Query 033665
Match_columns 114
No_of_seqs 122 out of 1014
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 07:41:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033665.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033665hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dgk_A Phytoene dehydrogenase; 99.9 5.5E-26 1.9E-30 177.1 3.5 100 2-102 387-490 (501)
2 3ka7_A Oxidoreductase; structu 98.8 1E-08 3.5E-13 77.7 7.7 80 6-101 343-425 (425)
3 1b37_A Protein (polyamine oxid 98.6 9.5E-09 3.2E-13 79.6 1.1 91 5-102 362-457 (472)
4 2yg5_A Putrescine oxidase; oxi 98.4 1.1E-07 3.9E-12 72.7 3.0 91 5-102 355-450 (453)
5 1s3e_A Amine oxidase [flavin-c 98.3 1E-07 3.5E-12 74.6 1.5 88 5-102 357-453 (520)
6 2jae_A L-amino acid oxidase; o 98.3 3.7E-07 1.2E-11 70.7 3.5 92 5-102 384-484 (489)
7 3nrn_A Uncharacterized protein 98.2 9.6E-06 3.3E-10 61.6 8.7 74 7-99 328-403 (421)
8 2ivd_A PPO, PPOX, protoporphyr 97.8 2E-06 6.7E-11 66.2 -1.3 86 4-103 385-473 (478)
9 3qj4_A Renalase; FAD/NAD(P)-bi 97.5 0.00034 1.2E-08 51.5 7.5 80 5-102 259-341 (342)
10 3kkj_A Amine oxidase, flavin-c 97.2 0.0002 6.7E-09 48.4 3.0 36 66-102 291-326 (336)
11 2iid_A L-amino-acid oxidase; f 97.0 7.8E-05 2.7E-09 57.7 -0.8 91 5-102 386-483 (498)
12 1sez_A Protoporphyrinogen oxid 96.7 0.00088 3E-08 51.7 3.3 87 5-102 406-492 (504)
13 3lov_A Protoporphyrinogen oxid 96.6 0.0013 4.5E-08 50.3 3.5 38 67-105 430-467 (475)
14 3nks_A Protoporphyrinogen oxid 96.6 0.0019 6.6E-08 49.3 4.0 34 69-103 441-474 (477)
15 3i6d_A Protoporphyrinogen oxid 96.5 0.0016 5.4E-08 49.4 3.3 35 67-102 433-467 (470)
16 3k7m_X 6-hydroxy-L-nicotine ox 95.8 0.024 8.2E-07 42.6 6.7 85 10-103 338-426 (431)
17 2z3y_A Lysine-specific histone 95.6 0.048 1.7E-06 44.1 7.9 92 5-102 549-657 (662)
18 1yvv_A Amine oxidase, flavin-c 95.2 0.014 4.8E-07 42.2 3.4 35 68-103 293-327 (336)
19 4gut_A Lysine-specific histone 95.1 0.021 7.2E-07 47.4 4.6 91 5-101 680-775 (776)
20 2vvm_A Monoamine oxidase N; FA 94.8 0.016 5.3E-07 44.6 2.9 86 9-102 395-484 (495)
21 2xag_A Lysine-specific histone 94.7 0.042 1.4E-06 46.1 5.4 92 5-102 720-828 (852)
22 2e1m_C L-glutamate oxidase; L- 94.7 0.024 8.1E-07 38.9 3.2 93 6-103 57-152 (181)
23 4gcm_A TRXR, thioredoxin reduc 92.1 0.19 6.5E-06 36.0 4.6 38 64-101 265-303 (312)
24 4a5l_A Thioredoxin reductase; 92.0 0.18 6E-06 35.9 4.3 36 65-100 272-308 (314)
25 3nlc_A Uncharacterized protein 91.8 0.06 2.1E-06 43.0 1.7 38 65-102 503-541 (549)
26 4fk1_A Putative thioredoxin re 90.3 0.15 5.3E-06 36.5 2.5 38 64-101 259-297 (304)
27 2b9w_A Putative aminooxidase; 90.3 0.21 7.1E-06 37.4 3.3 32 67-100 391-423 (424)
28 3fbs_A Oxidoreductase; structu 90.1 0.31 1E-05 34.2 3.9 37 65-101 253-289 (297)
29 3f8d_A Thioredoxin reductase ( 89.9 0.43 1.5E-05 33.7 4.6 38 65-102 275-315 (323)
30 2cul_A Glucose-inhibited divis 89.8 0.22 7.4E-06 34.6 2.9 34 67-102 196-230 (232)
31 3fpz_A Thiazole biosynthetic e 89.8 0.14 4.7E-06 37.4 1.9 39 64-102 278-323 (326)
32 1rsg_A FMS1 protein; FAD bindi 89.7 0.33 1.1E-05 37.6 4.1 35 68-102 470-506 (516)
33 3itj_A Thioredoxin reductase 1 89.2 0.29 1E-05 34.9 3.3 37 66-102 296-333 (338)
34 2oln_A NIKD protein; flavoprot 89.2 0.69 2.4E-05 34.2 5.4 77 7-103 295-375 (397)
35 3r9u_A Thioredoxin reductase; 89.1 0.38 1.3E-05 34.0 3.7 38 64-101 271-309 (315)
36 3oz2_A Digeranylgeranylglycero 88.3 0.32 1.1E-05 35.3 3.0 33 69-101 276-313 (397)
37 1fl2_A Alkyl hydroperoxide red 88.2 0.69 2.3E-05 32.8 4.6 37 65-101 265-302 (310)
38 3cty_A Thioredoxin reductase; 87.6 0.75 2.6E-05 32.8 4.6 37 65-101 276-313 (319)
39 3dje_A Fructosyl amine: oxygen 87.3 0.9 3.1E-05 34.0 5.0 79 6-104 307-386 (438)
40 4gde_A UDP-galactopyranose mut 86.8 0.6 2E-05 35.5 3.8 33 70-102 443-478 (513)
41 2ywl_A Thioredoxin reductase r 85.9 0.81 2.8E-05 30.0 3.7 39 64-102 130-169 (180)
42 2q0l_A TRXR, thioredoxin reduc 85.6 1.1 3.9E-05 31.6 4.6 37 65-101 269-306 (311)
43 4dna_A Probable glutathione re 85.4 1 3.4E-05 34.4 4.5 40 64-103 293-332 (463)
44 1dxl_A Dihydrolipoamide dehydr 85.3 1.3 4.6E-05 33.6 5.1 40 64-103 304-343 (470)
45 3lzw_A Ferredoxin--NADP reduct 85.1 0.75 2.6E-05 32.6 3.4 37 65-101 273-312 (332)
46 3dgh_A TRXR-1, thioredoxin red 85.0 1.2 4E-05 34.2 4.7 40 64-103 313-353 (483)
47 2q7v_A Thioredoxin reductase; 84.5 1.2 3.9E-05 31.9 4.2 38 65-102 272-310 (325)
48 1vdc_A NTR, NADPH dependent th 84.4 0.79 2.7E-05 32.8 3.3 36 66-101 284-320 (333)
49 4a9w_A Monooxygenase; baeyer-v 84.1 0.8 2.7E-05 32.7 3.2 38 65-102 310-350 (357)
50 3urh_A Dihydrolipoyl dehydroge 83.7 1.2 4.2E-05 34.2 4.3 40 64-103 325-364 (491)
51 3qfa_A Thioredoxin reductase 1 83.3 1.1 3.7E-05 35.0 3.9 40 64-103 341-381 (519)
52 1d4d_A Flavocytochrome C fumar 83.3 0.4 1.4E-05 38.0 1.4 35 67-101 525-567 (572)
53 1trb_A Thioredoxin reductase; 83.3 0.95 3.2E-05 32.1 3.3 36 66-101 275-311 (320)
54 1i8t_A UDP-galactopyranose mut 82.9 1.7 5.7E-05 32.3 4.6 34 69-102 332-366 (367)
55 3dk9_A Grase, GR, glutathione 82.8 1.1 3.9E-05 34.2 3.8 39 64-102 318-356 (478)
56 3o0h_A Glutathione reductase; 82.7 1.1 3.8E-05 34.4 3.7 39 65-103 314-352 (484)
57 3l8k_A Dihydrolipoyl dehydroge 82.3 1.3 4.3E-05 33.9 3.8 38 65-102 296-333 (466)
58 3ic9_A Dihydrolipoamide dehydr 82.1 1 3.5E-05 34.8 3.3 37 65-101 301-337 (492)
59 3dgz_A Thioredoxin reductase 2 82.0 1.3 4.4E-05 34.1 3.8 40 64-103 313-353 (488)
60 2vdc_G Glutamate synthase [NAD 82.0 1.1 3.9E-05 34.5 3.5 37 65-101 405-441 (456)
61 1ebd_A E3BD, dihydrolipoamide 81.6 1.7 5.8E-05 33.0 4.3 40 64-103 295-334 (455)
62 2a8x_A Dihydrolipoyl dehydroge 81.6 1.3 4.5E-05 33.7 3.7 37 65-101 297-333 (464)
63 1zk7_A HGII, reductase, mercur 81.4 2.3 7.9E-05 32.3 5.0 38 65-102 297-334 (467)
64 3lad_A Dihydrolipoamide dehydr 81.3 1.3 4.4E-05 33.8 3.6 40 64-103 305-344 (476)
65 1hyu_A AHPF, alkyl hydroperoxi 81.2 2 6.7E-05 33.5 4.6 38 64-101 475-513 (521)
66 1zmd_A Dihydrolipoyl dehydroge 80.9 1.5 5.3E-05 33.4 3.9 39 65-103 308-346 (474)
67 4at0_A 3-ketosteroid-delta4-5a 80.8 0.49 1.7E-05 36.8 1.1 36 66-101 465-508 (510)
68 2a87_A TRXR, TR, thioredoxin r 80.6 1.4 4.7E-05 31.8 3.4 36 66-101 277-313 (335)
69 1ges_A Glutathione reductase; 80.6 1.6 5.6E-05 33.2 4.0 38 65-102 291-328 (450)
70 1qo8_A Flavocytochrome C3 fuma 80.3 0.62 2.1E-05 36.7 1.5 35 67-101 519-561 (566)
71 2hqm_A GR, grase, glutathione 80.2 1.7 5.9E-05 33.3 4.0 39 65-103 310-348 (479)
72 1chu_A Protein (L-aspartate ox 80.1 0.67 2.3E-05 36.5 1.6 37 64-100 362-407 (540)
73 1v59_A Dihydrolipoamide dehydr 80.0 1.5 5.1E-05 33.5 3.6 40 64-103 312-351 (478)
74 2eq6_A Pyruvate dehydrogenase 79.9 1.7 5.9E-05 33.1 3.9 39 65-103 297-335 (464)
75 2zbw_A Thioredoxin reductase; 79.8 2.1 7.3E-05 30.5 4.2 37 65-101 275-314 (335)
76 2qae_A Lipoamide, dihydrolipoy 79.8 2 6.9E-05 32.7 4.2 40 64-103 301-341 (468)
77 1ojt_A Surface protein; redox- 79.7 1.8 6.1E-05 33.2 3.9 39 65-103 312-350 (482)
78 1y0p_A Fumarate reductase flav 79.4 0.61 2.1E-05 36.8 1.2 35 67-101 524-566 (571)
79 1xdi_A RV3303C-LPDA; reductase 79.4 1.9 6.3E-05 33.3 3.9 38 65-102 305-342 (499)
80 2wpf_A Trypanothione reductase 78.9 1.8 6.3E-05 33.4 3.8 38 65-102 318-355 (495)
81 1ryi_A Glycine oxidase; flavop 78.7 2.2 7.5E-05 31.0 4.0 83 6-108 285-368 (382)
82 1fec_A Trypanothione reductase 78.6 1.9 6.5E-05 33.2 3.8 38 65-102 314-351 (490)
83 3lxd_A FAD-dependent pyridine 78.2 1.2 4.2E-05 33.3 2.5 39 65-103 273-322 (415)
84 2r9z_A Glutathione amide reduc 78.1 2 6.9E-05 32.8 3.8 38 65-102 290-327 (463)
85 3klj_A NAD(FAD)-dependent dehy 78.1 1.7 5.8E-05 32.6 3.3 40 64-103 252-295 (385)
86 1mo9_A ORF3; nucleotide bindin 77.6 2.1 7.3E-05 33.3 3.8 39 65-103 341-379 (523)
87 2gf3_A MSOX, monomeric sarcosi 77.3 2.6 9E-05 30.6 4.1 77 7-103 289-365 (389)
88 3ab1_A Ferredoxin--NADP reduct 76.8 3.1 0.00011 30.1 4.3 37 65-101 286-325 (360)
89 2v3a_A Rubredoxin reductase; a 76.8 1.9 6.6E-05 31.8 3.2 39 65-103 265-307 (384)
90 1kf6_A Fumarate reductase flav 75.9 0.96 3.3E-05 36.2 1.4 37 64-100 367-412 (602)
91 2x8g_A Thioredoxin glutathione 74.5 2.5 8.6E-05 33.3 3.5 38 65-102 421-459 (598)
92 3ef6_A Toluene 1,2-dioxygenase 74.5 1.7 5.9E-05 32.6 2.5 39 65-103 263-310 (410)
93 2h88_A Succinate dehydrogenase 73.9 0.8 2.7E-05 37.0 0.5 34 67-100 387-429 (621)
94 1lvl_A Dihydrolipoamide dehydr 73.7 3.1 0.00011 31.6 3.8 39 65-103 293-331 (458)
95 3fg2_P Putative rubredoxin red 73.3 1.5 5.1E-05 32.8 1.8 39 65-103 263-311 (404)
96 2gmh_A Electron transfer flavo 72.2 3.9 0.00013 32.4 4.1 33 69-101 346-383 (584)
97 1xhc_A NADH oxidase /nitrite r 72.0 3 0.0001 30.9 3.2 39 65-103 256-298 (367)
98 2bi7_A UDP-galactopyranose mut 71.7 1.9 6.5E-05 32.3 2.1 33 69-101 335-368 (384)
99 1v0j_A UDP-galactopyranose mut 71.1 1.1 3.7E-05 33.7 0.6 32 70-101 353-385 (399)
100 1onf_A GR, grase, glutathione 70.9 5.9 0.0002 30.5 4.8 39 64-102 299-371 (500)
101 1jnr_A Adenylylsulfate reducta 70.7 2.9 0.0001 33.6 3.1 15 66-80 428-442 (643)
102 3oc4_A Oxidoreductase, pyridin 70.7 1.3 4.3E-05 33.7 0.9 40 64-103 266-315 (452)
103 2e5v_A L-aspartate oxidase; ar 70.6 0.83 2.8E-05 35.3 -0.1 38 64-101 324-370 (472)
104 4dsg_A UDP-galactopyranose mut 70.5 3.9 0.00013 31.5 3.7 30 71-100 420-452 (484)
105 2xve_A Flavin-containing monoo 69.7 6.3 0.00022 30.1 4.7 36 67-103 305-340 (464)
106 3kd9_A Coenzyme A disulfide re 69.7 5.4 0.00019 30.1 4.3 40 64-103 267-316 (449)
107 2bs2_A Quinol-fumarate reducta 69.6 2.6 9E-05 34.2 2.6 36 64-99 380-424 (660)
108 2i0z_A NAD(FAD)-utilizing dehy 68.8 2.1 7.1E-05 32.5 1.8 35 67-101 402-441 (447)
109 2yqu_A 2-oxoglutarate dehydrog 68.6 4.3 0.00015 30.7 3.5 39 65-103 290-328 (455)
110 2gqw_A Ferredoxin reductase; f 68.0 3.1 0.00011 31.2 2.6 39 65-103 261-309 (408)
111 2cdu_A NADPH oxidase; flavoenz 67.6 3.7 0.00013 31.1 2.9 40 64-103 269-318 (452)
112 1gpe_A Protein (glucose oxidas 66.6 19 0.00066 28.5 7.1 40 63-102 538-582 (587)
113 2jbv_A Choline oxidase; alcoho 65.6 21 0.00072 27.9 7.0 41 63-103 485-530 (546)
114 3v76_A Flavoprotein; structura 65.4 3.9 0.00013 31.1 2.7 31 68-98 381-416 (417)
115 3cgb_A Pyridine nucleotide-dis 65.3 4.4 0.00015 31.0 3.0 39 65-103 306-354 (480)
116 3k30_A Histamine dehydrogenase 65.3 3.8 0.00013 33.1 2.7 35 67-102 639-673 (690)
117 3atr_A Conserved archaeal prot 65.2 5 0.00017 30.3 3.3 33 69-101 281-318 (453)
118 1coy_A Cholesterol oxidase; ox 65.1 5 0.00017 31.1 3.3 40 63-102 460-504 (507)
119 1q1r_A Putidaredoxin reductase 64.9 3.3 0.00011 31.3 2.2 39 65-103 272-320 (431)
120 1cjc_A Protein (adrenodoxin re 64.8 2.1 7E-05 33.0 1.0 38 65-102 354-393 (460)
121 2wdq_A Succinate dehydrogenase 64.6 1.1 3.6E-05 35.8 -0.7 33 68-100 379-420 (588)
122 1lqt_A FPRA; NADP+ derivative, 63.5 2.7 9.2E-05 32.3 1.5 36 67-102 349-385 (456)
123 3ayj_A Pro-enzyme of L-phenyla 63.3 4.9 0.00017 33.2 3.0 35 68-102 643-678 (721)
124 3c4a_A Probable tryptophan hyd 63.0 7 0.00024 28.7 3.7 33 70-102 262-299 (381)
125 2bc0_A NADH oxidase; flavoprot 61.8 5.7 0.00019 30.5 3.1 39 65-103 314-362 (490)
126 4eqs_A Coenzyme A disulfide re 61.6 6.5 0.00022 29.8 3.3 40 64-103 263-312 (437)
127 4b1b_A TRXR, thioredoxin reduc 61.2 11 0.00036 29.8 4.6 39 65-103 346-385 (542)
128 3ntd_A FAD-dependent pyridine 60.9 8.4 0.00029 29.8 3.9 39 65-103 291-339 (565)
129 3gyx_A Adenylylsulfate reducta 60.6 8.4 0.00029 31.3 3.9 15 65-79 448-462 (662)
130 1gte_A Dihydropyrimidine dehyd 59.6 7.6 0.00026 33.0 3.7 37 65-101 469-505 (1025)
131 3rp8_A Flavoprotein monooxygen 58.9 11 0.00037 27.7 4.1 34 69-102 300-338 (407)
132 3iwa_A FAD-dependent pyridine 57.9 4.7 0.00016 30.6 2.0 39 65-103 282-330 (472)
133 3nyc_A D-arginine dehydrogenas 57.8 9.8 0.00034 27.3 3.6 36 68-105 326-361 (381)
134 2vou_A 2,6-dihydroxypyridine h 57.3 10 0.00034 27.9 3.6 34 69-102 298-336 (397)
135 3h28_A Sulfide-quinone reducta 56.1 14 0.00047 27.6 4.3 38 64-101 280-330 (430)
136 2gjc_A Thiazole biosynthetic e 56.0 12 0.00041 27.7 3.9 35 68-102 282-323 (326)
137 1o94_A Tmadh, trimethylamine d 55.8 6.3 0.00021 32.1 2.5 36 66-102 663-698 (729)
138 1nhp_A NADH peroxidase; oxidor 55.5 6 0.0002 29.8 2.2 39 65-103 269-317 (447)
139 3alj_A 2-methyl-3-hydroxypyrid 55.4 6.6 0.00022 28.7 2.3 33 70-102 281-318 (379)
140 2uzz_A N-methyl-L-tryptophan o 54.8 11 0.00039 27.0 3.5 34 69-104 326-359 (372)
141 1y56_B Sarcosine oxidase; dehy 54.4 8.4 0.00029 27.9 2.8 33 69-103 324-356 (382)
142 3cgv_A Geranylgeranyl reductas 54.2 9.5 0.00033 27.6 3.0 33 69-101 276-313 (397)
143 1n4w_A CHOD, cholesterol oxida 53.3 11 0.00036 29.2 3.3 40 63-102 455-499 (504)
144 3d1c_A Flavin-containing putat 52.8 14 0.00049 26.4 3.8 37 66-102 297-337 (369)
145 3nix_A Flavoprotein/dehydrogen 52.3 8.6 0.0003 28.2 2.6 33 69-101 287-324 (421)
146 2gqf_A Hypothetical protein HI 51.8 9.3 0.00032 28.7 2.7 34 67-100 361-399 (401)
147 3ics_A Coenzyme A-disulfide re 51.7 13 0.00046 29.0 3.7 38 64-101 305-352 (588)
148 3h8l_A NADH oxidase; membrane 51.7 12 0.00043 27.5 3.4 39 64-102 293-334 (409)
149 3c96_A Flavin-containing monoo 51.6 9.6 0.00033 28.2 2.7 34 69-102 302-340 (410)
150 2gag_A Heterotetrameric sarcos 51.2 11 0.00039 31.8 3.3 34 67-101 408-441 (965)
151 2opa_A Probable tautomerase YW 50.9 19 0.00065 19.0 3.3 20 2-21 13-32 (61)
152 3cp8_A TRNA uridine 5-carboxym 50.7 11 0.00038 30.6 3.1 38 65-103 373-415 (641)
153 1otf_A 4-oxalocrotonate tautom 49.7 18 0.00063 19.1 3.1 20 2-21 13-32 (62)
