BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033665
MKILSVLKYCVIWRAVERALGPGFCRDKCDVKFVGTPLTHQRFLRRNRGTYGPAIQAGKE
TFPGHSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVSQHSELLDAIRI

High Scoring Gene Products

Symbol, full name Information P value
AT1G57770 protein from Arabidopsis thaliana 1.2e-44
Os03g0841900
FAD dependent oxidoreductase family protein, expressed
protein from Oryza sativa Japonica Group 5.0e-44
CHLREDRAFT_130438
Predicted protein
protein from Chlamydomonas reinhardtii 1.6e-28
CHLREDRAFT_176572
Predicted protein
protein from Chlamydomonas reinhardtii 3.8e-22
Os11g0572700
Os11g0572700 protein
protein from Oryza sativa Japonica Group 1.6e-14
CRTISO
AT1G06820
protein from Arabidopsis thaliana 6.5e-13
CHLREDRAFT_196597
Carotenoid isomerase
protein from Chlamydomonas reinhardtii 4.1e-11

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033665
        (114 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2009395 - symbol:AT1G57770 species:3702 "Arabi...   470  1.2e-44   1
UNIPROTKB|Q10AT7 - symbol:Os03g0841900 "Os03g0841900 prot...   464  5.0e-44   1
UNIPROTKB|A8J3K3 - symbol:CHLREDRAFT_130438 "Predicted pr...   323  1.6e-28   1
UNIPROTKB|A8J7T2 - symbol:CHLREDRAFT_176572 "Predicted pr...   265  3.8e-22   1
UNIPROTKB|Q0IS25 - symbol:Os11g0572700 "Os11g0572700 prot...   195  1.6e-14   1
TAIR|locus:2033055 - symbol:CRTISO "carotenoid isomerase"...   180  6.5e-13   1
UNIPROTKB|A8J9E9 - symbol:CHLREDRAFT_196597 "Carotenoid i...   163  4.1e-11   1


>TAIR|locus:2009395 [details] [associations]
            symbol:AT1G57770 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0016117 "carotenoid
            biosynthetic process" evidence=IBA] [GO:0016491 "oxidoreductase
            activity" evidence=IEA;ISS] [GO:0046608 "carotenoid isomerase
            activity" evidence=IBA] [GO:0055114 "oxidation-reduction process"
            evidence=IEA] [GO:0009507 "chloroplast" evidence=IDA]
            InterPro:IPR014101 EMBL:CP002684 GO:GO:0009507 GO:GO:0016117
            eggNOG:COG1233 GO:GO:0046608 PANTHER:PTHR10668:SF30 EMBL:AC079732
            OMA:PQCESFM ProtClustDB:CLSN2690470 EMBL:AY065278 EMBL:AY133831
            IPI:IPI00524521 PIR:A96612 RefSeq:NP_176088.2 UniGene:At.28533
            ProteinModelPortal:Q9FVR9 SMR:Q9FVR9 STRING:Q9FVR9 PaxDb:Q9FVR9
            PRIDE:Q9FVR9 EnsemblPlants:AT1G57770.1 GeneID:842152
            KEGG:ath:AT1G57770 TAIR:At1g57770 InParanoid:Q9FVR9
            PhylomeDB:Q9FVR9 ArrayExpress:Q9FVR9 Genevestigator:Q9FVR9
            Uniprot:Q9FVR9
        Length = 574

 Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
 Identities = 89/102 (87%), Positives = 95/102 (93%)

Query:    11 VIWRAVERALGPGFCRDKCDVKFVGTPLTHQRFLRRNRGTYGPAIQAGKETFPGHSTPIP 70
             V+WRAVERALG GF R+KC+V  VGTPLTHQRFLRRNRGTYGPAI+AGK TFPGHSTPIP
Sbjct:   471 VMWRAVERALGLGFKREKCEVSLVGTPLTHQRFLRRNRGTYGPAIEAGKGTFPGHSTPIP 530

Query:    71 QLYCCGDSTFPGIGVPAVAASGAIVANSLVSVSQHSELLDAI 112
             QL CCGDSTFPGIGVPAVAASGAIVANSLV VS+HS+LLDAI
Sbjct:   531 QLLCCGDSTFPGIGVPAVAASGAIVANSLVPVSKHSQLLDAI 572


