~Gi~~~-laP~vdi~r~P~~gR~~EsfgeDP~lv~~~a~a~v~GlQ~~gV 141 (845)
T 3abz_A 71 ASTFDRDLLETAGKLMAKESIAKNAAVI-LGPTTNMQRGPLGGRGFESFSEDPYLAGMATSSVVKGMQGEGI 141 (845)
T ss_dssp HHTCCHHHHHHHHHHHHHHHHHTTCSEE-ECCBCCCCSSTTCTTGGGSCCSSHHHHHHHHHHHHHHHHHTTC
T ss_pred HhcCCHHHHHHHHHHHHHHHHHcCCCEE-ecceECCCcCCCCCcccccCCCCHHHHHHHHHHHHHHHhhCCe
Confidence 3467999999999999999999999863 2 223331 111 1 36789999999986
No 149
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125}
Probab=37.82 E-value=72 Score=25.37 Aligned_cols=53 Identities=13% Similarity=0.172 Sum_probs=40.6
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCCEEEEecCCCc----------------------------chhh-----HHHHHHHHH
Q 033657 60 TRDVAAASKIGKILGERLLLKDIPAVTVFLKREQ----------------------------RYHG-----KVKAVIDSL 106 (114)
Q Consensus 60 ~~n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~~----------------------------~yhG-----rV~a~~~~l 106 (114)
.-|-+........+++..++.|++-+++|+ +=+ ++-+ -++++++.+
T Consensus 25 ~i~e~~i~~~ad~~~~gl~~~G~~~~~iDD-gW~~~~~~~~~y~~~~~~~~d~~G~~~~~~~kFP~~~~~~Gl~~l~~~i 103 (433)
T 3cc1_A 25 SVTEEEVLGNAEYMANHLKKYGWEYIVVDI-QWYEPTANSSAYNPFAPLCMDEYGRLLPATNRFPSAKNGAGFKPLSDAI 103 (433)
T ss_dssp CCCHHHHHHHHHHHHHHTGGGTCCEEEECS-CTTCCCTTSTTCCTTSCSCBCTTSCBCCCTTTCGGGTTTTTTHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhcchhhCCeEEEECC-CcCCCCCcccccccccccccCCCCCEeECCccCCCcccCCCHHHHHHHH
Confidence 346666777777778888999999999997 311 2222 499999999
Q ss_pred HHcCccc
Q 033657 107 REAGVKL 113 (114)
Q Consensus 107 re~Gl~~ 113 (114)
++.||+|
T Consensus 104 h~~Glk~ 110 (433)
T 3cc1_A 104 HDLGLKF 110 (433)
T ss_dssp HHTTCEE
T ss_pred HHcCCee
Confidence 9999987
No 150
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=37.82 E-value=32 Score=24.44 Aligned_cols=40 Identities=18% Similarity=0.008 Sum_probs=29.0
Q ss_pred HHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCccc
Q 033657 73 LGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 73 la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
..+.|.+.|+..+++.. |.+.....+..+++.+.+.|+.+
T Consensus 89 ~i~~A~~lGa~~v~~~~-g~~~~~~~l~~l~~~a~~~Gv~l 128 (264)
T 1yx1_A 89 TLRRAEACGAGWLKVSL-GLLPEQPDLAALGRRLARHGLQL 128 (264)
T ss_dssp HHHHHHHTTCSEEEEEE-ECCCSSCCHHHHHHHHTTSSCEE
T ss_pred HHHHHHHcCCCEEEEec-CCCCcHHHHHHHHHHHHhcCCEE
Confidence 46667788999887764 44433447888888888888875
No 151
>2nyt_A Probable C->U-editing enzyme apobec-2; cytidine deaminase, zinc-ION binding, hydrolase; 2.50A {Homo sapiens} PDB: 2rpz_A
Probab=37.69 E-value=47 Score=23.95 Aligned_cols=41 Identities=20% Similarity=0.326 Sum_probs=25.9
Q ss_pred HHHHHhhC-----CCCEEEEecCCCcchhhHHHHHHHHHHHcCccc
Q 033657 73 LGERLLLK-----DIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 73 la~R~~e~-----gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
-|+...++ ||+.|+|-.+..+--.-.+..-++-|+++||++
T Consensus 97 Ca~aIi~al~~~~gI~rVV~~~~d~~~~~p~~~~g~~~L~~aGI~V 142 (190)
T 2nyt_A 97 CADRIIKTLSKTKNLRLLILVGRLFMWEEPEIQAALKKLKEAGCKL 142 (190)
T ss_pred HHHHHHHhhhhcCCccEEEEEeecCCcCChHHHHHHHHHHHCCCEE
Confidence 45666667 999998832211100123557778899999975
No 152
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=37.51 E-value=64 Score=23.79 Aligned_cols=50 Identities=6% Similarity=-0.102 Sum_probs=35.1
Q ss_pred CCHHHHHHHHHHHHHHHhhCCC-CEEEEecCCC--cchhhHHHHHHHHHHHcCcc
Q 033657 61 RDVAAASKIGKILGERLLLKDI-PAVTVFLKRE--QRYHGKVKAVIDSLREAGVK 112 (114)
Q Consensus 61 ~n~~Aa~~vG~~la~R~~e~gI-~~v~~d~r~~--~~yhGrV~a~~~~lre~Gl~ 112 (114)
.+.++++..| .+|..+.+.|. .++-|- .+. .....|...|.+++++.|++
T Consensus 108 d~~~~~~lag-~~a~~l~~~Gh~r~Ig~i-~g~~~~~~~~r~~Gf~~~~~~~~~~ 160 (318)
T 2fqx_A 108 GQNEGSFLVG-VAAALKAKEAGKSAVGFI-VGMELGMMPLFEAGFEAGVKAVDPD 160 (318)
T ss_dssp CHHHHHHHHH-HHHHHHHHHTTCCEEEEE-ESCCSTTTHHHHHHHHHHHHHHCTT
T ss_pred chHHHHHHHH-HHHHHHhccCCCcEEEEE-eCcccHHHHHHHHHHHHHHHHHCCC
Confidence 3567888888 55677778887 666553 222 22356899999999999975
No 153
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=36.66 E-value=97 Score=22.11 Aligned_cols=42 Identities=17% Similarity=0.086 Sum_probs=29.0
Q ss_pred HHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 72 ILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 72 ~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
..++-+.+.||..- +..-+.++.-.++..+++.+++.|+++|
T Consensus 23 ~a~~~l~~~gi~~e-v~V~SaHRtp~~l~~~~~~~~~~g~~Vi 64 (166)
T 3oow_A 23 ECCDILDNLGIGYE-CEVVSAHRTPDKMFDYAETAKERGLKVI 64 (166)
T ss_dssp HHHHHHHHTTCEEE-EEECCTTTCHHHHHHHHHHTTTTTCCEE
T ss_pred HHHHHHHHcCCCEE-EEEEcCcCCHHHHHHHHHHHHhCCCcEE
Confidence 34455567888521 1223678888999999999998887653
No 154
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=36.65 E-value=25 Score=26.65 Aligned_cols=39 Identities=8% Similarity=0.078 Sum_probs=27.7
Q ss_pred HHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCccc
Q 033657 71 KILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 71 ~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
+.++++|.++|++-+.+-| -.. .-...+.+.+++.|+++
T Consensus 115 ~~f~~~~~~aGvdGvIipD-lp~---ee~~~~~~~~~~~gl~~ 153 (271)
T 3nav_A 115 DDFYQRCQKAGVDSVLIAD-VPT---NESQPFVAAAEKFGIQP 153 (271)
T ss_dssp HHHHHHHHHHTCCEEEETT-SCG---GGCHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHCCCCEEEECC-CCH---HHHHHHHHHHHHcCCeE
Confidence 5688899999999875532 222 23677888888888864
No 155
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=36.55 E-value=59 Score=23.20 Aligned_cols=40 Identities=20% Similarity=0.207 Sum_probs=29.8
Q ss_pred HHHHhhCCCCEEEEecCCCc-chhhHHHHHHHHHHHcCccc
Q 033657 74 GERLLLKDIPAVTVFLKREQ-RYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 74 a~R~~e~gI~~v~~d~r~~~-~yhGrV~a~~~~lre~Gl~~ 113 (114)
.+++.+.|++.|.+...... .....++.+.+.+++.||++
T Consensus 27 l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~ 67 (290)
T 3tva_A 27 LEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQV 67 (290)
T ss_dssp HHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEE
Confidence 57788899999887742222 12456999999999999975
No 156
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=36.51 E-value=99 Score=21.86 Aligned_cols=39 Identities=15% Similarity=0.210 Sum_probs=28.2
Q ss_pred HHHHHhhCCCC-EEEEecCCCcchhhHHHHHHHHHHHc-Cccc
Q 033657 73 LGERLLLKDIP-AVTVFLKREQRYHGKVKAVIDSLREA-GVKL 113 (114)
Q Consensus 73 la~R~~e~gI~-~v~~d~r~~~~yhGrV~a~~~~lre~-Gl~~ 113 (114)
.++-+.+.||. ++.+ -+.++.-.++..+++.+++. |+++
T Consensus 21 a~~~l~~~gi~~ev~V--~saHR~p~~~~~~~~~a~~~~~~~V 61 (159)
T 3rg8_A 21 IASELKTFGIEYAIRI--GSAHKTAEHVVSMLKEYEALDRPKL 61 (159)
T ss_dssp HHHHHHHTTCEEEEEE--CCTTTCHHHHHHHHHHHHTSCSCEE
T ss_pred HHHHHHHcCCCEEEEE--EcccCCHHHHHHHHHHhhhcCCCcE
Confidence 34455678986 3333 37889999999999999885 5654
No 157
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}
Probab=36.33 E-value=40 Score=29.36 Aligned_cols=42 Identities=7% Similarity=0.094 Sum_probs=32.2
Q ss_pred HHHHHHHhhCCCCEEEEecCCC------------------cchhhHHHHHHHHHHHcCccc
Q 033657 71 KILGERLLLKDIPAVTVFLKRE------------------QRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 71 ~~la~R~~e~gI~~v~~d~r~~------------------~~yhGrV~a~~~~lre~Gl~~ 113 (114)
.-+|+.+++.|++-+++|+ |= .++-+-++.+++.+++.|++|
T Consensus 350 l~~ad~~~~~G~e~fviDD-GW~~~r~~d~~~~Gdw~~d~~kFP~Gl~~lv~~ih~~Glk~ 409 (745)
T 3mi6_A 350 MTIVNQAKRLGIEMFVLDD-GWFGHRDDDTTSLGDWFVDQRKFPDGIEHFSQAVHQQGMKF 409 (745)
T ss_dssp HHHHHHHHHHTCCEEEECT-TCBTTCSSTTSCTTCCSBCTTTCTTHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHcCCcEEEECc-ccccCCCCCcccCCCceeChhhcCccHHHHHHHHHHCCCEE
Confidence 3457778889999999997 21 123345999999999999987
No 158
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=36.27 E-value=1.2e+02 Score=22.03 Aligned_cols=57 Identities=11% Similarity=0.119 Sum_probs=38.3
Q ss_pred eEEEEEechhHhhhcccCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 41 TVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 41 ~~lasaST~e~~~k~~l~~~~n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
..|++.|+.+|+. ++ ..++-+.+.||..- +..-+.++.-.++..+++.+++.|+++|
T Consensus 24 V~IimGS~SD~~v------------~~----~a~~~L~~~Gi~~d-v~V~SaHR~p~~l~~~~~~a~~~g~~Vi 80 (182)
T 1u11_A 24 VGIIMGSQSDWET------------MR----HADALLTELEIPHE-TLIVSAHRTPDRLADYARTAAERGLNVI 80 (182)
T ss_dssp EEEEESSGGGHHH------------HH----HHHHHHHHTTCCEE-EEECCTTTCHHHHHHHHHHTTTTTCCEE
T ss_pred EEEEECcHHHHHH------------HH----HHHHHHHHcCCCeE-EEEEcccCCHHHHHHHHHHHHhCCCcEE
Confidence 4456667666543 33 33455567898832 2223688889999999999998888754
No 159
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=36.24 E-value=38 Score=25.79 Aligned_cols=44 Identities=11% Similarity=0.123 Sum_probs=31.1
Q ss_pred HHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHc-CcccC
Q 033657 69 IGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREA-GVKLL 114 (114)
Q Consensus 69 vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~-Gl~~~ 114 (114)
...-+++.|.++|+..+++.- .|...+. ...+.+.+++. |+.++
T Consensus 83 ~~~~~~~e~i~~Gi~~iv~~t-~G~~~~~-~~~l~~~a~~~~gi~li 127 (305)
T 2fp4_A 83 FAAAAINEAIDAEVPLVVCIT-EGIPQQD-MVRVKHRLLRQGKTRLI 127 (305)
T ss_dssp HHHHHHHHHHHTTCSEEEECC-CCCCHHH-HHHHHHHHTTCSSCEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEC-CCCChHH-HHHHHHHHHhcCCcEEE
Confidence 345567888999999976663 4554433 45788888998 98764
No 160
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=35.83 E-value=1.1e+02 Score=21.42 Aligned_cols=43 Identities=7% Similarity=-0.038 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHhh-CCCC-EEEEecCCCc---chhhHHHHHHHHHHHcC
Q 033657 67 SKIGKILGERLLL-KDIP-AVTVFLKREQ---RYHGKVKAVIDSLREAG 110 (114)
Q Consensus 67 ~~vG~~la~R~~e-~gI~-~v~~d~r~~~---~yhGrV~a~~~~lre~G 110 (114)
+..|+.+++.+.+ .|-. ++.+- .+.. ....|...|.+++++.|
T Consensus 110 ~~~g~~a~~~l~~~~g~~~~i~~i-~g~~~~~~~~~R~~gf~~~l~~~~ 157 (303)
T 3d02_A 110 EKFAAEYVEHMAKRMGGKGGYVIY-VGSLTVPQHNLWADLLVKYQKEHY 157 (303)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEE-CSCSSCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhCcCceEEEE-ecCCCCccHHHHHHHHHHHHHhhC
Confidence 3455666666666 6876 76654 2321 23568999999999875
No 161
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=35.76 E-value=69 Score=22.98 Aligned_cols=48 Identities=10% Similarity=0.063 Sum_probs=33.5
Q ss_pred CCHHHHHHHHHHHHHHHhh---CCCCEEEEecCCCc---chhhHHHHHHHHHHHc
Q 033657 61 RDVAAASKIGKILGERLLL---KDIPAVTVFLKREQ---RYHGKVKAVIDSLREA 109 (114)
Q Consensus 61 ~n~~Aa~~vG~~la~R~~e---~gI~~v~~d~r~~~---~yhGrV~a~~~~lre~ 109 (114)
.|..+++..++.|.+.+.+ .|..++.|- .+.. ....|...|.+++.+.
T Consensus 107 D~~~~g~~a~~~l~~~~~~~~~~G~~~i~~i-~g~~~~~~~~~R~~Gf~~al~~~ 160 (330)
T 3uug_A 107 DNFQVGVLQATSITDKLGLKDGKGPFNIELF-GGSPDDNNAFFFYDGAMSVLKPY 160 (330)
T ss_dssp CHHHHHHHHHHHHHHHHTGGGTCCCEEEEEC-BCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcccCCCCceEEEEE-ECCCCCchHHHHHHHHHHHHHhc
Confidence 3566777777777776665 488888765 2322 2356899999999987
No 162
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=35.25 E-value=61 Score=23.89 Aligned_cols=42 Identities=24% Similarity=0.419 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcc
Q 033657 66 ASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVK 112 (114)
Q Consensus 66 a~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~ 112 (114)
+.=+|+-+|+++.+.|.+-+..| |+ ..+.+.+++.+++.|-+
T Consensus 16 s~GIG~aiA~~la~~Ga~Vv~~~-~~----~~~~~~~~~~i~~~g~~ 57 (254)
T 4fn4_A 16 GSGIGRAIAKKFALNDSIVVAVE-LL----EDRLNQIVQELRGMGKE 57 (254)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEE-SC----HHHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHcCCEEEEEE-CC----HHHHHHHHHHHHhcCCc
Confidence 34689999999999998766666 43 35677778888777644
No 163
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A
Probab=34.99 E-value=47 Score=25.97 Aligned_cols=51 Identities=14% Similarity=0.292 Sum_probs=36.1
Q ss_pred CC--HHHHHHHHHHHHHHHhhCCCCEE---EEec-CC-----Ccchhh-------HHHHHHHHHHHcCc
Q 033657 61 RD--VAAASKIGKILGERLLLKDIPAV---TVFL-KR-----EQRYHG-------KVKAVIDSLREAGV 111 (114)
Q Consensus 61 ~n--~~Aa~~vG~~la~R~~e~gI~~v---~~d~-r~-----~~~yhG-------rV~a~~~~lre~Gl 111 (114)
.| .+.++.+|+++|+.+...||+-. ++|. |+ +..|+. -..|+.++++++|+
T Consensus 87 ~d~~~~la~~~g~~~a~E~ra~Gi~~~~aPv~Dv~~~~~~ig~rsfgeDP~lv~~~a~a~v~Glq~~gV 155 (340)
T 2oxn_A 87 AENGVELAEQGGWLMAAELIAHDVDLSFAPVLDMGFACKAIGNRAFGEDVQTVLKHSSAFLRGMKAVGM 155 (340)
T ss_dssp STTHHHHHHHHHHHHHHHHHTTTCCEECCCBCCCCSCSTTTGGGSSCSSHHHHHHHHHHHHHHHHHTTC
T ss_pred CCcHHHHHHHHHHHHHHHHHHhCCCEEecCccCCCCCCCcCcCCCCCCCHHHHHHHHHHHHHHHHHCCc
Confidence 56 79999999999999999999853 1122 11 111211 36789999999987
No 164
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=34.83 E-value=36 Score=26.26 Aligned_cols=52 Identities=17% Similarity=0.122 Sum_probs=34.9
Q ss_pred CCHHHHHHHHHHHHHH-HhhCCCCEEEEecCCCc---------------chhhHHHHHHHHHHHcCccc
Q 033657 61 RDVAAASKIGKILGER-LLLKDIPAVTVFLKREQ---------------RYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 61 ~n~~Aa~~vG~~la~R-~~e~gI~~v~~d~r~~~---------------~yhGrV~a~~~~lre~Gl~~ 113 (114)
-|.+........+++. +.+.|++-+++|+ +=+ ++-+-++++++-+++.|++|
T Consensus 23 ~~e~~i~~~ad~~~~~gl~~~G~~~v~iDd-gW~~~~rd~~G~~~~~~~~FP~Gl~~l~~~ih~~Glk~ 90 (362)
T 1uas_A 23 INEQIIRETADALVNTGLAKLGYQYVNIDD-CWAEYSRDSQGNFVPNRQTFPSGIKALADYVHAKGLKL 90 (362)
T ss_dssp CCHHHHHHHHHHHHHTSHHHHTCCEEECCS-SCBCSSCCTTSCCCBCTTTCTTCHHHHHHHHHHTTCEE
T ss_pred CCHHHHHHHHHHHHHcCchhcCCcEEEECC-CcCCCCCCCCCCeeEChhccCccHHHHHHHHHHCCCEe
Confidence 3545555544444333 2678999999996 311 23334999999999999987
No 165
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=33.78 E-value=57 Score=24.43 Aligned_cols=42 Identities=19% Similarity=0.110 Sum_probs=29.6
Q ss_pred HHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 71 KILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 71 ~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
.-+++.|.++|+.-+++. ..+...+ ....+.+.+++.|+.++
T Consensus 78 ~~~~~ea~~~Gi~~iVi~-t~G~~~~-~~~~l~~~A~~~gv~li 119 (288)
T 2nu8_A 78 KDSILEAIDAGIKLIITI-TEGIPTL-DMLTVKVKLDEAGVRMI 119 (288)
T ss_dssp HHHHHHHHHTTCSEEEEC-CCCCCHH-HHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHCCCCEEEEE-CCCCCHH-HHHHHHHHHHHcCCEEE
Confidence 445788999999986654 3455433 35678888999998653
No 166
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=33.61 E-value=96 Score=22.78 Aligned_cols=40 Identities=8% Similarity=-0.016 Sum_probs=29.2
Q ss_pred HHHHHhhCCCCEEEEecCCCcchh-----hHHHHHHHHHHHcCcc
Q 033657 73 LGERLLLKDIPAVTVFLKREQRYH-----GKVKAVIDSLREAGVK 112 (114)
Q Consensus 73 la~R~~e~gI~~v~~d~r~~~~yh-----GrV~a~~~~lre~Gl~ 112 (114)
..+.+.+.|++.|.+.......+. ..+..+.+.+.+.||.
T Consensus 36 ~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~l~~~gL~ 80 (335)
T 2qw5_A 36 HIKKLQRFGYSGFEFPIAPGLPENYAQDLENYTNLRHYLDSEGLE 80 (335)
T ss_dssp HHHHHHHTTCCEEEEECCCCCGGGHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHhCCCEEEEecCCCcccccccchHHHHHHHHHHHHCCCC
Confidence 356778899999887642232222 5688999999999997
No 167
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=33.40 E-value=78 Score=22.58 Aligned_cols=42 Identities=10% Similarity=0.094 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHh-hCCCCEEEEecCCC---cchhhHHHHHHHHHHHc
Q 033657 67 SKIGKILGERLL-LKDIPAVTVFLKRE---QRYHGKVKAVIDSLREA 109 (114)
Q Consensus 67 ~~vG~~la~R~~-e~gI~~v~~d~r~~---~~yhGrV~a~~~~lre~ 109 (114)
+..|+.+++.+. +.|-.++.|- .+. .....|...|.+++++.