154 1y56_A Hypothetical protein PH 45.3 18 0.00063 27.7 3.5 34 68-102 342-375 (493)
155 3ces_A MNMG, tRNA uridine 5-ca 44.8 18 0.0006 29.6 3.4 39 64-103 378-421 (651)
156 3qvp_A Glucose oxidase; oxidor 43.8 55 0.0019 26.1 6.1 67 36-102 499-578 (583)
157 2e4g_A Tryptophan halogenase; 43.6 17 0.00057 28.3 3.1 33 69-101 360-397 (550)
158 3vrd_B FCCB subunit, flavocyto 42.9 19 0.00067 26.3 3.2 35 67-101 284-321 (401)
159 1p3q_Q VPS9P, vacuolar protein 42.6 14 0.00048 20.4 1.8 25 3-29 6-30 (54)
160 3pl8_A Pyranose 2-oxidase; sub 42.6 19 0.00066 28.7 3.3 36 68-103 574-613 (623)
161 1gyx_A YDCE, B1461, hypothetic 42.3 45 0.0015 18.7 4.4 40 2-42 14-53 (76)
162 1ju2_A HydroxynitrIle lyase; f 42.2 18 0.00063 28.2 3.1 39 63-101 472-515 (536)
163 3axb_A Putative oxidoreductase 42.2 26 0.0009 26.0 3.9 33 70-104 388-420 (448)
164 3sx6_A Sulfide-quinone reducta 41.4 22 0.00075 26.6 3.3 38 64-101 291-341 (437)
165 2gv8_A Monooxygenase; FMO, FAD 40.8 32 0.0011 25.7 4.2 36 67-103 326-361 (447)
166 1kdg_A CDH, cellobiose dehydro 40.6 24 0.00081 27.3 3.5 40 63-102 498-542 (546)
167 2weu_A Tryptophan 5-halogenase 40.4 14 0.00049 28.1 2.2 33 69-101 337-374 (511)
168 3m20_A 4-oxalocrotonate tautom 40.4 43 0.0015 17.9 4.2 20 2-21 12-31 (62)
169 2zxi_A TRNA uridine 5-carboxym 39.7 18 0.0006 29.5 2.7 38 65-103 384-426 (637)
170 2aqj_A Tryptophan halogenase, 39.2 15 0.00052 28.3 2.2 33 69-101 329-366 (538)
171 1rp0_A ARA6, thiazole biosynth 38.7 9.5 0.00032 26.9 0.9 36 68-103 232-274 (284)
172 3hyw_A Sulfide-quinone reducta 37.9 28 0.00094 26.1 3.4 35 67-101 284-330 (430)
173 2x3n_A Probable FAD-dependent 37.1 17 0.00059 26.5 2.1 33 69-101 285-322 (399)
174 3fim_B ARYL-alcohol oxidase; A 35.8 33 0.0011 27.2 3.7 40 63-102 521-565 (566)
175 3b64_A Macrophage migration in 35.6 33 0.0011 20.7 3.0 33 3-37 71-103 (112)
176 2gag_B Heterotetrameric sarcos 35.4 22 0.00075 25.7 2.4 33 69-103 344-376 (405)
177 1c0p_A D-amino acid oxidase; a 35.2 26 0.00089 25.1 2.8 31 70-102 327-357 (363)
178 3m21_A Probable tautomerase HP 35.0 40 0.0014 18.3 3.1 20 2-21 16-35 (67)
179 4hb9_A Similarities with proba 34.9 14 0.00049 26.6 1.4 33 69-101 310-347 (412)
180 3ry0_A Putative tautomerase; o 33.4 51 0.0017 17.7 3.3 20 2-21 13-32 (65)
181 3i3l_A Alkylhalidase CMLS; fla 33.4 26 0.00089 27.8 2.7 33 69-101 307-344 (591)
182 3ps9_A TRNA 5-methylaminomethy 33.2 25 0.00084 28.1 2.6 35 69-105 614-648 (676)
183 3t37_A Probable dehydrogenase; 32.5 39 0.0013 25.7 3.5 20 63-82 479-499 (526)
184 3g5s_A Methylenetetrahydrofola 32.2 22 0.00075 27.8 2.0 35 68-103 327-365 (443)
185 1k0i_A P-hydroxybenzoate hydro 32.1 23 0.0008 25.7 2.1 33 69-101 278-315 (394)
186 2x4k_A 4-oxalocrotonate tautom 31.7 57 0.002 16.8 4.0 20 2-21 16-35 (63)
187 3pvc_A TRNA 5-methylaminomethy 31.7 27 0.00092 28.0 2.6 35 69-105 618-652 (689)
188 3g3e_A D-amino-acid oxidase; F 31.3 30 0.001 24.7 2.6 79 7-103 254-334 (351)
189 3fwt_A Macrophage migration in 30.7 39 0.0013 21.4 2.8 30 3-34 92-121 (133)
190 2xdo_A TETX2 protein; tetracyc 30.6 25 0.00085 25.8 2.1 31 71-101 315-350 (398)
191 3ihg_A RDME; flavoenzyme, anth 30.2 36 0.0012 26.1 3.0 32 70-101 301-337 (535)
192 2bcg_G Secretory pathway GDP d 29.4 67 0.0023 24.1 4.3 36 67-103 406-441 (453)
193 3jsk_A Cypbp37 protein; octame 28.3 34 0.0012 25.5 2.5 38 69-106 293-337 (344)
194 3ej9_A Alpha-subunit of trans- 27.6 64 0.0022 18.1 3.2 20 2-21 14-33 (76)
195 3mb2_A 4-oxalocrotonate tautom 27.1 59 0.002 17.9 2.9 20 2-21 14-33 (72)
196 1uiz_A MIF, macrophage migrati 26.3 80 0.0028 18.9 3.6 33 2-36 70-102 (115)
197 2xcz_A Possible ATLS1-like lig 25.9 77 0.0026 19.0 3.5 33 2-36 70-102 (115)
198 2dkh_A 3-hydroxybenzoate hydro 25.9 63 0.0021 25.7 3.7 32 69-100 341-377 (639)
199 1hfo_A Migration inhibitory fa 25.8 83 0.0028 18.7 3.6 31 2-34 69-99 (113)
200 2wkb_A Macrophage migration in 25.5 94 0.0032 19.1 3.9 33 3-37 71-103 (125)
201 1ghh_A DINI, DNA-damage-induci 24.8 1.1E+02 0.0039 18.0 4.5 30 4-35 17-46 (81)
202 3dme_A Conserved exported prot 24.5 66 0.0022 22.6 3.3 30 68-99 338-367 (369)
203 2os5_A Acemif; macrophage migr 24.4 90 0.0031 18.9 3.6 33 2-36 70-102 (119)
204 1m6i_A Programmed cell death p 24.2 56 0.0019 24.9 3.1 37 66-103 308-353 (493)
205 2aal_A Malonate semialdehyde d 23.6 94 0.0032 19.2 3.6 32 2-35 78-109 (131)
206 4dh4_A MIF; trimer, isomerase; 23.2 1.3E+02 0.0044 18.0 4.3 19 3-21 71-89 (114)
207 3q9t_A Choline dehydrogenase a 23.1 58 0.002 25.8 3.0 41 63-103 528-573 (577)
208 3e6q_A Putative 5-carboxymethy 23.1 88 0.003 20.3 3.5 20 2-21 95-114 (146)
209 3djh_A Macrophage migration in 22.2 1E+02 0.0035 18.5 3.6 30 3-34 70-99 (114)
210 3kan_A D-dopachrome tautomeras 21.0 1.5E+02 0.0051 18.0 4.3 29 3-33 71-99 (117)
211 2qa2_A CABE, polyketide oxygen 20.8 49 0.0017 25.4 2.2 31 70-100 278-313 (499)
212 2qa1_A PGAE, polyketide oxygen 20.7 50 0.0017 25.4 2.2 31 70-100 277-312 (500)
213 3fwu_A Macrophage migration in 20.6 1.5E+02 0.0051 18.6 4.2 29 3-33 92-120 (133)
214 1otg_A 5-carboxymethyl-2-hydro 20.5 83 0.0028 19.6 2.9 19 2-20 73-91 (125)
215 3jyw_S 60S ribosomal protein L 20.3 36 0.0012 17.9 0.9 15 74-88 1-15 (45)
No 1
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.91 E-value=5.5e-26 Score=177.09 Aligned_cols=100 Identities=22% Similarity=0.345 Sum_probs=63.1
Q ss_pred hhHHHHHHHHHHHHHHHHhCCCCCCCceeEEEeCCHHHHHHHhCCCCCC-CCCCCCCCCcCC--CCC-CCCCCcEEEcCC
Q 033665 2 KILSVLKYCVIWRAVERALGPGFCRDKCDVKFVGTPLTHQRFLRRNRGT-YGPAIQAGKETF--PGH-STPIPQLYCCGD 77 (114)
Q Consensus 2 ~~~K~~~~~~il~~l~~~~gP~i~~~~I~~~~~~TP~t~~~~~~~~~G~-~G~~~~~~q~~~--p~~-~t~v~nLyl~G~ 77 (114)
++.|+++++++++.+++++.|+| +++|+++++.||.||++|++.++|+ ||..+++.|..+ |.+ .|||+|||+||+
T Consensus 387 ~~~~~~~~~~vl~~l~~~~~P~~-~~~i~~~~~~tP~~~~~~~~~~~G~~~g~~~~~~q~~~~RP~~~~t~i~gLyl~G~ 465 (501)
T 4dgk_A 387 TVEGPKLRDRIFAYLEQHYMPGL-RSQLVTHRMFTPFDFRDQLNAYHGSAFSVEPVLTQSAWFRPHNRDKTITNLYLVGA 465 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTH-HHHEEEEEEECTTTTC------------------------------CCTTEEECCC
T ss_pred HHHHHHHHHHHHHHHHHhhCCCh-HHceEEEEECCHHHHHHHcCCCCccccChhcchhhccccCCCCCCCCCCCEEEECC
Confidence 35789999999999997544999 9999999999999999999999999 999999888754 654 588999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhcc
Q 033665 78 STFPGIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 78 ~~~PG~Gv~ga~~sg~~~a~~i~~~ 102 (114)
|+|||+||+||++||++||+.|+++
T Consensus 466 ~t~pG~Gv~ga~~SG~~aA~~il~d 490 (501)
T 4dgk_A 466 GTHPGAGIPGVIGSAKATAGLMLED 490 (501)
T ss_dssp H------HHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999975
No 2
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.82 E-value=1e-08 Score=77.73 Aligned_cols=80 Identities=24% Similarity=0.269 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCceeEEEeCCHHHHHHHhCC-CCCCCCCCCCCCCcCCCCCCCCCCcEEEcCCCCCC--C
Q 033665 6 VLKYCVIWRAVERALGPGFCRDKCDVKFVGTPLTHQRFLRR-NRGTYGPAIQAGKETFPGHSTPIPQLYCCGDSTFP--G 82 (114)
Q Consensus 6 ~~~~~~il~~l~~~~gP~i~~~~I~~~~~~TP~t~~~~~~~-~~G~~G~~~~~~q~~~p~~~t~v~nLyl~G~~~~P--G 82 (114)
++..+.+++.|++++ |++ +..++.... |... |. |... ...++..++|++|||+||+|++| |
T Consensus 343 ~~~~~~~~~~l~~~~-p~~-~~~~~~v~~--------~~~~~P~--~~~~----~~~~~~~~~p~~gL~laG~~~~~~gg 406 (425)
T 3ka7_A 343 ESEIEMGLEDLKEIF-PGK-RYEVLLIQS--------YHDEWPV--NRAA----SGTDPGNETPFSGLYVVGDGAKGKGG 406 (425)
T ss_dssp HHHHHHHHHHHHHHS-TTC-CEEEEEEEE--------EBTTBCS--BSSC----TTCCCCSBCSSBTEEECSTTSCCTTC
T ss_pred HHHHHHHHHHHHHhC-CCC-ceEEEEEEE--------ECCCccc--cccc----cCCCCCCCCCcCCeEEeCCccCCCCC
Confidence 455799999999999 986 544442221 1110 10 2111 11237788999999999999998 7
Q ss_pred CChhHHHHHHHHHHHHHhc
Q 033665 83 IGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 83 ~Gv~ga~~sg~~~a~~i~~ 101 (114)
.|+++|++||+.+++.|++
T Consensus 407 ~gv~~~~~s~~~~~~~i~~ 425 (425)
T 3ka7_A 407 IEVEGVALGVMSVMEKVLG 425 (425)
T ss_dssp CHHHHHHHHHHHHHHC---
T ss_pred CccHHHHHHHHHHHHHhhC
Confidence 8999999999999998864
No 3
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.58 E-value=9.5e-09 Score=79.64 Aligned_cols=91 Identities=20% Similarity=0.218 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCC-CCceeEEEeCCHHHHHHHhCCCCCCCCCCCCCCCc--CCCCCCCCCCcEEEcCCCCCC
Q 033665 5 SVLKYCVIWRAVERALGPGFC-RDKCDVKFVGTPLTHQRFLRRNRGTYGPAIQAGKE--TFPGHSTPIPQLYCCGDSTFP 81 (114)
Q Consensus 5 K~~~~~~il~~l~~~~gP~i~-~~~I~~~~~~TP~t~~~~~~~~~G~~G~~~~~~q~--~~p~~~t~v~nLyl~G~~~~P 81 (114)
++++.+.+++.|++++ |+.. .+.+ ...+.++.+. ....|+|.... +.+. .++..++|++||||||++++|
T Consensus 362 ~~e~~~~~l~~L~~~~-Pg~~~~~~~-~~~~~~W~~~----~~~~G~~~~~~-~g~~~~~~~~l~~p~~~l~fAG~~t~~ 434 (472)
T 1b37_A 362 DEQTKAEIMQVLRKMF-PGKDVPDAT-DILVPRWWSD----RFYKGTFSNWP-VGVNRYEYDQLRAPVGRVYFTGEHTSE 434 (472)
T ss_dssp HHHHHHHHHHHHHHHC-TTSCCCCCS-EEECCCTTTC----TTTSSSEEECB-TTCCHHHHHHHHCCBTTEEECSGGGCT
T ss_pred HHHHHHHHHHHHHHHc-CCCCCCCCc-eEEecccCCC----CCCCcccCCCC-CCCChhHHHHHhccCCcEEEeecccCC
Confidence 6889999999999999 8751 3433 3445554331 23355543211 1221 124457889999999999988
Q ss_pred --CCChhHHHHHHHHHHHHHhcc
Q 033665 82 --GIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 82 --G~Gv~ga~~sg~~~a~~i~~~ 102 (114)
++++.||+.||+.+|+.|++.
T Consensus 435 ~~~g~v~GA~~SG~~aA~~i~~~ 457 (472)
T 1b37_A 435 HYNGYVHGAYLSGIDSAEILINC 457 (472)
T ss_dssp TTTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHHHHH
Confidence 679999999999999999864
No 4
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.40 E-value=1.1e-07 Score=72.70 Aligned_cols=91 Identities=15% Similarity=0.183 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCceeEEEeCCHHHHHHHhCCCCCCCCCCCCCCCc-CC-CCCCCCCCcEEEcCCCC---
Q 033665 5 SVLKYCVIWRAVERALGPGFCRDKCDVKFVGTPLTHQRFLRRNRGTYGPAIQAGKE-TF-PGHSTPIPQLYCCGDST--- 79 (114)
Q Consensus 5 K~~~~~~il~~l~~~~gP~i~~~~I~~~~~~TP~t~~~~~~~~~G~~G~~~~~~q~-~~-p~~~t~v~nLyl~G~~~--- 79 (114)
++++.+.+++.|+++++++. .+.+.+. +. +|.+. ....|+|.....+.+. .+ +..++|++||||||+++
T Consensus 355 ~~~~~~~~l~~L~~~~~~~~-~~p~~~~-~~---~W~~~-~~~~G~~~~~~~~g~~~~~~~~~~~p~~~l~~aG~~~~~~ 428 (453)
T 2yg5_A 355 AEERKATILASLARYLGPKA-EEPVVYY-ES---DWGSE-EWTRGCYAASFDLGGLHRYGADSRTPVGPIHFSCSDIAAE 428 (453)
T ss_dssp HHHHHHHHHHHHHHHHCGGG-GCCSEEE-EC---CTTTC-TTTCSSSCEEECTTHHHHHGGGTTCCBTTEEECCGGGCST
T ss_pred HHHHHHHHHHHHHHHhCccC-CCccEEE-Ee---ecCCC-CCCCCCCcCcCCCCccccchHHHhCCcCceEEeecccccc
Confidence 56788999999999983333 2222221 11 12111 1234544322222221 11 45678999999999987
Q ss_pred CCCCChhHHHHHHHHHHHHHhcc
Q 033665 80 FPGIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 80 ~PG~Gv~ga~~sg~~~a~~i~~~ 102 (114)
+|| ++.||+.||+.+|+.|++.
T Consensus 429 ~~g-~v~gA~~SG~~aA~~i~~~ 450 (453)
T 2yg5_A 429 GYQ-HVDGAVRMGQRTAADIIAR 450 (453)
T ss_dssp TTT-SHHHHHHHHHHHHHHHHHH
T ss_pred ccc-chHHHHHHHHHHHHHHHHH
Confidence 555 8999999999999999753
No 5
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.35 E-value=1e-07 Score=74.64 Aligned_cols=88 Identities=14% Similarity=0.244 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCceeEEEeCCHHHHHHHh----CCCCCCCCCCCCCCCc-CC-CCCCCCCCcEEEcCCC
Q 033665 5 SVLKYCVIWRAVERALGPGFCRDKCDVKFVGTPLTHQRFL----RRNRGTYGPAIQAGKE-TF-PGHSTPIPQLYCCGDS 78 (114)
Q Consensus 5 K~~~~~~il~~l~~~~gP~i~~~~I~~~~~~TP~t~~~~~----~~~~G~~G~~~~~~q~-~~-p~~~t~v~nLyl~G~~ 78 (114)
++++.+.+++.|++++ |.- . ..+|.+++.+. ....|+|.....+.+. .+ +..++|++||||||++
T Consensus 357 ~~e~~~~vl~~L~~~~-~~~-~-------~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~~~L~fAG~~ 427 (520)
T 1s3e_A 357 KEERLKKLCELYAKVL-GSL-E-------ALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTE 427 (520)
T ss_dssp HHHHHHHHHHHHHHHH-TCG-G-------GGCCSEEEEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCBTTEEECSGG
T ss_pred HHHHHHHHHHHHHHHh-Ccc-c-------cCCccEEEEEeeCCCCCCCCCCccccCCCccccchHHHhCCCCCEEEeehh
Confidence 6788999999999998 531 1 12333322211 2335555422222222 12 4567889999999998
Q ss_pred C---CCCCChhHHHHHHHHHHHHHhcc
Q 033665 79 T---FPGIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 79 ~---~PG~Gv~ga~~sg~~~a~~i~~~ 102 (114)
+ +|| +++||+.||+.+|+.|++.
T Consensus 428 t~~~~~g-~v~GAi~SG~~aA~~i~~~ 453 (520)
T 1s3e_A 428 TATHWSG-YMEGAVEAGERAAREILHA 453 (520)
T ss_dssp GCSSSTT-SHHHHHHHHHHHHHHHHHH
T ss_pred hcCcCcE-EhHHHHHHHHHHHHHHHHH
Confidence 6 655 8999999999999999764
No 6
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.29 E-value=3.7e-07 Score=70.71 Aligned_cols=92 Identities=10% Similarity=0.096 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHhCCC-CCCCceeEEEeCCHHHHHHHhCCCCCCCCCCC-----CCCCc-C-CCCCCCCCCcEEEcC
Q 033665 5 SVLKYCVIWRAVERALGPG-FCRDKCDVKFVGTPLTHQRFLRRNRGTYGPAI-----QAGKE-T-FPGHSTPIPQLYCCG 76 (114)
Q Consensus 5 K~~~~~~il~~l~~~~gP~-i~~~~I~~~~~~TP~t~~~~~~~~~G~~G~~~-----~~~q~-~-~p~~~t~v~nLyl~G 76 (114)
++++.+.+++.|++.+ |+ + ++.++... +.+|.+. ....|+|.... .+.+. . .+..++|.+|||+||
T Consensus 384 ~~~~~~~~l~~L~~~~-~~~~-~~~~~~~~---~~~W~~~-~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~faG 457 (489)
T 2jae_A 384 HRQRLAKAIAEGSEIH-GEKY-TRDISSSF---SGSWRRT-KYSESAWANWAGSGGSHGGAATPEYEKLLEPVDKIYFAG 457 (489)
T ss_dssp HHHHHHHHHHHHHHHH-CGGG-GSSEEEEE---EEEGGGS-TTTSCSSCEETTC-------CCHHHHHHTSCBTTEEECS
T ss_pred HHHHHHHHHHHHHHHc-Ccch-hhhccccE---EEEcCCC-CCCCCcchhcccccCCCcccchhhHHHHhCCCCcEEEeE
Confidence 5788999999999999 87 7 67776543 3336554 23455542211 12211 1 133456789999999
Q ss_pred CCC-CCCCChhHHHHHHHHHHHHHhcc
Q 033665 77 DST-FPGIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 77 ~~~-~PG~Gv~ga~~sg~~~a~~i~~~ 102 (114)
+++ +++++++||+.||+.+|+.|++.