>UNIPROTKB|Q10AT7 [details] [associations]
            symbol:Os03g0841900 "Os03g0841900 protein" species:39947
            "Oryza sativa Japonica Group" [GO:0009507 "chloroplast"
            evidence=ISS] [GO:0016117 "carotenoid biosynthetic process"
            evidence=ISS] [GO:0046608 "carotenoid isomerase activity"
            evidence=ISS] InterPro:IPR014101 GO:GO:0009507 EMBL:DP000009
            EMBL:AP008209 GO:GO:0016117 EMBL:CM000140 eggNOG:COG1233
            GO:GO:0046608 PANTHER:PTHR10668:SF30 RefSeq:NP_001051855.1
            UniGene:Os.22483 STRING:Q10AT7 EnsemblPlants:LOC_Os03g62510.1
            GeneID:4334739 KEGG:osa:4334739 OMA:PQCESFM ProtClustDB:CLSN2690470
            Uniprot:Q10AT7
        Length = 597

 Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
 Identities = 86/104 (82%), Positives = 97/104 (93%)

Query:    11 VIWRAVERALGPGFCRDKCDVKFVGTPLTHQRFLRRNRGTYGPAIQAGKETFPGHSTPIP 70
             V+W+AVE ALGP F R+KCDVK VG+PLTH+RFLRRNRGTYGPAI+AG+ TFPG +TPIP
Sbjct:   494 VMWKAVELALGPRFSREKCDVKLVGSPLTHKRFLRRNRGTYGPAIKAGEATFPGQATPIP 553

Query:    71 QLYCCGDSTFPGIGVPAVAASGAIVANSLVSVSQHSELLDAIRI 114
             QL+CCGDSTFPGIGVPAVAASGAIVAN+LVSVSQHSELLDA+ I
Sbjct:   554 QLFCCGDSTFPGIGVPAVAASGAIVANTLVSVSQHSELLDAVGI 597


>UNIPROTKB|A8J3K3 [details] [associations]
            symbol:CHLREDRAFT_130438 "Predicted protein" species:3055
            "Chlamydomonas reinhardtii" [GO:0009507 "chloroplast" evidence=ISS]
            [GO:0016117 "carotenoid biosynthetic process" evidence=ISS]
            [GO:0046608 "carotenoid isomerase activity" evidence=ISS]
            InterPro:IPR014101 GO:GO:0009507 GO:GO:0016117 eggNOG:COG1233
            GO:GO:0046608 PANTHER:PTHR10668:SF30 EMBL:DS496135
            RefSeq:XP_001695939.1 UniGene:Cre.3256 ProteinModelPortal:A8J3K3
            ProMEX:A8J3K3 EnsemblPlants:EDP01276 GeneID:5721453
            KEGG:cre:CHLREDRAFT_130438 OMA:ANEPWER ProtClustDB:CLSN2922292
            Uniprot:A8J3K3
        Length = 558

 Score = 323 (118.8 bits), Expect = 1.6e-28, P = 1.6e-28
 Identities = 64/102 (62%), Positives = 77/102 (75%)

Query:    11 VIWRAVERALGPGFCRDKCDVKFVGTPLTHQRFLRRNRGTYGPAIQAGKETFPGHSTPIP 70
             V+W  VE+ + P   R + ++  VGTPLTH+RFLRR+RG+YGPAIQAGK  FPG +TPIP
Sbjct:   457 VLWAGVEKVI-PDI-RKRAELSSVGTPLTHERFLRRHRGSYGPAIQAGKALFPGPTTPIP 514

Query:    71 QLYCCGDSTFPGIGVPAVAASGAIVANSLVSVSQHSELLDAI 112
              LY  GDSTFPGIG+PAVAASG I AN+L  V  H +LLD I
Sbjct:   515 GLYMTGDSTFPGIGLPAVAASGTIAANTLAPVWDHWKLLDEI 556