T Consensus 107 ~~~g~~a~~~L~~~~G~~~i~~i-~g~~~~~~~~~R~~Gf~~~l~~~ 152 (313)
T 3m9w_A 107 EKVGELQAKALVDIVPQGNYFLM-GGSPVDNNAKLFRAGQMKVLKPY 152 (313)
T ss_dssp HHHHHHHHHHHHHHCSSEEEEEE-ESCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcEEEE-ECCCCCccHHHHHHHHHHHHHhh
Confidence 344555566666 5788888765 232 22355899999999988
No 168
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp}
Probab=33.40 E-value=1.3e+02 Score=23.86 Aligned_cols=52 Identities=29% Similarity=0.394 Sum_probs=37.7
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCC-EEEEecCCCcchhhH--HHHHHHHHHHcCccc
Q 033657 60 TRDVAAASKIGKILGERLLLKDIP-AVTVFLKREQRYHGK--VKAVIDSLREAGVKL 113 (114)
Q Consensus 60 ~~n~~Aa~~vG~~la~R~~e~gI~-~v~~d~r~~~~yhGr--V~a~~~~lre~Gl~~ 113 (114)
.-|.+.+..+|.-+|.-+.+.+-. .|++=. ..+.+|. -.|++.++..+|+++
T Consensus 18 ~lt~~~v~~~g~a~~~~l~~~~~~~~VvVG~--D~R~ss~~l~~a~~~gl~s~G~~V 72 (443)
T 3i3w_A 18 TITVEFTQKLGNAVGSLINQKNYPKFVIVGQ--DTRSSGGFLKFALVSGLNAAGIDV 72 (443)
T ss_dssp SBSHHHHHHHHHHHHHHHHHTTCCSEEEEEE--CSCTTHHHHHHHHHHHHHHHTCEE
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCCeEEEEe--CCCcCHHHHHHHHHHHHHHCCCeE
Confidence 457889999999999988776644 566531 3344554 457889999999875
No 169
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=33.31 E-value=30 Score=26.06 Aligned_cols=39 Identities=5% Similarity=-0.003 Sum_probs=28.2
Q ss_pred HHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCccc
Q 033657 71 KILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 71 ~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
+.++++|.++|++-+.+-| -.. .-...+.+.+++.|+++
T Consensus 113 e~f~~~~~~aGvdgvii~D-lp~---ee~~~~~~~~~~~gl~~ 151 (267)
T 3vnd_A 113 DEFYTKAQAAGVDSVLIAD-VPV---EESAPFSKAAKAHGIAP 151 (267)
T ss_dssp HHHHHHHHHHTCCEEEETT-SCG---GGCHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHcCCCEEEeCC-CCH---hhHHHHHHHHHHcCCeE
Confidence 5688999999999876643 222 23677888888888874
No 170
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=33.27 E-value=52 Score=23.53 Aligned_cols=38 Identities=11% Similarity=0.041 Sum_probs=28.0
Q ss_pred HHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCccc
Q 033657 73 LGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 73 la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
..+.+.+.|++.|.+.. . .+...+..+.+.+++.||.+
T Consensus 43 ~l~~~~~~G~~~vEl~~-~--~~~~~~~~~~~~l~~~gl~v 80 (287)
T 3kws_A 43 KLDFMEKLGVVGFEPGG-G--GLAGRVNEIKQALNGRNIKV 80 (287)
T ss_dssp HHHHHHHTTCCEEECBS-T--TCGGGHHHHHHHHTTSSCEE
T ss_pred HHHHHHHcCCCEEEecC-C--chHHHHHHHHHHHHHcCCeE
Confidence 45667788999887763 2 23567888888888888875
No 171
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=33.09 E-value=57 Score=24.51 Aligned_cols=41 Identities=20% Similarity=0.220 Sum_probs=28.6
Q ss_pred HHHHHHhhCCCCEEEEecCCCcchh-------------hHHHHHHHHHHHcCccc
Q 033657 72 ILGERLLLKDIPAVTVFLKREQRYH-------------GKVKAVIDSLREAGVKL 113 (114)
Q Consensus 72 ~la~R~~e~gI~~v~~d~r~~~~yh-------------GrV~a~~~~lre~Gl~~ 113 (114)
.-.++|.++|++.|.+++ +....| .+++..++.+++.|+.+
T Consensus 87 ~~i~~a~~aG~~~v~i~~-~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V 140 (302)
T 2ftp_A 87 KGFEAALESGVKEVAVFA-AASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRV 140 (302)
T ss_dssp HHHHHHHHTTCCEEEEEE-ESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHhCCcCEEEEEE-ecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeE
Confidence 346788899999998754 332322 34677788888888764
No 172
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=33.08 E-value=76 Score=22.38 Aligned_cols=40 Identities=5% Similarity=0.148 Sum_probs=28.5
Q ss_pred HHHHhhCCCCEEEEecCCCcch------hhHHHHHHHHHHHcCccc
Q 033657 74 GERLLLKDIPAVTVFLKREQRY------HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 74 a~R~~e~gI~~v~~d~r~~~~y------hGrV~a~~~~lre~Gl~~ 113 (114)
.+++.+.|++.+.+.......+ ...++.+.+.+++.||.+
T Consensus 18 l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~ 63 (287)
T 2x7v_A 18 PQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDW 63 (287)
T ss_dssp HHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCCG
T ss_pred HHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCCCc
Confidence 5677889999988753222111 257889999999999973
No 173
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=32.91 E-value=97 Score=21.70 Aligned_cols=40 Identities=18% Similarity=0.341 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcC
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAG 110 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~G 110 (114)
.-+|+-+|+++.+.|.+-+..+. .. ..+...+.+.+++.|
T Consensus 14 ~gIG~~ia~~l~~~G~~V~~~~~-~~---~~~~~~~~~~~~~~~ 53 (246)
T 3osu_A 14 RGIGRSIALQLAEEGYNVAVNYA-GS---KEKAEAVVEEIKAKG 53 (246)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEES-SC---HHHHHHHHHHHHHTT
T ss_pred ChHHHHHHHHHHHCCCEEEEEeC-CC---HHHHHHHHHHHHhcC
Confidence 46899999999999987666563 22 234555555555544
No 174
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=32.67 E-value=60 Score=23.29 Aligned_cols=39 Identities=13% Similarity=-0.117 Sum_probs=29.1
Q ss_pred HHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCccc
Q 033657 73 LGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 73 la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
..+.+.+.|++.|.+.. ...+...++.+.+.+++.||.+
T Consensus 46 ~l~~~~~~G~~~vEl~~--~~~~~~~~~~~~~~l~~~gl~~ 84 (290)
T 2zvr_A 46 GMELAKRVGYQAVEIAV--RDPSIVDWNEVKILSEELNLPI 84 (290)
T ss_dssp HHHHHHHHTCSEEEEEC--SCGGGSCHHHHHHHHHHHTCCE
T ss_pred HHHHHHHhCCCEEEEcC--CCcchhhHHHHHHHHHHcCCeE
Confidence 35567788999988764 2233456889999999999975
No 175
>1vq2_A DCMP deaminase, deoxycytidylate deaminase; hydrolase; HET: DDN; 2.20A {Enterobacteria phage T4} SCOP: c.97.1.2
Probab=32.62 E-value=18 Score=25.73 Aligned_cols=36 Identities=17% Similarity=0.139 Sum_probs=22.9
Q ss_pred HHHHHhhCCCCEEEEecCCCcch-hhHHHHHHHHHHHcCccc
Q 033657 73 LGERLLLKDIPAVTVFLKREQRY-HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 73 la~R~~e~gI~~v~~d~r~~~~y-hGrV~a~~~~lre~Gl~~ 113 (114)
-|+...++||++|+|-. .+.. .|. ..+-++++||++
T Consensus 135 Ca~aIi~aGI~rVvy~~--~~~~~~~~---~~~~l~~aGI~v 171 (193)
T 1vq2_A 135 CAKAIAQSGIKKLVYCE--TYDKNKPG---WDDILRNAGIEV 171 (193)
T ss_dssp HHHHHHHHTCCEEEEEE--CCTTCCTT---TTHHHHHTTCEE
T ss_pred HHHHHHHhCCCEEEEec--CCCCcchH---HHHHHHHCCCEE
Confidence 45666778999998753 2222 222 146688899875
No 176
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=32.36 E-value=96 Score=22.49 Aligned_cols=57 Identities=11% Similarity=0.081 Sum_probs=38.3
Q ss_pred eEEEEEechhHhhhcccCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 41 TVASSATSQEKALRSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 41 ~~lasaST~e~~~k~~l~~~~n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
..|++.||.+|+. ++ ..++-+.+.||..- +..-+.++.-.++..+++.+++.|+++|
T Consensus 16 V~IimGS~SD~~v------------~~----~a~~~L~~~Gi~~d-v~V~SaHR~p~~l~~~~~~a~~~g~~Vi 72 (183)
T 1o4v_A 16 VGIIMGSDSDLPV------------MK----QAAEILEEFGIDYE-ITIVSAHRTPDRMFEYAKNAEERGIEVI 72 (183)
T ss_dssp EEEEESCGGGHHH------------HH----HHHHHHHHTTCEEE-EEECCTTTCHHHHHHHHHHTTTTTCCEE
T ss_pred EEEEeccHHHHHH------------HH----HHHHHHHHcCCCeE-EEEEcccCCHHHHHHHHHHHHhCCCcEE
Confidence 4566777776653 33 33455567898721 2223688888999999999998888753
No 177
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A*
Probab=32.21 E-value=38 Score=28.59 Aligned_cols=53 Identities=17% Similarity=0.182 Sum_probs=38.1
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCCEE-------EEecCCCc---c-hh-------hHHHHHHHHHHHcCc
Q 033657 59 CTRDVAAASKIGKILGERLLLKDIPAV-------TVFLKREQ---R-YH-------GKVKAVIDSLREAGV 111 (114)
Q Consensus 59 ~~~n~~Aa~~vG~~la~R~~e~gI~~v-------~~d~r~~~---~-yh-------GrV~a~~~~lre~Gl 111 (114)
.+.|.+.++.+|+.+|+.+...||.-. .-|++++- + |+ --..|+.+++++.|+
T Consensus 146 at~d~~l~~~~g~~~a~E~ra~Gi~~~~aPvvDv~r~p~~grig~rsfgeDP~lv~~~a~a~v~Glq~~gV 216 (642)
T 3bmx_A 146 AARSRINAYQTGSIIGKELSALGINTDFSPVVDINNNPDNPVIGVRSFSSNRELTSRLGLYTMKGLQRQDI 216 (642)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHTCCEECCCBCCCCCCTTCSSSGGGSSCSSHHHHHHHHHHHHHHHHHTTC
T ss_pred hhCCHHHHHHHHHHHHHHHHHcCCCEEECCccccCCCCCCCcccccccCCCHHHHHHHHHHHHHHHHhCCc
Confidence 457899999999999999999999853 11233221 1 11 136789999999886
No 178
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=32.12 E-value=69 Score=23.68 Aligned_cols=45 Identities=18% Similarity=0.211 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhh-CCCCEEEEecCCCcch-hhHHHHHHHHHHHcCccc
Q 033657 68 KIGKILGERLLL-KDIPAVTVFLKREQRY-HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 68 ~vG~~la~R~~e-~gI~~v~~d~r~~~~y-hGrV~a~~~~lre~Gl~~ 113 (114)
..+..+++-+.+ .|.+++.+-. ....| .++.+.|.+++.+.|+++
T Consensus 128 ~~~~~~~~~l~~~~g~~~iaii~-~~~~~g~~~~~~~~~~l~~~G~~v 174 (392)
T 3lkb_A 128 EQVVALLEYIAREKKGAKVALVV-HPSPFGRAPVEDARKAARELGLQI 174 (392)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEE-CSSHHHHTTHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHHhCCCCEEEEEE-eCCchhhhHHHHHHHHHHHcCCeE
Confidence 345556666666 4889886643 33344 567899999999999875
No 179
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=32.05 E-value=1e+02 Score=21.65 Aligned_cols=41 Identities=15% Similarity=-0.040 Sum_probs=29.8
Q ss_pred HHHHHHhhCCCCEEEEecCCCc---chhhHHHHHHHHHHHcCccc
Q 033657 72 ILGERLLLKDIPAVTVFLKREQ---RYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 72 ~la~R~~e~gI~~v~~d~r~~~---~yhGrV~a~~~~lre~Gl~~ 113 (114)
-..+++.+.|++.|.+.. ... .-...++.+.+.+++.||++
T Consensus 34 ~~l~~~~~~G~~~vEl~~-~~~~~~~~~~~~~~~~~~l~~~gl~i 77 (257)
T 3lmz_A 34 TTLKTLERLDIHYLCIKD-FHLPLNSTDEQIRAFHDKCAAHKVTG 77 (257)
T ss_dssp HHHHHHHHTTCCEEEECT-TTSCTTCCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHhCCCEEEEec-ccCCCCCCHHHHHHHHHHHHHcCCeE
Confidence 346778889999988763 211 12456889999999999975
No 180
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=32.04 E-value=52 Score=23.28 Aligned_cols=51 Identities=12% Similarity=0.204 Sum_probs=34.1
Q ss_pred CCHHHHHHHHHHHHHHHhhCC--CCEE-EE--ecCCCcchhhHHHHHHHHHHHcCc
Q 033657 61 RDVAAASKIGKILGERLLLKD--IPAV-TV--FLKREQRYHGKVKAVIDSLREAGV 111 (114)
Q Consensus 61 ~n~~Aa~~vG~~la~R~~e~g--I~~v-~~--d~r~~~~yhGrV~a~~~~lre~Gl 111 (114)
.|..+++..++.|++.+-..| ..++ .+ ...+......|...|.+++.+.|+
T Consensus 109 D~~~~g~~a~~~l~~~~g~~~~~~~~i~~~~~~~~~~~~~~~R~~Gf~~~l~~~g~ 164 (306)
T 8abp_A 109 AATKIGERQGQELYKEMQKRGWDVKESAVMAITANELDTARRRTTGSMDALKAAGF 164 (306)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEECTTSHHHHHHHHHHHHHHHHHTC
T ss_pred ChhHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCChHHHHHHHHHHHHHHhcCC
Confidence 467888888888887765554 1122 22 222223456799999999999986
No 181
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=32.02 E-value=44 Score=24.73 Aligned_cols=45 Identities=11% Similarity=0.126 Sum_probs=27.6
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCccc
Q 033657 60 TRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 60 ~~n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
..|++++. ++..+||.|.||+.+++.-.+|+ --..+++.+ .|+++
T Consensus 25 ~eNT~~tl---~la~era~e~~Ik~iVVAS~sG~----TA~k~~e~~--~~i~l 69 (201)
T 1vp8_A 25 RENTEETL---RLAVERAKELGIKHLVVASSYGD----TAMKALEMA--EGLEV 69 (201)
T ss_dssp GGGHHHHH---HHHHHHHHHHTCCEEEEECSSSH----HHHHHHHHC--TTCEE
T ss_pred cccHHHHH---HHHHHHHHHcCCCEEEEEeCCCh----HHHHHHHHh--cCCeE
Confidence 34655554 45688999999999988743332 124445544 45554
No 182
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=31.67 E-value=59 Score=20.70 Aligned_cols=35 Identities=20% Similarity=0.221 Sum_probs=22.7
Q ss_pred HhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCccc
Q 033657 77 LLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 77 ~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
+.+.+++++++-. +...+..+..+++.+.+.|+++
T Consensus 61 ~~~~~id~viia~--~~~~~~~~~~i~~~l~~~gv~v 95 (141)
T 3nkl_A 61 IKKHCISTVLLAV--PSASQVQKKVIIESLAKLHVEV 95 (141)
T ss_dssp HHHHTCCEEEECC--TTSCHHHHHHHHHHHHTTTCEE
T ss_pred HHHCCCCEEEEeC--CCCCHHHHHHHHHHHHHcCCeE
Confidence 3445778776653 3333567777888888888765
No 183
>1owl_A Photolyase, deoxyribodipyrimidine photolyase; DNA repair, flavin enzyme, photoreactivating enzyme; HET: FAD; 1.80A {Synechococcus elongatus} SCOP: a.99.1.1 c.28.1.1 PDB: 1owm_A* 1own_A* 1owo_A* 1owp_A* 1qnf_A* 1tez_A*
Probab=31.51 E-value=78 Score=25.48 Aligned_cols=43 Identities=14% Similarity=0.075 Sum_probs=30.9
Q ss_pred HHHHHHHHhhCCCCEEEEecCCCcc-hhhHHHHHHHHHHHcCccc
Q 033657 70 GKILGERLLLKDIPAVTVFLKREQR-YHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 70 G~~la~R~~e~gI~~v~~d~r~~~~-yhGrV~a~~~~lre~Gl~~ 113 (114)
..+|.+-+.+.|++.|+++. .... ...+-+++.+.+.+.||.+
T Consensus 81 ~~~l~~l~~~~~~~~v~~~~-~~~p~~~~rd~~v~~~l~~~gi~~ 124 (484)
T 1owl_A 81 QHLIPQLAQQLQAEAVYWNQ-DIEPYGRDRDGQVAAALKTAGIRA 124 (484)
T ss_dssp HHHHHHHHHHTTCSEEEEEC-CCSHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHcCCCEEEEec-cCChhHHHHHHHHHHHHHHcCcEE
Confidence 45667778889999998873 3222 2446778888888889875
No 184
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=31.45 E-value=1e+02 Score=21.91 Aligned_cols=40 Identities=18% Similarity=0.265 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcC
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAG 110 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~G 110 (114)
.-+|+.+|+++.+.|.+-+..+ |.. ....+++.+.+++.|
T Consensus 39 ~gIG~~la~~l~~~G~~V~~~~-r~~---~~~~~~~~~~~~~~~ 78 (271)
T 4iin_A 39 KGIGAEIAKTLASMGLKVWINY-RSN---AEVADALKNELEEKG 78 (271)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE-SSC---HHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHCCCEEEEEe-CCC---HHHHHHHHHHHHhcC
Confidence 4689999999999998766555 433 233444444444444
No 185
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=31.33 E-value=71 Score=24.16 Aligned_cols=38 Identities=13% Similarity=0.175 Sum_probs=28.7
Q ss_pred HHHhhCCCCEEEEecCCCc----------chhhHHHHHHHHHHHcCccc
Q 033657 75 ERLLLKDIPAVTVFLKREQ----------RYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 75 ~R~~e~gI~~v~~d~r~~~----------~yhGrV~a~~~~lre~Gl~~ 113 (114)
++..+.|..-|.+.+ +.. ..-.||+++.++.++.|+.|
T Consensus 99 ~~l~~aGaagv~iED-~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~ 146 (275)
T 2ze3_A 99 EHFAALGVAGVNLED-ATGLTPTELYDLDSQLRRIEAARAAIDASGVPV 146 (275)
T ss_dssp HHHHHTTCSEEEEEC-BCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHcCCcEEEECC-CcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCe
Confidence 444458999999886 332 45679999999999888876
No 186
>2hvw_A Deoxycytidylate deaminase; 3-layer (alpha-beta)-sandwich, protein-liand complex, hydrolase; HET: DCP DDN; 1.67A {Streptococcus mutans} PDB: 2hvv_A*
Probab=31.27 E-value=32 Score=24.63 Aligned_cols=36 Identities=19% Similarity=0.216 Sum_probs=23.8
Q ss_pred HHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCccc
Q 033657 73 LGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 73 la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
-++...++||++|+|-. .+.... ...+-|+++||++
T Consensus 136 Ca~aIi~agI~rVVy~~--~~~~~~---~~~~~L~~aGIeV 171 (184)
T 2hvw_A 136 CTKALLQAGVKKITYNT--AYRIHP---FAIELMTQKEVEY 171 (184)
T ss_dssp HHHHHHHHTEEEEEEEE--CCSCCH---HHHHHHHHHTCEE
T ss_pred HHHHHHHHCCCeEEEEe--cCCCCH---HHHHHHHHCCCEE
Confidence 45667789999998753 221111 1278899999976
No 187
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=31.19 E-value=53 Score=26.98 Aligned_cols=40 Identities=10% Similarity=0.075 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHc-Cccc
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREA-GVKL 113 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~-Gl~~ 113 (114)
..++.|++.+.+.||+.+.--+ ++....|++++.+. +|++
T Consensus 28 ~~a~~l~~~L~~~GV~~vfg~P------G~~~~~l~~al~~~~~i~~ 68 (616)
T 2pan_A 28 RAVDAAMYVLEKEGITTAFGVP------GAAINPFYSAMRKHGGIRH 68 (616)
T ss_dssp EHHHHHHHHHHHTTCCEEEECC------CGGGHHHHHHHHHHCCCEE
T ss_pred cHHHHHHHHHHHCCCCEEEECC------CCccHHHHHHHHhcCCCcE
Confidence 4678899999999999985443 45577788888764 5765
No 188
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus}
Probab=31.17 E-value=1.7e+02 Score=23.30 Aligned_cols=58 Identities=22% Similarity=0.296 Sum_probs=41.2
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEecCCCcchhhH--HHHHHHHHHHcCccc
Q 033657 54 RSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGK--VKAVIDSLREAGVKL 113 (114)
Q Consensus 54 k~~l~~~~n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGr--V~a~~~~lre~Gl~~ 113 (114)
++..+..-|.+.+..+|+-+|.-+.+.|-..|++=. ..+++|. -.+++.++..+|+++
T Consensus 20 RG~~~~~lt~~~v~~~~~a~~~~l~~~~~~~VvVG~--D~R~ss~~~~~a~a~gl~~~G~~V 79 (464)
T 1tuo_A 20 RGVIAREFTFATLHRLAEAYGRHLLERGGGLVVVGH--DTRFLADAFARALSGHLAGMGLKV 79 (464)
T ss_dssp EEEBTTTBCHHHHHHHHHHHHHHHHHTTCCEEEEEE--CSSTTHHHHHHHHHHHHHHHTCEE
T ss_pred ceecCCCcCHHHHHHHHHHHHHHHHHhCCCeEEEee--CCCCCHHHHHHHHHHHHHHCCCeE
Confidence 333333458889999999999999887644565532 3344554 578999999999875
No 189
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=31.01 E-value=64 Score=24.14 Aligned_cols=40 Identities=13% Similarity=0.174 Sum_probs=28.5
Q ss_pred HHHHHhhCCCCEEEEecCCCcchh-------------hHHHHHHHHHHHcCccc
Q 033657 73 LGERLLLKDIPAVTVFLKREQRYH-------------GKVKAVIDSLREAGVKL 113 (114)
Q Consensus 73 la~R~~e~gI~~v~~d~r~~~~yh-------------GrV~a~~~~lre~Gl~~ 113 (114)
-.+++.++|++.+.++. +..-.| .++...++.+++.|+.+
T Consensus 85 ~i~~a~~ag~~~v~i~~-~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v 137 (298)
T 2cw6_A 85 GFEAAVAAGAKEVVIFG-AASELFTKKNINCSIEESFQRFDAILKAAQSANISV 137 (298)
T ss_dssp HHHHHHHTTCSEEEEEE-ESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred hHHHHHHCCCCEEEEEe-cCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeE
Confidence 47889999999988875 333223 25666788888888764
No 190
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=30.96 E-value=57 Score=22.93 Aligned_cols=51 Identities=8% Similarity=-0.008 Sum_probs=31.0
Q ss_pred CHHHHHHHHHHHHHHHhh--CCCCE--EEEecCCC--c-chhhHHHHHHHHHHHc-Cccc
Q 033657 62 DVAAASKIGKILGERLLL--KDIPA--VTVFLKRE--Q-RYHGKVKAVIDSLREA-GVKL 113 (114)
Q Consensus 62 n~~Aa~~vG~~la~R~~e--~gI~~--v~~d~r~~--~-~yhGrV~a~~~~lre~-Gl~~ 113 (114)
|..+++..++.|.+++-. .|..+ +.+- .+. . ....|.+.|.+++.+. |+++
T Consensus 107 ~~~~~~~~~~~L~~~~g~~~~G~r~i~i~~l-~g~~~~~~~~~R~~gf~~~l~~~~g~~~ 165 (290)
T 2fn9_A 107 NYYGGVLAGEYFVKFLKEKYPDAKEIPYAEL-LGILSAQPTWDRSNGFHSVVDQYPEFKM 165 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSSCSCEEEEEE-ECCTTCHHHHHHHHHHHHHHTTSTTEEE