T Consensus 458 ~~~~~~~~~v~gAi~sg~~aA~~i~~~ 484 (489)
T 2jae_A 458 DHLSNAIAWQHGALTSARDVVTHIHER 484 (489)
T ss_dssp GGGBSSTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHhccCccHHHHHHHHHHHHHHHHHHH
Confidence 987 57999999999999999998753
No 7
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.15 E-value=9.6e-06 Score=61.56 Aligned_cols=74 Identities=14% Similarity=0.021 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCceeEEEeCCHHHHHHHhCCCCCCCCCCCCCCCcCCCCCCCCCCcEEEcCCCCCCCCCh-
Q 033665 7 LKYCVIWRAVERALGPGFCRDKCDVKFVGTPLTHQRFLRRNRGTYGPAIQAGKETFPGHSTPIPQLYCCGDSTFPGIGV- 85 (114)
Q Consensus 7 ~~~~~il~~l~~~~gP~i~~~~I~~~~~~TP~t~~~~~~~~~G~~G~~~~~~q~~~p~~~t~v~nLyl~G~~~~PG~Gv- 85 (114)
+..+.+++.|++.+ |.. .++......+ .+-.|. .. .+. . +. .++ +|||+|||++.|++|+
T Consensus 328 ~~~~~~~~~L~~~~-p~~---~~~~~~~~~~-~~p~~~-~~---~~~-------~-~~-~~~-~gl~laGd~~~~~~g~~ 388 (421)
T 3nrn_A 328 KAIEKGWEELLEIF-PEG---EPLLAQVYRD-GNPVNR-TR---AGL-------H-IE-WPL-NEVLVVGDGYRPPGGIE 388 (421)
T ss_dssp HHHHHHHHHHHHHC-TTC---EEEEEEEC-------------------------C-CC-CCC-SSEEECSTTCCCTTCCH
T ss_pred HHHHHHHHHHHHHc-CCC---eEEEeeeccC-CCCccc-cc---CCC-------C-CC-CCC-CcEEEECCcccCCCcee
Confidence 45899999999999 833 3333333321 222210 00 000 1 23 678 9999999999977788
Q ss_pred -hHHHHHHHHHHHHH
Q 033665 86 -PAVAASGAIVANSL 99 (114)
Q Consensus 86 -~ga~~sg~~~a~~i 99 (114)
++|+.||+.||+.|
T Consensus 389 ~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 389 VDGIALGVMKALEKL 403 (421)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred eehHHHHHHHHHHHh
Confidence 99999999999998
No 8
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.77 E-value=2e-06 Score=66.24 Aligned_cols=86 Identities=15% Similarity=0.143 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCceeEEEeCCHHHHHHHhCCCCCC--CCCCCCCCCcCC-CCCCCCCCcEEEcCCCCC
Q 033665 4 LSVLKYCVIWRAVERALGPGFCRDKCDVKFVGTPLTHQRFLRRNRGT--YGPAIQAGKETF-PGHSTPIPQLYCCGDSTF 80 (114)
Q Consensus 4 ~K~~~~~~il~~l~~~~gP~i~~~~I~~~~~~TP~t~~~~~~~~~G~--~G~~~~~~q~~~-p~~~t~v~nLyl~G~~~~ 80 (114)
-++++.+.+++.+++.+ |.. . .++...+ .....+. |...+......+ +..++ ++|||+||+++
T Consensus 385 ~~~~~~~~~~~~l~~~~-~~~-~-~p~~~~~---------~~w~~~~p~~~~g~~~~~~~~~~~~~~-~~~l~~aG~~~- 450 (478)
T 2ivd_A 385 DEDALAALAREELKALA-GVT-A-RPSFTRV---------FRWPLGIPQYNLGHLERVAAIDAALQR-LPGLHLIGNAY- 450 (478)
T ss_dssp CHHHHHHHHHHHHHHHH-CCC-S-CCSEEEE---------EEESSCCBCCBTTHHHHHHHHHHHHHT-STTEEECSTTT-
T ss_pred CHHHHHHHHHHHHHHHh-CCC-C-CCcEEEE---------EECCCcccCCCcCHHHHHHHHHHHHhh-CCCEEEEccCC-
Confidence 36789999999999999 755 3 2222211 1111121 222110000001 11122 78999999998
Q ss_pred CCCChhHHHHHHHHHHHHHhccc
Q 033665 81 PGIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 81 PG~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
+|.|+.+|+.||+.+|+.|++..
T Consensus 451 ~g~gv~gA~~SG~~aA~~i~~~l 473 (478)
T 2ivd_A 451 KGVGLNDCIRNAAQLADALVAGN 473 (478)
T ss_dssp SCCSHHHHHHHHHHHHHHHCC--
T ss_pred CCCCHHHHHHHHHHHHHHHHHhh
Confidence 58999999999999999998753
No 9
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.51 E-value=0.00034 Score=51.53 Aligned_cols=80 Identities=19% Similarity=0.206 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCceeEEEeCCHHHHHHHh-CCCCCCCCCCCCCCCcCCCCCC--CCCCcEEEcCCCCCC
Q 033665 5 SVLKYCVIWRAVERALGPGFCRDKCDVKFVGTPLTHQRFL-RRNRGTYGPAIQAGKETFPGHS--TPIPQLYCCGDSTFP 81 (114)
Q Consensus 5 K~~~~~~il~~l~~~~gP~i~~~~I~~~~~~TP~t~~~~~-~~~~G~~G~~~~~~q~~~p~~~--t~v~nLyl~G~~~~P 81 (114)
.+++.+.+++.+++.+ +.. .+ .++..+. |+. ..+. |+... .+... ...+||++||+|..
T Consensus 259 ~~~~~~~~~~~l~~~~-g~~-~~-p~~~~v~------rW~~a~p~--~~~~~------~~~~~~~~~~~~l~laGd~~~- 320 (342)
T 3qj4_A 259 IEDVQELVFQQLENIL-PGL-PQ-PIATKCQ------KWRHSQVT--NAAAN------CPGQMTLHHKPFLACGGDGFT- 320 (342)
T ss_dssp HHHHHHHHHHHHHHHS-CSC-CC-CSEEEEE------EETTCSBS--SCCSS------SCSCEEEETTTEEEECSGGGS-
T ss_pred HHHHHHHHHHHHHHhc-cCC-CC-Cceeeec------cccccccc--cccCC------CcceeEecCCccEEEEccccC-
Confidence 6789999999999998 544 22 2322221 111 1111 32210 12222 35789999999998
Q ss_pred CCChhHHHHHHHHHHHHHhcc
Q 033665 82 GIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 82 G~Gv~ga~~sg~~~a~~i~~~ 102 (114)
|.|+++|+.||+.+|+.|+..
T Consensus 321 g~~v~~ai~sg~~aa~~i~~~ 341 (342)
T 3qj4_A 321 QSNFDGCITSALCVLEALKNY 341 (342)
T ss_dssp CSSHHHHHHHHHHHHHHHTTC
T ss_pred CCCccHHHHHHHHHHHHHHhh
Confidence 889999999999999999763
No 10
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.22 E-value=0.0002 Score=48.39 Aligned_cols=36 Identities=28% Similarity=0.308 Sum_probs=31.6
Q ss_pred CCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhcc
Q 033665 66 STPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 66 ~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~ 102 (114)
.+..+++|+|||++. |+|+.+|+.||+.+|+.|.+.
T Consensus 291 ~~~~~~v~l~GDa~~-g~gv~~A~~sG~~aA~~I~~~ 326 (336)
T 3kkj_A 291 SDADLGIYVCGDWCL-SGRVEGAWLSGQEAARRLLEH 326 (336)
T ss_dssp EETTTTEEECCGGGT-TSSHHHHHHHHHHHHHHHHHH
T ss_pred eeCCCCEEEEecccC-CcCHHHHHHHHHHHHHHHHHH
Confidence 345789999999988 889999999999999999753
No 11
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.00 E-value=7.8e-05 Score=57.69 Aligned_cols=91 Identities=9% Similarity=-0.013 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCce----eEEEeCCHHHHHHHhCCCCCCCCCCCCCCCcC-C-CCCCCCCCcEEEcCCC
Q 033665 5 SVLKYCVIWRAVERALGPGFCRDKC----DVKFVGTPLTHQRFLRRNRGTYGPAIQAGKET-F-PGHSTPIPQLYCCGDS 78 (114)
Q Consensus 5 K~~~~~~il~~l~~~~gP~i~~~~I----~~~~~~TP~t~~~~~~~~~G~~G~~~~~~q~~-~-p~~~t~v~nLyl~G~~ 78 (114)
.+++.+.+++.|++.+ + +..+.+ ....+ .+|.+ .....|+|... .+.+.. + +..++|.+|||+||..
T Consensus 386 ~~~~~~~~l~~L~~~~-g-~~~~~~~~~~~~~~~---~~W~~-~p~~~G~~~~~-~~~~~~~~~~~l~~p~~~l~fAGe~ 458 (498)
T 2iid_A 386 FKDCADIVFNDLSLIH-Q-LPKKDIQSFCYPSVI---QKWSL-DKYAMGGITTF-TPYQFQHFSDPLTASQGRIYFAGEY 458 (498)
T ss_dssp HHHHHHHHHHHHHHHH-T-CCHHHHHHHEEEEEE---EEGGG-CTTTCSSEECC-CTTHHHHHHHHHHCCBTTEEECSGG
T ss_pred HHHHHHHHHHHHHHHc-C-CChhhhhhhcCccEE---EecCC-CCCCCceeeec-CCcchHHHHHHHhCCCCcEEEEEcc
Confidence 4568899999999998 4 311111 11111 11322 12234444211 111211 1 2335578999999999
Q ss_pred CCC-CCChhHHHHHHHHHHHHHhcc
Q 033665 79 TFP-GIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 79 ~~P-G~Gv~ga~~sg~~~a~~i~~~ 102 (114)
+.+ .+++.||+.||+.+|+.|++.
T Consensus 459 t~~~~g~~~GAi~SG~raA~~i~~~ 483 (498)
T 2iid_A 459 TAQAHGWIDSTIKSGLRAARDVNLA 483 (498)
T ss_dssp GSSSSSCHHHHHHHHHHHHHHHHHH
T ss_pred cccCCcCHHHHHHHHHHHHHHHHHH
Confidence 843 457899999999999999764
No 12
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=96.73 E-value=0.00088 Score=51.72 Aligned_cols=87 Identities=13% Similarity=0.111 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCceeEEEeCCHHHHHHHhCCCCCCCCCCCCCCCcCCCCCCCCCCcEEEcCCCCCCCCC
Q 033665 5 SVLKYCVIWRAVERALGPGFCRDKCDVKFVGTPLTHQRFLRRNRGTYGPAIQAGKETFPGHSTPIPQLYCCGDSTFPGIG 84 (114)
Q Consensus 5 K~~~~~~il~~l~~~~gP~i~~~~I~~~~~~TP~t~~~~~~~~~G~~G~~~~~~q~~~p~~~t~v~nLyl~G~~~~PG~G 84 (114)
.+++.+.+++.|++++ +.- . ..+...+.. |.+-+..+.+.|+.. . ..+....++++|||+||+++. |.|
T Consensus 406 ~ee~~~~v~~~L~~~~-g~~-~-~p~~~~~~~---w~~~~p~~~~g~~~~--~--~~~~~~~~~~~~l~~aG~~~~-g~~ 474 (504)
T 1sez_A 406 RTELKEIVTSDLKQLL-GAE-G-EPTYVNHLY---WSKAFPLYGHNYDSV--L--DAIDKMEKNLPGLFYAGNHRG-GLS 474 (504)
T ss_dssp HHHHHHHHHHHHHHHH-CBC-S-CCSSEEEEE---EEEEEECCCTTHHHH--H--HHHHHHHHHSTTEEECCSSSS-CSS
T ss_pred HHHHHHHHHHHHHHHh-CCC-C-CCeEEEEeE---CCCCCCccCcCHHHH--H--HHHHHHHHhCCCEEEEeecCC-CCC
Confidence 5788999999999998 532 1 111111110 110001111111100 0 001123456899999999987 889
Q ss_pred hhHHHHHHHHHHHHHhcc
Q 033665 85 VPAVAASGAIVANSLVSV 102 (114)
Q Consensus 85 v~ga~~sg~~~a~~i~~~ 102 (114)
+.+|+.||+.+|+.|++.
T Consensus 475 v~gai~sG~~aA~~il~~ 492 (504)
T 1sez_A 475 VGKALSSGCNAADLVISY 492 (504)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999999764
No 13
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=96.62 E-value=0.0013 Score=50.35 Aligned_cols=38 Identities=26% Similarity=0.440 Sum_probs=32.5
Q ss_pred CCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhcccch
Q 033665 67 TPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVSQH 105 (114)
Q Consensus 67 t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~~~~ 105 (114)
++++|||+||++.. |.|+++|+.||+.+|+.|+..-..
T Consensus 430 ~~~~~l~~aG~~~~-g~g~~~a~~sG~~aA~~i~~~l~~ 467 (475)
T 3lov_A 430 AQYPGIYLAGLAYD-GVGLPDCVASAKTMIESIELEQSH 467 (475)
T ss_dssp HHSTTEEECSTTTS-CSSHHHHHHHHHHHHHHHHHTC--
T ss_pred hhCCCEEEEccCCC-CCCHHHHHHHHHHHHHHHHHHhhc
Confidence 46789999999987 889999999999999999876544
No 14
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=96.56 E-value=0.0019 Score=49.30 Aligned_cols=34 Identities=26% Similarity=0.265 Sum_probs=30.4
Q ss_pred CCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhccc
Q 033665 69 IPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 69 v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
-+|||+||+|. .|.|+++|+.||+.+|+.|++++
T Consensus 441 ~~~l~l~G~~~-~G~gv~~a~~sg~~aA~~il~~~ 474 (477)
T 3nks_A 441 RLPLTLAGASY-EGVAVNDCIESGRQAAVSVLGTE 474 (477)
T ss_dssp TCSEEECSTTT-SCCSHHHHHHHHHHHHHHHHHCC
T ss_pred CCCEEEEccCC-CCCcHHHHHHHHHHHHHHHHhcc
Confidence 36899999996 59999999999999999998764
No 15
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=96.51 E-value=0.0016 Score=49.37 Aligned_cols=35 Identities=23% Similarity=0.497 Sum_probs=31.0
Q ss_pred CCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhcc
Q 033665 67 TPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 67 t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~ 102 (114)
++++|||+||++.. |.|+.+|+.||+.+|+.|+..
T Consensus 433 ~~~~~l~~aG~~~~-g~gv~~a~~sG~~aA~~i~~~ 467 (470)
T 3i6d_A 433 SAYPGVYMTGASFE-GVGIPDCIDQGKAAVSDALTY 467 (470)
T ss_dssp HHSTTEEECSTTTS-CCSHHHHHHHHHHHHHHHHHH
T ss_pred hhCCCEEEEeecCC-CCCHHHHHHHHHHHHHHHHHH
Confidence 45789999999986 889999999999999998753
No 16
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=95.83 E-value=0.024 Score=42.58 Aligned_cols=85 Identities=11% Similarity=-0.010 Sum_probs=50.5
Q ss_pred HHHHHHHHHHhCCCCCCCceeEEEeCCHHHHHHHhCCCCCCCCCCCCCCCc-C-CCCCCCCCCcEEEcCCCCC--CCCCh
Q 033665 10 CVIWRAVERALGPGFCRDKCDVKFVGTPLTHQRFLRRNRGTYGPAIQAGKE-T-FPGHSTPIPQLYCCGDSTF--PGIGV 85 (114)
Q Consensus 10 ~~il~~l~~~~gP~i~~~~I~~~~~~TP~t~~~~~~~~~G~~G~~~~~~q~-~-~p~~~t~v~nLyl~G~~~~--PG~Gv 85 (114)
+.+.+.+++++ |++ . .+..... .|.+. ....|+|... .+.+. . .+..+.|+.+|||+|..+. ..+=+
T Consensus 338 ~~~~~~l~~~~-~~~-~--~~~~~~~---~W~~d-~~~~G~~~~~-~~g~~~~~~~~l~~p~g~~~fAGe~t~~~~~g~~ 408 (431)
T 3k7m_X 338 GAVKDAVLYYL-PEV-E--VLGIDYH---DWIAD-PLFEGPWVAP-RVGQFSRVHKELGEPAGRIHFVGSDVSLEFPGYI 408 (431)
T ss_dssp HHHHHHHHHHC-TTC-E--EEEEECC---CTTTC-TTTSSSSCCC-CTTTTTTSSGGGGSCBTTEEECSGGGCSSSTTSH
T ss_pred HHHHHHHHHhc-CCC-C--ccEeEec---ccCCC-CCCCCCCCCc-CCCCCcccHHHHhCCCCcEEEEehhhhccCCeEe
Confidence 35667788887 987 4 2221111 13221 2335665332 23332 1 2445678899999994432 23457
Q ss_pred hHHHHHHHHHHHHHhccc
Q 033665 86 PAVAASGAIVANSLVSVS 103 (114)
Q Consensus 86 ~ga~~sg~~~a~~i~~~~ 103 (114)
.||+.||..+|+.|+..-
T Consensus 409 ~GA~~sg~raa~~i~~~~ 426 (431)
T 3k7m_X 409 EGALETAECAVNAILHSH 426 (431)
T ss_dssp HHHHHHHHHHHHHHHHC-
T ss_pred hHHHHHHHHHHHHHHhhh
Confidence 899999999999998753
No 17
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=95.56 E-value=0.048 Score=44.09 Aligned_cols=92 Identities=21% Similarity=0.268 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCceeEEEeCCHHHHHHHhCCCCCCCCCCCCCCCc-------CCC--------CCCCCC
Q 033665 5 SVLKYCVIWRAVERALGPGFCRDKCDVKFVGTPLTHQRFLRRNRGTYGPAIQAGKE-------TFP--------GHSTPI 69 (114)
Q Consensus 5 K~~~~~~il~~l~~~~gP~i~~~~I~~~~~~TP~t~~~~~~~~~G~~G~~~~~~q~-------~~p--------~~~t~v 69 (114)
.++..+.+++.|++++|+.. ....+...+.. |.+ .....|+|... .+.+. .-| ..+++.
T Consensus 549 dee~~~~~l~~L~~~~g~~~-~~~p~~~~v~~---W~~-dp~~~Gsys~~-~pg~~~~~~~~l~~p~~~~~~~~~~~~~~ 622 (662)
T 2z3y_A 549 DDVIVGRCLAILKGIFGSSA-VPQPKETVVSR---WRA-DPWARGSYSYV-AAGSSGNDYDLMAQPITPGPSIPGAPQPI 622 (662)
T ss_dssp HHHHHHHHHHHHHHHHCTTS-SCCCSEEEECC---TTT-CTTTSSSCEEC-BTTCCTHHHHHHHCCBCC---------CC
T ss_pred HHHHHHHHHHHHHHHhCCcc-cCCCceeEEEE---ECC-CCCCCcccccC-CCCCchhhHHHHhCcCccccccccccCCC
Confidence 45678889999999984322 22333333321 333 12345554321 11111 001 224567
Q ss_pred CcEEEcCCCCCC--CCChhHHHHHHHHHHHHHhcc
Q 033665 70 PQLYCCGDSTFP--GIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 70 ~nLyl~G~~~~P--G~Gv~ga~~sg~~~a~~i~~~ 102 (114)
.+|||+|..+.+ .+-+.||+.||..+|+.|++.
T Consensus 623 grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~~ 657 (662)
T 2z3y_A 623 PRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQ 657 (662)
T ss_dssp CCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 899999999864 356889999999999998753
No 18
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=95.21 E-value=0.014 Score=42.21 Aligned_cols=35 Identities=26% Similarity=0.276 Sum_probs=31.4
Q ss_pred CCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhccc
Q 033665 68 PIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 68 ~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
+.++|++|||+++ |+|+.+++.+|..+|+.|.+..
