BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033664
(114 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FK81|Y5258_ARATH Uncharacterized protein At5g22580 OS=Arabidopsis thaliana
GN=At5g22580 PE=1 SV=1
Length = 111
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 66/104 (63%), Positives = 79/104 (75%)
Query: 8 AMGEFKHLVIVKFKEGVVVEDIVKGMKKLVSEIDAVKSFEWGQDVEGQEMLRQGFTHAFL 67
A FKHLV+VKFKE V++I+KG++ LVS+ID VKSFEWG+D E +MLRQGFTHAF
Sbjct: 2 ATSGFKHLVVVKFKEDTKVDEILKGLENLVSQIDTVKSFEWGEDKESHDMLRQGFTHAFS 61
Query: 68 MTFNKKEDYTTFASHPSHVEFSATFSAAIEKIVLLDFPTVLGKA 111
MTF K+ Y F SHP HVEFSA F+A I+KIVLLDFP K+
Sbjct: 62 MTFENKDGYVAFTSHPLHVEFSAAFTAVIDKIVLLDFPVAAVKS 105
>sp|Q9LUV2|POP3_ARATH Probable protein Pop3 OS=Arabidopsis thaliana GN=At3g17210 PE=1
SV=1
Length = 109
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 6 EAAMGEFKHLVIVKFKEGVV---VEDIVKGMKKLVSEIDAVKSFEWGQDVEGQEMLRQGF 62
E A G KH+++ FK+GV +E+++KG LV+ I+ +K+F WG+DV E L QG+
Sbjct: 2 EEAKGPVKHVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDV-SIENLHQGY 60
Query: 63 THAFLMTFNKKEDYTTFASHPSHVEFSATFSAAIEKIVLLDF-PT 106
TH F TF KE + +HP+HVEF+ F +++K++++D+ PT
Sbjct: 61 THIFESTFESKEAVAEYIAHPAHVEFATIFLGSLDKVLVIDYKPT 105
>sp|I6WU39|OLIAC_CANSA Olivetolic acid cyclase OS=Cannabis sativa GN=OAC PE=1 SV=1
Length = 101
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 13 KHLVIVKFKEGVV---VEDIVKGMKKLVSEIDAVKSFEWGQDVEGQEMLRQGFTHAFLMT 69
KHL+++KFK+ + E+ K LV+ I A+K WG+DV Q+ +G+TH +T
Sbjct: 4 KHLIVLKFKDEITEAQKEEFFKTYVNLVNIIPAMKDVYWGKDV-TQKNKEEGYTHIVEVT 62
Query: 70 FNKKEDYTTFASHPSHVEFSATFSAAIEKIVLLDF 104
F E + HP+HV F + + EK+++ D+
Sbjct: 63 FESVETIQDYIIHPAHVGFGDVYRSFWEKLLIFDY 97
>sp|Q7VVG6|ARLY_BORPE Argininosuccinate lyase OS=Bordetella pertussis (strain Tohama I
/ ATCC BAA-589 / NCTC 13251) GN=argH PE=3 SV=1
Length = 473
Score = 30.8 bits (68), Expect = 2.2, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Query: 28 DIVKGMKKLVSEIDAVKSFEWGQDVE 53
DI +GM++++SEIDA SF+W D+E
Sbjct: 72 DIQRGMQQILSEIDA-GSFQWLLDLE 96
>sp|Q7WAE4|ARLY_BORPA Argininosuccinate lyase OS=Bordetella parapertussis (strain 12822
/ ATCC BAA-587 / NCTC 13253) GN=argH PE=3 SV=2
Length = 473
Score = 30.8 bits (68), Expect = 2.2, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Query: 28 DIVKGMKKLVSEIDAVKSFEWGQDVE 53
DI +GM++++SEIDA SF+W D+E
Sbjct: 72 DIQRGMQQILSEIDA-GSFQWLLDLE 96
>sp|Q7WJI7|ARLY_BORBR Argininosuccinate lyase OS=Bordetella bronchiseptica (strain ATCC
BAA-588 / NCTC 13252 / RB50) GN=argH PE=3 SV=1
Length = 473
Score = 30.8 bits (68), Expect = 2.2, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Query: 28 DIVKGMKKLVSEIDAVKSFEWGQDVE 53
DI +GM++++SEIDA SF+W D+E
Sbjct: 72 DIQRGMQQILSEIDA-GSFQWLLDLE 96
>sp|Q2L1J6|ARLY_BORA1 Argininosuccinate lyase OS=Bordetella avium (strain 197N) GN=argH
PE=3 SV=1
Length = 470
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Query: 28 DIVKGMKKLVSEIDAVKSFEWGQDVE 53
DI +GM++++SEIDA SF+W D+E
Sbjct: 71 DIERGMQQILSEIDA-GSFQWLLDLE 95
>sp|A4FZA5|SYA_METM5 Alanine--tRNA ligase OS=Methanococcus maripaludis (strain C5 / ATCC
BAA-1333) GN=alaS PE=3 SV=1
Length = 892
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 79 FASHPSHVEFSATFSAAIEKIVLLD 103
F HP+ VEF A +EK VLLD
Sbjct: 507 FFKHPTQVEFEAKVLKTVEKYVLLD 531
>sp|P0C6Y4|R1AB_PEDV7 Replicase polyprotein 1ab OS=Porcine epidemic diarrhea virus (strain
CV777) GN=rep PE=3 SV=1
Length = 6781
Score = 29.3 bits (64), Expect = 6.5, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 28/60 (46%)
Query: 30 VKGMKKLVSEIDAVKSFEWGQDVEGQEMLRQGFTHAFLMTFNKKEDYTTFASHPSHVEFS 89
V GM ++ VKS +G+D + ++L FT FNK Y HP+ V+ S
Sbjct: 4338 VMGMTNCLASECFVKSDIFGEDFKSYDLLEYDFTEHKTALFNKYFKYWGLQYHPNCVDCS 4397
>sp|Q972V9|URE23_SULTO Urease subunit gamma/beta OS=Sulfolobus tokodaii (strain DSM
16993 / JCM 10545 / NBRC 100140 / 7) GN=ureAB PE=3 SV=2
Length = 219
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 8 AMGEFKHLVIVKFKEGVVVEDIVKGMKKLVSEIDAV 43
AM ++ K +EGV +EDI+KG ++L++E D +
Sbjct: 35 AMAIIVDYILEKAREGVKMEDIIKGAQELLTENDVM 70
>sp|O74438|MCP2_SCHPO Meiotic coiled-coil protein 2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mcp2 PE=4 SV=1
Length = 703
Score = 28.9 bits (63), Expect = 9.0, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 2 GEGEEAAMGEFKHLVIVKFKEGVVVEDIVKGMKKLVSEIDAVKSFEWGQDVEGQEMLRQG 61
G+ E A+GE LV+ E V +D + +++++ +D + +WG V Q M+ G
Sbjct: 512 GKWHEVAVGENGSLVVQNMFENCVEKDKRECIEEIIFHLDGIARGQWGNWVV-QHMVENG 570
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,658,571
Number of Sequences: 539616
Number of extensions: 1522005
Number of successful extensions: 3695
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 3685
Number of HSP's gapped (non-prelim): 13
length of query: 114
length of database: 191,569,459
effective HSP length: 82
effective length of query: 32
effective length of database: 147,320,947
effective search space: 4714270304
effective search space used: 4714270304
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)