T ss_pred HHHHHHHHHHHHHHHhcccCCcccceeEEEE-EcCCCCchHHHHHHHHHHHHHhCCCCEE
Confidence 445556666665555321 17777 5443 222 2 2356999999999998 8764
No 191
>4acy_A Endo-alpha-mannosidase; hydrolase, endomannosidase, glycoside hydrolase, CAZY, enzyme-carbohydrate interaction, mannose; HET: MSE; 1.69A {Bacteroides thetaiotaomicron} PDB: 4acz_A 4ad0_A* 4acz_B
Probab=30.79 E-value=28 Score=27.69 Aligned_cols=39 Identities=13% Similarity=0.141 Sum_probs=30.5
Q ss_pred HHHHhhCCCCEEEEecCCC--cchhhHHHHHHHHHHHcCccc
Q 033657 74 GERLLLKDIPAVTVFLKRE--QRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 74 a~R~~e~gI~~v~~d~r~~--~~yhGrV~a~~~~lre~Gl~~ 113 (114)
-+.|+++||+-++++. .+ ......+..+++++.+.|++|
T Consensus 109 i~~ak~aGIDgfal~w-~~~~~~~d~~l~~~~~aA~~~g~k~ 149 (382)
T 4acy_A 109 IRMHIKANVGVLSVTW-WGESDYGNQSVSLLLDEAAKVGAKV 149 (382)
T ss_dssp HHHHHHHTEEEEEEEE-CGGGGTTCHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHcCCCEEEEEe-cCCCCchHHHHHHHHHHHHHcCCEE
Confidence 4667888999999884 32 234567999999999999886
No 192
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=30.69 E-value=60 Score=23.95 Aligned_cols=42 Identities=19% Similarity=0.180 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcc
Q 033657 66 ASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVK 112 (114)
Q Consensus 66 a~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~ 112 (114)
+.-+|+-+|+++.+.|.+=+..| |+ ..+.+..++.+++.|-+
T Consensus 18 s~GIG~aia~~la~~Ga~Vvi~~-~~----~~~~~~~~~~l~~~g~~ 59 (255)
T 4g81_D 18 ARGLGFAYAEGLAAAGARVILND-IR----ATLLAESVDTLTRKGYD 59 (255)
T ss_dssp SSHHHHHHHHHHHHTTCEEEECC-SC----HHHHHHHHHHHHHTTCC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEE-CC----HHHHHHHHHHHHhcCCc
Confidence 34689999999999998755555 43 34566777777776643
No 193
>2hnh_A DNA polymerase III alpha subunit; DNA replication, nucleotidyltransferase, beta, PHP, transferase; HET: DNA; 2.30A {Escherichia coli} PDB: 2hqa_A*
Probab=30.62 E-value=47 Score=29.50 Aligned_cols=41 Identities=17% Similarity=0.149 Sum_probs=30.5
Q ss_pred HHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 71 KILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 71 ~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
+-|+++|++.|++.+.+.|++. ..|- ..|.+++++.||++|
T Consensus 25 ~elv~~A~~~Gl~alAITDH~~--~~G~-~~~~~~~~~~gIk~I 65 (910)
T 2hnh_A 25 APLVKKAAALGMPALAITDFTN--LCGL-VKFYGAGHGAGIKPI 65 (910)
T ss_dssp HHHHHHHHHTTCSEEEECCBTC--CTTH-HHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHCCCCEEEEEeCCc--chhH-HHHHHHHHHCCCeEE
Confidence 3578999999999999988552 2343 446677788999865
No 194
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=30.52 E-value=58 Score=23.10 Aligned_cols=48 Identities=17% Similarity=0.284 Sum_probs=29.6
Q ss_pred CHHHHHHHHHHHHHHHhhCC--CCEEEEecCCCc---chhhHHHHHHHHHHHc-Cccc
Q 033657 62 DVAAASKIGKILGERLLLKD--IPAVTVFLKREQ---RYHGKVKAVIDSLREA-GVKL 113 (114)
Q Consensus 62 n~~Aa~~vG~~la~R~~e~g--I~~v~~d~r~~~---~yhGrV~a~~~~lre~-Gl~~ 113 (114)
|..+++..++.|.+++ | -.++.|- .+.. ....|...|.+++++. |+++
T Consensus 114 ~~~~g~~a~~~L~~~~---G~~~~~I~~i-~g~~~~~~~~~R~~Gf~~al~~~~g~~~ 167 (288)
T 1gud_A 114 NVAVGAKGASFIIDKL---GAEGGEVAII-EGKAGNASGEARRNGATEAFKKASQIKL 167 (288)
T ss_dssp HHHHHHHHHHHHHHHH---GGGCEEEEEE-ECSTTCHHHHHHHHHHHHHHHTCTTEEE
T ss_pred hHHHHHHHHHHHHHHh---CCCCCEEEEE-eCCCCCchHhHHHHHHHHHHHhCCCcEE
Confidence 4445555555554443 6 6777654 2321 2356999999999988 8753
No 195
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=30.47 E-value=1.3e+02 Score=24.69 Aligned_cols=48 Identities=4% Similarity=-0.094 Sum_probs=34.8
Q ss_pred CHHHHHHHHHHHHHHHhhCCCCEEEEecCCCcchh-----------hHHHHHHHHHHHcC
Q 033657 62 DVAAASKIGKILGERLLLKDIPAVTVFLKREQRYH-----------GKVKAVIDSLREAG 110 (114)
Q Consensus 62 n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~~~yh-----------GrV~a~~~~lre~G 110 (114)
+.+.|-.-...+.++|.++|.+.|-|| .+...+. .|.+.+.+.+.+.|
T Consensus 105 ~~~~am~~a~e~i~~aI~AGFtSVMiD-~S~~p~eeNi~lt~evva~rtaeL~~~A~~~~ 163 (450)
T 3txv_A 105 PADEAMAKAEAMITAYAKAGFTKLHLD-TSMGCAGEPTALPDATTAARAARLAAVAEDAV 163 (450)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCCEEEEC-CCBCCSSSCSBCCHHHHHHHHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHHHHHHHHcCCCEEEEC-CCCCchhhccchhHHHHHHHHHHHHHHHHHHH
Confidence 466777777899999999999999998 4544433 25566666666643
No 196
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=30.40 E-value=85 Score=23.65 Aligned_cols=50 Identities=12% Similarity=-0.124 Sum_probs=21.5
Q ss_pred CHHHHHHHHHHHHHHHhhCCCCEEEEecCCCc-chhhHHHHHHHHHHHcCcc
Q 033657 62 DVAAASKIGKILGERLLLKDIPAVTVFLKREQ-RYHGKVKAVIDSLREAGVK 112 (114)
Q Consensus 62 n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~~-~yhGrV~a~~~~lre~Gl~ 112 (114)
+.+.+...-+...+.|++.|+. |.|+..... .--..+..+++.+.+.|..
T Consensus 115 s~~e~l~~~~~~v~~a~~~g~~-v~~~~~d~~~~~~~~~~~~~~~~~~~G~~ 165 (293)
T 3ewb_X 115 SRAEVLASIKHHISYARQKFDV-VQFSPEDATRSDRAFLIEAVQTAIDAGAT 165 (293)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSC-EEEEEETGGGSCHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHHHHhCCCE-EEEEeccCCCCCHHHHHHHHHHHHHcCCC
Confidence 4444444444445555555543 223221111 1123345555555555543
No 197
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=30.38 E-value=55 Score=24.98 Aligned_cols=41 Identities=12% Similarity=0.020 Sum_probs=29.6
Q ss_pred HHHHhhCCCCEEEEe----cCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 74 GERLLLKDIPAVTVF----LKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 74 a~R~~e~gI~~v~~d----~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
-+.+++.|+..|.+. +.+++-.-..+..+++.+++.||+++
T Consensus 33 ~~ilk~~G~n~vRlri~v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ 77 (334)
T 1fob_A 33 ETILADAGINSIRQRVWVNPSDGSYDLDYNLELAKRVKAAGMSLY 77 (334)
T ss_dssp HHHHHHHTCCEEEEEECSCCTTCTTCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHcCCCEEEEEEEECCCCCccCHHHHHHHHHHHHHCCCEEE
Confidence 355667899988763 22444445678889999999999874
No 198
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=30.13 E-value=36 Score=28.72 Aligned_cols=41 Identities=17% Similarity=0.296 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHH-cCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLRE-AGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre-~Gl~~ 113 (114)
...++.|++.+.+.||+.+.--+ ++.+..|++++.+ .+|++
T Consensus 82 ~~~a~~lv~~L~~~GV~~vFg~P------G~~~~pl~dal~~~~~i~~ 123 (677)
T 1t9b_A 82 LTGGQIFNEMMSRQNVDTVFGYP------GGAILPVYDAIHNSDKFNF 123 (677)
T ss_dssp CBHHHHHHHHHHHTTCCEEEECC------CGGGHHHHHHTTTCSSSEE
T ss_pred CCHHHHHHHHHHHcCCCEEEEec------CccHHHHHHHHHhCCCCeE
Confidence 36789999999999999985442 4567778888865 45665
No 199
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=30.08 E-value=90 Score=22.62 Aligned_cols=41 Identities=20% Similarity=0.187 Sum_probs=30.8
Q ss_pred HHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 73 LGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 73 la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
.++-+.+.||..-+ ..=+.++.-.++..+++.+++.|+++|
T Consensus 41 a~~~L~~~gI~~e~-~V~SAHRtp~~l~~~~~~a~~~g~~Vi 81 (181)
T 4b4k_A 41 ACDILDELNIPYEK-KVVSAHRTPDYMFEYAETARERGLKVI 81 (181)
T ss_dssp HHHHHHHTTCCEEE-EECCTTTSHHHHHHHHHHTTTTTCCEE
T ss_pred HHHHHHHcCCCeeE-EEEccccChHHHHHHHHHHHhcCceEE
Confidence 34556778998321 223788999999999999999998764
No 200
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=30.06 E-value=54 Score=23.83 Aligned_cols=21 Identities=24% Similarity=0.241 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHhhCCCC
Q 033657 63 VAAASKIGKILGERLLLKDIP 83 (114)
Q Consensus 63 ~~Aa~~vG~~la~R~~e~gI~ 83 (114)
-..+|.+|..+++...+.|++
T Consensus 12 ~~~sY~~G~~~g~~l~~~~~~ 32 (213)
T 1fd9_A 12 DKLSYSIGADLGKNFKNQGID 32 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHhcCcc
Confidence 457999999999999888875
No 201
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=30.01 E-value=30 Score=24.42 Aligned_cols=52 Identities=2% Similarity=0.091 Sum_probs=31.6
Q ss_pred CHHHHHHHHHHHHHHH-hhCCC--CEEEEec--CCCcchhhHHHHHHHHHHHc-Cccc
Q 033657 62 DVAAASKIGKILGERL-LLKDI--PAVTVFL--KREQRYHGKVKAVIDSLREA-GVKL 113 (114)
Q Consensus 62 n~~Aa~~vG~~la~R~-~e~gI--~~v~~d~--r~~~~yhGrV~a~~~~lre~-Gl~~ 113 (114)
|..+++..++.|.+++ -..|- .++.|-. .+......|...|.+++++. |+++
T Consensus 112 ~~~~g~~~~~~l~~~~~g~~~~~~~~i~~i~g~~~~~~~~~R~~gf~~~l~~~~g~~~ 169 (293)
T 3l6u_A 112 NQMIGEQLASYIKNELIKQTGRSTGRIVEITGTANVYTTNERHRGFLKGIENEPTLSI 169 (293)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCSCEEEEEEECSTTCHHHHHHHHHHHHHHTTCTTEEE
T ss_pred HHHHHHHHHHHHHHHhccCCCCCCceEEEEECCCCCchHHHHHHHHHHHHHhCCCcEE
Confidence 5566777777766653 21211 1554442 11223456999999999999 9865
No 202
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=30.01 E-value=60 Score=24.13 Aligned_cols=40 Identities=15% Similarity=0.135 Sum_probs=0.0
Q ss_pred HHHHhhCCCCEEEEe------------cCCCcchhhHHHHHHHHHHHcCccc
Q 033657 74 GERLLLKDIPAVTVF------------LKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 74 a~R~~e~gI~~v~~d------------~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
.++|+++|++.|.++ .++...--.++...++.+++.|+.+
T Consensus 85 i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V 136 (295)
T 1ydn_A 85 YEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAI 136 (295)
T ss_dssp HHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeE
No 203
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=29.81 E-value=45 Score=28.63 Aligned_cols=54 Identities=19% Similarity=0.296 Sum_probs=38.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhCCCCEE---EEe-----cCCCc--c-hh-------hHHHHHHHHHHHcCc
Q 033657 58 GCTRDVAAASKIGKILGERLLLKDIPAV---TVF-----LKREQ--R-YH-------GKVKAVIDSLREAGV 111 (114)
Q Consensus 58 ~~~~n~~Aa~~vG~~la~R~~e~gI~~v---~~d-----~r~~~--~-yh-------GrV~a~~~~lre~Gl 111 (114)
..+.|.+.++.+|+.+|+.+...||+-. ++| ++++- . |+ --..|+.+++++.|+
T Consensus 82 aat~d~~l~~~~g~~~g~E~ra~Gi~~~laP~vd~v~r~P~~gR~~e~fgeDP~l~~~~a~a~v~Glq~~gV 153 (713)
T 3zyz_A 82 ASTWDVNLIRERGQFIGEEVKASGIHVILGPVAGPLGKTPQGGRNWEGFGVDPYLTGIAMGQTINGIQSVGV 153 (713)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHTTCSEECCCBCSSCCCSTTCTTGGGTTCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred HhcCCHHHHHHHHHHHHHHHHhcCCCEEECCeecccCCCCCCCcccccccCCHHHHHHHHHHHHHHHhhCCe
Confidence 3457899999999999999999999854 123 22221 1 11 146788999999886
No 204
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis}
Probab=29.80 E-value=1.4e+02 Score=23.90 Aligned_cols=58 Identities=26% Similarity=0.287 Sum_probs=39.7
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHhhC-CCCEEEEecCCCcchhhH--HHHHHHHHHHcCccc
Q 033657 54 RSSIGCTRDVAAASKIGKILGERLLLK-DIPAVTVFLKREQRYHGK--VKAVIDSLREAGVKL 113 (114)
Q Consensus 54 k~~l~~~~n~~Aa~~vG~~la~R~~e~-gI~~v~~d~r~~~~yhGr--V~a~~~~lre~Gl~~ 113 (114)
++..+..-|.+.+..+|+-+|.-+.+. +-..|++=. ..+++|. -.+++.++..+|+++
T Consensus 32 RG~~~~~lt~~~v~~~g~a~~~~l~~~~~~~~VvIG~--D~R~ss~~~~~a~a~gl~s~Gi~V 92 (469)
T 3pdk_A 32 RGVANKELTPELAFKIGRFGGYVLTKDTDRPKVIIGR--DTRISGHMLEGALVAGLLSTGAEV 92 (469)
T ss_dssp EEEBTTTBCHHHHHHHHHHHHHHHHTTCSSCEEEEEE--CSCTTHHHHHHHHHHHHHTTTCEE
T ss_pred eeecCCCCCHHHHHHHHHHHHHHHHhhCCCCeEEEEe--CCCCCHHHHHHHHHHHHHHCCCEE
Confidence 333344568899999999999988763 334565531 2344554 568889999999875
No 205
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=29.58 E-value=93 Score=22.17 Aligned_cols=42 Identities=14% Similarity=0.368 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcC
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAG 110 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~G 110 (114)
.-+|+-+|+++.+.|.+-+.++ |.. +-..+...+++.+++.|
T Consensus 21 ~GIG~aia~~la~~G~~V~~~~-r~~-~~~~~~~~~~~~~~~~~ 62 (262)
T 3ksu_A 21 KNLGALTAKTFALESVNLVLHY-HQA-KDSDTANKLKDELEDQG 62 (262)
T ss_dssp SHHHHHHHHHHTTSSCEEEEEE-SCG-GGHHHHHHHHHHHHTTT
T ss_pred chHHHHHHHHHHHCCCEEEEEe-cCc-cCHHHHHHHHHHHHhcC
Confidence 4588889999988887655555 322 22345556666665544
No 206
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=29.54 E-value=20 Score=26.52 Aligned_cols=46 Identities=9% Similarity=0.104 Sum_probs=35.9
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCC-cchhhHHHHHHHHHHHcCcccC
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKRE-QRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~-~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
-+|++-+.-+++.|++-|.+- .+. -.+.+-+..+++.+.+.||+.|
T Consensus 72 ~TGeis~~~l~~~Ga~~Vllg-hseRR~~~~e~~~k~~~A~~~GL~~i 118 (226)
T 1w0m_A 72 HTAHVSLENIKEAGGSGVILN-HSEAPLKLNDLARLVAKAKSLGLDVV 118 (226)
T ss_dssp CTTCCBHHHHHHHTCCEEEEC-CTTSCCBHHHHHHHHHHHHHTTCEEE
T ss_pred ccCCCCHHHHHHcCCCEEEEe-eeeccCCHHHHHHHHHHHHHCCCEEE
Confidence 477888888999999998664 333 2567779999999999999753
No 207
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=29.20 E-value=19 Score=26.60 Aligned_cols=46 Identities=17% Similarity=0.221 Sum_probs=36.2
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCC-cchhhHHHHHHHHHHHcCcccC
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKRE-QRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~-~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
-+|++-+.-+++.|++-|.+- .+. -.+++-+..+++.+.+.||+.|
T Consensus 75 ~TGeis~~~l~~~Ga~~Vllg-hseRR~~~~e~~~k~~~A~~~GL~~i 121 (225)
T 1hg3_A 75 HTGHVLPEAVKEAGAVGTLLN-HSENRMILADLEAAIRRAEEVGLMTM 121 (225)
T ss_dssp CTTCCCHHHHHHTTCCEEEES-CGGGCCBHHHHHHHHHHHHHHTCEEE
T ss_pred ccCcccHHHHHHcCCCEEEEC-cchhcCCHHHHHHHHHHHHHCCCEEE
Confidence 478888999999999998663 322 1567779999999999999753
No 208
>3ckm_A YRAM (HI1655), LPOA; periplasmic-binding protein, lipoprotein, unliganded, biosynthetic protein; 1.35A {Haemophilus influenzae} SCOP: c.93.1.1
Probab=29.02 E-value=48 Score=24.27 Aligned_cols=44 Identities=5% Similarity=-0.066 Sum_probs=31.7
Q ss_pred HHHHHHHHHhhCCCCEEEEecCCCcch-hhHHHHHHHHHHHcCccc
Q 033657 69 IGKILGERLLLKDIPAVTVFLKREQRY-HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 69 vG~~la~R~~e~gI~~v~~d~r~~~~y-hGrV~a~~~~lre~Gl~~ 113 (114)
-+..+|+.+.+.|.+++.+-. ..+-| .+-.++|.+.+.+.|.++
T Consensus 111 ~~~~~a~~~~~~g~k~~~ii~-~~~~yg~~~~~~f~~~~~~~Gg~v 155 (327)
T 3ckm_A 111 EAESAANKMWNDGVRNPLVAM-PQNDLGQRVGNAFNVRWQQLAGTD 155 (327)
T ss_dssp HHHHHHHHHHHTTCCSCEEEE-ESSHHHHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHhcCCeeEEEEe-cCChHHHHHHHHHHHHHHHCCCeE
Confidence 466778888888988765432 23444 566888999999999875
No 209
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=28.73 E-value=1.2e+02 Score=21.07 Aligned_cols=39 Identities=21% Similarity=0.250 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcC
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAG 110 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~G 110 (114)
.-+|+.+|+++.+.|.+-+..+ |+. .+...+.+.+++.|
T Consensus 15 ~gIG~~~a~~l~~~G~~v~~~~-r~~----~~~~~~~~~~~~~~ 53 (247)
T 3lyl_A 15 RGIGFEVAHALASKGATVVGTA-TSQ----ASAEKFENSMKEKG 53 (247)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE-SSH----HHHHHHHHHHHHTT
T ss_pred ChHHHHHHHHHHHCCCEEEEEe-CCH----HHHHHHHHHHHhcC
Confidence 4689999999999997655555 432 34455555555544
No 210
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=28.72 E-value=1.5e+02 Score=21.52 Aligned_cols=46 Identities=24% Similarity=0.242 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhh-CCCCEEEEecCCCcch-hhHHHHHHHHHHHcCccc
Q 033657 68 KIGKILGERLLL-KDIPAVTVFLKREQRY-HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 68 ~vG~~la~R~~e-~gI~~v~~d~r~~~~y-hGrV~a~~~~lre~Gl~~ 113 (114)
..++.+++-+.+ .|.+++.+-......| .+..+.|.+++++.|+++
T Consensus 134 ~~~~~~~~~l~~~~g~~~iaii~~~~~~~~~~~~~~~~~~~~~~G~~v 181 (366)
T 3td9_A 134 FQGAAMAVFAYKNLGAKRVVVFTDVEQDYSVGLSNFFINKFTELGGQV 181 (366)
T ss_dssp HHHHHHHHHHHHTSCCCEEEEEEETTCHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHhcCCcEEEEEEeCCCcHHHHHHHHHHHHHHHCCCEE
Confidence 446667777755 5999876541112233 457889999999999875
No 211
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=28.51 E-value=60 Score=26.67 Aligned_cols=40 Identities=18% Similarity=0.259 Sum_probs=29.3
Q ss_pred HHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 72 ILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 72 ~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
-..+.|.++|+. +++. ..|+. ...-..+.+.+++.|+.+|
T Consensus 51 ~~v~e~~~~Gv~-~vii-s~Gf~-~~~~~~l~~~A~~~g~rli 90 (480)
T 3dmy_A 51 ELANQALDRNLN-VMMF-SDNVT-LEDEIQLKTRAREKGLLVM 90 (480)
T ss_dssp HHHHHHHHTTCE-EEEC-CCCCC-HHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHhcCCC-EEEE-CCCCC-HHHHHHHHHHHHHcCCEEE
Confidence 346779999999 6665 46765 2345678889999999764
No 212
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=28.50 E-value=1.2e+02 Score=22.12 Aligned_cols=41 Identities=15% Similarity=0.109 Sum_probs=28.8
Q ss_pred HHHHHhhCCCCEEEEecCCCcc-hh-----hHHHHHHHHHHHcCccc
Q 033657 73 LGERLLLKDIPAVTVFLKREQR-YH-----GKVKAVIDSLREAGVKL 113 (114)
Q Consensus 73 la~R~~e~gI~~v~~d~r~~~~-yh-----GrV~a~~~~lre~Gl~~ 113 (114)
+.+.+.+.|++.|.+....... +. ..++.+.+.+.+.||.+
T Consensus 40 ~~~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~i 86 (316)
T 3qxb_A 40 AGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRKAGLTI 86 (316)
T ss_dssp HHHHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHHcCCeE
Confidence 3466789999999886422211 11 26888999999999975
No 213
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=28.45 E-value=93 Score=23.87 Aligned_cols=34 Identities=18% Similarity=-0.039 Sum_probs=14.6
Q ss_pred HHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHH
Q 033657 74 GERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLR 107 (114)
Q Consensus 74 a~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lr 107 (114)
++++.+.|++.+.+-|..|...-..+..+.+.++
T Consensus 175 ~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~ 208 (337)
T 3ble_A 175 VEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLI 208 (337)
T ss_dssp HHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHH
Confidence 3444444444444433334444444444444443
No 214
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=28.39 E-value=87 Score=17.86 Aligned_cols=21 Identities=24% Similarity=0.271 Sum_probs=17.9
Q ss_pred CcchhhHHHHHHHHHHHcCcc
Q 033657 92 EQRYHGKVKAVIDSLREAGVK 112 (114)
Q Consensus 92 ~~~yhGrV~a~~~~lre~Gl~ 112 (114)
....+|.|-.+++.++++|+.