T Consensus 293 ~~~rl~laGDa~~-g~gv~~a~~sg~~lA~~l~~~~ 327 (336)
T 1yvv_A 293 ADLGIYVCGDWCL-SGRVEGAWLSGQEAARRLLEHL 327 (336)
T ss_dssp TTTTEEECCGGGT-TSSHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEecCCC-CCCHHHHHHHHHHHHHHHHHHh
Confidence 4589999999999 7899999999999999987653
No 19
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=95.14 E-value=0.021 Score=47.41 Aligned_cols=91 Identities=11% Similarity=0.003 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCceeEEEeCCHHHHHHHhCCCCCCCCCCCCCCCcC--CCCCCCC-CCcEEEcCCCCCC
Q 033665 5 SVLKYCVIWRAVERALGPGFCRDKCDVKFVGTPLTHQRFLRRNRGTYGPAIQAGKET--FPGHSTP-IPQLYCCGDSTFP 81 (114)
Q Consensus 5 K~~~~~~il~~l~~~~gP~i~~~~I~~~~~~TP~t~~~~~~~~~G~~G~~~~~~q~~--~p~~~t~-v~nLyl~G~~~~P 81 (114)
.+++.+.+++.|.+.+|+.- ....+...+.. |.+- ....|+|.... +.+.. +.....| ..+|||+|..+++
T Consensus 680 deel~~~~l~~L~~ifg~~~-~~~P~~~~vt~---W~~d-p~s~Gsys~~~-~g~~~~~~~~L~~p~~grL~FAGE~Ts~ 753 (776)
T 4gut_A 680 DKQVLQQCMATLRELFKEQE-VPDPTKYFVTR---WSTD-PWIQMAYSFVK-TGGSGEAYDIIAEDIQGTVFFAGEATNR 753 (776)
T ss_dssp HHHHHHHHHHHHHHHTTTSC-CCCCSEEEECC---GGGC-TTTCCSEEEEB-TTCCTHHHHHHHCCBTTTEEECSGGGCS
T ss_pred HHHHHHHHHHHHHHHhCccc-ccCcceEEEec---CCCC-CccCCCCCccC-CCCchhHHHHHhCcCCCcEEEEehhhcC
Confidence 45788899999999994322 22233333321 3331 23455543211 11110 1111234 3789999999864
Q ss_pred --CCChhHHHHHHHHHHHHHhc
Q 033665 82 --GIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 82 --G~Gv~ga~~sg~~~a~~i~~ 101 (114)
.+-+.||+.||..+|+.|+.
T Consensus 754 ~~~gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 754 HFPQTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp SSCSSHHHHHHHHHHHHHHHHC
T ss_pred CCCcCHHHHHHHHHHHHHHHHh
Confidence 24588999999999999875
No 20
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=94.84 E-value=0.016 Score=44.63 Aligned_cols=86 Identities=10% Similarity=0.022 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHhCCCCCCCceeEEEeCCHHHHHHHhCCCCCCCCCCCCCCCc-C-CCCCCCCCCcEEEcCCCCCC--CCC
Q 033665 9 YCVIWRAVERALGPGFCRDKCDVKFVGTPLTHQRFLRRNRGTYGPAIQAGKE-T-FPGHSTPIPQLYCCGDSTFP--GIG 84 (114)
Q Consensus 9 ~~~il~~l~~~~gP~i~~~~I~~~~~~TP~t~~~~~~~~~G~~G~~~~~~q~-~-~p~~~t~v~nLyl~G~~~~P--G~G 84 (114)
.+.+++.|++.+ |+. . .+....+.. |.+. ....|+|... .+.+. . .+..++|.+|||+||+++.+ .+-
T Consensus 395 ~~~~~~~L~~~~-~~~-~-~~~~~~~~~---W~~d-p~~~g~y~~~-~~g~~~~~~~~l~~p~~~l~fAGe~t~~~~~g~ 466 (495)
T 2vvm_A 395 VRETLKAVGQLA-PGT-F-GVKRLVFHN---WVKD-EFAKGAWFFS-RPGMVSECLQGLREKHGGVVFANSDWALGWRSF 466 (495)
T ss_dssp HHHHHHHHHTTS-TTS-C-CEEEEEECC---TTTC-TTTSSSSCCC-CTTHHHHHHHHHHCCBTTEEECCGGGCSSSTTS
T ss_pred HHHHHHHHHHhc-CCC-C-CceEEEEeE---cCCC-CCCCCCccCc-CCCcchhhHHHHhCcCCCEEEechhhhcCCceE
Confidence 466788888887 864 3 233332221 2211 1123444321 11111 1 12234678999999999753 356
Q ss_pred hhHHHHHHHHHHHHHhcc
Q 033665 85 VPAVAASGAIVANSLVSV 102 (114)
Q Consensus 85 v~ga~~sg~~~a~~i~~~ 102 (114)
+.||+.||+.+|+.|+..
T Consensus 467 veGAi~SG~raA~~i~~~ 484 (495)
T 2vvm_A 467 IDGAIEEGTRAARVVLEE 484 (495)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred EEhHHHHHHHHHHHHHHH
Confidence 889999999999999764
No 21
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=94.72 E-value=0.042 Score=46.12 Aligned_cols=92 Identities=21% Similarity=0.281 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCceeEEEeCCHHHHHHHhCCCCCCCCCCCCCCCc-------C--------CCCCCCCC
Q 033665 5 SVLKYCVIWRAVERALGPGFCRDKCDVKFVGTPLTHQRFLRRNRGTYGPAIQAGKE-------T--------FPGHSTPI 69 (114)
Q Consensus 5 K~~~~~~il~~l~~~~gP~i~~~~I~~~~~~TP~t~~~~~~~~~G~~G~~~~~~q~-------~--------~p~~~t~v 69 (114)
.+++.+.+++.|.+++|+.. ....+...+.. |.+ .....|+|... .+.+. . .|..+.+.
T Consensus 720 deel~~~~l~~L~~ifG~~~-~~~P~~~~vtr---W~~-dp~s~GsYs~~-~pG~~~~~~~~L~~P~~~~~~~p~~~~~~ 793 (852)
T 2xag_A 720 DDVIVGRCLAILKGIFGSSA-VPQPKETVVSR---WRA-DPWARGSYSYV-AAGSSGNDYDLMAQPITPGPSIPGAPQPI 793 (852)
T ss_dssp HHHHHHHHHHHHHHHHCTTT-CCCCSEEEECC---TTT-CTTTSSSCEEC-BTTCCTTHHHHTTSCBCCCCSSTTCCCCC
T ss_pred HHHHHHHHHHHHHHHhCccc-cCCceEEEEEe---cCC-CCCcCcccccc-CCCcchhhHHHHhCccccccccccccCCC
Confidence 46778899999999994322 22333333322 333 12334554211 11110 0 02235567
Q ss_pred CcEEEcCCCCCC--CCChhHHHHHHHHHHHHHhcc
Q 033665 70 PQLYCCGDSTFP--GIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 70 ~nLyl~G~~~~P--G~Gv~ga~~sg~~~a~~i~~~ 102 (114)
.+|||+|..+.+ .+-+.||+.||..+|+.|+..
T Consensus 794 grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~~ 828 (852)
T 2xag_A 794 PRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQ 828 (852)
T ss_dssp CCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 899999999753 357889999999999999764
No 22
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=94.70 E-value=0.024 Score=38.90 Aligned_cols=93 Identities=10% Similarity=0.018 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCceeEEEeCCHHHHHHHhCCCCCCCCCCCCCCCc-CC-CCCCCCCCcEEEcCCCCCCCC
Q 033665 6 VLKYCVIWRAVERALGPGFCRDKCDVKFVGTPLTHQRFLRRNRGTYGPAIQAGKE-TF-PGHSTPIPQLYCCGDSTFPGI 83 (114)
Q Consensus 6 ~~~~~~il~~l~~~~gP~i~~~~I~~~~~~TP~t~~~~~~~~~G~~G~~~~~~q~-~~-p~~~t~v~nLyl~G~~~~PG~ 83 (114)
++..+.+++.|++++||++ +....+..+. .+|.+. ....|+|... .+.+. .+ +..+.|..+|||+|..+....
T Consensus 57 ~e~~~~~l~~L~~~~g~~~-~~~~~~~~~~--~~W~~d-p~~~Ga~s~~-~pg~~~~~~~~l~~p~grl~FAGe~ts~~~ 131 (181)
T 2e1m_C 57 AERYGYALENLQSVHGRRI-EVFYTGAGQT--QSWLRD-PYACGEAAVY-TPHQMTAFHLDVVRPEGPVYFAGEHVSLKH 131 (181)
T ss_dssp TTTHHHHHHHHHHHHCGGG-GGTEEEEEEE--EESSSC-TTTSSSEECC-CTTHHHHHHHHHHSCBTTEEECSGGGTTST
T ss_pred HHHHHHHHHHHHHHhCCCc-HhhccCccee--cccCCC-CCCCCcccCc-CCCchHHHHHHHhCCCCcEEEEEHHHcCCc
Confidence 4567889999999998776 3322220011 112221 1233444221 12221 11 233456789999999976344
Q ss_pred C-hhHHHHHHHHHHHHHhccc
Q 033665 84 G-VPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 84 G-v~ga~~sg~~~a~~i~~~~ 103 (114)
| +.||+.||..+|+.|+...
T Consensus 132 g~~eGAl~SG~raA~~i~~~l 152 (181)
T 2e1m_C 132 AWIEGAVETAVRAAIAVNEAP 152 (181)
T ss_dssp TSHHHHHHHHHHHHHHHHTCC
T ss_pred cCHHHHHHHHHHHHHHHHHHh
Confidence 4 7799999999999999764
No 23
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=92.14 E-value=0.19 Score=35.98 Aligned_cols=38 Identities=24% Similarity=0.438 Sum_probs=29.9
Q ss_pred CCCCCCCcEEEcCCCCCCC-CChhHHHHHHHHHHHHHhc
Q 033665 64 GHSTPIPQLYCCGDSTFPG-IGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~~PG-~Gv~ga~~sg~~~a~~i~~ 101 (114)
..+|.+||+|.+||.+.++ .-++-|+..|+.||..+.+
T Consensus 265 ~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~ 303 (312)
T 4gcm_A 265 DMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAE 303 (312)
T ss_dssp TSBCSSTTEEECSTTBSCSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCEEEEeecCCCcchHHHHHHHHHHHHHHHHHH
Confidence 4578899999999998533 4567788889999988853
No 24
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=92.03 E-value=0.18 Score=35.93 Aligned_cols=36 Identities=25% Similarity=0.270 Sum_probs=27.6
Q ss_pred CCCCCCcEEEcCCCCC-CCCChhHHHHHHHHHHHHHh
Q 033665 65 HSTPIPQLYCCGDSTF-PGIGVPAVAASGAIVANSLV 100 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~-PG~Gv~ga~~sg~~~a~~i~ 100 (114)
.+|.+||+|.+||.+. |+.=+..|+..|+.||..+.
T Consensus 272 ~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~~~ 308 (314)
T 4a5l_A 272 PKTSVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCE 308 (314)
T ss_dssp TBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEEEeccCCcchHHHHHHHHHHHHHHHHH
Confidence 5789999999999875 33346667778888887663
No 25
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=91.80 E-value=0.06 Score=43.00 Aligned_cols=38 Identities=16% Similarity=0.231 Sum_probs=33.0
Q ss_pred CCC-CCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhcc
Q 033665 65 HST-PIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 65 ~~t-~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~ 102 (114)
..+ .++|||.||+++--.+|+..|.+.|..+|+.|++.
T Consensus 503 ~~~~~~~gly~~GegaG~a~gi~~Aa~~G~~~a~~i~~~ 541 (549)
T 3nlc_A 503 FQSVNLKGFYPAGEGAGYAGGILSAGIDGIKVAEAVARD 541 (549)
T ss_dssp TSCTTCBTEEECHHHHTSCCSHHHHHHHHHHHHHHHHHH
T ss_pred ceECCcCCEEEccccCChhhHHHHHHHHHHHHHHHHHHH
Confidence 345 59999999999755789999999999999999765
No 26
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=90.34 E-value=0.15 Score=36.51 Aligned_cols=38 Identities=24% Similarity=0.258 Sum_probs=29.0
Q ss_pred CCCCCCCcEEEcCCCCCCC-CChhHHHHHHHHHHHHHhc
Q 033665 64 GHSTPIPQLYCCGDSTFPG-IGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~~PG-~Gv~ga~~sg~~~a~~i~~ 101 (114)
..+|.+||+|.+||.+.++ .-+.-|+..|+.||..|.+
T Consensus 259 ~~~Ts~p~IyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~ 297 (304)
T 4fk1_A 259 FGRTSEKNIYLAGETTTQGPSSLIIAASQGNKAAIAINS 297 (304)
T ss_dssp TCBCSSTTEEECSHHHHTSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCEEEEeccCCCcchHHHHHHHHHHHHHHHHHH
Confidence 3578899999999987433 3467777889998877743
No 27
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=90.27 E-value=0.21 Score=37.36 Aligned_cols=32 Identities=9% Similarity=0.107 Sum_probs=25.9
Q ss_pred CCCCcEEEcCCCCCCCCCh-hHHHHHHHHHHHHHh
Q 033665 67 TPIPQLYCCGDSTFPGIGV-PAVAASGAIVANSLV 100 (114)
Q Consensus 67 t~v~nLyl~G~~~~PG~Gv-~ga~~sg~~~a~~i~ 100 (114)
.+.+|||+||+++. .|+ -+++.||..+|+.++
T Consensus 391 ~~~~~l~~aG~~~~--~g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 391 QGRRNTFYAGEIMS--FGNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp TTGGGEEECSGGGS--CSSHHHHHHHHHHHHHHHT
T ss_pred hCCCCceEeccccc--cccHHHHHHHHHHHHHHhc
Confidence 34689999999886 344 488899999999886
No 28
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=90.08 E-value=0.31 Score=34.15 Aligned_cols=37 Identities=22% Similarity=0.411 Sum_probs=29.1
Q ss_pred CCCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhc
Q 033665 65 HSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~ 101 (114)
.+|.++|+|.+||.+.....+..|+..|+.+|..+..
T Consensus 253 ~~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~ 289 (297)
T 3fbs_A 253 KQTTARGIFACGDVARPAGSVALAVGDGAMAGAAAHR 289 (297)
T ss_dssp CBCSSTTEEECSGGGCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEEeecCCchHHHHHHHHhHHHHHHHHHH
Confidence 4678999999999987334666778888888887754
No 29
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=89.90 E-value=0.43 Score=33.71 Aligned_cols=38 Identities=29% Similarity=0.350 Sum_probs=29.7
Q ss_pred CCCCCCcEEEcCCCCCC---CCChhHHHHHHHHHHHHHhcc
Q 033665 65 HSTPIPQLYCCGDSTFP---GIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~P---G~Gv~ga~~sg~~~a~~i~~~ 102 (114)
.+|.++|+|.+||.+.. ...+..++..|+.+|..+...
T Consensus 275 ~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 315 (323)
T 3f8d_A 275 MRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRY 315 (323)
T ss_dssp CBCSSTTEEECSTTBSTTTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred ceecCCCEEEcceecCCCCcccceeehhhHHHHHHHHHHHH
Confidence 46789999999999862 356677888899988887653
No 30
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=89.82 E-value=0.22 Score=34.63 Aligned_cols=34 Identities=24% Similarity=0.261 Sum_probs=27.3
Q ss_pred CCCCcEEEcCCCCCCCCChhHH-HHHHHHHHHHHhcc
Q 033665 67 TPIPQLYCCGDSTFPGIGVPAV-AASGAIVANSLVSV 102 (114)
Q Consensus 67 t~v~nLyl~G~~~~PG~Gv~ga-~~sg~~~a~~i~~~ 102 (114)
|.+||+|.+|+.+ +.|+.++ +.+|+.+|..|+++
T Consensus 196 t~~p~iya~G~~a--~~g~~~~~~~~g~~~a~~i~~~ 230 (232)
T 2cul_A 196 KRLEGLYAVGLCV--REGDYARMSEEGKRLAEHLLHE 230 (232)
T ss_dssp TTSBSEEECGGGT--SCCCHHHHHHHHHHHHHHHHHH
T ss_pred cccccceeeeecc--cCccHHHHHHHHHHHHHHHHhh
Confidence 5799999999999 4555544 68999999988754
No 31
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=89.77 E-value=0.14 Score=37.35 Aligned_cols=39 Identities=21% Similarity=0.297 Sum_probs=27.3
Q ss_pred CCCCCCCcEEEcCCCC---CC--CCC-hhH-HHHHHHHHHHHHhcc
Q 033665 64 GHSTPIPQLYCCGDST---FP--GIG-VPA-VAASGAIVANSLVSV 102 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~---~P--G~G-v~g-a~~sg~~~a~~i~~~ 102 (114)
..+|.+||+|.+||.+ ++ .-| +.+ .+.||+.||+.|++.
T Consensus 278 ~~~t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~ 323 (326)
T 3fpz_A 278 GAYAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKH 323 (326)
T ss_dssp EECTTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHH
T ss_pred CeEECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHH
Confidence 3468899999999864 22 212 334 456999999998753
No 32
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=89.73 E-value=0.33 Score=37.60 Aligned_cols=35 Identities=17% Similarity=0.167 Sum_probs=28.9
Q ss_pred CCCcEEEcCCCCCC-CC-ChhHHHHHHHHHHHHHhcc
Q 033665 68 PIPQLYCCGDSTFP-GI-GVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 68 ~v~nLyl~G~~~~P-G~-Gv~ga~~sg~~~a~~i~~~ 102 (114)
+..+|||||..+.+ .. =+.||+.||..+|+.|+..
T Consensus 470 ~~~rl~FAGe~ts~~~~g~v~GA~~SG~raA~~i~~~ 506 (516)
T 1rsg_A 470 QDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDL 506 (516)
T ss_dssp SSSSEEECSTTSCSTTBTSHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEeccccccCCCccchhHHHHHHHHHHHHHHH
Confidence 56789999999854 33 4579999999999999764
No 33
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=89.23 E-value=0.29 Score=34.90 Aligned_cols=37 Identities=22% Similarity=0.228 Sum_probs=29.4
Q ss_pred CCCCCcEEEcCCCCCC-CCChhHHHHHHHHHHHHHhcc
Q 033665 66 STPIPQLYCCGDSTFP-GIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 66 ~t~v~nLyl~G~~~~P-G~Gv~ga~~sg~~~a~~i~~~ 102 (114)
+|.++|+|.+||.+.+ ...+..|+..|+.||..+...
T Consensus 296 ~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 333 (338)
T 3itj_A 296 LTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAEKY 333 (338)
T ss_dssp BCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEeeccCCCCccceeeehhhhHHHHHHHHHH
Confidence 5679999999999863 356677888999999887643
No 34
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=89.22 E-value=0.69 Score=34.15 Aligned_cols=77 Identities=18% Similarity=0.052 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCceeEEEeCCHHHHHHHh--CCCCCC--CCCCCCCCCcCCCCCCCCCCcEEEcCCCCCCC
Q 033665 7 LKYCVIWRAVERALGPGFCRDKCDVKFVGTPLTHQRFL--RRNRGT--YGPAIQAGKETFPGHSTPIPQLYCCGDSTFPG 82 (114)
Q Consensus 7 ~~~~~il~~l~~~~gP~i~~~~I~~~~~~TP~t~~~~~--~~~~G~--~G~~~~~~q~~~p~~~t~v~nLyl~G~~~~PG 82 (114)
+..+.+++.+.+++ |++ .+.+....... +. ..+.+. +|.. |...+..+|||++.. |
T Consensus 295 ~~~~~l~~~~~~~~-p~l-~~~~~~~~~g~------~~~p~t~D~~p~ig~~--------~~~~~~~~~l~~a~G----g 354 (397)
T 2oln_A 295 RQMDRLSGWLRDHL-PTV-DPDPVRTSTCL------AVLPTDPERQFFLGTA--------RDLMTHGEKLVVYGA----G 354 (397)
T ss_dssp HHHHHHHHHHHHHC-TTB-CSSCSEEEEEE------EEEESSTTCCCEEEES--------TTTSTTGGGEEEEEE----S
T ss_pred HHHHHHHHHHHHhC-CCC-CCCceeEEEEE------ecCCcCCCCCeEeecC--------CccccCCCCEEEEeC----c
Confidence 45678889999999 998 55544322111 00 112222 1110 211123789998866 6
Q ss_pred CChhHHHHHHHHHHHHHhccc
Q 033665 83 IGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 83 ~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
.|+..+...|+.+|+.|++.+
T Consensus 355 ~G~~~ap~~g~~la~~i~~~~ 375 (397)
T 2oln_A 355 WAFKFVPLFGRICADLAVEDS 375 (397)
T ss_dssp SCGGGHHHHHHHHHHHHHHSC
T ss_pred chhhccHHHHHHHHHHHhCCC
Confidence 799999999999999998764
No 35
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=89.07 E-value=0.38 Score=33.98 Aligned_cols=38 Identities=26% Similarity=0.305 Sum_probs=30.0
Q ss_pred CCCCCCCcEEEcCCCCC-CCCChhHHHHHHHHHHHHHhc
Q 033665 64 GHSTPIPQLYCCGDSTF-PGIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~~-PG~Gv~ga~~sg~~~a~~i~~ 101 (114)
..+|.++|+|.+||.+. +...+..++..|+.+|..+.+
T Consensus 271 ~~~t~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 309 (315)
T 3r9u_A 271 KMQTSVAGLFAAGDLRKDAPKQVICAAGDGAVAALSAMA 309 (315)
T ss_dssp TCBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred CcccCCCCEEEeecccCCchhhhhhHHhhHHHHHHHHHH
Confidence 34678999999999974 345677788899999988864
No 36
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=88.35 E-value=0.32 Score=35.31 Aligned_cols=33 Identities=27% Similarity=0.374 Sum_probs=27.9
Q ss_pred CCcEEEcCCCCCC-----CCChhHHHHHHHHHHHHHhc
Q 033665 69 IPQLYCCGDSTFP-----GIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 69 v~nLyl~G~~~~P-----G~Gv~ga~~sg~~~a~~i~~ 101 (114)
-+|++++||.+|. |.|+..++.+|+.+|+.+.+
T Consensus 276 ~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~ 313 (397)
T 3oz2_A 276 MPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKE 313 (397)
T ss_dssp ETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred eeeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 5799999998753 78999999999999988754
No 37
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=88.19 E-value=0.69 Score=32.76 Aligned_cols=37 Identities=19% Similarity=0.187 Sum_probs=29.3
Q ss_pred CCCCCCcEEEcCCCCCC-CCChhHHHHHHHHHHHHHhc
Q 033665 65 HSTPIPQLYCCGDSTFP-GIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~P-G~Gv~ga~~sg~~~a~~i~~ 101 (114)
.+|.++|+|.+||.+.+ ..-+..|+..|+.+|..+..