>UNIPROTKB|A8J7T2 [details] [associations]
            symbol:CHLREDRAFT_176572 "Predicted protein" species:3055
            "Chlamydomonas reinhardtii" [GO:0009507 "chloroplast" evidence=ISS]
            [GO:0016117 "carotenoid biosynthetic process" evidence=ISS]
            [GO:0046608 "carotenoid isomerase activity" evidence=ISS]
            InterPro:IPR014101 GO:GO:0009507 GO:GO:0016117 eggNOG:COG1233
            GO:GO:0046608 PANTHER:PTHR10668:SF30 EMBL:DS496142
            RefSeq:XP_001697619.1 ProteinModelPortal:A8J7T2 GeneID:5723233
            KEGG:cre:CHLREDRAFT_176572 ProtClustDB:CLSN2922724 Uniprot:A8J7T2
        Length = 566

 Score = 265 (98.3 bits), Expect = 3.8e-22, P = 3.8e-22
 Identities = 53/89 (59%), Positives = 65/89 (73%)

Query:    12 IWRAVERALGPGFCRDKCDVKFVGTPLTHQRFLRRNRGTYGPAIQA-GKETFPGHSTPIP 70
             +W A+ER + P   RD+ ++K VG+PLTHQRF+RR+RG+YGP I A G   +PG  TP+P
Sbjct:   478 LWEALERFI-PDI-RDRTELKLVGSPLTHQRFVRRHRGSYGPGISAAGGAGWPGPKTPVP 535

Query:    71 QLYCCGDSTFPGIGVPAVAASGAIVANSL 99
              L  CGDS  PGIGVPA AASG I ANSL
Sbjct:   536 GLTVCGDSCMPGIGVPAAAASGMIAANSL 564


>UNIPROTKB|Q0IS25 [details] [associations]
            symbol:Os11g0572700 "Os11g0572700 protein" species:39947
            "Oryza sativa Japonica Group" [GO:0009507 "chloroplast"
            evidence=ISS] [GO:0016117 "carotenoid biosynthetic process"
            evidence=ISS] [GO:0046608 "carotenoid isomerase activity"
            evidence=ISS] InterPro:IPR014101 GO:GO:0009507 EMBL:AP008217
            GO:GO:0016117 KO:K09835 ProtClustDB:CLSN2680687 GO:GO:0046608
            PANTHER:PTHR10668:SF30 RefSeq:NP_001068127.1 UniGene:Os.69031
            STRING:Q0IS25 PRIDE:Q0IS25 GeneID:4350758 KEGG:osa:4350758
            Gramene:Q0IS25 Uniprot:Q0IS25
        Length = 602

 Score = 195 (73.7 bits), Expect = 1.6e-14, P = 1.6e-14
 Identities = 48/106 (45%), Positives = 64/106 (60%)

Query:    12 IWRAVERALGPGFCRDKCDVKFVGTPLTHQRFLRRNRGTYGPAIQA---GKETFPGHSTP 68
             I + +E+ L PG  +D   +K VG+P TH+RFL RN GTYGP  +    G    P ++T 
Sbjct:   485 IIKRLEKKLFPGL-QDSIVLKEVGSPKTHRRFLARNDGTYGPMPRGKPKGLLAMPFNTTS 543

Query:    69 IPQLYCCGDSTFPGIGVPAVAASGAIVANSL---VSVSQHSELLDA 111
             I  LYC GDS FPG GV AVA SG + A+ +   + + Q S +LDA
Sbjct:   544 IDGLYCVGDSCFPGQGVIAVAFSGIMCAHRVAADIGLEQRSPVLDA 589