T Consensus 54 ~~~~y~~vv~vmd~l~~aG~~ 74 (74)
T 2jwk_A 54 KEVPYEEVIKALNLLHLAGIK 74 (74)
T ss_dssp TTSCHHHHHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHHHHHHHcCCC
Confidence 445689999999999999974
No 215
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=28.34 E-value=51 Score=23.93 Aligned_cols=44 Identities=14% Similarity=0.231 Sum_probs=28.4
Q ss_pred HHHHHHHHHhh--CCCCEEEEecCCC--c-chhhHHHHHHHHHHHc-Cccc
Q 033657 69 IGKILGERLLL--KDIPAVTVFLKRE--Q-RYHGKVKAVIDSLREA-GVKL 113 (114)
Q Consensus 69 vG~~la~R~~e--~gI~~v~~d~r~~--~-~yhGrV~a~~~~lre~-Gl~~ 113 (114)
.|+.+++.+.+ .|..++.|- .+. . ....|...|.+++.+. |+++
T Consensus 113 ~g~~a~~~L~~~~~G~~~I~~i-~~~~~~~~~~~R~~Gf~~al~~~pg~~~ 162 (325)
T 2x7x_A 113 IGRSVGNYIASSLKGKGNIVEL-TGLSGSTPAMERHQGFMAAISKFPDIKL 162 (325)
T ss_dssp HHHHHHHHHHHHTTTEEEEEEE-ESCTTSHHHHHHHHHHHHHHHTCTEEEE
T ss_pred HHHHHHHHHHHHcCCCceEEEE-ECCCCCccHHHHHHHHHHHHHhCCCCEE
Confidence 34444555555 377887664 232 1 2356899999999998 8764
No 216
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=27.87 E-value=81 Score=24.80 Aligned_cols=52 Identities=17% Similarity=0.144 Sum_probs=37.0
Q ss_pred CCHHHHHHHHHHHHH-HHhhCCCCEEEEecCCCc---------------chhhHHHHHHHHHHHcCccc
Q 033657 61 RDVAAASKIGKILGE-RLLLKDIPAVTVFLKREQ---------------RYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 61 ~n~~Aa~~vG~~la~-R~~e~gI~~v~~d~r~~~---------------~yhGrV~a~~~~lre~Gl~~ 113 (114)
-|.+........+++ .+++.|++-+++|+ |=+ ++-+-++++++-+++.|++|
T Consensus 23 ~~e~~i~~~ad~~~~~gl~~~G~~~~~iDd-gW~~~~r~~~G~~~~~~~kFP~Gl~~l~~~i~~~Glk~ 90 (397)
T 3a5v_A 23 VDEQLILDAAKAIASSGLKDLGYNYVIIDD-CWQKNERESSKTLLADPTKFPRGIKPLVDDIHNLGLKA 90 (397)
T ss_dssp CCHHHHHHHHHHHHHHTHHHHTCCEEECCS-SCBCSSCCTTSCCCBCTTTCTTCHHHHHHHHHHTTCEE
T ss_pred CCHHHHHHHHHHHHHcCCcccCceEEEECC-CcCCCCCCCCCCeEEChhcCCcCHHHHHHHHHHcCCEE
Confidence 455666666666666 34458999999986 311 23334999999999999987
No 217
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=27.77 E-value=91 Score=23.84 Aligned_cols=47 Identities=15% Similarity=0.170 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhhCCCCEEEEecC---------CCcchhh----------------HHHHHHHHHHHcCcccC
Q 033657 68 KIGKILGERLLLKDIPAVTVFLK---------REQRYHG----------------KVKAVIDSLREAGVKLL 114 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r---------~~~~yhG----------------rV~a~~~~lre~Gl~~~ 114 (114)
.|.+.+..-+.+.|++.|.+-+- +..-||| -.+.|.++|-+.||++|
T Consensus 23 ~ia~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~dy~i~~~~Gt~~df~~lv~~aH~~Gi~Vi 94 (496)
T 4gqr_A 23 DIALECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIY 94 (496)
T ss_dssp HHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCccCceeCCCCCCHHHHHHHHHHHHHCCCEEE
Confidence 34444455567799999977431 1111344 49999999999999875
No 218
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=27.68 E-value=46 Score=23.34 Aligned_cols=39 Identities=21% Similarity=0.152 Sum_probs=27.7
Q ss_pred HHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCccc
Q 033657 73 LGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 73 la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
..+.+.+.|++.|.+.. .......++.+.+.+.+.||++
T Consensus 23 ~l~~~~~~G~~~vEl~~--~~~~~~~~~~~~~~l~~~gl~~ 61 (275)
T 3qc0_A 23 AVDICLKHGITAIAPWR--DQVAAIGLGEAGRIVRANGLKL 61 (275)
T ss_dssp HHHHHHHTTCCEEECBH--HHHHHHCHHHHHHHHHHHTCEE
T ss_pred HHHHHHHcCCCEEEecc--ccccccCHHHHHHHHHHcCCce
Confidence 35667788999887653 2223456888888888888875
No 219
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=27.48 E-value=71 Score=22.50 Aligned_cols=44 Identities=11% Similarity=0.107 Sum_probs=27.6
Q ss_pred HHHHHHHHHhhC-C-CCEEEEecCCC---cchhhHHHHHHHHHHHc-Cccc
Q 033657 69 IGKILGERLLLK-D-IPAVTVFLKRE---QRYHGKVKAVIDSLREA-GVKL 113 (114)
Q Consensus 69 vG~~la~R~~e~-g-I~~v~~d~r~~---~~yhGrV~a~~~~lre~-Gl~~ 113 (114)
-|+.+++.+.+. | -.++.+- .+. .....|.+.|.+++++. |+++
T Consensus 108 ~g~~a~~~L~~~~gg~~~I~~i-~g~~~~~~~~~R~~Gf~~al~~~~~~~~ 157 (283)
T 2ioy_A 108 GGEMAAEFIAKALKGKGNVVEL-EGIPGASAARDRGKGFDEAIAKYPDIKI 157 (283)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEE-ECCTTCHHHHHHHHHHHHHHTTCTTEEE
T ss_pred HHHHHHHHHHHHcCCCceEEEE-ECCCCCccHHHHHHHHHHHHHhCCCCEE
Confidence 344445555554 4 6777654 232 22356899999999998 8754
No 220
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=27.43 E-value=22 Score=29.21 Aligned_cols=40 Identities=20% Similarity=0.260 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHc--Cccc
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREA--GVKL 113 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~--Gl~~ 113 (114)
..++.|++.+.+.||+.+.--+ ++.+..|++++.+. +|++
T Consensus 5 ~~a~~lv~~L~~~GV~~vfg~P------G~~~~~l~~al~~~~~~i~~ 46 (590)
T 1v5e_A 5 NIGLAVMKILESWGADTIYGIP------SGTLSSLMDAMGEEENNVKF 46 (590)
T ss_dssp EHHHHHHHHHHHTTCCEEEECC------CTTTHHHHTTSSSTTCCCEE
T ss_pred cHHHHHHHHHHHcCCCEEEEec------CCchHHHHHHHHhcCCCCeE
Confidence 3578999999999999985443 34466788887664 5654
No 221
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=27.33 E-value=1e+02 Score=22.14 Aligned_cols=39 Identities=31% Similarity=0.418 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcC
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAG 110 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~G 110 (114)
.-+|+.+|+++.+.|.+-+.++ |+ ..+...+++.+++.|
T Consensus 34 ~GIG~aia~~la~~G~~V~~~~-r~----~~~~~~~~~~l~~~~ 72 (279)
T 3sju_A 34 SGIGLAVARTLAARGIAVYGCA-RD----AKNVSAAVDGLRAAG 72 (279)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE-SC----HHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHHCCCEEEEEe-CC----HHHHHHHHHHHHhcC
Confidence 4689999999999998755555 43 334555555555544
No 222
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=27.33 E-value=1e+02 Score=23.00 Aligned_cols=22 Identities=5% Similarity=-0.061 Sum_probs=10.4
Q ss_pred CHHHHHHHHHHHHHHHhhCCCC
Q 033657 62 DVAAASKIGKILGERLLLKDIP 83 (114)
Q Consensus 62 n~~Aa~~vG~~la~R~~e~gI~ 83 (114)
+.+.+...-....+.|++.|+.
T Consensus 115 ~~~e~l~~~~~~i~~a~~~G~~ 136 (298)
T 2cw6_A 115 SIEESFQRFDAILKAAQSANIS 136 (298)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHHHHHHHHCCCe
Confidence 3344444444445555555543
No 223
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=27.27 E-value=1e+02 Score=22.21 Aligned_cols=43 Identities=7% Similarity=-0.076 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhhC-C-CCEEEEecCCCc--chhhHHHHHHHHHHHcCc
Q 033657 68 KIGKILGERLLLK-D-IPAVTVFLKREQ--RYHGKVKAVIDSLREAGV 111 (114)
Q Consensus 68 ~vG~~la~R~~e~-g-I~~v~~d~r~~~--~yhGrV~a~~~~lre~Gl 111 (114)
..|+.+++.+.+. | -.++.|- .+.. ....|...|.+++.+.|+
T Consensus 159 ~~g~~a~~~L~~~~Gg~~~I~~i-~~~~~~~~~~R~~Gf~~~l~~~~~ 205 (342)
T 1jx6_A 159 EGSRELATEFGKFFPKHTYYSVL-YFSEGYISDVRGDTFIHQVNRDNN 205 (342)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEE-CCSTTHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCCceEEEE-EcCCcchhhHHHHHHHHHHHhCCC
Confidence 3455555555664 6 8888765 3332 235689999999999886
No 224
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=27.19 E-value=59 Score=29.14 Aligned_cols=43 Identities=21% Similarity=0.329 Sum_probs=34.0
Q ss_pred HHHHHHhhCCCCEEEEec--------CCCcchhhH--HHHHHHHHHHcCcccC
Q 033657 72 ILGERLLLKDIPAVTVFL--------KREQRYHGK--VKAVIDSLREAGVKLL 114 (114)
Q Consensus 72 ~la~R~~e~gI~~v~~d~--------r~~~~yhGr--V~a~~~~lre~Gl~~~ 114 (114)
...++++++|+.-|.+.. +|.|-+.|. +..|++.++|+||.+|
T Consensus 40 d~l~kmka~G~NtV~~yvfW~~hEP~~G~fdF~g~~dL~~fl~~a~e~Gl~Vi 92 (971)
T 1tg7_A 40 DIFEKVKALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQPFFDAAKEAGIYLL 92 (971)
T ss_dssp HHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHcCCCEEEEeccHHHhCCCCCeecccchHHHHHHHHHHHHcCCEEE
Confidence 457889999999987632 345666775 9999999999999764
No 225
>2h4a_A YRAM (HI1655); perplasmic binding protein, lipoprotein; 1.35A {Haemophilus influenzae} PDB: 3ckm_A
Probab=27.08 E-value=53 Score=24.78 Aligned_cols=43 Identities=5% Similarity=-0.047 Sum_probs=31.2
Q ss_pred HHHHHHHHhhCCCCEEEEecCCCcch-hhHHHHHHHHHHHcCccc
Q 033657 70 GKILGERLLLKDIPAVTVFLKREQRY-HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 70 G~~la~R~~e~gI~~v~~d~r~~~~y-hGrV~a~~~~lre~Gl~~ 113 (114)
|+.+|+.+.+.|++++.+-. ...-| .+-.++|.+.+.+.|.++
T Consensus 110 ~~~~a~~a~~~g~k~vail~-~~~~yG~~~~~~F~~~~~~~Gg~v 153 (325)
T 2h4a_A 110 AESAANKMWNDGVRNPLVAM-PQNDLGQRVGNAFNVRWQQLAGTD 153 (325)
T ss_dssp HHHHHHHHHHTTCCSCEEEE-ESSHHHHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHcCCCeEEEEE-cCCcHHHHHHHHHHHHHHHcCCCc
Confidence 67888888888998765432 23445 456788999999988765
No 226
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=26.88 E-value=1.3e+02 Score=22.38 Aligned_cols=43 Identities=19% Similarity=0.214 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCC-CcchhhHHHHHHHHHHHcC
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKR-EQRYHGKVKAVIDSLREAG 110 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~-~~~yhGrV~a~~~~lre~G 110 (114)
.-+|+.+|+++.+.|.+-+..+ |. ..+-..++..+.+.+++.|
T Consensus 15 ~GIG~aia~~L~~~G~~V~~~~-r~~~~r~~~~~~~l~~~~~~~~ 58 (324)
T 3u9l_A 15 SGFGRLTAEALAGAGHRVYASM-RDIVGRNASNVEAIAGFARDND 58 (324)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE-SCTTTTTHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHCCCEEEEec-CcccccCHHHHHHHHHHHHhcC
Confidence 4589999999999997655444 43 2233445666666655554
No 227
>2gfq_A UPF0204 protein PH0006; structural genomics, PSI, Pro structure initiative, midwest center for structural genomic unknown function; 1.75A {Pyrococcus horikoshii} SCOP: c.56.7.1
Probab=26.49 E-value=1e+02 Score=23.90 Aligned_cols=39 Identities=13% Similarity=0.094 Sum_probs=27.9
Q ss_pred HHHHhhC---CCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 74 GERLLLK---DIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 74 a~R~~e~---gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
-++|.++ |++.+++| +.+ ...+--..+.+.+.+.||.++
T Consensus 253 l~~ai~~~~~~~~~~~iD-~K~-~k~~~R~~i~~~l~~lgi~v~ 294 (298)
T 2gfq_A 253 MIKALNRFGEKVEAIYVD-WKG-SRGETRQLAKSLAQELGLEFI 294 (298)
T ss_dssp HHHHHTCBSSCCCEEEEE-STT-SCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHhhcCCCCEEEEe-cCC-CCHHHHHHHHHHHHHCCCEEE
Confidence 3667766 89999999 445 335556677778888898764
No 228
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=26.40 E-value=1.4e+02 Score=20.80 Aligned_cols=41 Identities=7% Similarity=0.111 Sum_probs=29.4
Q ss_pred HHHHHhhCCCCEEEEecCC-----------Ccc-hhhHHHHHHHHHHHcCccc
Q 033657 73 LGERLLLKDIPAVTVFLKR-----------EQR-YHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 73 la~R~~e~gI~~v~~d~r~-----------~~~-yhGrV~a~~~~lre~Gl~~ 113 (114)
..+++.+.|++.|.+.... .+. -...++.+.+.+.+.||++
T Consensus 27 ~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i 79 (262)
T 3p6l_A 27 ALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKI 79 (262)
T ss_dssp HHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeE
Confidence 4677888999999876311 011 1346899999999999975
No 229
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=26.39 E-value=1.4e+02 Score=21.45 Aligned_cols=41 Identities=20% Similarity=0.177 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcC
Q 033657 66 ASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAG 110 (114)
Q Consensus 66 a~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~G 110 (114)
+.-+|+-+|+++.+.|.+-+.+|++ . ..+.+.+++.+.+.|
T Consensus 38 s~GIG~aia~~la~~G~~V~~~~~~-~---~~~~~~~~~~~~~~~ 78 (280)
T 4da9_A 38 RRGIGLGIARALAASGFDIAITGIG-D---AEGVAPVIAELSGLG 78 (280)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEESC-C---HHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCC-C---HHHHHHHHHHHHhcC
Confidence 3468889999999988876666632 2 234455555555444
No 230
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=26.29 E-value=72 Score=21.26 Aligned_cols=23 Identities=13% Similarity=0.143 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHhhC-CCCEEEEec
Q 033657 67 SKIGKILGERLLLK-DIPAVTVFL 89 (114)
Q Consensus 67 ~~vG~~la~R~~e~-gI~~v~~d~ 89 (114)
-.+|..+|+.+.+. |..-+.+|.
T Consensus 48 G~~G~~~a~~L~~~~g~~V~vid~ 71 (183)
T 3c85_A 48 GRIGTGAYDELRARYGKISLGIEI 71 (183)
T ss_dssp SHHHHHHHHHHHHHHCSCEEEEES
T ss_pred CHHHHHHHHHHHhccCCeEEEEEC
Confidence 47899999999998 998777873
No 231
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=26.28 E-value=71 Score=25.91 Aligned_cols=39 Identities=13% Similarity=0.016 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGV 111 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl 111 (114)
..++..|++.+.+.||+.+..-+ ++.+..|++++.+.++
T Consensus 21 ~~~a~~lv~~L~~~GV~~vfg~P------G~~~~~l~~al~~~~~ 59 (565)
T 2nxw_A 21 MKLAEALLRALKDRGAQAMFGIP------GDFALPFFKVAEETQI 59 (565)
T ss_dssp CBHHHHHHHHHHHTTCCCEEECC------CGGGHHHHHHHHHHCS
T ss_pred cCHHHHHHHHHHHcCCCEEEECC------CcchHHHHHHHHhCCC
Confidence 35789999999999999985443 4557778888876653
No 232
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=26.24 E-value=1.2e+02 Score=23.22 Aligned_cols=40 Identities=13% Similarity=0.037 Sum_probs=28.6
Q ss_pred HHHHHHhhCCCCEEEEecCCCcchhh---HHHHHHHHHHHcCcc
Q 033657 72 ILGERLLLKDIPAVTVFLKREQRYHG---KVKAVIDSLREAGVK 112 (114)
Q Consensus 72 ~la~R~~e~gI~~v~~d~r~~~~yhG---rV~a~~~~lre~Gl~ 112 (114)
-..++|++.|++.|=|| -+...|.. ..+.+++-+...|+.