T Consensus 265 ~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 302 (310)
T 1fl2_A 265 CETNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFD 302 (310)
T ss_dssp CBCSSTTEEECSTTBSCSSCCHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEeecccCCcchhhhhhHhhHHHHHHHHHH
Confidence 46789999999999863 34567788899999988764
No 38
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=87.58 E-value=0.75 Score=32.81 Aligned_cols=37 Identities=30% Similarity=0.389 Sum_probs=29.2
Q ss_pred CCCCCCcEEEcCCCCCC-CCChhHHHHHHHHHHHHHhc
Q 033665 65 HSTPIPQLYCCGDSTFP-GIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~P-G~Gv~ga~~sg~~~a~~i~~ 101 (114)
.+|..+|+|.+||.+.+ ...+..|+..|+.+|..+.+
T Consensus 276 ~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 313 (319)
T 3cty_A 276 QRTSVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLYS 313 (319)
T ss_dssp CBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEeecccCcchhhHHHHHHHHHHHHHHHHH
Confidence 45779999999999864 24667788889998887754
No 39
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=87.30 E-value=0.9 Score=34.04 Aligned_cols=79 Identities=8% Similarity=0.080 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCC-ceeEEEeCCHHHHHHHhCCCCCCCCCCCCCCCcCCCCCCCCCCcEEEcCCCCCCCCC
Q 033665 6 VLKYCVIWRAVERALGPGFCRD-KCDVKFVGTPLTHQRFLRRNRGTYGPAIQAGKETFPGHSTPIPQLYCCGDSTFPGIG 84 (114)
Q Consensus 6 ~~~~~~il~~l~~~~gP~i~~~-~I~~~~~~TP~t~~~~~~~~~G~~G~~~~~~q~~~p~~~t~v~nLyl~G~~~~PG~G 84 (114)
++..+.+.+.+.+++ |.+ .+ .+......- +...+.+. .+.+.....+|||++.... |.|
T Consensus 307 ~~~~~~l~~~~~~~~-P~l-~~~~~~~~~~g~------~~~t~D~~----------piig~~p~~~~l~~a~G~~--g~G 366 (438)
T 3dje_A 307 KEAETRVRALLKETM-PQL-ADRPFSFARICW------CADTANRE----------FLIDRHPQYHSLVLGCGAS--GRG 366 (438)
T ss_dssp HHHHHHHHHHHHHHC-GGG-TTCCCSEEEEEE------EEECTTSC----------CEEEECSSCTTEEEEECCT--TCC
T ss_pred HHHHHHHHHHHHHhC-ccc-ccCCcceeeEEE------eCcCCCCC----------eEEeecCCCCCEEEEECCC--Ccc
Confidence 445678888899999 998 44 333222110 00112221 0011112268999986543 678
Q ss_pred hhHHHHHHHHHHHHHhcccc
Q 033665 85 VPAVAASGAIVANSLVSVSQ 104 (114)
Q Consensus 85 v~ga~~sg~~~a~~i~~~~~ 104 (114)
+..+...|+.+|+.|++...
T Consensus 367 ~~~ap~~g~~la~~i~g~~~ 386 (438)
T 3dje_A 367 FKYLPSIGNLIVDAMEGKVP 386 (438)
T ss_dssp GGGTTTHHHHHHHHHHTCCC
T ss_pred hhhhHHHHHHHHHHHhCCCC
Confidence 88888899999999988753
No 40
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=86.81 E-value=0.6 Score=35.54 Aligned_cols=33 Identities=9% Similarity=0.082 Sum_probs=27.1
Q ss_pred CcEEEcC---CCCCCCCChhHHHHHHHHHHHHHhcc
Q 033665 70 PQLYCCG---DSTFPGIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 70 ~nLyl~G---~~~~PG~Gv~ga~~sg~~~a~~i~~~ 102 (114)
+|||++| .|-+..+.+-.+|++|+.||+.|+.-
T Consensus 443 ~~l~~~GR~g~~~Y~~~n~D~a~~~g~~aa~~I~~g 478 (513)
T 4gde_A 443 KDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVNG 478 (513)
T ss_dssp TTEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHHHC
T ss_pred cCcEEecCCcccCcCCCCHHHHHHHHHHHHHHHHcC
Confidence 6999999 45554467889999999999999863
No 41
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=85.88 E-value=0.81 Score=29.97 Aligned_cols=39 Identities=33% Similarity=0.308 Sum_probs=29.9
Q ss_pred CCCCCCCcEEEcCCCCCCCC-ChhHHHHHHHHHHHHHhcc
Q 033665 64 GHSTPIPQLYCCGDSTFPGI-GVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~~PG~-Gv~ga~~sg~~~a~~i~~~ 102 (114)
..+|..+|+|.+||.+.... -++.|+..|+.+|..+...
T Consensus 130 ~~~t~~~~i~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 169 (180)
T 2ywl_A 130 GGRTSYPRVYAAGVARGKVPGHAIISAGDGAYVAVHLVSD 169 (180)
T ss_dssp TCBCSSTTEEECGGGGTCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCCCEEEeecccCcchhhHHHHHHhHHHHHHHHHHH
Confidence 34678999999999976443 5667778888888888653
No 42
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=85.57 E-value=1.1 Score=31.63 Aligned_cols=37 Identities=30% Similarity=0.340 Sum_probs=28.2
Q ss_pred CCCCCCcEEEcCCCCCC-CCChhHHHHHHHHHHHHHhc
Q 033665 65 HSTPIPQLYCCGDSTFP-GIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~P-G~Gv~ga~~sg~~~a~~i~~ 101 (114)
.+|..+|+|.+||.+.. ..-+..|+..|+.+|..+.+
T Consensus 269 ~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 306 (311)
T 2q0l_A 269 MKTNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVIS 306 (311)
T ss_dssp CBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCeEEcccccCcchHHHHHHHHhHHHHHHHHHH
Confidence 46789999999999862 24566677788888887754
No 43
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=85.36 E-value=1 Score=34.39 Aligned_cols=40 Identities=18% Similarity=0.106 Sum_probs=32.1
Q ss_pred CCCCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhccc
Q 033665 64 GHSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
..+|.++|+|.+||.+....-.+-|...|+.+|+.+++..
T Consensus 293 ~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 332 (463)
T 4dna_A 293 FSRTSTPGIYALGDVTDRVQLTPVAIHEAMCFIETEYKNN 332 (463)
T ss_dssp TCBCSSTTEEECSGGGSSCCCHHHHHHHHHHHHHHHHSSC
T ss_pred CCCCCCCCEEEEEecCCCCCChHHHHHHHHHHHHHHcCCC
Confidence 3568899999999998644455678889999999998754
No 44
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=85.32 E-value=1.3 Score=33.59 Aligned_cols=40 Identities=18% Similarity=0.177 Sum_probs=31.7
Q ss_pred CCCCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhccc
Q 033665 64 GHSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
..+|..+|+|.+||.+.+..-.+-|+..|+.+|..+++..
T Consensus 304 ~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 343 (470)
T 1dxl_A 304 RFSTNVSGVYAIGDVIPGPMLAHKAEEDGVACVEYLAGKV 343 (470)
T ss_dssp TCBCSSTTEEECSTTSSSCCCHHHHHHHHHHHHHHHTTSC
T ss_pred CCccCCCCEEEEeccCCCCccHHHHHHHHHHHHHHHcCCC
Confidence 3567899999999998644445667889999999998753
No 45
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=85.13 E-value=0.75 Score=32.65 Aligned_cols=37 Identities=14% Similarity=0.091 Sum_probs=26.6
Q ss_pred CCCCCCcEEEcCCCCC-C--CCChhHHHHHHHHHHHHHhc
Q 033665 65 HSTPIPQLYCCGDSTF-P--GIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~-P--G~Gv~ga~~sg~~~a~~i~~ 101 (114)
.+|.++|+|.+||.+. | -.-+..++..|+.+|..+..
T Consensus 273 ~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 312 (332)
T 3lzw_A 273 METNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKA 312 (332)
T ss_dssp SBCSSTTEEECGGGEECTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred CceecCCEEEccceecCCCCcceEeeehhhHHHHHHHHHH
Confidence 4678999999999973 1 12345666778888877765
No 46
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=84.97 E-value=1.2 Score=34.22 Aligned_cols=40 Identities=23% Similarity=0.377 Sum_probs=31.5
Q ss_pred CCCCCCCcEEEcCCCCC-CCCChhHHHHHHHHHHHHHhccc
Q 033665 64 GHSTPIPQLYCCGDSTF-PGIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~~-PG~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
..+|.++|+|.+||.+. ...-++.|...|+.+|+.+++..
T Consensus 313 ~~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~ 353 (483)
T 3dgh_A 313 QEATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYGGS 353 (483)
T ss_dssp TCBCSSTTEEECSTTBTTSCCCHHHHHHHHHHHHHHHHSCC
T ss_pred CCccCCCCEEEEEcccCCCCccHHHHHHHHHHHHHHHcCCC
Confidence 35688999999999974 22456678889999999998764
No 47
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=84.52 E-value=1.2 Score=31.91 Aligned_cols=38 Identities=21% Similarity=0.153 Sum_probs=28.9
Q ss_pred CCCCCCcEEEcCCCCCC-CCChhHHHHHHHHHHHHHhcc
Q 033665 65 HSTPIPQLYCCGDSTFP-GIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~P-G~Gv~ga~~sg~~~a~~i~~~ 102 (114)
.+|..+|+|.+||.+.. ..-+..|+..|+.+|..+...
T Consensus 272 ~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 310 (325)
T 2q7v_A 272 IYTNIPMLFAAGDVSDYIYRQLATSVGAGTRAAMMTERQ 310 (325)
T ss_dssp TBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEeecccCccHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999753 245666778888888887654
No 48
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=84.42 E-value=0.79 Score=32.78 Aligned_cols=36 Identities=19% Similarity=0.282 Sum_probs=27.7
Q ss_pred CCCCCcEEEcCCCCCCC-CChhHHHHHHHHHHHHHhc
Q 033665 66 STPIPQLYCCGDSTFPG-IGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 66 ~t~v~nLyl~G~~~~PG-~Gv~ga~~sg~~~a~~i~~ 101 (114)
+|..+|+|.+||.+.+. ..+..|+..|+.+|..+..
T Consensus 284 ~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 320 (333)
T 1vdc_A 284 QTSVPGVFAAGDVQDKKYRQAITAAGTGCMAALDAEH 320 (333)
T ss_dssp BCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEeeeccCCCchhHHHHHHhHHHHHHHHHH
Confidence 57799999999998642 4555677788888887765
No 49
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=84.08 E-value=0.8 Score=32.72 Aligned_cols=38 Identities=11% Similarity=0.133 Sum_probs=28.6
Q ss_pred CCCCCCcEEEcC--CCCCCC-CChhHHHHHHHHHHHHHhcc
Q 033665 65 HSTPIPQLYCCG--DSTFPG-IGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 65 ~~t~v~nLyl~G--~~~~PG-~Gv~ga~~sg~~~a~~i~~~ 102 (114)
.+|..+|+|.+| |.+.|+ ..+..|+..|+.+|..|...
T Consensus 310 ~~t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~~ 350 (357)
T 4a9w_A 310 RALAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTAY 350 (357)
T ss_dssp BBSSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHHH
T ss_pred cCCCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHHH
Confidence 357799999999 555433 46677888999999887654
No 50
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=83.70 E-value=1.2 Score=34.16 Aligned_cols=40 Identities=20% Similarity=0.237 Sum_probs=32.1
Q ss_pred CCCCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhccc
Q 033665 64 GHSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
..+|.++|+|.+||.+....-.+.|...|+.+|+.+++..
T Consensus 325 ~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 364 (491)
T 3urh_A 325 HFQTSIAGVYAIGDVVRGPMLAHKAEDEGVAVAEIIAGQA 364 (491)
T ss_dssp TCBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTTSC
T ss_pred CCCCCCCCEEEEEecCCCccchhHHHHHHHHHHHHHcCCC
Confidence 3568899999999998433566677889999999998764
No 51
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=83.34 E-value=1.1 Score=34.98 Aligned_cols=40 Identities=25% Similarity=0.313 Sum_probs=31.5
Q ss_pred CCCCCCCcEEEcCCCC-CCCCChhHHHHHHHHHHHHHhccc
Q 033665 64 GHSTPIPQLYCCGDST-FPGIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~-~PG~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
..+|.++|+|.+||.+ .+..-.+.|+..|+.+|+.+++..
T Consensus 341 ~~~Ts~~~IyA~GD~~~g~~~~~~~A~~~g~~aa~~i~g~~ 381 (519)
T 3qfa_A 341 EEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGS 381 (519)
T ss_dssp TSBCSSTTEEECGGGBSSSCCCHHHHHHHHHHHHHHHHSCC
T ss_pred CCccCCCCEEEEEeccCCCCccHHHHHHHHHHHHHHHcCCC
Confidence 3568899999999998 333455778889999999998754
No 52
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=83.33 E-value=0.4 Score=38.00 Aligned_cols=35 Identities=29% Similarity=0.511 Sum_probs=25.8
Q ss_pred CCCCcEEEcCCCC---C-----CCCChhHHHHHHHHHHHHHhc
Q 033665 67 TPIPQLYCCGDST---F-----PGIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 67 t~v~nLyl~G~~~---~-----PG~Gv~ga~~sg~~~a~~i~~ 101 (114)
++|+|||.+|..+ | +|.++..++..|++|++.+.+
T Consensus 525 ~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~ 567 (572)
T 1d4d_A 525 KPITGLYAAGEVTGGVHGANRLGGNAISDIVTYGRIAGASAAK 567 (572)
T ss_dssp SEEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCeeECeecccCCCCCCCCchHhHHHHHHHHHHHHHHHHH
Confidence 7899999999874 2 223455677888988887754
No 53
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=83.30 E-value=0.95 Score=32.10 Aligned_cols=36 Identities=22% Similarity=0.239 Sum_probs=28.0
Q ss_pred CCCCCcEEEcCCCCCCC-CChhHHHHHHHHHHHHHhc
Q 033665 66 STPIPQLYCCGDSTFPG-IGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 66 ~t~v~nLyl~G~~~~PG-~Gv~ga~~sg~~~a~~i~~ 101 (114)
+|..+|+|.+||.+.+. ..+.-|+..|+.+|..+..
T Consensus 275 ~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 311 (320)
T 1trb_A 275 QTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAER 311 (320)
T ss_dssp BCSSTTEEECGGGGCSSSCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEcccccCCcchhhhhhhccHHHHHHHHHH
Confidence 57799999999998643 4566677888888887754
No 54
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=82.85 E-value=1.7 Score=32.33 Aligned_cols=34 Identities=9% Similarity=0.110 Sum_probs=29.3
Q ss_pred CCcEEEcCCC-CCCCCChhHHHHHHHHHHHHHhcc
Q 033665 69 IPQLYCCGDS-TFPGIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 69 v~nLyl~G~~-~~PG~Gv~ga~~sg~~~a~~i~~~ 102 (114)
.+|+|+||.+ .+=+.++.-++.||..+|+.+++.
T Consensus 332 ~~~~~~~Gr~~~~~y~~~~d~i~sa~~~a~~~~~~ 366 (367)
T 1i8t_A 332 EDKVIFGGRLAEYKYYDMHQVISAALYQVKNIMST 366 (367)
T ss_dssp CTTEEECSTTTTTSCCCHHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEcccceeeEecCHHHHHHHHHHHHHHHhcc
Confidence 6899999985 555789999999999999998764
No 55
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=82.77 E-value=1.1 Score=34.19 Aligned_cols=39 Identities=23% Similarity=0.316 Sum_probs=31.3
Q ss_pred CCCCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhcc
Q 033665 64 GHSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~ 102 (114)
..+|.++|+|.+||.+....-.+.++..|+.+|+.+++.
T Consensus 318 ~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 318 FQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp TCBCSSTTEEECGGGGCSSCCHHHHHHHHHHHHHHHHSC
T ss_pred CcccCCCCEEEEEecCCCCccHhHHHHHHHHHHHHHcCC
Confidence 346889999999999843345667788999999999876
No 56
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=82.66 E-value=1.1 Score=34.41 Aligned_cols=39 Identities=13% Similarity=0.133 Sum_probs=30.4
Q ss_pred CCCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhccc
Q 033665 65 HSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
.+|.++|+|.+||.+....-.+.|+..|+.+|+.+++..
T Consensus 314 ~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~ 352 (484)
T 3o0h_A 314 MTTNVSHIWAVGDVTGHIQLTPVAIHDAMCFVKNAFENT 352 (484)
T ss_dssp SBCSSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHHC--
T ss_pred CCCCCCCEEEEEecCCCCcCHHHHHHHHHHHHHHHcCCC
Confidence 467899999999998633455677889999999998753
No 57
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=82.29 E-value=1.3 Score=33.92 Aligned_cols=38 Identities=21% Similarity=0.235 Sum_probs=31.0
Q ss_pred CCCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhcc
Q 033665 65 HSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~ 102 (114)
.+|.++|+|.+||.+....-.+.|+..|+.+|..+++.
T Consensus 296 ~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 333 (466)
T 3l8k_A 296 MKTNIPNVFATGDANGLAPYYHAAVRMSIAAANNIMAN 333 (466)
T ss_dssp CBCSSTTEEECGGGTCSCCSHHHHHHHHHHHHHHHHTT
T ss_pred ccCCCCCEEEEEecCCCCccHhHHHHHHHHHHHHHhCC
Confidence 46789999999999864345567888999999999865
No 58
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=82.11 E-value=1 Score=34.78 Aligned_cols=37 Identities=14% Similarity=0.227 Sum_probs=31.0
Q ss_pred CCCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhc
Q 033665 65 HSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~ 101 (114)
.+|.++|+|.+||.+.+..-.+.|+..|+.+|..+++
T Consensus 301 ~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 301 LQTSVDHIFVAGDANNTLTLLHEAADDGKVAGTNAGA 337 (492)
T ss_dssp CBCSSTTEEECGGGGTSSCSHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEEecCCCCccHHHHHHHHHHHHHHHcC
Confidence 3678999999999987556666888899999999886
No 59
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=82.00 E-value=1.3 Score=34.07 Aligned_cols=40 Identities=25% Similarity=0.414 Sum_probs=31.1
Q ss_pred CCCCCCCcEEEcCCCCC-CCCChhHHHHHHHHHHHHHhccc
Q 033665 64 GHSTPIPQLYCCGDSTF-PGIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~~-PG~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
..+|.++|+|.+||.+. ...-.+.|+..|+.+|+.+++..
T Consensus 313 ~~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~ 353 (488)
T 3dgz_A 313 QEATSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGKS 353 (488)
T ss_dssp TSBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHSCC
T ss_pred CCccCCCCEEEeEEecCCCCcchhHHHHHHHHHHHHHcCCC
Confidence 34678999999999973 22345677889999999998754
No 60
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=81.98 E-value=1.1 Score=34.50 Aligned_cols=37 Identities=16% Similarity=0.125 Sum_probs=30.1
Q ss_pred CCCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhc
Q 033665 65 HSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~ 101 (114)
.+|.++|+|.+||.+....-+.-|+..|+.+|..|..
T Consensus 405 ~~Ts~~~VfA~GD~~~g~~~v~~A~~~G~~aA~~i~~ 441 (456)
T 2vdc_G 405 KMTNMDGVFAAGDIVRGASLVVWAIRDGRDAAEGIHA 441 (456)
T ss_dssp CBCSSTTEEECGGGGSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEeccccCCchHHHHHHHHHHHHHHHHHH
Confidence 4688999999999976334577888899999998865
No 61
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=81.58 E-value=1.7 Score=32.97 Aligned_cols=40 Identities=15% Similarity=0.249 Sum_probs=31.6
Q ss_pred CCCCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhccc
Q 033665 64 GHSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
..+|..+|+|.+||.+.+..-.+-|...|+.+|+.+.+..