>TAIR|locus:2033055 [details] [associations]
            symbol:CRTISO "carotenoid isomerase" species:3702
            "Arabidopsis thaliana" [GO:0009055 "electron carrier activity"
            evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IBA;TAS]
            [GO:0016117 "carotenoid biosynthetic process" evidence=IEA;IGI;TAS]
            [GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016853
            "isomerase activity" evidence=IEA] [GO:0055114 "oxidation-reduction
            process" evidence=IEA] [GO:0009662 "etioplast organization"
            evidence=IMP] [GO:0046608 "carotenoid isomerase activity"
            evidence=IGI;IMP] UniPathway:UPA00803 InterPro:IPR014101
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0031969
            GO:GO:0016117 EMBL:AC011001 EMBL:BX813870 IPI:IPI00534972
            PIR:A86203 RefSeq:NP_172167.2 UniGene:At.47600 UniGene:At.51507
            UniGene:At.67219 ProteinModelPortal:Q9M9Y8 SMR:Q9M9Y8 STRING:Q9M9Y8
            PaxDb:Q9M9Y8 PRIDE:Q9M9Y8 EnsemblPlants:AT1G06820.1 GeneID:837193
            KEGG:ath:AT1G06820 TAIR:At1g06820 eggNOG:COG1233
            HOGENOM:HOG000150223 InParanoid:Q9M9Y8 KO:K09835 OMA:AVGRKME
            PhylomeDB:Q9M9Y8 ProtClustDB:CLSN2680687
            BioCyc:ARA:AT1G06820-MONOMER BioCyc:MetaCyc:AT1G06820-MONOMER
            Genevestigator:Q9M9Y8 GermOnline:AT1G06820 GO:GO:0046608
            GO:GO:0009662 PANTHER:PTHR10668:SF30 TIGRFAMs:TIGR02730
            Uniprot:Q9M9Y8
        Length = 595

 Score = 180 (68.4 bits), Expect = 6.5e-13, P = 6.5e-13
 Identities = 45/105 (42%), Positives = 61/105 (58%)

Query:    12 IWRAVERALGPGFCRDKCDVKFVGTPLTHQRFLRRNRGTYGPAIQA---GKETFPGHSTP 68
             I + +E+ L PG        K VGTP TH+RFL R++GTYGP  +    G    P ++T 
Sbjct:   478 IIQRLEKKLFPGLS-SSITFKEVGTPRTHRRFLARDKGTYGPMPRGTPKGLLGMPFNTTA 536

Query:    69 IPQLYCCGDSTFPGIGVPAVAASGAIVANSL---VSVSQHSELLD 110
             I  LYC GDS FPG GV AVA SG + A+ +   + + + S +LD
Sbjct:   537 IDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSRVLD 581


>UNIPROTKB|A8J9E9 [details] [associations]
            symbol:CHLREDRAFT_196597 "Carotenoid isomerase"
            species:3055 "Chlamydomonas reinhardtii" [GO:0009507 "chloroplast"
            evidence=ISS] [GO:0016117 "carotenoid biosynthetic process"
            evidence=ISS] [GO:0046608 "carotenoid isomerase activity"
            evidence=ISS] InterPro:IPR014101 GO:GO:0009507 GO:GO:0016117
            eggNOG:COG1233 ProtClustDB:CLSN2680687 GO:GO:0046608 GO:GO:0009662
            PANTHER:PTHR10668:SF30 TIGRFAMs:TIGR02730 EMBL:DS496146
            RefSeq:XP_001698231.1 ProteinModelPortal:A8J9E9 STRING:A8J9E9
            PRIDE:A8J9E9 EnsemblPlants:EDO99516 GeneID:5723787
            KEGG:cre:CHLREDRAFT_196597 Uniprot:A8J9E9
        Length = 568

 Score = 163 (62.4 bits), Expect = 4.1e-11, P = 4.1e-11
 Identities = 38/77 (49%), Positives = 45/77 (58%)

Query:    19 ALGPGFCRDKCDVKFVGTPLTHQRFLRRNRGTYGPAIQA---GKETFPGHSTPIPQLYCC 75
             A+ PG   +    + VGTP TH+RFL R  GTYGP       G  + P ++T IP LYC 
Sbjct:   481 AILPGLSSN-ITFREVGTPRTHRRFLNREDGTYGPIPSRRPLGMLSMPFNTTDIPGLYCV 539

Query:    76 GDSTFPGIGVPAVAASG 92
             GDS FPG GV AV  SG
Sbjct:   540 GDSAFPGQGVNAVVFSG 556


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.140   0.444    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      114       114   0.00091  102 3  11 22  0.42    30
                                                     29  0.44    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  576 (61 KB)
  Total size of DFA:  126 KB (2080 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.92u 0.13s 12.05t   Elapsed:  00:00:00
  Total cpu time:  11.92u 0.13s 12.05t   Elapsed:  00:00:00
  Start:  Thu May  9 22:31:02 2013   End:  Thu May  9 22:31:02 2013

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