T Consensus 88 e~i~~ai~~GFtSVMiD-gS~lp~eeNi~~Tk~vv~~ah~~gvs 130 (286)
T 1gvf_A 88 DDIRRKVHAGVRSAMID-GSHFPFAENVKLVKSVVDFCHSQDCS 130 (286)
T ss_dssp HHHHHHHHTTCCEEEEC-CTTSCHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHcCCCeEEEC-CCCCCHHHHHHHHHHHHHHHHHcCCE
Confidence 45678888999998887 46677766 445666677777764
No 233
>3o21_A Glutamate receptor 3; periplasmatic binding protein, oligomerization, membrane, TR protein; HET: NAG; 2.20A {Rattus norvegicus} PDB: 3p3w_A
Probab=26.22 E-value=1.1e+02 Score=23.09 Aligned_cols=44 Identities=7% Similarity=0.072 Sum_probs=30.0
Q ss_pred HHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCccc
Q 033657 69 IGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 69 vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
.+..+++-+...|.+.|.+-..+.| ..+.++.|.+.+.+.|+++
T Consensus 117 ~~~a~~~~~~~~gw~~vaii~d~~~-g~~~~~~~~~~~~~~g~~v 160 (389)
T 3o21_A 117 LKGAILSLLSYYKWEKFVYLYDTER-GFSVLQAIMEAAVQNNWQV 160 (389)
T ss_dssp SHHHHHHHHHHHTCCEEEEEECSTT-CSHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHhCCCCEEEEEEcCcH-HHHHHHHHHHHhhcCCCeE
Confidence 4566666666778887654321222 3567889999999999864
No 234
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*
Probab=26.15 E-value=74 Score=25.29 Aligned_cols=52 Identities=15% Similarity=0.139 Sum_probs=35.5
Q ss_pred CCHHHHHHHHHHHH-HHHhhCCCCEEEEecCCC---------------cchhhHHHHHHHHHHHcCccc
Q 033657 61 RDVAAASKIGKILG-ERLLLKDIPAVTVFLKRE---------------QRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 61 ~n~~Aa~~vG~~la-~R~~e~gI~~v~~d~r~~---------------~~yhGrV~a~~~~lre~Gl~~ 113 (114)
-|.+........++ .-+++.|++-+++|+ |= .++-+-++++++-+++.|++|
T Consensus 26 ~~e~~i~~~ad~~~~~gl~~~G~~~~~iDd-gW~~~~~d~~G~~~~~~~kFP~Gl~~l~~~i~~~Glk~ 93 (417)
T 1szn_A 26 IDESKFLSAAELIVSSGLLDAGYNYVNIDD-CWSMKDGRVDGHIAPNATRFPDGIDGLAKKVHALGLKL 93 (417)
T ss_dssp CCHHHHHHHHHHHHHTTHHHHTCCEEECCS-SCBCTTCCBTTBCCBCTTTCTTHHHHHHHHHHHTTCEE
T ss_pred CCHHHHHHHHHHHHHcCchhhCCCEEEECC-CccCCCCCCCCCEEECcccCCcCHHHHHHHHHHcCCEE
Confidence 35555555544442 234678999999996 31 124345999999999999987
No 235
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=26.15 E-value=30 Score=27.81 Aligned_cols=38 Identities=11% Similarity=-0.000 Sum_probs=27.3
Q ss_pred HHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCccc
Q 033657 69 IGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 69 vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
+++.|++.+.+.||+.+.--+ ++.+..|++++. .+|++
T Consensus 4 ~a~~l~~~L~~~GV~~vfg~P------G~~~~~l~~al~-~~i~~ 41 (528)
T 1q6z_A 4 VHGTTYELLRRQGIDTVFGNP------GSNALPFLKDFP-EDFRY 41 (528)
T ss_dssp HHHHHHHHHHHTTCCEEEECC------CGGGHHHHTTCC-TTCEE
T ss_pred HHHHHHHHHHHCCCCEEEECC------CcchHHHHHHHh-hcCcE
Confidence 678999999999999985432 345666777773 45554
No 236
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=25.93 E-value=1.2e+02 Score=23.28 Aligned_cols=51 Identities=14% Similarity=0.169 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHhhCCCCE----EEEecCCCcc-------hhhHHHHHHHHHHHcCcccC
Q 033657 64 AAASKIGKILGERLLLKDIPA----VTVFLKREQR-------YHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 64 ~Aa~~vG~~la~R~~e~gI~~----v~~d~r~~~~-------yhGrV~a~~~~lre~Gl~~~ 114 (114)
-++.+++..++..+.+.|+.. |.+..++... ...-...+.+.+++.||+++
T Consensus 165 G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~~~~~~~~~~~l~~~gI~~~ 226 (437)
T 3sx6_A 165 GPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIEAY 226 (437)
T ss_dssp HHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCCTTHHHHHHHHHHHTTCEEE
T ss_pred cHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccccCcchHHHHHHHHHHHHCCCEEE
Confidence 344667777888888888752 5554344422 12235567788899999863
No 237
>3gza_A Putative alpha-L-fucosidase; NP_812709.1, structural genomic center for structural genomics, JCSG; HET: MSE EPE; 1.60A {Bacteroides thetaiotaomicron vpi-5482}
Probab=25.70 E-value=1e+02 Score=24.99 Aligned_cols=43 Identities=9% Similarity=0.081 Sum_probs=31.6
Q ss_pred HHHHHHHhhCCCCEEEEecC------------CCc-----ch----hhHHHHHHHHHHHcCccc
Q 033657 71 KILGERLLLKDIPAVTVFLK------------REQ-----RY----HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 71 ~~la~R~~e~gI~~v~~d~r------------~~~-----~y----hGrV~a~~~~lre~Gl~~ 113 (114)
...|+.++++|.+-+++.-+ +.+ .+ .--|+.+++++|+.||+|
T Consensus 62 ~~w~~~~k~aGaky~v~t~kHHdGf~lw~s~~t~~~~~~sp~~~~~~D~v~e~~~A~r~~gl~~ 125 (443)
T 3gza_A 62 DQWVQAAKAAGCKFAVLTATHETGFGLWQSDVNPYCLKAVKWRDGKGDIVRDFVNSCRKYGLQP 125 (443)
T ss_dssp HHHHHHHHTTTCSEEEEESCCSSCCBSSCCSSCSSBGGGSSGGGGTCCHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHcCCCEEEEeeEeCCCcccCCCCCCCcccccCCccCCCcCHHHHHHHHHHHcCCeE
Confidence 45688899999999987531 011 11 235999999999999986
No 238
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=25.67 E-value=1.4e+02 Score=21.79 Aligned_cols=25 Identities=16% Similarity=0.192 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCC
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKRE 92 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~ 92 (114)
-.+|..+++.+++.|.+-..++ |+.
T Consensus 20 G~iG~~l~~~L~~~g~~V~~l~-R~~ 44 (346)
T 3i6i_A 20 GFIGQFVATASLDAHRPTYILA-RPG 44 (346)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEE-CSS
T ss_pred cHHHHHHHHHHHHCCCCEEEEE-CCC
Confidence 4789999999999996655566 554
No 239
>4ad1_A Glycosyl hydrolase family 71; glycoside hydrolase GH99, CAZY, enzyme-carbohydra interaction, mannose glycosidase inhibition; 1.90A {Bacteroides xylanisolvens} PDB: 4ad2_A* 4ad3_A* 4ad4_A* 4ad5_A*
Probab=25.64 E-value=55 Score=25.83 Aligned_cols=39 Identities=8% Similarity=0.200 Sum_probs=29.2
Q ss_pred HHHHhhCCCCEEEEecCCC-cc-hh-hHHHHHHHHHHHcCccc
Q 033657 74 GERLLLKDIPAVTVFLKRE-QR-YH-GKVKAVIDSLREAGVKL 113 (114)
Q Consensus 74 a~R~~e~gI~~v~~d~r~~-~~-yh-GrV~a~~~~lre~Gl~~ 113 (114)
.+.|+++||+-+.++. .+ .. .. ..+..+++++.+.|++|
T Consensus 110 ~~~Ak~aGIDgf~l~w-~~~~~~~d~~~l~~~l~aA~~~~~k~ 151 (380)
T 4ad1_A 110 MDMFVMARTGVLALTW-WNEQDETEAKRIGLILDAADKKKIKV 151 (380)
T ss_dssp HHHHHHHTEEEEEEEE-CCCCSHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHcCCCEEEEEe-cCCCCcccHHHHHHHHHHHHHcCCeE
Confidence 5667888999998884 32 22 23 67888999999999876
No 240
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=25.54 E-value=1.2e+02 Score=23.50 Aligned_cols=48 Identities=8% Similarity=0.022 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCccc
Q 033657 63 VAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 63 ~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
.+..+......++.++..|++.+. |. + ....+-+.++++++++.|+.+
T Consensus 113 ~e~~~~~~~~~~~~~l~~GvTtv~-~~-~-~~~~~~~~~~~~~~~~~g~r~ 160 (475)
T 2ood_A 113 RNYAREGVKRFLDALLAAGTTTCQ-AF-T-SSSPVATEELFEEASRRNMRV 160 (475)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEEEE-EE-C-CSSHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHHHHHhcCceEEE-Ee-c-ccCchhHHHHHHHHHHcCCeE
Confidence 444555567778899999999984 64 2 233456788889999988753
No 241
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=25.49 E-value=1.3e+02 Score=21.56 Aligned_cols=40 Identities=20% Similarity=0.383 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcC
Q 033657 66 ASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAG 110 (114)
Q Consensus 66 a~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~G 110 (114)
+.-+|+-+|+++.+.|..-+..+ |+ ..+...+++.+++.|
T Consensus 13 s~GIG~aia~~la~~G~~V~~~~-r~----~~~~~~~~~~l~~~~ 52 (264)
T 3tfo_A 13 SGGIGEGIARELGVAGAKILLGA-RR----QARIEAIATEIRDAG 52 (264)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEE-SS----HHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHCCCEEEEEE-CC----HHHHHHHHHHHHhcC
Confidence 34689999999999998755555 44 334555555555544
No 242
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=25.49 E-value=75 Score=27.00 Aligned_cols=43 Identities=12% Similarity=0.213 Sum_probs=32.9
Q ss_pred HHHHHHhhCCCCEEEEec--------CCCcchhh--HHHHHHHHHHHcCcccC
Q 033657 72 ILGERLLLKDIPAVTVFL--------KREQRYHG--KVKAVIDSLREAGVKLL 114 (114)
Q Consensus 72 ~la~R~~e~gI~~v~~d~--------r~~~~yhG--rV~a~~~~lre~Gl~~~ 114 (114)
-..++++++|+..|.+.. +|.|-+.| -+..|++.+++.||.+|
T Consensus 36 d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~dL~~fl~~a~~~Gl~Vi 88 (595)
T 4e8d_A 36 HSLYNLKALGFNTVETYVAWNLHEPCEGEFHFEGDLDLEKFLQIAQDLGLYAI 88 (595)
T ss_dssp HHHHHHHHTTCCEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHcCCCEEEEeccHHHcCCCCCeecccchhhHHHHHHHHHHcCCEEE
Confidence 457889999999987732 24455555 39999999999999764
No 243
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=25.46 E-value=1e+02 Score=22.15 Aligned_cols=15 Identities=13% Similarity=0.054 Sum_probs=7.1
Q ss_pred HHHHHHHHHhhCCCC
Q 033657 69 IGKILGERLLLKDIP 83 (114)
Q Consensus 69 vG~~la~R~~e~gI~ 83 (114)
.-+.+.+.|.+.|+.
T Consensus 133 ~~~~v~~~~~~~g~~ 147 (273)
T 2qjg_A 133 DLGMIAETCEYWGMP 147 (273)
T ss_dssp HHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHcCCC
Confidence 334444445555554
No 244
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=25.27 E-value=76 Score=23.69 Aligned_cols=41 Identities=20% Similarity=0.069 Sum_probs=29.8
Q ss_pred HHHHHHhhCCCCEEEEecCCC----------cchhhHHHHHHHHHHHcCccc
Q 033657 72 ILGERLLLKDIPAVTVFLKRE----------QRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 72 ~la~R~~e~gI~~v~~d~r~~----------~~yhGrV~a~~~~lre~Gl~~ 113 (114)
-.+++..+.|..-|.+.+ +. ...-.||+++.++.++.|+.|
T Consensus 97 ~~~~~l~~aGa~gv~iEd-~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~ 147 (255)
T 2qiw_A 97 DLIAQILEAGAVGINVED-VVHSEGKRVREAQEHADYIAAARQAADVAGVDV 147 (255)
T ss_dssp HHHHHHHHTTCCEEEECS-EEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHcCCcEEEECC-CCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCe
Confidence 334555568999998875 31 135679999999988888875
No 245
>1n13_A PVLARGDC, pyruvoyl-dependent arginine decarboxylase beta chain; pyruvoyl group, pyruvate, agmatine, lyase; 1.40A {Methanocaldococcus jannaschii} SCOP: d.155.1.2 PDB: 1mt1_A 2qqc_A 2qqd_A
Probab=25.21 E-value=46 Score=19.50 Aligned_cols=17 Identities=24% Similarity=0.294 Sum_probs=14.8
Q ss_pred hhHHHHHHHHHHHcCcc
Q 033657 96 HGKVKAVIDSLREAGVK 112 (114)
Q Consensus 96 hGrV~a~~~~lre~Gl~ 112 (114)
.-+..||=.+|+++||.
T Consensus 28 ~t~L~sFd~AL~dAgI~ 44 (52)
T 1n13_A 28 ETPLNAFDGALLNAGIG 44 (52)
T ss_dssp SSHHHHHHHHHHHHTCT
T ss_pred CchHHHHHHHHHHCCCc
Confidence 45799999999999985
No 246
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=25.12 E-value=1.4e+02 Score=20.57 Aligned_cols=40 Identities=20% Similarity=0.272 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcC
Q 033657 66 ASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAG 110 (114)
Q Consensus 66 a~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~G 110 (114)
+.-+|+-+|+++.+.|.+-+.++ |+ ..+...+.+.+++.|
T Consensus 23 s~gIG~~ia~~l~~~G~~V~~~~-r~----~~~~~~~~~~~~~~~ 62 (247)
T 3i1j_A 23 ARGIGAAAARAYAAHGASVVLLG-RT----EASLAEVSDQIKSAG 62 (247)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEE-SC----HHHHHHHHHHHHHTT
T ss_pred CChHHHHHHHHHHHCCCEEEEEe-cC----HHHHHHHHHHHHhcC
Confidence 35789999999999998655555 44 234445555554443
No 247
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=25.09 E-value=1.1e+02 Score=22.07 Aligned_cols=43 Identities=21% Similarity=0.317 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCcc---hhhHHHHHHHHHHHcC
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQR---YHGKVKAVIDSLREAG 110 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~~---yhGrV~a~~~~lre~G 110 (114)
.-+|+-+|+++.+.|.+-+.++ |+... ..+.++..++.+.+.|
T Consensus 19 ~GIG~aia~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~ 64 (285)
T 3sc4_A 19 RGIGLAIAKRVAADGANVALVA-KSAEPHPKLPGTIYTAAKEIEEAG 64 (285)
T ss_dssp SHHHHHHHHHHHTTTCEEEEEE-SCCSCCSSSCCCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHCCCEEEEEE-CChhhhhhhhHHHHHHHHHHHhcC
Confidence 4689999999999998665556 55432 1224455555554444
No 248
>1np7_A DNA photolyase; protein with FAD cofactor; HET: DNA FAD; 1.90A {Synechocystis SP} SCOP: a.99.1.1 c.28.1.1
Probab=25.09 E-value=78 Score=25.43 Aligned_cols=42 Identities=5% Similarity=0.056 Sum_probs=29.8
Q ss_pred HHHHHHHhhCCCCEEEEecCCCcch-hhHHHHHHHHHHHcCccc
Q 033657 71 KILGERLLLKDIPAVTVFLKREQRY-HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 71 ~~la~R~~e~gI~~v~~d~r~~~~y-hGrV~a~~~~lre~Gl~~ 113 (114)
.+|.+-|.+.|++.|+++. ....+ .-+-+++.+.+.+.||.+
T Consensus 90 ~~l~~l~~~~~~~~V~~~~-~~~~~~~~rd~~v~~~l~~~gi~~ 132 (489)
T 1np7_A 90 QVIPQIAKQINAKTIYYHR-EVTQEELDVERNLVKQLTILGIEA 132 (489)
T ss_dssp HHHHHHHHHTTEEEEEEEC-CCSHHHHHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHcCCCEEEEec-ccCHHHHHHHHHHHHHHHhcCCeE
Confidence 5566777888999998873 33222 346778888888888875
No 249
>3hsy_A Glutamate receptor 2; ligand-gated ION channel, synapse, cell CELL membrane, endoplasmic reticulum, glycoprotein, ION TRA ionic channel; HET: NAG BMA; 1.75A {Rattus norvegicus} PDB: 3h5v_A* 3h5w_A 3o2j_A* 2wjw_A* 2wjx_A 3n6v_A
Probab=25.04 E-value=1.5e+02 Score=21.96 Aligned_cols=44 Identities=16% Similarity=0.114 Sum_probs=31.1
Q ss_pred HHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCccc
Q 033657 69 IGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 69 vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
.+..+++-+...|.+.|.+-. ...--.+..+.|.+.+.+.|+++
T Consensus 108 ~~~a~~~~~~~~gw~~vaii~-d~~~g~~~~~~~~~~~~~~g~~v 151 (376)
T 3hsy_A 108 LKGALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEKKWQV 151 (376)
T ss_dssp CHHHHHHHHHHTTCCEEEEEE-CSTTCSHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHhcCCCEEEEEE-eCchhHHHHHHHHHHhhhcCCeE
Confidence 566777777788999876542 22222567899999999999764
No 250
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=24.90 E-value=1.5e+02 Score=21.18 Aligned_cols=41 Identities=22% Similarity=0.479 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcC
Q 033657 66 ASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAG 110 (114)
Q Consensus 66 a~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~G 110 (114)
+.-+|+-+|+++.+.|..-+..+++ . ..+...+++.+++.|
T Consensus 40 s~GIG~aia~~la~~G~~V~~~~~~-~---~~~~~~~~~~l~~~~ 80 (271)
T 3v2g_A 40 SRGIGAAIAKRLALEGAAVALTYVN-A---AERAQAVVSEIEQAG 80 (271)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEESS-C---HHHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHHCCCEEEEEeCC-C---HHHHHHHHHHHHhcC
Confidence 4568999999999999876655532 2 234555555555544
No 251
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=24.89 E-value=1.4e+02 Score=21.79 Aligned_cols=40 Identities=20% Similarity=0.218 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcC
Q 033657 66 ASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAG 110 (114)
Q Consensus 66 a~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~G 110 (114)
+.-+|+.+|+++.+.|..-+..+ |+ ..+...+++.+++.|
T Consensus 40 s~gIG~~la~~l~~~G~~V~~~~-r~----~~~~~~~~~~l~~~~ 79 (301)
T 3tjr_A 40 ASGIGLATATEFARRGARLVLSD-VD----QPALEQAVNGLRGQG 79 (301)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEE-SC----HHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHCCCEEEEEE-CC----HHHHHHHHHHHHhcC
Confidence 35799999999999997655555 44 234555555555544
No 252
>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal COMP isomerase; 2.00A {Pyrococcus horikoshii}
Probab=24.55 E-value=2.4e+02 Score=22.22 Aligned_cols=58 Identities=28% Similarity=0.291 Sum_probs=39.7
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHhhCCC--CEEEEecCCCcchhhH--HHHHHHHHHHcCccc
Q 033657 54 RSSIGCTRDVAAASKIGKILGERLLLKDI--PAVTVFLKREQRYHGK--VKAVIDSLREAGVKL 113 (114)
Q Consensus 54 k~~l~~~~n~~Aa~~vG~~la~R~~e~gI--~~v~~d~r~~~~yhGr--V~a~~~~lre~Gl~~ 113 (114)
++..+..-|.+.+..+|.-+|.-+.+.+- ..|++=. ..+++|. -.+++.++..+|+++
T Consensus 11 RG~~~~~lt~~~v~~~~~a~~~~l~~~~~~~~~VvIG~--D~R~ss~~l~~a~~~gl~~~G~~V 72 (455)
T 1wqa_A 11 RGIANEKITPEFAMKIGMAFGTLLKREGRKKPLVVVGR--DTRVSGEMLKEALISGLLSVGCDV 72 (455)
T ss_dssp EEEBTTTBCHHHHHHHHHHHHHHHHHTTCSSCEEEEEE--CSCTTHHHHHHHHHHHHHHTTCEE
T ss_pred eeecCCCcCHHHHHHHHHHHHHHHHhcCCCCCeEEEEe--CCCcCHHHHHHHHHHHHHHcCCeE
Confidence 44444446888999999999998877542 2354431 3344554 578999999999875
No 253
>2zko_A NS1, NS1A, non-structural protein 1; dsRNA, protein-RNA interaction; 1.70A {Influenza a virus} PDB: 2z0a_A 1ns1_A 1ail_A 3m8a_A
Probab=24.53 E-value=73 Score=19.59 Aligned_cols=20 Identities=35% Similarity=0.522 Sum_probs=17.5
Q ss_pred CCCHHHHHHHHHHHHHHHhh
Q 033657 60 TRDVAAASKIGKILGERLLL 79 (114)
Q Consensus 60 ~~n~~Aa~~vG~~la~R~~e 79 (114)
+-|++.|...|+.+.+|.++
T Consensus 54 gldie~at~~GkqIveril~ 73 (73)
T 2zko_A 54 GLDIETATRAGKQIVERILK 73 (73)
T ss_dssp TCCHHHHHHHHHHHHHHHHC
T ss_pred ccchHHHHHHHHHHHHHHhC
Confidence 45999999999999999864
No 254
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=24.51 E-value=1.6e+02 Score=20.87 Aligned_cols=40 Identities=13% Similarity=0.145 Sum_probs=28.4
Q ss_pred HHHHhhCCCCEEEEecCCCc------c-hhhHHHHHHHHHHHcCccc
Q 033657 74 GERLLLKDIPAVTVFLKREQ------R-YHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 74 a~R~~e~gI~~v~~d~r~~~------~-yhGrV~a~~~~lre~Gl~~ 113 (114)
.+.+.+.|++.|.+...... . -...++.+.+.+++.||.+
T Consensus 36 l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i 82 (295)
T 3cqj_A 36 LQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRV 82 (295)
T ss_dssp HHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEE
T ss_pred HHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeE
Confidence 56677899999887642211 0 1356889999999999975
No 255
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=24.48 E-value=1.5e+02 Score=19.27 Aligned_cols=45 Identities=9% Similarity=0.028 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCCcch------------------hhHHHHHHHHHHHcCccc
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKREQRY------------------HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~~~y------------------hGrV~a~~~~lre~Gl~~ 113 (114)
..|-.+|..+.+.|.+-..++. +.... ..-...+.+.+++.|+++
T Consensus 11 ~~Gl~~A~~l~~~g~~v~lie~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v 73 (180)
T 2ywl_A 11 PSGLSAALFLARAGLKVLVLDG-GRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEV 73 (180)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEC-SCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHCCCcEEEEeC-CCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEE
Confidence 3566677777778988777774 43111 223567777888888876
No 256
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=24.30 E-value=1.6e+02 Score=20.83 Aligned_cols=41 Identities=15% Similarity=0.229 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcC
Q 033657 66 ASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAG 110 (114)
Q Consensus 66 a~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~G 110 (114)
+.-+|+-+|+++.+.|.+-+..+.+ . ......+.+.+++.|
T Consensus 27 s~gIG~aia~~l~~~G~~V~~~~~~-~---~~~~~~~~~~~~~~~ 67 (270)
T 3is3_A 27 GRGIGAAVAVHLGRLGAKVVVNYAN-S---TKDAEKVVSEIKALG 67 (270)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEESS-C---HHHHHHHHHHHHHTT
T ss_pred CchHHHHHHHHHHHCCCEEEEEcCC-C---HHHHHHHHHHHHhcC
Confidence 3568999999999999866555632 2 233445555555544
No 257
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=24.27 E-value=1.5e+02 Score=25.26 Aligned_cols=40 Identities=13% Similarity=0.134 Sum_probs=33.7
Q ss_pred CCCCcEEEEEEeCCceEEEEEeCCCCeEEEEEechhHhhh
Q 033657 15 FLKPYVLRMHFTNKYVSAQVIHSPTATVASSATSQEKALR 54 (114)
Q Consensus 15 ~~~~~RL~V~~Snkhi~Aqvid~~~~~~lasaST~e~~~k 54 (114)
..+.|=|-|-.--..|.++++|-.+|++|+++|+....+.