T Consensus 295 ~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~ 334 (455)
T 1ebd_A 295 QCRTSVPNIFAIGDIVPGPALAHKASYEGKVAAEAIAGHP 334 (455)
T ss_dssp TCBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTSCC
T ss_pred CcccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHHcCCC
Confidence 3567899999999998643445667889999999998754
No 62
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=81.56 E-value=1.3 Score=33.68 Aligned_cols=37 Identities=19% Similarity=0.229 Sum_probs=30.5
Q ss_pred CCCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhc
Q 033665 65 HSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~ 101 (114)
.+|.++|+|.+||.+.+..-.+-|...|+.+|+.+++
T Consensus 297 ~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g 333 (464)
T 2a8x_A 297 MRTNVGHIYAIGDVNGLLQLAHVAEAQGVVAAETIAG 333 (464)
T ss_dssp SBCSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCEEEeECcCCCccCHHHHHHHHHHHHHHhcC
Confidence 5678999999999986444566778899999999987
No 63
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=81.41 E-value=2.3 Score=32.34 Aligned_cols=38 Identities=29% Similarity=0.271 Sum_probs=31.4
Q ss_pred CCCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhcc
Q 033665 65 HSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~ 102 (114)
.+|..+|+|.+||.+....-++.|+..|+.+|..+++.
T Consensus 297 ~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 334 (467)
T 1zk7_A 297 MRTSNPNIYAAGDCTDQPQFVYVAAAAGTRAAINMTGG 334 (467)
T ss_dssp CBCSSTTEEECSTTBSSCCCHHHHHHHHHHHHHHHTTC
T ss_pred cccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHHcCC
Confidence 46789999999999864456778888999999988865
No 64
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=81.26 E-value=1.3 Score=33.82 Aligned_cols=40 Identities=20% Similarity=0.328 Sum_probs=31.2
Q ss_pred CCCCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhccc
Q 033665 64 GHSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
..+|.++|+|.+||.+....-.+.|...|+.+|+.+++..
T Consensus 305 ~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 344 (476)
T 3lad_A 305 YCATSVPGVYAIGDVVRGAMLAHKASEEGVVVAERIAGHK 344 (476)
T ss_dssp TSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHCC
T ss_pred CcccCCCCEEEEEccCCCcccHHHHHHHHHHHHHHhcCCC
Confidence 3468899999999998423456677889999999998754
No 65
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=81.16 E-value=2 Score=33.55 Aligned_cols=38 Identities=18% Similarity=0.183 Sum_probs=29.6
Q ss_pred CCCCCCCcEEEcCCCCCC-CCChhHHHHHHHHHHHHHhc
Q 033665 64 GHSTPIPQLYCCGDSTFP-GIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~~P-G~Gv~ga~~sg~~~a~~i~~ 101 (114)
..+|.++|+|.+||.+.+ ..-+..|+..|..+|..+..
T Consensus 475 ~~~ts~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 513 (521)
T 1hyu_A 475 KCETSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFD 513 (521)
T ss_dssp TCBCSSTTEEECSTTBCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEeecccCCCcceeeehHHhHHHHHHHHHH
Confidence 356789999999999863 34567788888888887754
No 66
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=80.87 E-value=1.5 Score=33.41 Aligned_cols=39 Identities=21% Similarity=0.327 Sum_probs=31.6
Q ss_pred CCCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhccc
Q 033665 65 HSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
.+|..+|+|.+||.+.+..-.+.|...|+.+|..+++..
T Consensus 308 ~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~ 346 (474)
T 1zmd_A 308 FQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGA 346 (474)
T ss_dssp CBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTTCC
T ss_pred CccCCCCEEEeeecCCCCccHHHHHHHHHHHHHHhcCCC
Confidence 467899999999998644456678889999999998754
No 67
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=80.78 E-value=0.49 Score=36.76 Aligned_cols=36 Identities=25% Similarity=0.368 Sum_probs=25.7
Q ss_pred CCCCCcEEEcCCCC---C-----CCCChhHHHHHHHHHHHHHhc
Q 033665 66 STPIPQLYCCGDST---F-----PGIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 66 ~t~v~nLyl~G~~~---~-----PG~Gv~ga~~sg~~~a~~i~~ 101 (114)
.+||+|||.||..+ | +|..+.-++..|++|++.+.+
T Consensus 465 g~~I~GLyAaGe~~gg~~g~~y~~G~sl~~~~~fGr~Ag~~aa~ 508 (510)
T 4at0_A 465 GEPIPGLFAAGRCTSGVCAGGYASGTSLGDGSFYGRRAGISAAK 508 (510)
T ss_dssp SSEEEEEEECGGGBCCSCSSSCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCcCCeeeceecccCCCcCCCCcHHhHHHHHHHHHHHHHHHHh
Confidence 37899999999753 3 223455677889998887654
No 68
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=80.64 E-value=1.4 Score=31.76 Aligned_cols=36 Identities=25% Similarity=0.270 Sum_probs=27.1
Q ss_pred CCCCCcEEEcCCCCCCC-CChhHHHHHHHHHHHHHhc
Q 033665 66 STPIPQLYCCGDSTFPG-IGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 66 ~t~v~nLyl~G~~~~PG-~Gv~ga~~sg~~~a~~i~~ 101 (114)
+|..+|+|.+||.+.+. .-...|+..|+.+|..+..
T Consensus 277 ~t~~~~iya~GD~~~~~~~~~~~A~~~g~~aA~~i~~ 313 (335)
T 2a87_A 277 STSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAER 313 (335)
T ss_dssp BCSSTTEEECGGGTCCSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEeeecCCccHHHHHHHHHhHHHHHHHHHH
Confidence 57799999999998643 3455667778888877754
No 69
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=80.63 E-value=1.6 Score=33.16 Aligned_cols=38 Identities=26% Similarity=0.336 Sum_probs=30.7
Q ss_pred CCCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhcc
Q 033665 65 HSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~ 102 (114)
.+|..+|+|.+||.+....-.+.|...|+.+|..+++.
T Consensus 291 ~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 328 (450)
T 1ges_A 291 QNTNIEGIYAVGDNTGAVELTPVAVAAGRRLSERLFNN 328 (450)
T ss_dssp SBCSSTTEEECSGGGTSCCCHHHHHHHHHHHHHHHHTT
T ss_pred CccCCCCEEEEeccCCCCccHHHHHHHHHHHHHHHcCC
Confidence 46789999999999753345667888999999999874
No 70
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=80.32 E-value=0.62 Score=36.72 Aligned_cols=35 Identities=23% Similarity=0.446 Sum_probs=24.7
Q ss_pred CCCCcEEEcCCCC---C-----CCCChhHHHHHHHHHHHHHhc
Q 033665 67 TPIPQLYCCGDST---F-----PGIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 67 t~v~nLyl~G~~~---~-----PG~Gv~ga~~sg~~~a~~i~~ 101 (114)
++|+|||.+|..+ | +|.++..++..|++|++.+.+
T Consensus 519 ~~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~ 561 (566)
T 1qo8_A 519 KPIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAK 561 (566)
T ss_dssp CEEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred CEeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHH
Confidence 6899999999875 2 122355567788888877643
No 71
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=80.19 E-value=1.7 Score=33.32 Aligned_cols=39 Identities=26% Similarity=0.362 Sum_probs=31.0
Q ss_pred CCCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhccc
Q 033665 65 HSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
.+|..+|+|.+||.+....-++-|...|+.+|..+++..
T Consensus 310 ~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~ 348 (479)
T 2hqm_A 310 QNTNVPNIYSLGDVVGKVELTPVAIAAGRKLSNRLFGPE 348 (479)
T ss_dssp CBCSSTTEEECGGGTTSSCCHHHHHHHHHHHHHHHHSCG
T ss_pred CccCCCCEEEEEecCCCcccHHHHHHHHHHHHHHhcCCC
Confidence 467899999999997533456778889999999998643
No 72
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=80.12 E-value=0.67 Score=36.54 Aligned_cols=37 Identities=16% Similarity=0.218 Sum_probs=25.0
Q ss_pred CCCCCCCcEEEcCCCC----C-----CCCChhHHHHHHHHHHHHHh
Q 033665 64 GHSTPIPQLYCCGDST----F-----PGIGVPAVAASGAIVANSLV 100 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~----~-----PG~Gv~ga~~sg~~~a~~i~ 100 (114)
..+++|+|||.||..+ | .|.++.-++..|+.|++.+.
T Consensus 362 ~~~t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa 407 (540)
T 1chu_A 362 HGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDIT 407 (540)
T ss_dssp TCBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHH
Confidence 3468999999999865 2 12234446667888777664
No 73
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=79.97 E-value=1.5 Score=33.45 Aligned_cols=40 Identities=18% Similarity=0.250 Sum_probs=31.5
Q ss_pred CCCCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhccc
Q 033665 64 GHSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
..+|..+|+|.+||.+....-.+.|+..|+.+|+.+++..
T Consensus 312 ~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~ 351 (478)
T 1v59_A 312 QFNSKFPHIKVVGDVTFGPMLAHKAEEEGIAAVEMLKTGH 351 (478)
T ss_dssp TSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHSC
T ss_pred CCccCCCCEEEeeccCCCcccHHHHHHHHHHHHHHHcCCC
Confidence 3467899999999998643456678889999999998753
No 74
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=79.89 E-value=1.7 Score=33.15 Aligned_cols=39 Identities=23% Similarity=0.378 Sum_probs=31.5
Q ss_pred CCCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhccc
Q 033665 65 HSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
.+|..+|+|.+||.+.+..-.+-|...|+.+|..+++..
T Consensus 297 ~~t~~~~Iya~GD~~~~~~l~~~A~~~g~~aa~~i~g~~ 335 (464)
T 2eq6_A 297 METSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKD 335 (464)
T ss_dssp CBCSSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTTCC
T ss_pred cccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHhcCCC
Confidence 467899999999998644456677889999999998753
No 75
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=79.80 E-value=2.1 Score=30.47 Aligned_cols=37 Identities=35% Similarity=0.520 Sum_probs=25.8
Q ss_pred CCCCCCcEEEcCCCCC-CC--CChhHHHHHHHHHHHHHhc
Q 033665 65 HSTPIPQLYCCGDSTF-PG--IGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~-PG--~Gv~ga~~sg~~~a~~i~~ 101 (114)
.+|.++|+|.+||.+. |+ .-+..++..|+.+|..+.+
T Consensus 275 ~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 314 (335)
T 2zbw_A 275 MATSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAAA 314 (335)
T ss_dssp CBCSSTTEEECSTTEECTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEeccccccCcchhhhhhhHHHHHHHHHHHHH
Confidence 4678999999999974 22 2344555677777777754
No 76
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=79.79 E-value=2 Score=32.67 Aligned_cols=40 Identities=23% Similarity=0.277 Sum_probs=31.5
Q ss_pred CCCCCCCcEEEcCCCCC-CCCChhHHHHHHHHHHHHHhccc
Q 033665 64 GHSTPIPQLYCCGDSTF-PGIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~~-PG~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
..+|..+|+|.+||.+. ...-.+-|+..|+.+|+.+++..
T Consensus 301 ~~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~ 341 (468)
T 2qae_A 301 HFETSIPDVYAIGDVVDKGPMLAHKAEDEGVACAEILAGKP 341 (468)
T ss_dssp TSBCSSTTEEECGGGBSSSCSCHHHHHHHHHHHHHHHTTCC
T ss_pred CcccCCCCEEEeeccCCCCCccHhHHHHHHHHHHHHHcCCC
Confidence 35678999999999986 33455667889999999998754
No 77
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=79.68 E-value=1.8 Score=33.22 Aligned_cols=39 Identities=18% Similarity=0.267 Sum_probs=31.5
Q ss_pred CCCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhccc
Q 033665 65 HSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
.+|..+|+|.+||.+.+..-.+.|...|+.+|..+++..
T Consensus 312 ~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~ 350 (482)
T 1ojt_A 312 MRTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENCAGHK 350 (482)
T ss_dssp SBCSSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTTCC
T ss_pred cccCCCCEEEEEcccCCCccHHHHHHHHHHHHHHHcCCC
Confidence 467899999999998643456678889999999998753
No 78
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=79.44 E-value=0.61 Score=36.76 Aligned_cols=35 Identities=23% Similarity=0.433 Sum_probs=25.0
Q ss_pred CCCCcEEEcCCCC---C-----CCCChhHHHHHHHHHHHHHhc
Q 033665 67 TPIPQLYCCGDST---F-----PGIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 67 t~v~nLyl~G~~~---~-----PG~Gv~ga~~sg~~~a~~i~~ 101 (114)
++|+|||.+|..+ | +|.++..++..|++|++.+.+
T Consensus 524 ~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~ 566 (571)
T 1y0p_A 524 QVIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAK 566 (571)
T ss_dssp CEEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHH
Confidence 7899999999764 2 223455567788888877653
No 79
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=79.42 E-value=1.9 Score=33.27 Aligned_cols=38 Identities=21% Similarity=0.127 Sum_probs=31.2
Q ss_pred CCCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhcc
Q 033665 65 HSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~ 102 (114)
.+|..+|+|.+||.+.+..-.+-|+..|+.+|+.+++.
T Consensus 305 ~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~ 342 (499)
T 1xdi_A 305 SRTLATGIYAAGDCTGLLPLASVAAMQGRIAMYHALGE 342 (499)
T ss_dssp SBCSSTTEEECSGGGTSCSCHHHHHHHHHHHHHHHTTC
T ss_pred cccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHhcCC
Confidence 56789999999999864344567888999999999876
No 80
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=78.86 E-value=1.8 Score=33.42 Aligned_cols=38 Identities=24% Similarity=0.385 Sum_probs=30.9
Q ss_pred CCCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhcc
Q 033665 65 HSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~ 102 (114)
.+|..+|+|.+||.+....-++.|+..|+.+|..+++.
T Consensus 318 ~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~ 355 (495)
T 2wpf_A 318 SRTNVPNIYAIGDITDRLMLTPVAINEGAALVDTVFGN 355 (495)
T ss_dssp CBCSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHSS
T ss_pred CccCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcCC
Confidence 46789999999999863345667788999999999874
No 81
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=78.70 E-value=2.2 Score=31.03 Aligned_cols=83 Identities=13% Similarity=0.253 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCC-ceeEEEeCCHHHHHHHhCCCCCCCCCCCCCCCcCCCCCCCCCCcEEEcCCCCCCCCC
Q 033665 6 VLKYCVIWRAVERALGPGFCRD-KCDVKFVGTPLTHQRFLRRNRGTYGPAIQAGKETFPGHSTPIPQLYCCGDSTFPGIG 84 (114)
Q Consensus 6 ~~~~~~il~~l~~~~gP~i~~~-~I~~~~~~TP~t~~~~~~~~~G~~G~~~~~~q~~~p~~~t~v~nLyl~G~~~~PG~G 84 (114)
++..+.+++.+.+++ |++ ++ .+....... +...+.+. .+-+.....+|||++.... |.|
T Consensus 285 ~~~~~~l~~~~~~~~-p~l-~~~~~~~~w~g~------~~~t~d~~----------p~ig~~~~~~~l~~~~G~~--g~G 344 (382)
T 1ryi_A 285 LGGLESVMKKAKTML-PAI-QNMKVDRFWAGL------RPGTKDGK----------PYIGRHPEDSRILFAAGHF--RNG 344 (382)
T ss_dssp HHHHHHHHHHHHHHC-GGG-GGSEEEEEEEEE------EEECSSSC----------CEEEEETTEEEEEEEECCS--SCT
T ss_pred HHHHHHHHHHHHHhC-CCc-CCCceeeEEEEe------cccCCCCC----------cEeccCCCcCCEEEEEcCC--cch
Confidence 345678889999998 988 43 333222110 00011111 0001111268999986643 789
Q ss_pred hhHHHHHHHHHHHHHhcccchHHH
Q 033665 85 VPAVAASGAIVANSLVSVSQHSEL 108 (114)
Q Consensus 85 v~ga~~sg~~~a~~i~~~~~~~~~ 108 (114)
+..+..+|+.+|+.+++.....++
T Consensus 345 ~~~a~~~g~~la~~i~~~~~~~~~ 368 (382)
T 1ryi_A 345 ILLAPATGALISDLIMNKEVNQDW 368 (382)
T ss_dssp TTTHHHHHHHHHHHHTTCCCCHHH
T ss_pred HHHhHHHHHHHHHHHhCCCCCchh
Confidence 999999999999999987655443
No 82
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=78.58 E-value=1.9 Score=33.25 Aligned_cols=38 Identities=21% Similarity=0.323 Sum_probs=31.1
Q ss_pred CCCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhcc
Q 033665 65 HSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~ 102 (114)
.+|..+|+|.+||.+....-++.|+..|+.+|+.+++.
T Consensus 314 ~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~ 351 (490)
T 1fec_A 314 SKTNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFAN 351 (490)
T ss_dssp CBCSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHSS
T ss_pred CccCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcCC
Confidence 46789999999999863345667888999999999874
No 83
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=78.20 E-value=1.2 Score=33.29 Aligned_cols=39 Identities=18% Similarity=0.308 Sum_probs=30.8
Q ss_pred CCCCCCcEEEcCCCCCCCC----C-------hhHHHHHHHHHHHHHhccc
Q 033665 65 HSTPIPQLYCCGDSTFPGI----G-------VPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG~----G-------v~ga~~sg~~~a~~i~~~~ 103 (114)
.+|..+|+|.+||.+.... | +.-+...|+.+|+.+++.+
T Consensus 273 ~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 322 (415)
T 3lxd_A 273 CRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGAP 322 (415)
T ss_dssp CBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTTCC
T ss_pred CCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcCCC
Confidence 4678999999999974322 2 5678889999999999865
No 84
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=78.12 E-value=2 Score=32.81 Aligned_cols=38 Identities=29% Similarity=0.370 Sum_probs=30.4
Q ss_pred CCCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhcc
Q 033665 65 HSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~ 102 (114)
.+|..+|+|.+||.+....-++.|+..|+.+|..+++.
T Consensus 290 ~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 327 (463)
T 2r9z_A 290 QNTNVPGVYALGDITGRDQLTPVAIAAGRRLAERLFDG 327 (463)
T ss_dssp SBCSSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHHSC
T ss_pred CccCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcCC
Confidence 46789999999999753345667788999999998864
No 85
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=78.09 E-value=1.7 Score=32.59 Aligned_cols=40 Identities=18% Similarity=0.233 Sum_probs=31.2
Q ss_pred CCCCCCCcEEEcCCCCC-C---CCChhHHHHHHHHHHHHHhccc
Q 033665 64 GHSTPIPQLYCCGDSTF-P---GIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~~-P---G~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
..+|..+|+|.+||.+. | ..-+.-|...|+.+|..+++..
T Consensus 252 ~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~~ 295 (385)
T 3klj_A 252 HMETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACGED 295 (385)
T ss_dssp TCBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTTCC
T ss_pred CcccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcCCC
Confidence 35688999999999974 2 1245677889999999998764
No 86
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=77.60 E-value=2.1 Score=33.27 Aligned_cols=39 Identities=21% Similarity=0.304 Sum_probs=31.7
Q ss_pred CCCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhccc
Q 033665 65 HSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
.+|..+|+|.+||.+....-.+.|...|+.+|..+++..
T Consensus 341 ~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 379 (523)
T 1mo9_A 341 LQTSVPNVYAVGDLIGGPMEMFKARKSGCYAARNVMGEK 379 (523)
T ss_dssp SBCSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHTTCC
T ss_pred CccCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcCCC
Confidence 467899999999998633456678889999999998754
No 87
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=77.32 E-value=2.6 Score=30.63 Aligned_cols=77 Identities=9% Similarity=0.078 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCceeEEEeCCHHHHHHHhCCCCCCCCCCCCCCCcCCCCCCCCCCcEEEcCCCCCCCCChh
Q 033665 7 LKYCVIWRAVERALGPGFCRDKCDVKFVGTPLTHQRFLRRNRGTYGPAIQAGKETFPGHSTPIPQLYCCGDSTFPGIGVP 86 (114)
Q Consensus 7 ~~~~~il~~l~~~~gP~i~~~~I~~~~~~TP~t~~~~~~~~~G~~G~~~~~~q~~~p~~~t~v~nLyl~G~~~~PG~Gv~ 86 (114)
+..+.+++.+.+++ |++ .+.+....... +...+.+. .+-+.....+|||++.... |.|+.
T Consensus 289 ~~~~~l~~~~~~~~-P~l-~~~~~~~w~g~------r~~t~D~~----------p~ig~~~~~~~l~~a~G~~--g~G~~ 348 (389)
T 2gf3_A 289 EDESNLRAFLEEYM-PGA-NGELKRGAVCM------YTKTLDEH----------FIIDLHPEHSNVVIAAGFS--GHGFK 348 (389)
T ss_dssp HHHHHHHHHHHHHC-GGG-CSCEEEEEEEE------EEECTTSC----------CEEEEETTEEEEEEEECCT--TCCGG
T ss_pred HHHHHHHHHHHHhC-CCC-CCCceEEEEEE------eccCCCCC----------eEEccCCCCCCEEEEECCc--ccccc
Confidence 34588999999999 999 65444332210 00011111 0001111368999885543 57999
Q ss_pred HHHHHHHHHHHHHhccc
Q 033665 87 AVAASGAIVANSLVSVS 103 (114)
Q Consensus 87 ga~~sg~~~a~~i~~~~ 103 (114)
.+...|+.+|+.+++.+
T Consensus 349 ~ap~~g~~la~~i~~~~ 365 (389)
T 2gf3_A 349 FSSGVGEVLSQLALTGK 365 (389)
T ss_dssp GHHHHHHHHHHHHHHSC
T ss_pred ccHHHHHHHHHHHcCCC
Confidence 89999999999998865
No 88
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=76.78 E-value=3.1 Score=30.12 Aligned_cols=37 Identities=22% Similarity=0.405 Sum_probs=25.8
Q ss_pred CCCCCCcEEEcCCCCC-CC--CChhHHHHHHHHHHHHHhc
Q 033665 65 HSTPIPQLYCCGDSTF-PG--IGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~-PG--~Gv~ga~~sg~~~a~~i~~ 101 (114)
.+|.++|+|.+||.+. |+ .-+..++..|..+|..+.+
T Consensus 286 ~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 325 (360)
T 3ab1_A 286 MKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLS 325 (360)
T ss_dssp SBCSSTTEEECSTTEECTTCCCSHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEecCccCCCCccceeehhHHHHHHHHHHHHh
Confidence 4678999999999974 22 2344555677777777754
No 89
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=76.76 E-value=1.9 Score=31.84 Aligned_cols=39 Identities=23% Similarity=0.292 Sum_probs=29.5
Q ss_pred CCCCCCcEEEcCCCCCC-CC---ChhHHHHHHHHHHHHHhccc
Q 033665 65 HSTPIPQLYCCGDSTFP-GI---GVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~P-G~---Gv~ga~~sg~~~a~~i~~~~ 103 (114)
.+|..+|+|.+||.+.+ +. -+..+...|+.+|+.+++.+
T Consensus 265 ~~t~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~a~~i~g~~ 307 (384)
T 2v3a_A 265 LRTSHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLAGNP 307 (384)
T ss_dssp CBCSSTTEEECGGGEEETTBCCCSHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCCEEEeeeeeeECCCCcchHHHHHHHHHHHHHHhcCCC
Confidence 46789999999999743 21 24456778999999998754
No 90
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=75.94 E-value=0.96 Score=36.21 Aligned_cols=37 Identities=14% Similarity=0.278 Sum_probs=24.3
Q ss_pred CCCCCCCcEEEcCCCC----C-----CCCChhHHHHHHHHHHHHHh
Q 033665 64 GHSTPIPQLYCCGDST----F-----PGIGVPAVAASGAIVANSLV 100 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~----~-----PG~Gv~ga~~sg~~~a~~i~ 100 (114)
..+++|+|||.||..+ | .|.++.-++..|+.|++.+.
T Consensus 367 ~~~~~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa 412 (602)
T 1kf6_A 367 NCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQAT 412 (602)
T ss_dssp TSBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCccccCCEEEccccccccccCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 3578999999999864 2 12234556666777766553
No 91
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=74.52 E-value=2.5 Score=33.31 Aligned_cols=38 Identities=21% Similarity=0.300 Sum_probs=29.8
Q ss_pred CCCCCCcEEEcCCCCCC-CCChhHHHHHHHHHHHHHhcc
Q 033665 65 HSTPIPQLYCCGDSTFP-GIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~P-G~Gv~ga~~sg~~~a~~i~~~ 102 (114)
.+|.++|+|.+||.+.. ..-++.|+..|+.+|..+++.
T Consensus 421 ~~ts~~~VyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 459 (598)
T 2x8g_A 421 EQTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAG 459 (598)
T ss_dssp SBCSSTTEEECGGGBTTSCCCHHHHHHHHHHHHHHHHHC
T ss_pred CcCCCCCEEEEeeecCCCCccHHHHHHhHHHHHHHHhcC
Confidence 46889999999999542 235667788999999998864
No 92
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=74.51 E-value=1.7 Score=32.57 Aligned_cols=39 Identities=21% Similarity=0.249 Sum_probs=30.7
Q ss_pred CCCCCCcEEEcCCCCC-CCC-C-------hhHHHHHHHHHHHHHhccc
Q 033665 65 HSTPIPQLYCCGDSTF-PGI-G-------VPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~-PG~-G-------v~ga~~sg~~~a~~i~~~~ 103 (114)
.+|..+|+|.+||.+. |.. | +.-+...|+.+|+.+++..
T Consensus 263 ~~t~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 310 (410)
T 3ef6_A 263 GATLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILGKN 310 (410)
T ss_dssp SBCSSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred eeECCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHHHHHHcCCC
Confidence 4678999999999964 221 1 5788899999999998865
No 93
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=73.85 E-value=0.8 Score=36.97 Aligned_cols=34 Identities=21% Similarity=0.458 Sum_probs=24.0
Q ss_pred CCCCcEEEcCCCC----C-----CCCChhHHHHHHHHHHHHHh
Q 033665 67 TPIPQLYCCGDST----F-----PGIGVPAVAASGAIVANSLV 100 (114)
Q Consensus 67 t~v~nLyl~G~~~----~-----PG~Gv~ga~~sg~~~a~~i~ 100 (114)
++|+|||.||..+ | .|.++.-++..|+.|++.+.
T Consensus 387 t~IpGLyAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa 429 (621)
T 2h88_A 387 KVVPGLYACGEAASASVHGANRLGANSLLDLVVFGRACALTIA 429 (621)
T ss_dssp EEEEEEEECGGGEECSSSTTSCCTTSHHHHHHHHHHHHHHHHH
T ss_pred cccCceEEccccccccccCCCCCchHhHHHHHHHHHHHHHHHH
Confidence 6899999999853 3 23446667777888776654
No 94
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=73.72 E-value=3.1 Score=31.64 Aligned_cols=39 Identities=18% Similarity=0.241 Sum_probs=30.7
Q ss_pred CCCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhccc
Q 033665 65 HSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
.+|..+|+|.+||.+....-.+.|...|+.+|..+++..
T Consensus 293 ~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 331 (458)
T 1lvl_A 293 CQTSMHNVWAIGDVAGEPMLAHRAMAQGEMVAEIIAGKA 331 (458)
T ss_dssp CBCSSTTEEECGGGGCSSCCHHHHHHHHHHHHHHHTTCC
T ss_pred CcCCCCCEEEeeccCCCcccHHHHHHHHHHHHHHhcCCC
Confidence 467799999999998643445667789999999998743
No 95
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=73.29 E-value=1.5 Score=32.76 Aligned_cols=39 Identities=23% Similarity=0.246 Sum_probs=30.9
Q ss_pred CCCCCCcEEEcCCCCCCCC---C-------hhHHHHHHHHHHHHHhccc
Q 033665 65 HSTPIPQLYCCGDSTFPGI---G-------VPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG~---G-------v~ga~~sg~~~a~~i~~~~ 103 (114)
.+|..+|+|.+||.+.... | +.-+...|+.+|+.+++.+
T Consensus 263 ~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 311 (404)
T 3fg2_P 263 LLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTGDA 311 (404)
T ss_dssp SBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTTCC
T ss_pred cccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhCCCC
Confidence 4678999999999974221 2 6778889999999999865
No 96
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=72.23 E-value=3.9 Score=32.42 Aligned_cols=33 Identities=24% Similarity=0.178 Sum_probs=28.8
Q ss_pred CCcEEEcCCCCCC-----CCChhHHHHHHHHHHHHHhc
Q 033665 69 IPQLYCCGDSTFP-----GIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 69 v~nLyl~G~~~~P-----G~Gv~ga~~sg~~~a~~i~~ 101 (114)
-+|++++||.+|. |.|+..++.+|.++|+.+..
T Consensus 346 ~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~ 383 (584)
T 2gmh_A 346 FPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFN 383 (584)
T ss_dssp ETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHH
Confidence 4899999999864 78999999999999999864
No 97
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=72.03 E-value=3 Score=30.88 Aligned_cols=39 Identities=21% Similarity=0.236 Sum_probs=30.3
Q ss_pred CCCCCCcEEEcCCCCCC-C---CChhHHHHHHHHHHHHHhccc
Q 033665 65 HSTPIPQLYCCGDSTFP-G---IGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~P-G---~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
.+|..+|+|.+||.+.. + .-++.|+..|+.+|+.+++..
T Consensus 256 ~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~~ 298 (367)
T 1xhc_A 256 FRTSAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILKGEP 298 (367)
T ss_dssp SBCSSTTEEECGGGEEBTTBCCCSHHHHHHHHHHHHHHHTTCC
T ss_pred cccCCCCEEEeEeeeecCCCCccHHHHHHHHHHHHHHHhcCCC
Confidence 46789999999999742 2 245677889999999998754
No 98
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=71.73 E-value=1.9 Score=32.26 Aligned_cols=33 Identities=12% Similarity=0.133 Sum_probs=28.3
Q ss_pred CCcEEEcCCC-CCCCCChhHHHHHHHHHHHHHhc
Q 033665 69 IPQLYCCGDS-TFPGIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 69 v~nLyl~G~~-~~PG~Gv~ga~~sg~~~a~~i~~ 101 (114)
.+|+|+||.+ .+=+.++.-++.+|..+|+.+++
T Consensus 335 ~~~~~~~Gr~~~~~~~~~~d~i~sa~~~a~~~~~ 368 (384)
T 2bi7_A 335 ETNITFVGRLGTYRYLDMDVTIAEALKTAEVYLN 368 (384)
T ss_dssp CSSEEECHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEccccEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 5899999985 45468999999999999999875
No 99
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=71.08 E-value=1.1 Score=33.73 Aligned_cols=32 Identities=13% Similarity=0.198 Sum_probs=27.5
Q ss_pred CcEEEcCCC-CCCCCChhHHHHHHHHHHHHHhc
Q 033665 70 PQLYCCGDS-TFPGIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 70 ~nLyl~G~~-~~PG~Gv~ga~~sg~~~a~~i~~ 101 (114)
+|+|+||.+ .+-+.++..++.||..+|+.+.+
T Consensus 353 ~~v~~~G~~~~~~~~~~e~~i~sa~~~a~~l~~ 385 (399)
T 1v0j_A 353 SKVLFGGRLGTYQYLDMHMAIASALNMYDNVLA 385 (399)
T ss_dssp HCEEECHHHHHTCCCCHHHHHHHHHHHHHHTHH
T ss_pred CCEEEccceEEEEecCHHHHHHHHHHHHHHHhh
Confidence 799999985 44467999999999999999874
No 100
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=70.86 E-value=5.9 Score=30.52 Aligned_cols=39 Identities=21% Similarity=0.372 Sum_probs=29.2
Q ss_pred CCCCCCCcEEEcCCCCC----------------------------------CCCChhHHHHHHHHHHHHHhcc
Q 033665 64 GHSTPIPQLYCCGDSTF----------------------------------PGIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~~----------------------------------PG~Gv~ga~~sg~~~a~~i~~~ 102 (114)
..+|..+|+|.+||.+. .-.-.+-|+..|+.+|+.+++.
T Consensus 299 ~~~t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~ 371 (500)
T 1onf_A 299 NQRTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLK 371 (500)
T ss_dssp TCBCSSSSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHSC
T ss_pred CcccCCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhCC
Confidence 35678999999999981 1123556788999999999864
No 101
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=70.70 E-value=2.9 Score=33.59 Aligned_cols=15 Identities=27% Similarity=0.401 Sum_probs=12.9
Q ss_pred CCCCCcEEEcCCCCC
Q 033665 66 STPIPQLYCCGDSTF 80 (114)
Q Consensus 66 ~t~v~nLyl~G~~~~ 80 (114)
.|+|+|||.||..+-
T Consensus 428 ~t~I~GLyAaGe~a~ 442 (643)
T 1jnr_A 428 MTTVKGLFAIGDCAG 442 (643)
T ss_dssp BCSSBTEEECGGGBC
T ss_pred CceeCCEEeeecccc
Confidence 489999999999863
No 102
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=70.66 E-value=1.3 Score=33.74 Aligned_cols=40 Identities=25% Similarity=0.293 Sum_probs=31.1
Q ss_pred CCCCCCCcEEEcCCCCCCC----------CChhHHHHHHHHHHHHHhccc
Q 033665 64 GHSTPIPQLYCCGDSTFPG----------IGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~~PG----------~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
..+|..+|+|.+||.+.+. .-++-|...|+.+|+.+++..
T Consensus 266 ~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~ 315 (452)
T 3oc4_A 266 YLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEKT 315 (452)
T ss_dssp TCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSSSCC
T ss_pred CccCCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhcCCC
Confidence 3577899999999998532 255667889999999888754
No 103
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=70.59 E-value=0.83 Score=35.26 Aligned_cols=38 Identities=18% Similarity=0.189 Sum_probs=24.1
Q ss_pred CCCCCCCcEEEcCCCCCCC-------C--ChhHHHHHHHHHHHHHhc
Q 033665 64 GHSTPIPQLYCCGDSTFPG-------I--GVPAVAASGAIVANSLVS 101 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~~PG-------~--Gv~ga~~sg~~~a~~i~~ 101 (114)
..+|++||||.+|+.+..| + .+.-++..|+.+++.+.+
T Consensus 324 ~~~t~ipgLyAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a~~~~a~ 370 (472)
T 2e5v_A 324 RGESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLPRYVDS 370 (472)
T ss_dssp TCBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHGGGTTTS
T ss_pred CCccccCCEEecchhcccccCCCCCCCcccHHHHHHHHHHHHHHHHh
Confidence 4578999999999985311 1 233344557776666543
No 104
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=70.55 E-value=3.9 Score=31.49 Aligned_cols=30 Identities=10% Similarity=0.093 Sum_probs=25.4
Q ss_pred cEEEcCC---CCCCCCChhHHHHHHHHHHHHHh
Q 033665 71 QLYCCGD---STFPGIGVPAVAASGAIVANSLV 100 (114)
Q Consensus 71 nLyl~G~---~~~PG~Gv~ga~~sg~~~a~~i~ 100 (114)
|||++|. |-+.-.+++.++.+|+.||+.|+
T Consensus 420 ~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 420 CIYSRGRFGAWRYEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp TEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred CcEeecCCcccccCCCChHHHHHHHHHHHHHHH
Confidence 9999998 44411588999999999999998
No 105
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=69.74 E-value=6.3 Score=30.10 Aligned_cols=36 Identities=8% Similarity=0.062 Sum_probs=29.9
Q ss_pred CCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhccc
Q 033665 67 TPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 67 t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
|..||||++|+... +.-++.+-.-|+.+|+.+.+..
T Consensus 305 t~~p~i~aiGd~~~-~~~~~~a~~qa~~~a~~l~G~~ 340 (464)
T 2xve_A 305 EDNPKFFYIGMQDQ-WYSFNMFDAQAWYARDVIMGRL 340 (464)
T ss_dssp SSSTTEEECSCSCC-SSCHHHHHHHHHHHHHHHTTSS
T ss_pred CCCCCEEEEeCccc-ccchHHHHHHHHHHHHHHcCCC
Confidence 56899999999765 5677888889999999998764
No 106
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=69.71 E-value=5.4 Score=30.07 Aligned_cols=40 Identities=20% Similarity=0.316 Sum_probs=30.2
Q ss_pred CCCCCCCcEEEcCCCCCC-----C-----CChhHHHHHHHHHHHHHhccc
Q 033665 64 GHSTPIPQLYCCGDSTFP-----G-----IGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~~P-----G-----~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
..+|.++|+|.+||.+.+ | .-.+-|...|+.+|+.+++..
T Consensus 267 ~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g~~ 316 (449)
T 3kd9_A 267 KMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGKE 316 (449)
T ss_dssp TCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred CCccCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcCCC
Confidence 346889999999999732 1 234567788999999998764
No 107
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=69.62 E-value=2.6 Score=34.19 Aligned_cols=36 Identities=19% Similarity=0.392 Sum_probs=22.7
Q ss_pred CCCCCCCcEEEcCCCC----CC-----CCChhHHHHHHHHHHHHH
Q 033665 64 GHSTPIPQLYCCGDST----FP-----GIGVPAVAASGAIVANSL 99 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~----~P-----G~Gv~ga~~sg~~~a~~i 99 (114)
..+++|+|||.||..+ |- |.++.-++..|+.|++.+
T Consensus 380 ~~~v~IpGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~a 424 (660)
T 2bs2_A 380 RGEAKLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYF 424 (660)
T ss_dssp TSBCSSBTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHH
T ss_pred CCceecCCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHH
Confidence 3567999999999842 31 122444556677766554
No 108
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=68.83 E-value=2.1 Score=32.54 Aligned_cols=35 Identities=20% Similarity=0.372 Sum_probs=24.4
Q ss_pred CCCCcEEEcCCCC-----CCCCChhHHHHHHHHHHHHHhc
Q 033665 67 TPIPQLYCCGDST-----FPGIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 67 t~v~nLyl~G~~~-----~PG~Gv~ga~~sg~~~a~~i~~ 101 (114)
.++||||+||--+ ..|..+.-+..+|+.|++.+.+
T Consensus 402 ~~i~GLy~aGEv~~v~g~~GG~~l~~a~~~G~~Ag~~aa~ 441 (447)
T 2i0z_A 402 KFTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGE 441 (447)
T ss_dssp SSSBTEEECGGGBSCBCCTTTHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCEEEEEeeccCccCCCcHHHHHHHHHHHHHHHHHHH
Confidence 3699999998543 1223455677889988887754
No 109
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=68.62 E-value=4.3 Score=30.70 Aligned_cols=39 Identities=18% Similarity=0.251 Sum_probs=30.1
Q ss_pred CCCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhccc
Q 033665 65 HSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
.+|..+|+|.+||.+.+..-.+.+...|+.+|+.+++..
T Consensus 290 ~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~ 328 (455)
T 2yqu_A 290 LRTRVPHIYAIGDVVRGPMLAHKASEEGIAAVEHMVRGF 328 (455)
T ss_dssp SBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHSC
T ss_pred cccCCCCEEEEecCCCCccCHHHHHHhHHHHHHHHcCCC
Confidence 467789999999998643445567788999999988643
No 110
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=68.01 E-value=3.1 Score=31.18 Aligned_cols=39 Identities=28% Similarity=0.320 Sum_probs=30.2
Q ss_pred CCCCCCcEEEcCCCCCCCC----------ChhHHHHHHHHHHHHHhccc
Q 033665 65 HSTPIPQLYCCGDSTFPGI----------GVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG~----------Gv~ga~~sg~~~a~~i~~~~ 103 (114)
.+|..+|+|.+||.+.+.. -+..|...|+.+|..+++..
T Consensus 261 ~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 309 (408)
T 2gqw_A 261 GRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPT 309 (408)
T ss_dssp CBCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCTT
T ss_pred CccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCCC
Confidence 4678999999999975321 24578889999999998754
No 111
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=67.56 E-value=3.7 Score=31.06 Aligned_cols=40 Identities=15% Similarity=0.134 Sum_probs=31.0
Q ss_pred CCCCCCCcEEEcCCCCCCC----------CChhHHHHHHHHHHHHHhccc
Q 033665 64 GHSTPIPQLYCCGDSTFPG----------IGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~~PG----------~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
..+|..+|+|.+||.+.+. .-++-|...|+.+|+.+++..
T Consensus 269 ~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 318 (452)
T 2cdu_A 269 YMHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTEDK 318 (452)
T ss_dssp TSBCSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSSCC
T ss_pred CcCcCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCCCC
Confidence 3467899999999998521 346678889999999998753
No 112
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=66.64 E-value=19 Score=28.46 Aligned_cols=40 Identities=13% Similarity=0.018 Sum_probs=26.9
Q ss_pred CCCCC-CCCcEEEcCCCCCCCCC----hhHHHHHHHHHHHHHhcc
Q 033665 63 PGHST-PIPQLYCCGDSTFPGIG----VPAVAASGAIVANSLVSV 102 (114)
Q Consensus 63 p~~~t-~v~nLyl~G~~~~PG~G----v~ga~~sg~~~a~~i~~~ 102 (114)
+..|. .++|||.+++|++|-.. ...+++=|..+|+.|+++
T Consensus 538 ~~lrV~Gv~nLrVvDaSv~P~~~~~Np~~ti~aiAeraAd~I~~~ 582 (587)
T 1gpe_A 538 ATAKVYGTQGLRVIDGSIPPTQVSSHVMTIFYGMALKVADAILDD 582 (587)
T ss_dssp TTCBBTTCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEECCCCcEEeeeccCCCCCCcchHHHHHHHHHHHHHHHHhh
Confidence 44443 49999999999998532 224445566677777654
No 113
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=65.57 E-value=21 Score=27.90 Aligned_cols=41 Identities=20% Similarity=0.152 Sum_probs=26.0
Q ss_pred CCCCC-CCCcEEEcCCCCCCCCC----hhHHHHHHHHHHHHHhccc
Q 033665 63 PGHST-PIPQLYCCGDSTFPGIG----VPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 63 p~~~t-~v~nLyl~G~~~~PG~G----v~ga~~sg~~~a~~i~~~~ 103 (114)
+..+. .++|||.+.+|++|-.+ ...+++=|..+|+.|+++.