T Consensus 203 ~~~~~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~NpQ~~ 242 (631)
T 3zyy_X 203 SQRVFGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNKQAA 242 (631)
T ss_dssp CCCCEEEEEEECSSEEEEEEEETTTCCEEEEEEEECGGGG
T ss_pred CCCceEEEEEecccceeEEEEECCCCCEEEeecccCCCCC
Confidence 3456678888888899999999999999999999887654
No 258
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=24.24 E-value=82 Score=23.14 Aligned_cols=41 Identities=17% Similarity=0.117 Sum_probs=28.8
Q ss_pred HHHHHhhCCCCEEEEecCC---Ccchhh--------HHHHHHHHHHHcCccc
Q 033657 73 LGERLLLKDIPAVTVFLKR---EQRYHG--------KVKAVIDSLREAGVKL 113 (114)
Q Consensus 73 la~R~~e~gI~~v~~d~r~---~~~yhG--------rV~a~~~~lre~Gl~~ 113 (114)
..+++.+.|++.|.+.... +..++- .++.+.+.+++.||.+
T Consensus 41 ~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i 92 (305)
T 3obe_A 41 GLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDAGLRI 92 (305)
T ss_dssp HHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHCCCeE
Confidence 4567888999999876321 111111 6889999999999975
No 259
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=24.21 E-value=1.5e+02 Score=21.31 Aligned_cols=40 Identities=15% Similarity=0.274 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcC
Q 033657 66 ASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAG 110 (114)
Q Consensus 66 a~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~G 110 (114)
+.-+|+-+|+++.+.|..-+.++ |.. .+...+.+.+.+.|
T Consensus 37 s~GIG~aia~~la~~G~~V~~~~-r~~----~~~~~~~~~~~~~~ 76 (270)
T 3ftp_A 37 SRGIGRAIALELARRGAMVIGTA-TTE----AGAEGIGAAFKQAG 76 (270)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEE-SSH----HHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHCCCEEEEEe-CCH----HHHHHHHHHHHhcC
Confidence 35789999999999998655555 432 33444455554444
No 260
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=24.21 E-value=1.7e+02 Score=21.22 Aligned_cols=44 Identities=11% Similarity=0.106 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHhhCCCCEEEEecCCCc--------chhhHHHHHHHHHHHcC
Q 033657 66 ASKIGKILGERLLLKDIPAVTVFLKREQ--------RYHGKVKAVIDSLREAG 110 (114)
Q Consensus 66 a~~vG~~la~R~~e~gI~~v~~d~r~~~--------~yhGrV~a~~~~lre~G 110 (114)
+.-+|+-+|+++.+.|.+-+.+| |+.. +...+....++.+.+.|
T Consensus 37 s~GIG~aia~~la~~G~~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (299)
T 3t7c_A 37 ARGQGRSHAITLAREGADIIAID-VCKQLDGVKLPMSTPDDLAETVRQVEALG 88 (299)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEE-CCSCCTTCCSCCCCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHCCCEEEEEe-cccccccccccccCHHHHHHHHHHHHhcC
Confidence 34689999999999998877777 4421 12344555555555544
No 261
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=24.10 E-value=1.3e+02 Score=21.27 Aligned_cols=39 Identities=13% Similarity=0.281 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcC
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAG 110 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~G 110 (114)
.-+|+-+|+++.+.|.+=+.+| |+. .+.+.+++.+++.|
T Consensus 17 ~GIG~aia~~l~~~G~~V~~~~-r~~----~~~~~~~~~~~~~~ 55 (252)
T 3h7a_A 17 DYIGAEIAKKFAAEGFTVFAGR-RNG----EKLAPLVAEIEAAG 55 (252)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE-SSG----GGGHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHCCCEEEEEe-CCH----HHHHHHHHHHHhcC
Confidence 3689999999999998655555 543 23444444444433
No 262
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=24.10 E-value=1.6e+02 Score=20.38 Aligned_cols=25 Identities=16% Similarity=-0.005 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHhhCCCCEEEEecCC
Q 033657 66 ASKIGKILGERLLLKDIPAVTVFLKR 91 (114)
Q Consensus 66 a~~vG~~la~R~~e~gI~~v~~d~r~ 91 (114)
+.-+|+.+++++.+.|.+-+.++ |+
T Consensus 22 sggiG~~la~~l~~~G~~V~~~~-r~ 46 (260)
T 3awd_A 22 AQNIGLACVTALAEAGARVIIAD-LD 46 (260)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEE-SC
T ss_pred CchHHHHHHHHHHHCCCEEEEEe-CC
Confidence 35789999999999997655555 44
No 263
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=24.07 E-value=1.8e+02 Score=20.66 Aligned_cols=25 Identities=12% Similarity=0.004 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHhhCCCCEEEEecCC
Q 033657 66 ASKIGKILGERLLLKDIPAVTVFLKR 91 (114)
Q Consensus 66 a~~vG~~la~R~~e~gI~~v~~d~r~ 91 (114)
+.-+|+-+|+++.+.|.+-+.+| |+
T Consensus 19 s~gIG~a~a~~l~~~G~~V~~~~-r~ 43 (281)
T 3s55_A 19 ARGMGRSHAVALAEAGADIAICD-RC 43 (281)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEE-CC
T ss_pred CchHHHHHHHHHHHCCCeEEEEe-CC
Confidence 34689999999999998766666 44
No 264
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics; 2.52A {Thermus thermophilus}
Probab=24.05 E-value=1.5e+02 Score=23.86 Aligned_cols=53 Identities=9% Similarity=0.044 Sum_probs=37.2
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCC-EEEEecCCCcch--hhHHHHHHHHHHHcCccc
Q 033657 59 CTRDVAAASKIGKILGERLLLKDIP-AVTVFLKREQRY--HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 59 ~~~n~~Aa~~vG~~la~R~~e~gI~-~v~~d~r~~~~y--hGrV~a~~~~lre~Gl~~ 113 (114)
..-|.+.+..+|+-+|.-+++.|.. .|++=. ..++ .--..+++.+|..+|+++
T Consensus 38 ~~lt~~~v~~i~~a~~~~l~~~~~~~~VvIG~--D~R~~S~~~~~~~~~gl~a~Gi~V 93 (524)
T 2z0f_A 38 ATFTEAHVLAIAQAIAELRPSFGATGPLFLAK--DTHALSEPAWATALSVFAAHGIEV 93 (524)
T ss_dssp TSSCHHHHHHHHHHHHHHTTTTTCCSCEEEEE--CSCTTHHHHHHHHHHHHHHTTCCE
T ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEe--CCCcchHHHHHHHHHHHHHCCCEE
Confidence 3458889999999999988776642 455431 2222 234577889999999875
No 265
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=23.98 E-value=1.7e+02 Score=20.93 Aligned_cols=40 Identities=18% Similarity=0.328 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcC
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAG 110 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~G 110 (114)
.-+|+.+|+++.+.|.+-+..+ |.. .+....+.+.+++.|
T Consensus 38 ~gIG~aia~~la~~G~~V~~~~-~~~---~~~~~~~~~~~~~~~ 77 (269)
T 4dmm_A 38 RGIGRAIALELAAAGAKVAVNY-ASS---AGAADEVVAAIAAAG 77 (269)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE-SSC---HHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHCCCEEEEEe-CCC---hHHHHHHHHHHHhcC
Confidence 4689999999999997766555 322 234455555554443
No 266
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=23.70 E-value=77 Score=24.28 Aligned_cols=41 Identities=15% Similarity=-0.033 Sum_probs=0.0
Q ss_pred HHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCccc
Q 033657 71 KILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 71 ~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
....++|.++|++.+.++. ....-.....+.+.+++.|+.+
T Consensus 96 ~~~i~~a~~aGvd~v~I~~--~~s~~~~~~~~i~~ak~~G~~v 136 (345)
T 1nvm_A 96 VHDLKNAYQAGARVVRVAT--HCTEADVSKQHIEYARNLGMDT 136 (345)
T ss_dssp HHHHHHHHHHTCCEEEEEE--ETTCGGGGHHHHHHHHHHTCEE
T ss_pred HHHHHHHHhCCcCEEEEEE--eccHHHHHHHHHHHHHHCCCEE
No 267
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=23.66 E-value=1.5e+02 Score=20.25 Aligned_cols=25 Identities=16% Similarity=-0.045 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCC
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKR 91 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~ 91 (114)
.-+|+.+++++.+.|.+-+.+++|+
T Consensus 15 ggiG~~~a~~l~~~G~~V~~~~~r~ 39 (247)
T 2hq1_A 15 RGLGKAIAWKLGNMGANIVLNGSPA 39 (247)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred chHHHHHHHHHHHCCCEEEEEcCcC
Confidence 4689999999999997655554444
No 268
>3i45_A Twin-arginine translocation pathway signal protei; structural genomics; 1.36A {Rhodospirillum rubrum}
Probab=23.60 E-value=1.7e+02 Score=21.46 Aligned_cols=47 Identities=15% Similarity=0.105 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHhhCCCCEEEEecCCCcch-hhHHHHHHHHHHHc--Cccc
Q 033657 66 ASKIGKILGERLLLKDIPAVTVFLKREQRY-HGKVKAVIDSLREA--GVKL 113 (114)
Q Consensus 66 a~~vG~~la~R~~e~gI~~v~~d~r~~~~y-hGrV~a~~~~lre~--Gl~~ 113 (114)
....+..+++-+.+.|.+++.+-. ..+.| .+....|.+.+.+. |+++
T Consensus 126 ~~~~~~~~~~~l~~~g~~~vaii~-~~~~~g~~~~~~~~~~l~~~~~g~~v 175 (387)
T 3i45_A 126 TYMQAAMLAAEAAKLPITRWATIA-PNYEYGQSAVARFKELLLAARPEVTF 175 (387)
T ss_dssp HHHHHHHHHHHHTTSSCCEEEEEC-CSSHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred hHHHHHHHHHHHHHcCCCeEEEEe-CCchHhHHHHHHHHHHHHHhCCCcEE
Confidence 344566777778888999887653 34444 45788999999998 7764
No 269
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=23.49 E-value=1.6e+02 Score=20.83 Aligned_cols=38 Identities=16% Similarity=0.276 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcC
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAG 110 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~G 110 (114)
-+|+.+|+++.+.|.+-+..| |+ ..+...+++.+++.|
T Consensus 22 gIG~aia~~l~~~G~~V~~~~-r~----~~~~~~~~~~~~~~~ 59 (264)
T 3ucx_A 22 ALGTTLARRCAEQGADLVLAA-RT----VERLEDVAKQVTDTG 59 (264)
T ss_dssp THHHHHHHHHHHTTCEEEEEE-SC----HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCcCEEEEEe-CC----HHHHHHHHHHHHhcC
Confidence 488889999988887755555 43 234455555555444
No 270
>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A*
Probab=23.47 E-value=1.2e+02 Score=24.71 Aligned_cols=43 Identities=21% Similarity=0.264 Sum_probs=31.5
Q ss_pred HHHHHHHhhCCCCEEEEecCC--Cc---------------ch----hhHHHHHHHHHHHcCccc
Q 033657 71 KILGERLLLKDIPAVTVFLKR--EQ---------------RY----HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 71 ~~la~R~~e~gI~~v~~d~r~--~~---------------~y----hGrV~a~~~~lre~Gl~~ 113 (114)
...|+.++++|.+-+++.-+- |+ .+ .--|+.|++++|+.||+|
T Consensus 65 ~~W~~~~k~aGakyvvlt~kHHdGF~lw~S~~t~~~v~~~p~~~~krDiv~el~~A~r~~gl~~ 128 (478)
T 3ues_A 65 DQWMDALVAGGMAGVILTCKHHDGFCLWPSRLTRHTVASSPWREGKGDLVREVSESARRHGLKF 128 (478)
T ss_dssp HHHHHHHHHTTCSEEEEEEECTTCCBSSCCTTCSCBGGGSSGGGGTCCHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHcCCCEEEEeEEecCCccccCCCCCCcccccCCccCCCCCHHHHHHHHHHHcCCeE
Confidence 456888999999999874210 11 11 236999999999999986
No 271
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=23.44 E-value=78 Score=24.03 Aligned_cols=50 Identities=12% Similarity=0.066 Sum_probs=25.0
Q ss_pred CHHHHHHHHHHHHHHHhhCCCCEEE------EecC-CCcchhhHHHHHHHHHHHcCcc
Q 033657 62 DVAAASKIGKILGERLLLKDIPAVT------VFLK-REQRYHGKVKAVIDSLREAGVK 112 (114)
Q Consensus 62 n~~Aa~~vG~~la~R~~e~gI~~v~------~d~r-~~~~yhGrV~a~~~~lre~Gl~ 112 (114)
+.+.....-+...+.|++.|+. |. |+.. .+..--..+..+++.+.+.|.+
T Consensus 116 s~~e~l~~~~~~v~~ak~~G~~-v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~ 172 (307)
T 1ydo_A 116 STSESLHILKQVNNDAQKANLT-TRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGIS 172 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCE-EEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHHHHHCCCE-EEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCC
Confidence 4555555555666677777764 21 1100 0111123566666666666654
No 272
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=23.29 E-value=88 Score=22.90 Aligned_cols=41 Identities=7% Similarity=-0.110 Sum_probs=29.3
Q ss_pred HHHHHhhCCCCEEEEecCC-CcchhhHHHHHHHHHHHcCccc
Q 033657 73 LGERLLLKDIPAVTVFLKR-EQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 73 la~R~~e~gI~~v~~d~r~-~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
..+++.+.|++.|.+.... +..+...++.+.+.+.+.||++
T Consensus 34 ~l~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~l~~~GL~v 75 (303)
T 3l23_A 34 NLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDAGLKI 75 (303)
T ss_dssp HHHHHHHTTCCEEEECCEETTEETTEEHHHHHHHHHHTTCEE
T ss_pred HHHHHHHcCCCEEEeccccCcccCCCCHHHHHHHHHHcCCeE
Confidence 4567888999998775211 1123346899999999999975
No 273
>2f7l_A 455AA long hypothetical phospho-sugar mutase; phosphomannomutase, phosphoglucomutase, isomerase; 2.80A {Sulfolobus tokodaii}
Probab=23.26 E-value=2.1e+02 Score=22.62 Aligned_cols=56 Identities=23% Similarity=0.223 Sum_probs=38.8
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEecCCCcchhhH--HHHHHHHHHHcCccc
Q 033657 54 RSSIGCTRDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGK--VKAVIDSLREAGVKL 113 (114)
Q Consensus 54 k~~l~~~~n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGr--V~a~~~~lre~Gl~~ 113 (114)
++..+..-|.+.+..+|.-+|.-+.+. ..|++=. ..+++|. -.+++.++..+|+++
T Consensus 11 RG~~~~~lt~~~v~~~~~a~~~~l~~~--~~VvIG~--D~R~ss~~~~~a~a~gl~~~G~~V 68 (455)
T 2f7l_A 11 RGIVNKELTPELVLKLSKAIGTFFGKN--SKILVGR--DVRAGGDMLVKIVEGGLLSVGVEV 68 (455)
T ss_dssp EEEBTTTBCHHHHHHHHHHHHHHHCTT--CEEEEEE--CSCTTHHHHHHHHHHHHHHTTCEE
T ss_pred eeecCCCcCHHHHHHHHHHHHHHHccC--CeEEEEE--CCCCCHHHHHHHHHHHHHHCCCcE
Confidence 333333458889999999999988663 4555531 3344554 578999999999875
No 274
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=23.23 E-value=1.9e+02 Score=20.35 Aligned_cols=22 Identities=9% Similarity=0.004 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHhhCCCCEEEEe
Q 033657 67 SKIGKILGERLLLKDIPAVTVF 88 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d 88 (114)
.-+|+-+|+++.+.|.+-+.+|
T Consensus 20 ~gIG~~ia~~l~~~G~~V~~~~ 41 (287)
T 3pxx_A 20 RGQGRSHAVKLAEEGADIILFD 41 (287)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred ChHHHHHHHHHHHCCCeEEEEc
Confidence 4689999999999998766666
No 275
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=23.08 E-value=1.2e+02 Score=21.31 Aligned_cols=38 Identities=18% Similarity=0.201 Sum_probs=25.7
Q ss_pred HHHHhhCCCCEEEEecCCCcch------hhHHHHHHHHHHHcCc
Q 033657 74 GERLLLKDIPAVTVFLKREQRY------HGKVKAVIDSLREAGV 111 (114)
Q Consensus 74 a~R~~e~gI~~v~~d~r~~~~y------hGrV~a~~~~lre~Gl 111 (114)
.+.+.+.|++.+.+...+...+ ...++.+.+.+++.||
T Consensus 20 ~~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl 63 (270)
T 3aam_A 20 VEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREASGG 63 (270)
T ss_dssp HHHHHHHTCSCEEEESSCTTCCSCCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEEeCCCCCcCcCCCCCHHHHHHHHHHHHHcCC
Confidence 4667777888776654322211 3568888888988888
No 276
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=23.05 E-value=1.7e+02 Score=20.48 Aligned_cols=39 Identities=28% Similarity=0.349 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcC
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAG 110 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~G 110 (114)
.-+|+.+|+++.+.|.+-+.++ |+. .+...+++.+++.|
T Consensus 17 ~gIG~aia~~l~~~G~~V~~~~-r~~----~~~~~~~~~l~~~~ 55 (247)
T 2jah_A 17 SGIGEATARALAAEGAAVAIAA-RRV----EKLRALGDELTAAG 55 (247)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE-SCH----HHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHCCCEEEEEE-CCH----HHHHHHHHHHHhcC
Confidence 4688888888888887655455 432 33444455444433
No 277
>3tvs_A Cryptochrome-1; circadian clock light entrainment, jetlag, phosphorylation, gene regulation, signaling protein; HET: TPO FAD; 2.30A {Drosophila melanogaster} PDB: 4gu5_A*
Probab=22.66 E-value=80 Score=26.02 Aligned_cols=42 Identities=7% Similarity=0.059 Sum_probs=29.6
Q ss_pred HHHHHHHhhCCCCEEEEecCCCcch-hhHHHHHHHHHHHcCccc
Q 033657 71 KILGERLLLKDIPAVTVFLKREQRY-HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 71 ~~la~R~~e~gI~~v~~d~r~~~~y-hGrV~a~~~~lre~Gl~~ 113 (114)
.+|.+-|.+.|++.|+++ +....+ ..|=+++.+.+++.||.+
T Consensus 89 ~vl~~L~~~~~a~~V~~n-~~~~~~~~~RD~~v~~~l~~~gi~~ 131 (538)
T 3tvs_A 89 YIFRRLHEQVRLHRICIE-QDCEPIWNERDESIRSLCRELNIDF 131 (538)
T ss_dssp HHHHHHHHHHCEEEECEE-CCCCGGGHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHcCCCEEEEc-cCCCHHHHHHHHHHHHHHHhCCceE
Confidence 456666777899999887 333233 345578888899999976
No 278
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=22.62 E-value=1.7e+02 Score=20.31 Aligned_cols=39 Identities=18% Similarity=0.170 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHc
Q 033657 66 ASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREA 109 (114)
Q Consensus 66 a~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~ 109 (114)
+.-+|+-+|+++.+.|.+-+.+| |+. .+...+.+.+.+.
T Consensus 18 s~giG~~~a~~l~~~G~~V~~~~-r~~----~~~~~~~~~~~~~ 56 (253)
T 3qiv_A 18 GGGIGQAYAEALAREGAAVVVAD-INA----EAAEAVAKQIVAD 56 (253)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEE-SCH----HHHHHHHHHHHHT
T ss_pred CChHHHHHHHHHHHCCCEEEEEc-CCH----HHHHHHHHHHHhc
Confidence 35689999999999998755555 432 2344444444443
No 279
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=22.57 E-value=94 Score=21.99 Aligned_cols=37 Identities=8% Similarity=0.064 Sum_probs=27.9
Q ss_pred HHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCccc
Q 033657 73 LGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 73 la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
..+.+.+.|++.|.+.. . +...++.+.+.+.+.||++
T Consensus 28 ~l~~~~~~G~~~vEl~~--~--~~~~~~~~~~~l~~~gl~~ 64 (269)
T 3ngf_A 28 RFRLAAEAGFGGVEFLF--P--YDFDADVIARELKQHNLTQ 64 (269)
T ss_dssp HHHHHHHTTCSEEECSC--C--TTSCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHcCCCEEEecC--C--ccCCHHHHHHHHHHcCCcE
Confidence 45677889999987752 2 2335889999999999975
No 280
>1u3d_A Cryptochrome 1 apoprotein; photolyase, AMPPNP, signaling protein; HET: FAD ANP NDS; 2.45A {Arabidopsis thaliana} SCOP: a.99.1.1 c.28.1.1 PDB: 1u3c_A*
Probab=22.48 E-value=97 Score=25.04 Aligned_cols=44 Identities=9% Similarity=-0.047 Sum_probs=28.0
Q ss_pred HHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCccc
Q 033657 70 GKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 70 G~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
..+|.+-|.+.|++.|+++..-..-..-+-+++.+.+.+.||.+
T Consensus 90 ~~~l~~l~~~~~~~~V~~~~~~~p~~~~rd~~v~~~l~~~gi~~ 133 (509)
T 1u3d_A 90 VASLLDVVKSTGASQIFFNHLYDPLSLVRDHRAKDVLTAQGIAV 133 (509)
T ss_dssp HHHHHHHHHHHTCCEEEEECCCSHHHHHHHHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHHcCCCEEEEecccCHHHHHHHHHHHHHHHHcCcEE
Confidence 34566677778999988773111222345566677777888865
No 281
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=22.48 E-value=1.5e+02 Score=20.72 Aligned_cols=40 Identities=15% Similarity=0.057 Sum_probs=28.7
Q ss_pred HHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCccc
Q 033657 71 KILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 71 ~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
...++.+.++|.+-+.+..-.+ ..-+..+.+.+++.|++.
T Consensus 73 ~~~~~~~~~aGad~i~vh~~~~---~~~~~~~~~~~~~~g~~~ 112 (218)
T 3jr2_A 73 AILSRMAFEAGADWITVSAAAH---IATIAACKKVADELNGEI 112 (218)
T ss_dssp HHHHHHHHHHTCSEEEEETTSC---HHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHhcCCCEEEEecCCC---HHHHHHHHHHHHHhCCcc
Confidence 3467888999999998875222 123678888888888753
No 282
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=22.29 E-value=1.5e+02 Score=23.16 Aligned_cols=40 Identities=10% Similarity=0.058 Sum_probs=29.3
Q ss_pred HHHHHHhhCCCCEEEEecCCCcchhhH---HHHHHHHHHHcCcc
Q 033657 72 ILGERLLLKDIPAVTVFLKREQRYHGK---VKAVIDSLREAGVK 112 (114)
Q Consensus 72 ~la~R~~e~gI~~v~~d~r~~~~yhGr---V~a~~~~lre~Gl~ 112 (114)
.+.++|++.|++.|=|| -+...|..- .+.+++-+...|+.
T Consensus 89 e~i~~ai~~GFtSVMiD-gS~~p~eENi~~Tk~vv~~ah~~gvs 131 (323)
T 2isw_A 89 ESVKMAIDLGFSSVMID-ASHHPFDENVRITKEVVAYAHARSVS 131 (323)
T ss_dssp HHHHHHHHTTCSEEEEC-CTTSCHHHHHHHHHHHHHHHHTTTCE
T ss_pred HHHHHHHHcCCCeEEec-CCCCCHHHHHHHHHHHHHHHHHcCCe
Confidence 45788999999999888 477777664 45666666666764
No 283
>3fy4_A 6-4 photolyase; DNA repair, clock cryptochrome; HET: MES FAD; 2.70A {Arabidopsis thaliana}
Probab=22.28 E-value=81 Score=26.07 Aligned_cols=43 Identities=19% Similarity=0.174 Sum_probs=30.6
Q ss_pred HHHHHHHHhhCCCCEEEEecCCCcch-hhHHHHHHHHHHHcCccc
Q 033657 70 GKILGERLLLKDIPAVTVFLKREQRY-HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 70 G~~la~R~~e~gI~~v~~d~r~~~~y-hGrV~a~~~~lre~Gl~~ 113 (114)
-.+|.+-|.+.||+.|+++ +....+ ..|-+++.+.+.+.||.+
T Consensus 92 ~~vl~~L~~~~~~~~V~~n-~~~~p~~~~RD~~v~~~l~~~gI~~ 135 (537)
T 3fy4_A 92 GEVLVRCLQEWKVKRLCFE-YDTDPYYQALDVKVKDYASSTGVEV 135 (537)
T ss_dssp HHHHHHHHTTSCEEEEEEC-CCCSHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHcCCCEEEEe-ccccHHHHHHHHHHHHHHHHcCCeE
Confidence 3567778888999999877 332223 345668888888999876
No 284
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=22.25 E-value=1.7e+02 Score=22.41 Aligned_cols=46 Identities=9% Similarity=0.005 Sum_probs=32.9
Q ss_pred HHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 69 IGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 69 vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
+...+.+.+.+.|++-.+|+.-.+..--.-|...++.+++.|.++|
T Consensus 47 ~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~I 92 (386)
T 1rrm_A 47 VVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYL 92 (386)
T ss_dssp HHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCcCEE
Confidence 4555666666789876667642345566789999999999988764
No 285
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=22.17 E-value=1.6e+02 Score=18.86 Aligned_cols=23 Identities=9% Similarity=-0.168 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHhhCCCCEEEEec
Q 033657 67 SKIGKILGERLLLKDIPAVTVFL 89 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~ 89 (114)
-.+|..+++.+.+.|..-+.+|+
T Consensus 12 G~vG~~la~~L~~~g~~V~vid~ 34 (153)
T 1id1_A 12 SILAINTILQLNQRGQNVTVISN 34 (153)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CHHHHHHHHHHHHCCCCEEEEEC
Confidence 36899999999999998888883
No 286
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=22.12 E-value=1.8e+02 Score=20.71 Aligned_cols=40 Identities=23% Similarity=0.278 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcc
Q 033657 63 VAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVK 112 (114)
Q Consensus 63 ~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~ 112 (114)
.++|+.+|+.||+ .|+.=| . |+ .-|-..|..+++.++|-.
T Consensus 44 ~~~A~~lg~~LA~----~G~~vV--s--Gg--~~GiM~aa~~gAl~~GG~ 83 (195)
T 1rcu_A 44 RDICLELGRTLAK----KGYLVF--N--GG--RDGVMELVSQGVREAGGT 83 (195)
T ss_dssp HHHHHHHHHHHHH----TTCEEE--E--CC--SSHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHH----CCCEEE--e--CC--HHHHHHHHHHHHHHcCCc
Confidence 4678888888887 476543 3 43 379999999999998753
No 287
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=22.09 E-value=1.8e+02 Score=20.76 Aligned_cols=23 Identities=17% Similarity=0.166 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHhhCCCCEEEEec
Q 033657 67 SKIGKILGERLLLKDIPAVTVFL 89 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~ 89 (114)
.-+|+.+|+++.+.|.+-+.+|+
T Consensus 21 ~gIG~aia~~la~~G~~V~~~~~ 43 (286)
T 3uve_A 21 RGQGRSHAVRLAQEGADIIAVDI 43 (286)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEEC
T ss_pred chHHHHHHHHHHHCCCeEEEEec
Confidence 46899999999999988776663
No 288
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=22.04 E-value=2e+02 Score=20.40 Aligned_cols=22 Identities=14% Similarity=0.134 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHhhCCCCEEEEe
Q 033657 67 SKIGKILGERLLLKDIPAVTVF 88 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d 88 (114)
.-+|+-+|+++.+.|.+-+.+|
T Consensus 21 ~GIG~a~a~~la~~G~~V~~~~ 42 (277)
T 3tsc_A 21 RGQGRAHAVRMAAEGADIIAVD 42 (277)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred cHHHHHHHHHHHHcCCEEEEEe
Confidence 4689999999999998766666
No 289
>3na5_A Phosphoglucomutase; isomerase, metal binding; HET: BTB; 1.70A {Salmonella enterica subsp} PDB: 3olp_A 2fuv_A*
Probab=22.03 E-value=2.2e+02 Score=23.52 Aligned_cols=52 Identities=15% Similarity=0.159 Sum_probs=36.9
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCC-EEEEecCCCcchhhH--HHHHHHHHHHcCccc
Q 033657 60 TRDVAAASKIGKILGERLLLKDIP-AVTVFLKREQRYHGK--VKAVIDSLREAGVKL 113 (114)
Q Consensus 60 ~~n~~Aa~~vG~~la~R~~e~gI~-~v~~d~r~~~~yhGr--V~a~~~~lre~Gl~~ 113 (114)
.-|.+-+..+|+-+|+-+++.|.. .|++=. ..++.+. .++++++|..+|+++
T Consensus 79 ~ln~~~v~~i~~A~a~~l~~~~~~~~VvVG~--D~R~~S~~~~~~a~~~L~a~Gi~V 133 (570)
T 3na5_A 79 SFNEPHILAIAQAIAEERAKNGITGPCYVGK--DTHALSEPAFISVLEVLAANGVDV 133 (570)
T ss_dssp SSSHHHHHHHHHHHHHHHHHTTCCSCEEEEE--CSSTTHHHHHHHHHHHHHHTTCCE
T ss_pred CCCHHHHHHHHHHHHHHHHHhCCCCeEEEEe--CCCcccHHHHHHHHHHHHHCCCEE
Confidence 357889999999999988887753 454431 2233343 667789999999975
No 290
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=21.93 E-value=1.4e+02 Score=21.14 Aligned_cols=24 Identities=17% Similarity=0.249 Sum_probs=18.0
Q ss_pred HHHHHHHHHHhhCCCCEEEEecCCC
Q 033657 68 KIGKILGERLLLKDIPAVTVFLKRE 92 (114)
Q Consensus 68 ~vG~~la~R~~e~gI~~v~~d~r~~ 92 (114)
.+|..+++.+++.|..-..++ |+.
T Consensus 15 ~iG~~l~~~L~~~g~~V~~l~-R~~ 38 (308)
T 1qyc_A 15 YIGRHVAKASLDLGHPTFLLV-RES 38 (308)
T ss_dssp TTHHHHHHHHHHTTCCEEEEC-CCC
T ss_pred HHHHHHHHHHHhCCCCEEEEE-CCc
Confidence 579999999999996655556 554
No 291
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=21.67 E-value=2e+02 Score=21.12 Aligned_cols=22 Identities=18% Similarity=0.138 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHhhCCCCEEEEe
Q 033657 67 SKIGKILGERLLLKDIPAVTVF 88 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d 88 (114)
.-+|+-+|+++.+.|.+-+.+|
T Consensus 56 ~GIG~aia~~la~~G~~Vv~~~ 77 (317)
T 3oec_A 56 RGQGRTHAVRLAQDGADIVAID 77 (317)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred cHHHHHHHHHHHHCCCeEEEEe
Confidence 4689999999999998877776
No 292
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=21.64 E-value=1.1e+02 Score=24.01 Aligned_cols=23 Identities=26% Similarity=0.384 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHhhCCCCEEEEec
Q 033657 67 SKIGKILGERLLLKDIPAVTVFL 89 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~ 89 (114)
-.+|..+|+.+.+.|+.-+++|.
T Consensus 13 Gr~G~~va~~L~~~g~~vvvId~ 35 (413)
T 3l9w_A 13 GRFGQITGRLLLSSGVKMVVLDH 35 (413)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CHHHHHHHHHHHHCCCCEEEEEC
Confidence 46899999999999999999984
No 293
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=21.63 E-value=84 Score=26.56 Aligned_cols=44 Identities=9% Similarity=0.188 Sum_probs=32.6
Q ss_pred HHHHHHHhhCCCCEEEEec--------CCCcchhh--HHHHHHHHHHHcCcccC
Q 033657 71 KILGERLLLKDIPAVTVFL--------KREQRYHG--KVKAVIDSLREAGVKLL 114 (114)
Q Consensus 71 ~~la~R~~e~gI~~v~~d~--------r~~~~yhG--rV~a~~~~lre~Gl~~~ 114 (114)
+...+++++.|+..|.+.. .|.|-+.| .+..|++.+.+.||.+|
T Consensus 40 ~~dl~~mK~~G~N~Vrt~v~W~~hEP~~G~ydf~gl~~l~~fl~la~e~GL~VI 93 (612)
T 3d3a_A 40 EHRIKMCKALGMNTICLYVFWNFHEPEEGRYDFAGQKDIAAFCRLAQENGMYVI 93 (612)
T ss_dssp HHHHHHHHHHTCCEEEEECCHHHHCSSTTCCCCSGGGCHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHcCCCEEEEcChHHhcCCCCCccChhHHHHHHHHHHHHHHCCCEEE
Confidence 3446888999999987751 23444444 48999999999999864
No 294
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=21.57 E-value=1.4e+02 Score=21.09 Aligned_cols=40 Identities=8% Similarity=0.052 Sum_probs=29.5
Q ss_pred HHHHHhhCCCCEEEEecCCCc--chhhHHHHHHHHHHHcCccc
Q 033657 73 LGERLLLKDIPAVTVFLKREQ--RYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 73 la~R~~e~gI~~v~~d~r~~~--~yhGrV~a~~~~lre~Gl~~ 113 (114)
..+.+.+.|++.|.+.. ... .....++.+.+.+++.||.+
T Consensus 22 ~l~~~~~~G~~~vEl~~-~~~~~~~~~~~~~~~~~l~~~gl~i 63 (294)
T 3vni_A 22 YIEKVAKLGFDILEIAA-SPLPFYSDIQINELKACAHGNGITL 63 (294)
T ss_dssp HHHHHHHHTCSEEEEES-TTGGGCCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHcCCCEEEecC-cccCCcCHHHHHHHHHHHHHcCCeE
Confidence 45667788999998874 221 12457899999999999975
No 295
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=21.54 E-value=2.3e+02 Score=22.87 Aligned_cols=30 Identities=13% Similarity=0.035 Sum_probs=25.2
Q ss_pred CHHHHHHHHHHHHHHHhhCCCCEEEEecCCC
Q 033657 62 DVAAASKIGKILGERLLLKDIPAVTVFLKRE 92 (114)
Q Consensus 62 n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~ 92 (114)
+.+.|-.-++.+.++|.++|++.|-|| .+.
T Consensus 98 ~~~~am~~a~e~i~~aI~aGFtSVMiD-~S~ 127 (420)
T 2fiq_A 98 NVDAAMEKSVELVKAYVRAGFSKIHLD-ASM 127 (420)
T ss_dssp BHHHHHHHHHHHHHHHHHTTCCEEEEC-CCS
T ss_pred chhhhhhhHHHHHHHHHHhCCCEEEEC-CCC
Confidence 457777788899999999999999998 354
No 296
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=21.53 E-value=93 Score=23.86 Aligned_cols=40 Identities=15% Similarity=0.189 Sum_probs=25.6
Q ss_pred HHHHHhhCCCCEEEEecCCCcchh-------------hHHHHHHHHHHHcCccc
Q 033657 73 LGERLLLKDIPAVTVFLKREQRYH-------------GKVKAVIDSLREAGVKL 113 (114)
Q Consensus 73 la~R~~e~gI~~v~~d~r~~~~yh-------------GrV~a~~~~lre~Gl~~ 113 (114)
-.++|.++|++.+.++. ...-.| .++...++.+++.|+.+
T Consensus 101 ~i~~a~~~g~~~v~i~~-~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v 153 (337)
T 3ble_A 101 TVDWIKDSGAKVLNLLT-KGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKI 153 (337)
T ss_dssp HHHHHHHHTCCEEEEEE-ECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred hHHHHHHCCCCEEEEEE-ecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEE
Confidence 46777778888777664 333333 35666677777777653
No 297
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=21.48 E-value=33 Score=24.15 Aligned_cols=21 Identities=10% Similarity=-0.148 Sum_probs=18.0
Q ss_pred HHHHHHhhCCCCEEEEecCCC
Q 033657 72 ILGERLLLKDIPAVTVFLKRE 92 (114)
Q Consensus 72 ~la~R~~e~gI~~v~~d~r~~ 92 (114)
.++++|.+.|++.+.+.|...
T Consensus 22 e~v~~A~~~Gl~~iaiTDH~~ 42 (245)
T 1m65_A 22 DYIAQAKQKGIKLFAITDHGP 42 (245)
T ss_dssp HHHHHHHHHTCCEEEEEEECT
T ss_pred HHHHHHHHCCCCEEEECCCCC
Confidence 678999999999999987654
No 298
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=21.45 E-value=1.4e+02 Score=25.63 Aligned_cols=45 Identities=11% Similarity=0.277 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHh-hCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcc
Q 033657 67 SKIGKILGERLL-LKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVK 112 (114)
Q Consensus 67 ~~vG~~la~R~~-e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~ 112 (114)
.-+|+.+|+.+. +.|...+++..|++.. ....+.+++.+++.|.+
T Consensus 540 ~GlG~aiA~~la~~~Ga~~vvl~~R~~~~-~~~~~~~~~~l~~~G~~ 585 (795)
T 3slk_A 540 GALGAEVARHLVIERGVRNLVLVSRRGPA-ASGAAELVAQLTAYGAE 585 (795)
T ss_dssp SHHHHHHHHHHHHTSSCCEEEEEESSGGG-STTHHHHHHHHHHTTCE
T ss_pred CCcHHHHHHHHHHHcCCcEEEEeccCccc-hHHHHHHHHHHHhcCCc
Confidence 468999999998 8999877776565432 33567788888887754
No 299
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A*
Probab=21.42 E-value=78 Score=28.67 Aligned_cols=43 Identities=16% Similarity=0.295 Sum_probs=33.4
Q ss_pred HHHHHHhhCCCCEEEEec--------CCCcchhh--HHHHHHHHHHHcCcccC
Q 033657 72 ILGERLLLKDIPAVTVFL--------KREQRYHG--KVKAVIDSLREAGVKLL 114 (114)
Q Consensus 72 ~la~R~~e~gI~~v~~d~--------r~~~~yhG--rV~a~~~~lre~Gl~~~ 114 (114)
..-++++++|+.-|.+.. +|.|-+.| -+..|++.++|.||.+|
T Consensus 60 d~l~kmKa~GlNtV~tYV~Wn~hEP~eG~fdFsg~~dL~~fl~la~e~GL~VI 112 (1003)
T 3og2_A 60 DVFHKIKALGFNTVSFYVDWALLEGKPGRFRADGIFSLEPFFEAATKAGIYLL 112 (1003)
T ss_dssp HHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHcCCCEEEEecchhhcCCCCCEecccchhhHHHHHHHHHHcCCEEE
Confidence 457889999999987643 24455666 59999999999999764
No 300
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=21.42 E-value=1.6e+02 Score=21.25 Aligned_cols=41 Identities=10% Similarity=-0.042 Sum_probs=28.6
Q ss_pred HHHHHhhCCCCEEEEecCCCc-ch------hhHHHHHHHHHHHcCccc
Q 033657 73 LGERLLLKDIPAVTVFLKREQ-RY------HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 73 la~R~~e~gI~~v~~d~r~~~-~y------hGrV~a~~~~lre~Gl~~ 113 (114)
..+.+.+.|++.|.+...+.+ .. ...++.+.+.+++.||.+
T Consensus 20 ~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i 67 (340)
T 2zds_A 20 VCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKC 67 (340)
T ss_dssp HHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeE
Confidence 356777889999887632111 11 135789999999999975
No 301
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=21.39 E-value=1.1e+02 Score=23.49 Aligned_cols=39 Identities=10% Similarity=0.140 Sum_probs=27.2
Q ss_pred HHHHHhhCCCCEEEEecCCCcchhh---HHHHHHHHHHHcCcc
Q 033657 73 LGERLLLKDIPAVTVFLKREQRYHG---KVKAVIDSLREAGVK 112 (114)
Q Consensus 73 la~R~~e~gI~~v~~d~r~~~~yhG---rV~a~~~~lre~Gl~ 112 (114)
..++|++.|++.|=|| -+...|.. ..+.+++-+.+.|+.
T Consensus 95 ~i~~ai~~GFtSVMiD-gS~~p~eeNi~~Tk~vv~~ah~~gvs 136 (288)
T 3q94_A 95 KCKEAIDAGFTSVMID-ASHHPFEENVETTKKVVEYAHARNVS 136 (288)
T ss_dssp HHHHHHHHTCSEEEEC-CTTSCHHHHHHHHHHHHHHHHTTTCE
T ss_pred HHHHHHHcCCCeEEEe-CCCCCHHHHHHHHHHHHHHHHHcCCe
Confidence 5678888899988777 46666765 445666666666664
No 302
>1cxq_A Avian sarcoma virus integrase; mixed beta-sheet surrounded by alpha-helices, transferase; HET: EPE; 1.02A {Avian sarcoma virus} SCOP: c.55.3.2 PDB: 1cxu_A* 1czb_A* 1cz9_A* 1asu_A* 1asw_A* 1asv_A 1a5v_A* 1a5w_A* 1a5x_A* 1vsf_A* 1vse_A* 3o4n_A* 1vsm_A 3o4q_A* 1vsd_A* 1vsh_A* 1vsi_A* 1vsj_A* 1vsk_A 1vsl_A
Probab=21.37 E-value=1.7e+02 Score=18.80 Aligned_cols=41 Identities=10% Similarity=0.170 Sum_probs=19.4
Q ss_pred CCCCCCccCCCCCcEEEEEE----eCCceEEEEEeCCCCeEEEEE
Q 033657 6 PVRPPKLSNFLKPYVLRMHF----TNKYVSAQVIHSPTATVASSA 46 (114)
Q Consensus 6 ~~~~~~~~~~~~~~RL~V~~----Snkhi~Aqvid~~~~~~lasa 46 (114)
|.|+|+...-....-+.+.- ..+.....++|+.++.+++..
T Consensus 1 p~r~~~~~~p~~~~~~D~~~~~~~~g~~yl~~~iD~~Sr~i~~~~ 45 (162)
T 1cxq_A 1 PLREGRGLGPLQIWQTDFTLEPRMAPRSWLAVTVDTASSAIVVTQ 45 (162)
T ss_dssp ----CCTTSCCCEEEEEEEECGGGTTSCEEEEEEETTTCCEEEEE
T ss_pred CCCCCCCCCCCCEEEeeeeecccCCCCEEEEEEEEcCCCeEEEEE
Confidence 34555544433333333321 123344577888888887643
No 303
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=21.32 E-value=1.9e+02 Score=20.37 Aligned_cols=40 Identities=23% Similarity=0.248 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcC
Q 033657 66 ASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAG 110 (114)
Q Consensus 66 a~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~G 110 (114)
+.-+|+-+|+++.+.|.+-+.++ |+. .+...+.+.+.+.|
T Consensus 38 s~gIG~~la~~l~~~G~~V~~~~-r~~----~~~~~~~~~~~~~~ 77 (262)
T 3rkr_A 38 SRGIGAAIARKLGSLGARVVLTA-RDV----EKLRAVEREIVAAG 77 (262)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEE-SCH----HHHHHHHHHHHHTT
T ss_pred CChHHHHHHHHHHHCCCEEEEEE-CCH----HHHHHHHHHHHHhC
Confidence 34689999999999998755555 442 34445555554443
No 304
>4f06_A Extracellular ligand-binding receptor; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: MSE PHB; 1.30A {Rhodopseudomonas palustris} PDB: 4evs_A*
Probab=21.31 E-value=1.6e+02 Score=21.61 Aligned_cols=46 Identities=11% Similarity=-0.009 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCcch-hhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQRY-HGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~~y-hGrV~a~~~~lre~Gl~~ 113 (114)
..-+..+++-+++.|.+++.+-. ..+-| .+-..+|.+.+.+.|+++
T Consensus 124 ~~~~~~~~~~~~~~g~k~vaii~-~~~~~g~~~~~~~~~~~~~~g~~v 170 (371)
T 4f06_A 124 FQNTVPAAKVAKQKGATKVAIAV-SDYGPGIDAETAFKKTFEAEGGKV 170 (371)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEE-ESSHHHHHHHHHHHHHHHHTTCEE
T ss_pred hhhhhhhhhhhhhcCceEEEEEc-CCcccchhHHHHHHHHHHhcCCce
Confidence 44566677778889999876542 23333 445788999999999875
No 305
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=21.26 E-value=1.4e+02 Score=21.05 Aligned_cols=39 Identities=21% Similarity=0.309 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcC
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAG 110 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~G 110 (114)
.-+|+-+|+++.+.|.+-+.+| |+. .+...+++.+++.|
T Consensus 22 ~gIG~~ia~~l~~~G~~V~~~~-r~~----~~~~~~~~~~~~~~ 60 (256)
T 3gaf_A 22 AGIGRAIAGTFAKAGASVVVTD-LKS----EGAEAVAAAIRQAG 60 (256)
T ss_dssp SHHHHHHHHHHHHHTCEEEEEE-SSH----HHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHCCCEEEEEe-CCH----HHHHHHHHHHHhcC
Confidence 4688899999988888755555 432 34455555555444
No 306
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=21.22 E-value=1.9e+02 Score=20.56 Aligned_cols=22 Identities=14% Similarity=0.086 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHhhCCCCEEEEe
Q 033657 67 SKIGKILGERLLLKDIPAVTVF 88 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d 88 (114)
.-+|+-+|+++.+.|.+-+.+|
T Consensus 25 ~gIG~a~a~~la~~G~~V~~~~ 46 (280)
T 3pgx_A 25 RGQGRSHAVRLAAEGADIIACD 46 (280)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred cHHHHHHHHHHHHCCCEEEEEe
Confidence 4689999999999998766666
No 307
>3f5o_A Thioesterase superfamily member 2; hotdog fold, hydrolase; HET: UOC COA P6G; 1.70A {Homo sapiens} SCOP: d.38.1.5 PDB: 2f0x_A* 2cy9_A
Probab=21.22 E-value=81 Score=20.42 Aligned_cols=24 Identities=13% Similarity=0.220 Sum_probs=16.3
Q ss_pred eCCceEEEEEeCCCCeEEEEEech
Q 033657 26 TNKYVSAQVIHSPTATVASSATSQ 49 (114)
Q Consensus 26 Snkhi~Aqvid~~~~~~lasaST~ 49 (114)
+.-.+.+.+.|..+|+.+|.++..
T Consensus 112 ~~~~~~~~i~~~~~g~lva~a~~t 135 (148)
T 3f5o_A 112 TLAFTSVDLTNKATGKLIAQGRHT 135 (148)
T ss_dssp SEEEEEEEEEETTTCCEEEEEEEE
T ss_pred eEEEEEEEEEECCCCeEEEEEEEE
Confidence 333556777775578998887654
No 308
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A*
Probab=21.10 E-value=68 Score=26.78 Aligned_cols=48 Identities=21% Similarity=0.142 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHhhCCCCEE-------EEecCCC---cc-hh-------hHHHHHHHHHHHcCc
Q 033657 64 AAASKIGKILGERLLLKDIPAV-------TVFLKRE---QR-YH-------GKVKAVIDSLREAGV 111 (114)
Q Consensus 64 ~Aa~~vG~~la~R~~e~gI~~v-------~~d~r~~---~~-yh-------GrV~a~~~~lre~Gl 111 (114)
+.++.+|+.+|+.+...||+-. .-|+|++ ++ |+ --..|++++++++|+
T Consensus 125 ~La~~~G~~~a~Elra~Gin~~fAPvvDv~r~P~~g~ig~rsfGEDP~lv~~~a~A~v~GlQ~~gV 190 (535)
T 3sql_A 125 ALAETMGATTAQEALSLGINWVLAPVLDVNNNPHNPVINIRAFGETPDQVSALGTAFIRGAQQYAV 190 (535)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEECCCBCCCCCCTTCSSSGGGSSCSSHHHHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHhCCCEEecCeeccCCCCCCCCccccCCCCCHHHHHHHHHHHHHHHhhccc
Confidence 5689999999999999999853 1122333 11 11 145788999998886
No 309
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=21.04 E-value=1.8e+02 Score=20.17 Aligned_cols=41 Identities=7% Similarity=-0.051 Sum_probs=28.4
Q ss_pred HHHHHhhCCCCEEEEecCCC--cc-hhhHHHHHHHHHHHcCccc
Q 033657 73 LGERLLLKDIPAVTVFLKRE--QR-YHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 73 la~R~~e~gI~~v~~d~r~~--~~-yhGrV~a~~~~lre~Gl~~ 113 (114)
..+.+.+.|++.|.+..... +. ....+..+.+.+++.||.+
T Consensus 24 ~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~ 67 (272)
T 2q02_A 24 FFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEI 67 (272)
T ss_dssp HHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeE
Confidence 35677788999888763111 11 2356888999999999875
No 310
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=21.04 E-value=1.6e+02 Score=20.88 Aligned_cols=38 Identities=11% Similarity=0.156 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREA 109 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~ 109 (114)
.-+|+-+|+++.+.|.+-+.+| |+. .+...+++.+++.
T Consensus 20 ~gIG~aia~~l~~~G~~V~~~~-r~~----~~~~~~~~~l~~~ 57 (262)
T 3pk0_A 20 KGIGRGIATVFARAGANVAVAG-RST----ADIDACVADLDQL 57 (262)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE-SCH----HHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHCCCEEEEEe-CCH----HHHHHHHHHHHhh
Confidence 4689999999999998655555 442 3344445444443
No 311
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=21.04 E-value=1.8e+02 Score=21.05 Aligned_cols=26 Identities=15% Similarity=0.202 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHhhCCCCEEEEecCCC
Q 033657 66 ASKIGKILGERLLLKDIPAVTVFLKRE 92 (114)
Q Consensus 66 a~~vG~~la~R~~e~gI~~v~~d~r~~ 92 (114)
+.-+|+.+|+++.+.|.+-+..+ |..
T Consensus 56 s~GIG~aia~~la~~G~~V~~~~-r~~ 81 (291)
T 3ijr_A 56 DSGIGRAVSIAFAKEGANIAIAY-LDE 81 (291)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEE-SSC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEe-CCc
Confidence 34689999999999998766556 443
No 312
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=21.01 E-value=1.9e+02 Score=20.65 Aligned_cols=39 Identities=28% Similarity=0.405 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcC
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAG 110 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~G 110 (114)
.-+|+.+|+++.+.|.+-+.++ |+. .+...+++.+++.|
T Consensus 32 ~gIG~~ia~~l~~~G~~V~~~~-r~~----~~~~~~~~~l~~~~ 70 (277)
T 2rhc_B 32 SGIGLEIARRLGKEGLRVFVCA-RGE----EGLRTTLKELREAG 70 (277)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE-SCH----HHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHCCCEEEEEe-CCH----HHHHHHHHHHHhcC
Confidence 4688899999999887655455 442 23444444444433
No 313
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=20.94 E-value=1.1e+02 Score=20.87 Aligned_cols=26 Identities=23% Similarity=0.273 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHhhCCCCEEEEecCCC
Q 033657 66 ASKIGKILGERLLLKDIPAVTVFLKRE 92 (114)
Q Consensus 66 a~~vG~~la~R~~e~gI~~v~~d~r~~ 92 (114)
.--+|..+++++++.|.+-+.++ |+.
T Consensus 30 tG~iG~~l~~~L~~~G~~V~~~~-R~~ 55 (236)
T 3e8x_A 30 NGKVARYLLSELKNKGHEPVAMV-RNE 55 (236)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEE-SSG
T ss_pred CChHHHHHHHHHHhCCCeEEEEE-CCh
Confidence 35799999999999997655556 554
No 314
>4f11_A Gamma-aminobutyric acid type B receptor subunit 2; venus flytrap module, G-protein coupled receptor, signaling; 2.38A {Homo sapiens} PDB: 4f12_A*
Probab=20.86 E-value=91 Score=23.47 Aligned_cols=47 Identities=11% Similarity=0.111 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~ 113 (114)
...+..+++-+++.|.+.|.+-.....-..+-..+|.+.+.+.|+++
T Consensus 139 ~~~~~~~~~~~~~~g~~~v~ii~~~~~~g~~~~~~~~~~~~~~g~~v 185 (433)
T 4f11_A 139 NAVNPAILKLLKHYQWKRVGTLTQDVQRFSEVRNDLTGVLYGEDIEI 185 (433)
T ss_dssp GGHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHHSSSSSCEE
T ss_pred HHHHHHHHHHHHHcCCcEEEEEEecchhhHHHHHHHHHHHHHcCceE
Confidence 34555566666778999875542222223567888899999999875
No 315
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=20.86 E-value=1e+02 Score=26.52 Aligned_cols=44 Identities=11% Similarity=0.231 Sum_probs=32.9
Q ss_pred HHHHHHHhhCCCCEEEEec--------CCCcchhh--HHHHHHHHHHHcCcccC
Q 033657 71 KILGERLLLKDIPAVTVFL--------KREQRYHG--KVKAVIDSLREAGVKLL 114 (114)
Q Consensus 71 ~~la~R~~e~gI~~v~~d~--------r~~~~yhG--rV~a~~~~lre~Gl~~~ 114 (114)
+...++++++|+..|.+.. +|.|-+.| -+..|++.+++.||.+|
T Consensus 43 ~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~DL~~fl~~a~~~GL~Vi 96 (654)
T 3thd_A 43 KDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYFLRLAHELGLLVI 96 (654)
T ss_dssp HHHHHHHHHTTCSEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHcCCCEEEEEechhhcCCCCCccCccchHHHHHHHHHHHHcCCEEE
Confidence 3457889999999887621 24455555 38999999999999764
No 316
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=20.83 E-value=1.7e+02 Score=20.79 Aligned_cols=25 Identities=16% Similarity=0.177 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHhhCCCCEEEEecCC
Q 033657 66 ASKIGKILGERLLLKDIPAVTVFLKR 91 (114)
Q Consensus 66 a~~vG~~la~R~~e~gI~~v~~d~r~ 91 (114)
+.-+|+.+++++.+.|.+-+.++ |+
T Consensus 37 sggIG~~la~~l~~~G~~V~~~~-r~ 61 (286)
T 1xu9_A 37 SKGIGREMAYHLAKMGAHVVVTA-RS 61 (286)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEE-SC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEE-CC
Confidence 34689999999999997644445 44
No 317
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=20.72 E-value=2.2e+02 Score=21.48 Aligned_cols=45 Identities=11% Similarity=-0.112 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHhhCCCCEEEEecCCCc--chhhHHHHHHHHHHHcCccc
Q 033657 67 SKIGKILGERLLLKDIPAVTVFLKREQ--RYHGKVKAVIDSLREAGVKL 113 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d~r~~~--~yhGrV~a~~~~lre~Gl~~ 113 (114)
.++|.+....|+..+++.|+|- |++ ...+-+++|.+.+...+.++
T Consensus 222 ~~I~~la~~~a~~~~i~~Vvf~--Gg~l~~n~~l~~~l~~~~~~~~~~~ 268 (287)
T 2ews_A 222 EVVTTMAITVAREFKTENIVYI--GSSFHNNALLRKVVEDYTVLRGCKP 268 (287)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEE--SGGGTTCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHhCCCCeEEEe--CCchhcCHHHHHHHHHHHhhCCceE
Confidence 3444444444567999997654 663 33556777777665556554
No 318
>2pfu_A Biopolymer transport EXBD protein; TONB system, proton motive force, periplasmic domain; NMR {Escherichia coli}
Probab=20.49 E-value=1.5e+02 Score=17.82 Aligned_cols=21 Identities=24% Similarity=0.283 Sum_probs=17.9
Q ss_pred CcchhhHHHHHHHHHHHcCcc
Q 033657 92 EQRYHGKVKAVIDSLREAGVK 112 (114)
Q Consensus 92 ~~~yhGrV~a~~~~lre~Gl~ 112 (114)
....+|.|-.+++.++++|+.
T Consensus 66 ~~~~y~~vv~vmd~l~~aG~~ 86 (99)
T 2pfu_A 66 KTVDYETLMKVMDTLHQAGYL 86 (99)
T ss_dssp TTCCHHHHHHHHHHHHHTCCC
T ss_pred CCCCHHHHHHHHHHHHHcCCC
Confidence 455689999999999999984
No 319
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=20.49 E-value=1.5e+02 Score=23.00 Aligned_cols=46 Identities=11% Similarity=0.026 Sum_probs=33.9
Q ss_pred HHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCcccC
Q 033657 69 IGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 69 vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl~~~ 114 (114)
++..+.+.+.+.|++-.+|+.-.+..--.-|...++.+++.|.++|
T Consensus 47 ~~~~v~~~L~~~gi~~~~~~~v~~~p~~~~v~~~~~~~~~~~~D~I 92 (383)
T 3ox4_A 47 VVKQVADLLKAQGINSAVYDGVMPNPTVTAVLEGLKILKDNNSDFV 92 (383)
T ss_dssp HHHHHHHHHHTTTCEEEEEEEECSSCBHHHHHHHHHHHHHHTCSEE
T ss_pred hHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCcCEE
Confidence 4556666677789987777743455666789999999999988764
No 320
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=20.42 E-value=1.2e+02 Score=21.92 Aligned_cols=41 Identities=7% Similarity=0.074 Sum_probs=28.9
Q ss_pred HHHHhhCCCCEEEEecCCC--c--chhhHHHHHHHHHHHcCcccC
Q 033657 74 GERLLLKDIPAVTVFLKRE--Q--RYHGKVKAVIDSLREAGVKLL 114 (114)
Q Consensus 74 a~R~~e~gI~~v~~d~r~~--~--~yhGrV~a~~~~lre~Gl~~~ 114 (114)
.+.+++.|+..|.+....+ + .+-.++..+++.+.+.||.+|
T Consensus 37 ~~~i~~~G~N~VRi~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~Vi 81 (294)
T 2whl_A 37 IPAIAEQGANTIRIVLSDGGQWEKDDIDTIREVIELAEQNKMVAV 81 (294)
T ss_dssp HHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHcCCCEEEEEecCCCccCccHHHHHHHHHHHHHHCCCEEE
Confidence 3456789999887643112 2 234589999999999999764
No 321
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=20.37 E-value=1.9e+02 Score=20.43 Aligned_cols=40 Identities=18% Similarity=0.365 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcC
Q 033657 66 ASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAG 110 (114)
Q Consensus 66 a~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~G 110 (114)
+.-+|+.+++++.+.|.+-+.++ |+. .+...+.+.+++.|
T Consensus 41 sggIG~~la~~l~~~G~~V~~~~-r~~----~~~~~~~~~~~~~~ 80 (279)
T 1xg5_A 41 SGGIGAAVARALVQQGLKVVGCA-RTV----GNIEELAAECKSAG 80 (279)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEE-SCH----HHHHHHHHHHHHTT
T ss_pred CchHHHHHHHHHHHCCCEEEEEE-CCh----HHHHHHHHHHHhcC
Confidence 45789999999999997655555 442 33444455554443
No 322
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=20.27 E-value=2.2e+02 Score=19.72 Aligned_cols=22 Identities=18% Similarity=0.282 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHhhCCCCEEEEe
Q 033657 67 SKIGKILGERLLLKDIPAVTVF 88 (114)
Q Consensus 67 ~~vG~~la~R~~e~gI~~v~~d 88 (114)
.-+|+.+|+++.+.|.+-+..+
T Consensus 14 ~giG~~ia~~l~~~G~~V~~~~ 35 (246)
T 2uvd_A 14 RGIGRAIAIDLAKQGANVVVNY 35 (246)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEE
T ss_pred cHHHHHHHHHHHHCCCEEEEEe
Confidence 4588888888888887655455
No 323
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=20.17 E-value=1.5e+02 Score=21.28 Aligned_cols=40 Identities=15% Similarity=0.299 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcC
Q 033657 66 ASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAG 110 (114)
Q Consensus 66 a~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~G 110 (114)
+.-+|+-+|+++.+.|..-+..| |+ ..+...+++.+++.|
T Consensus 35 s~gIG~aia~~la~~G~~V~~~~-r~----~~~~~~~~~~l~~~~ 74 (271)
T 4ibo_A 35 SRGLGRAMAEGLAVAGARILING-TD----PSRVAQTVQEFRNVG 74 (271)
T ss_dssp SSHHHHHHHHHHHHTTCEEEECC-SC----HHHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHHCCCEEEEEe-CC----HHHHHHHHHHHHhcC
Confidence 34689999999999997544444 43 234555555555544
No 324
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=20.15 E-value=1.8e+02 Score=22.53 Aligned_cols=40 Identities=18% Similarity=0.253 Sum_probs=28.8
Q ss_pred HHHHHHhhCCCCEEEEecCCCcchhh---HHHHHHHHHHHcCcc
Q 033657 72 ILGERLLLKDIPAVTVFLKREQRYHG---KVKAVIDSLREAGVK 112 (114)
Q Consensus 72 ~la~R~~e~gI~~v~~d~r~~~~yhG---rV~a~~~~lre~Gl~ 112 (114)
-..++|.+.|++.|=|| -+...|.. ..+.+++-+.+.|+.
T Consensus 86 e~~~~ai~~GFtSVMiD-gS~~p~eENi~~Tk~vv~~ah~~gvs 128 (305)
T 1rvg_A 86 ESVLRALRAGFTSVMID-KSHEDFETNVRETRRVVEAAHAVGVT 128 (305)
T ss_dssp HHHHHHHHTTCSEEEEC-CTTSCHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHcCCCeeeeC-CCCCCHHHHHHHHHHHHHHHHHcCCE
Confidence 45668889999999888 46677766 445666777777764
No 325
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A
Probab=20.11 E-value=59 Score=28.62 Aligned_cols=51 Identities=16% Similarity=0.218 Sum_probs=35.7
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCCEE---EE----ecCCCc--c-hh-------hHHHHHHHHHHHc
Q 033657 59 CTRDVAAASKIGKILGERLLLKDIPAV---TV----FLKREQ--R-YH-------GKVKAVIDSLREA 109 (114)
Q Consensus 59 ~~~n~~Aa~~vG~~la~R~~e~gI~~v---~~----d~r~~~--~-yh-------GrV~a~~~~lre~ 109 (114)
.+.|.+.++.+|+.+|+.+...||+-. ++ |+|.|- . |+ --..|+.+++++.
T Consensus 132 At~d~~L~~~~g~~ia~E~ra~Gin~~~aPvvDv~rdPr~GR~~EsfGEDP~lv~~~a~A~V~GlQ~~ 199 (822)
T 3rrx_A 132 AARDTDLIKRIGQATAKEVAATGIEWSFAPTVAVVRDDRWGRTYESYSEDPDLVKRYAGEMVTGIQGD 199 (822)
T ss_dssp HHCCHHHHHHHHHHHHHHHHTTTCCEEEEEECCCCSCTTSTTGGGSSCSCHHHHHHHHHHHHHHHHCC
T ss_pred hcCCHHHHHHHHHHHHHHHHhcCCcEeeccccccccCCCcCccccCCCCCHHHHHHHHHHHHHHHhcc
Confidence 457899999999999999999999953 11 333331 1 11 1356788888875
No 326
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=20.09 E-value=2.2e+02 Score=20.46 Aligned_cols=46 Identities=13% Similarity=0.027 Sum_probs=30.4
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCc
Q 033657 61 RDVAAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGV 111 (114)
Q Consensus 61 ~n~~Aa~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl 111 (114)
.+.++++..|. +|..+.+ -.++-|- .+..... |...|.+++++.|+
T Consensus 108 d~~~g~~lag~-la~~l~~--~~~Ig~i-~g~~~~~-r~~Gf~~~~~~~~~ 153 (296)
T 2hqb_A 108 EGYAMGYFGGM-VAASMSE--THKVGVI-AAFPWQP-EVEGFVDGAKYMNE 153 (296)
T ss_dssp CCHHHHHHHHH-HHHHTCS--SSEEEEE-ESCTTCH-HHHHHHHHHHHTTC
T ss_pred chHHHHHHHHH-HHHhhcc--CCeEEEE-cCcCchh-hHHHHHHHHHHhCC
Confidence 46788999986 4444433 3566543 2322223 99999999999986
No 327
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=20.05 E-value=2.4e+02 Score=20.31 Aligned_cols=39 Identities=26% Similarity=0.356 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHhhCCCCEEEEecCCCcchhhHHHHHHHHHHHcCc
Q 033657 64 AAASKIGKILGERLLLKDIPAVTVFLKREQRYHGKVKAVIDSLREAGV 111 (114)
Q Consensus 64 ~Aa~~vG~~la~R~~e~gI~~v~~d~r~~~~yhGrV~a~~~~lre~Gl 111 (114)
++|+.+|+.||++ |+.=| . -|+. .|-..|.++++.++|-
T Consensus 28 ~~A~~lg~~LA~~----g~~lV--~-GGg~--~GlM~aa~~gA~~~GG 66 (216)
T 1ydh_A 28 DAAIELGNELVKR----KIDLV--Y-GGGS--VGLMGLISRRVYEGGL 66 (216)
T ss_dssp HHHHHHHHHHHHT----TCEEE--E-CCCS--SHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHC----CCEEE--E-CCCc--ccHhHHHHHHHHHcCC
Confidence 5677777777764 66543 3 2331 3899999999999874
No 328
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=20.04 E-value=2.2e+02 Score=20.20 Aligned_cols=23 Identities=13% Similarity=0.235 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHhhCCCCEEEEe
Q 033657 66 ASKIGKILGERLLLKDIPAVTVF 88 (114)
Q Consensus 66 a~~vG~~la~R~~e~gI~~v~~d 88 (114)
+.-+|+.+|+++.+.|.+-+..+
T Consensus 38 s~gIG~~ia~~l~~~G~~V~~~~ 60 (283)
T 1g0o_A 38 GRGIGREMAMELGRRGCKVIVNY 60 (283)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CcHHHHHHHHHHHHCCCEEEEEe
Confidence 34689999999999997655555
Done!