T Consensus 485 ~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~ 530 (546)
T 2jbv_A 485 PELRVKGVTGLRVADASVMPEHVTVNPNITVMMIGERCADLIRSAR 530 (546)
T ss_dssp TTCBBTTSBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHC----
T ss_pred CCCEEECCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHhhc
Confidence 44444 49999999999998542 2344556777888887654
No 114
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=65.36 E-value=3.9 Score=31.07 Aligned_cols=31 Identities=32% Similarity=0.273 Sum_probs=20.1
Q ss_pred CCCcEEEcC---CCCCCCCChh--HHHHHHHHHHHH
Q 033665 68 PIPQLYCCG---DSTFPGIGVP--AVAASGAIVANS 98 (114)
Q Consensus 68 ~v~nLyl~G---~~~~PG~Gv~--ga~~sg~~~a~~ 98 (114)
.+||||+|| |+.-|-+|.- .|..||+.|++.
T Consensus 381 ~~~gLy~aGE~lD~~~~~GGynlq~a~stG~~ag~~ 416 (417)
T 3v76_A 381 EVPGLYFVGECVDVTGWLGGYNFQWAWASGFVAGQD 416 (417)
T ss_dssp TSTTEEECGGGBSEEECSSSHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEeEecccCCCCHHHHHHHHHHHHHhCc
Confidence 499999999 3433344543 455678876653
No 115
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=65.33 E-value=4.4 Score=31.03 Aligned_cols=39 Identities=13% Similarity=0.173 Sum_probs=30.0
Q ss_pred CCCCCCcEEEcCCCCCCC----------CChhHHHHHHHHHHHHHhccc
Q 033665 65 HSTPIPQLYCCGDSTFPG----------IGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG----------~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
.+|..+|+|.+||.+.+. .-++-|...|+.+|+.+++..
T Consensus 306 ~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 354 (480)
T 3cgb_A 306 MQTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLDKR 354 (480)
T ss_dssp SBCSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred ccCCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcCCC
Confidence 467799999999997432 125678889999999998753
No 116
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=65.25 E-value=3.8 Score=33.09 Aligned_cols=35 Identities=29% Similarity=0.334 Sum_probs=29.2
Q ss_pred CCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhcc
Q 033665 67 TPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 67 t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~ 102 (114)
|.++|+|.+||.+.|+ .+.-|+..|+.+|..|.+.
T Consensus 639 t~~~~VyaiGD~~~~~-~~~~A~~~g~~aa~~i~~~ 673 (690)
T 3k30_A 639 GEIASVRGIGDAWAPG-TIAAAVWSGRRAAEEFDAV 673 (690)
T ss_dssp TSCSEEEECGGGTSCB-CHHHHHHHHHHHHHHTTCC
T ss_pred cCCCCEEEEeCCCchh-hHHHHHHHHHHHHHHHHhh
Confidence 4689999999999865 4555889999999999876
No 117
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=65.15 E-value=5 Score=30.32 Aligned_cols=33 Identities=30% Similarity=0.391 Sum_probs=27.8
Q ss_pred CCcEEEcCCCCCC-----CCChhHHHHHHHHHHHHHhc
Q 033665 69 IPQLYCCGDSTFP-----GIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 69 v~nLyl~G~~~~P-----G~Gv~ga~~sg~~~a~~i~~ 101 (114)
-.|+.++||.+|. |.|+..++.+|..+|+.+.+
T Consensus 281 ~~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~ 318 (453)
T 3atr_A 281 WNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILS 318 (453)
T ss_dssp ETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHHH
Confidence 4789999998643 78999999999999998853
No 118
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=65.08 E-value=5 Score=31.12 Aligned_cols=40 Identities=20% Similarity=0.210 Sum_probs=26.2
Q ss_pred CCCCC-CCCcEEEcCCCCCCCCC----hhHHHHHHHHHHHHHhcc
Q 033665 63 PGHST-PIPQLYCCGDSTFPGIG----VPAVAASGAIVANSLVSV 102 (114)
Q Consensus 63 p~~~t-~v~nLyl~G~~~~PG~G----v~ga~~sg~~~a~~i~~~ 102 (114)
+..+. .++|||.|++|++|-.+ ...+++=|..+|+.|+++
T Consensus 460 ~~~rV~Gv~nLrVvDaSv~P~~~~~Np~~ti~alAeraAd~I~~~ 504 (507)
T 1coy_A 460 NFGRLPEYPGLYVVDGSLVPGNVGVNPFVTITALAERNMDKIISS 504 (507)
T ss_dssp TTSBCTTSTTEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEeccCCeEEeechhccCCCCcChHHHHHHHHHHHHHHHHHH
Confidence 44444 49999999999998643 223444556666666544
No 119
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=64.88 E-value=3.3 Score=31.31 Aligned_cols=39 Identities=21% Similarity=0.190 Sum_probs=30.1
Q ss_pred CCCCCCcEEEcCCCCCCCC----------ChhHHHHHHHHHHHHHhccc
Q 033665 65 HSTPIPQLYCCGDSTFPGI----------GVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG~----------Gv~ga~~sg~~~a~~i~~~~ 103 (114)
.+|..+|+|.+||.+.+.. -+.-|...|+.+|..+++..
T Consensus 272 ~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 320 (431)
T 1q1r_A 272 MQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGKV 320 (431)
T ss_dssp SBCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTTCC
T ss_pred cccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcCCC
Confidence 4678999999999974321 24668889999999998754
No 120
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=64.82 E-value=2.1 Score=32.99 Aligned_cols=38 Identities=18% Similarity=0.329 Sum_probs=28.0
Q ss_pred CCCC-CCcEEEcCCCCCCCCC-hhHHHHHHHHHHHHHhcc
Q 033665 65 HSTP-IPQLYCCGDSTFPGIG-VPAVAASGAIVANSLVSV 102 (114)
Q Consensus 65 ~~t~-v~nLyl~G~~~~PG~G-v~ga~~sg~~~a~~i~~~ 102 (114)
.+|. ++|+|.+|+.+....| +..++..|+.+|..++..
T Consensus 354 ~rt~~~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~~i~~~ 393 (460)
T 1cjc_A 354 GRVVDVPGLYCSGWVKRGPTGVITTTMTDSFLTGQILLQD 393 (460)
T ss_dssp TEETTCTTEEECTHHHHCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CcCcCCCCEEEEEeCCcCCCccHHHHHHHHHHHHHHHHHH
Confidence 3555 7999999998752234 557888999988888653
No 121
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=64.61 E-value=1.1 Score=35.83 Aligned_cols=33 Identities=18% Similarity=0.315 Sum_probs=21.8
Q ss_pred CCCcEEEcCCC----CC-----CCCChhHHHHHHHHHHHHHh
Q 033665 68 PIPQLYCCGDS----TF-----PGIGVPAVAASGAIVANSLV 100 (114)
Q Consensus 68 ~v~nLyl~G~~----~~-----PG~Gv~ga~~sg~~~a~~i~ 100 (114)
+|+|||.||.. +| +|.++.-++..|+.|++.+.
T Consensus 379 ~I~GLyAaGe~a~~g~hG~nrl~gnsl~~~~vfG~~Ag~~aa 420 (588)
T 2wdq_A 379 VVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQ 420 (588)
T ss_dssp EEEEEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHTHH
T ss_pred eeCCceeCccccccCCCCCCCCcchhHHHHHHHHHHHHHHHH
Confidence 79999999984 33 12235556677777766543
No 122
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=63.54 E-value=2.7 Score=32.29 Aligned_cols=36 Identities=14% Similarity=0.099 Sum_probs=26.9
Q ss_pred CCCCcEEEcCCCCC-CCCChhHHHHHHHHHHHHHhcc
Q 033665 67 TPIPQLYCCGDSTF-PGIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 67 t~v~nLyl~G~~~~-PG~Gv~ga~~sg~~~a~~i~~~ 102 (114)
+.++|+|.+|+.+. |.+-+..++..|+.+|..|+.+
T Consensus 349 t~~pgvya~GD~~~gp~~~i~~a~~~g~~~a~~i~~~ 385 (456)
T 1lqt_A 349 NGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKN 385 (456)
T ss_dssp TTCSSEEECTHHHHCSCSCTTHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHHH
Confidence 56899999999874 3333445778888888888754
No 123
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=63.26 E-value=4.9 Score=33.21 Aligned_cols=35 Identities=14% Similarity=0.041 Sum_probs=27.8
Q ss_pred CCCcEEEcCCCC-CCCCChhHHHHHHHHHHHHHhcc
Q 033665 68 PIPQLYCCGDST-FPGIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 68 ~v~nLyl~G~~~-~PG~Gv~ga~~sg~~~a~~i~~~ 102 (114)
+-.++||||+.+ +.++=+-||+.||..|+..|...
T Consensus 643 ~~gri~fAGe~~S~~~GWieGAl~Sa~~Aa~~i~~~ 678 (721)
T 3ayj_A 643 LDNRFFIASDSYSHLGGWLEGAFMSALNAVAGLIVR 678 (721)
T ss_dssp TCCCEEECSGGGSSCTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeehhhccCCceehHHHHHHHHHHHHHHHH
Confidence 457899999996 43344779999999999888764
No 124
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=62.96 E-value=7 Score=28.66 Aligned_cols=33 Identities=18% Similarity=0.293 Sum_probs=28.1
Q ss_pred CcEEEcCCCCCC-----CCChhHHHHHHHHHHHHHhcc
Q 033665 70 PQLYCCGDSTFP-----GIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 70 ~nLyl~G~~~~P-----G~Gv~ga~~sg~~~a~~i~~~ 102 (114)
.++.++||.+|+ |.|+..++..|...|+.+...
T Consensus 262 grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~~ 299 (381)
T 3c4a_A 262 GKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCTE 299 (381)
T ss_dssp TTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHHS
T ss_pred CCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhcc
Confidence 679999999864 779999999999999988653
No 125
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=61.84 E-value=5.7 Score=30.46 Aligned_cols=39 Identities=21% Similarity=0.313 Sum_probs=30.3
Q ss_pred CCCCCCcEEEcCCCCCCC----------CChhHHHHHHHHHHHHHhccc
Q 033665 65 HSTPIPQLYCCGDSTFPG----------IGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG----------~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
.+|..+|+|.+||.+.+. .-++-|...|+.+|..+++..
T Consensus 314 ~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 362 (490)
T 2bc0_A 314 QETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTD 362 (490)
T ss_dssp CBCSSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred cccCCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcCCC
Confidence 467899999999987521 235677889999999998753
No 126
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=61.64 E-value=6.5 Score=29.79 Aligned_cols=40 Identities=20% Similarity=0.229 Sum_probs=29.6
Q ss_pred CCCCCCCcEEEcCCCCC-CC---------CChhHHHHHHHHHHHHHhccc
Q 033665 64 GHSTPIPQLYCCGDSTF-PG---------IGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~~-PG---------~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
..+|.++|+|.+||.+. |. .-..-+...|+.+|+.+++.+
T Consensus 263 ~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~~ 312 (437)
T 4eqs_A 263 KFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGND 312 (437)
T ss_dssp TCBCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHSCT
T ss_pred CccCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcCCC
Confidence 35788999999999862 11 124456778999999998764
No 127
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=61.18 E-value=11 Score=29.85 Aligned_cols=39 Identities=28% Similarity=0.374 Sum_probs=29.5
Q ss_pred CCCCCCcEEEcCCCCCCC-CChhHHHHHHHHHHHHHhccc
Q 033665 65 HSTPIPQLYCCGDSTFPG-IGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG-~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
.+|.++|+|.+||.+-.. .=.+-+...|+.+++.+++..
T Consensus 346 ~~Ts~p~IyAiGDv~~~~p~La~~A~~eg~~aa~~i~g~~ 385 (542)
T 4b1b_A 346 SCTNIPSIFAVGDVAENVPELAPVAIKAGEILARRLFKDS 385 (542)
T ss_dssp SBCSSTTEEECTTSBTTCCCCHHHHHHHHHHHHHHHHSCC
T ss_pred ccccCCCeEEeccccCCchhHHHHHHHHHHHHHHHHhcCC
Confidence 468899999999997411 234566678899999998764
No 128
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=60.93 E-value=8.4 Score=29.79 Aligned_cols=39 Identities=21% Similarity=0.334 Sum_probs=29.3
Q ss_pred CCCCCCcEEEcCCCCC-C----CC-----ChhHHHHHHHHHHHHHhccc
Q 033665 65 HSTPIPQLYCCGDSTF-P----GI-----GVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~-P----G~-----Gv~ga~~sg~~~a~~i~~~~ 103 (114)
.+|..+|+|.+||.+. | |. -+.-|...|+.+|+.+++.+
T Consensus 291 ~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 339 (565)
T 3ntd_A 291 MQTSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFGRE 339 (565)
T ss_dssp CBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred cccCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcCCC
Confidence 5678999999999862 1 11 24467788999999998765
No 129
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=60.56 E-value=8.4 Score=31.27 Aligned_cols=15 Identities=27% Similarity=0.625 Sum_probs=13.0
Q ss_pred CCCCCCcEEEcCCCC
Q 033665 65 HSTPIPQLYCCGDST 79 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~ 79 (114)
.+|.|+|||.||+.+
T Consensus 448 ~~t~v~gl~a~Ge~~ 462 (662)
T 3gyx_A 448 RMTTVEGLWTCADGV 462 (662)
T ss_dssp TBCSSBTEECCSSSB
T ss_pred CCCccCCeEeCcccc
Confidence 468899999999975
No 130
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=59.64 E-value=7.6 Score=32.99 Aligned_cols=37 Identities=14% Similarity=0.059 Sum_probs=29.4
Q ss_pred CCCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhc
Q 033665 65 HSTPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~ 101 (114)
.+|.++|+|.+||.+....-+.-|+..|+.||..|.+
T Consensus 469 ~~Ts~~~VfA~GD~~~~~~~~~~A~~~G~~aA~~i~~ 505 (1025)
T 1gte_A 469 MQTSEPWVFAGGDIVGMANTTVESVNDGKQASWYIHK 505 (1025)
T ss_dssp CBCSSTTEEECSGGGCSCCCHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEeCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 4678999999999986223566778899999998874
No 131
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=58.92 E-value=11 Score=27.74 Aligned_cols=34 Identities=15% Similarity=0.176 Sum_probs=29.1
Q ss_pred CCcEEEcCCCCCC-----CCChhHHHHHHHHHHHHHhcc
Q 033665 69 IPQLYCCGDSTFP-----GIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 69 v~nLyl~G~~~~P-----G~Gv~ga~~sg~~~a~~i~~~ 102 (114)
-.++.++||.+|. |.|+..++..|...++.+...
T Consensus 300 ~~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~ 338 (407)
T 3rp8_A 300 RGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQT 338 (407)
T ss_dssp ETTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHHHHSC
T ss_pred cCCEEEEEcccccCCcchhhhHHHHHHHHHHHHHHHhcC
Confidence 4689999999864 789999999999999998754
No 132
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=57.88 E-value=4.7 Score=30.62 Aligned_cols=39 Identities=18% Similarity=0.262 Sum_probs=29.1
Q ss_pred CCCCCCcEEEcCCCCCC-----C-----CChhHHHHHHHHHHHHHhccc
Q 033665 65 HSTPIPQLYCCGDSTFP-----G-----IGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~P-----G-----~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
.+|.++|+|.+||.+.. | .-..-|...|+.+|+.+++.+
T Consensus 282 ~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 330 (472)
T 3iwa_A 282 MRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADGD 330 (472)
T ss_dssp CBCSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTTCC
T ss_pred cccCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcCCC
Confidence 56789999999998721 1 123457788999999998764
No 133
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=57.79 E-value=9.8 Score=27.29 Aligned_cols=36 Identities=17% Similarity=0.207 Sum_probs=29.1
Q ss_pred CCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhcccch
Q 033665 68 PIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVSQH 105 (114)
Q Consensus 68 ~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~~~~ 105 (114)
..+|||++.... |.|+..+...|+.+|+.|++.+..
T Consensus 326 ~~~~l~~a~G~~--g~G~~~ap~~g~~la~~i~g~~~~ 361 (381)
T 3nyc_A 326 NAEGFFWVAAQG--GYGIQTSAAMGEASAALIRHQPLP 361 (381)
T ss_dssp TSTTEEEEECCT--TCTTTTHHHHHHHHHHHHTTCCCC
T ss_pred CCCCeEEEEcCC--ChhHhhCHHHHHHHHHHHhCCCCC
Confidence 368999885543 679988889999999999987644
No 134
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=57.30 E-value=10 Score=27.94 Aligned_cols=34 Identities=12% Similarity=0.176 Sum_probs=28.1
Q ss_pred CCcEEEcCCCCCC-----CCChhHHHHHHHHHHHHHhcc
Q 033665 69 IPQLYCCGDSTFP-----GIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 69 v~nLyl~G~~~~P-----G~Gv~ga~~sg~~~a~~i~~~ 102 (114)
-.++.|+||.+|+ |.|+..++..|...|+.+.+.
T Consensus 298 ~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~ 336 (397)
T 2vou_A 298 HGRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTKN 336 (397)
T ss_dssp ETTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHHC
T ss_pred cCcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhcC
Confidence 4689999999864 678888999999998888653
No 135
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=56.06 E-value=14 Score=27.64 Aligned_cols=38 Identities=13% Similarity=0.078 Sum_probs=25.0
Q ss_pred CCCC-CCCcEEEcCCCCCC-C-----------CChhHHHHHHHHHHHHHhc
Q 033665 64 GHST-PIPQLYCCGDSTFP-G-----------IGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 64 ~~~t-~v~nLyl~G~~~~P-G-----------~Gv~ga~~sg~~~a~~i~~ 101 (114)
..++ ..+|+|.+||.+.. + .-...|...|+.+|+.|..
T Consensus 280 ~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~ 330 (430)
T 3h28_A 280 CFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVN 330 (430)
T ss_dssp TSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 3455 69999999999752 1 1123455677777777654
No 136
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=56.02 E-value=12 Score=27.75 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=24.3
Q ss_pred CCCcEEEcCCCC-------CCCCChhHHHHHHHHHHHHHhcc
Q 033665 68 PIPQLYCCGDST-------FPGIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 68 ~v~nLyl~G~~~-------~PG~Gv~ga~~sg~~~a~~i~~~ 102 (114)
-+||||.+|-.+ --|+=+-+-++||+.+|+.++++
T Consensus 282 ~~~~~~~~g~~~~~~~~~~r~g~~fg~m~~sg~~~a~~~~~~ 323 (326)
T 2gjc_A 282 GVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKH 323 (326)
T ss_dssp TSTTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHH
T ss_pred ccCCEEECChHHHHhcCCCCCChhhhhhhhhhHHHHHHHHHH
Confidence 589999999543 32222334456999999999765
No 137
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=55.84 E-value=6.3 Score=32.10 Aligned_cols=36 Identities=22% Similarity=0.339 Sum_probs=29.3
Q ss_pred CCCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhcc
Q 033665 66 STPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 66 ~t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~ 102 (114)
+|.++|+|.+||.+.|. -+.-|+..|+.+|..|.+.
T Consensus 663 ~t~~~~VyAiGD~~~~~-~~~~A~~~G~~aA~~i~~~ 698 (729)
T 1o94_A 663 ENDIKGIYLIGDAEAPR-LIADATFTGHRVAREIEEA 698 (729)
T ss_dssp GGTCCEEEECGGGTSCC-CHHHHHHHHHHHHHTTTSS
T ss_pred ccCCCCeEEEeCccchh-hHHHHHHHHHHHHHHhhhh
Confidence 35689999999998864 4566888999999998764
No 138
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=55.55 E-value=6 Score=29.83 Aligned_cols=39 Identities=18% Similarity=0.260 Sum_probs=30.2
Q ss_pred CCCCCCcEEEcCCCCCCC----------CChhHHHHHHHHHHHHHhccc
Q 033665 65 HSTPIPQLYCCGDSTFPG----------IGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 65 ~~t~v~nLyl~G~~~~PG----------~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
.+|..+|+|.+||.+.+. .-++-|...|+.+|+.+++..
T Consensus 269 ~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 317 (447)
T 1nhp_A 269 MRTSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEEPV 317 (447)
T ss_dssp CBCSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSSSCC
T ss_pred ccCCCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhcCCC
Confidence 467899999999997521 235678889999999998753
No 139
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=55.44 E-value=6.6 Score=28.71 Aligned_cols=33 Identities=12% Similarity=0.157 Sum_probs=28.0
Q ss_pred CcEEEcCCCCCC-----CCChhHHHHHHHHHHHHHhcc
Q 033665 70 PQLYCCGDSTFP-----GIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 70 ~nLyl~G~~~~P-----G~Gv~ga~~sg~~~a~~i~~~ 102 (114)
.++.++||.+|. |.|+..++.+|...++.+.+.
T Consensus 281 ~rv~lvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~ 318 (379)
T 3alj_A 281 GKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEEG 318 (379)
T ss_dssp TTEEECTHHHHCCCGGGSCHHHHHHHHHHHHHHHTTSS
T ss_pred CcEEEEEcccCCCCcchhhhHHHHHHHHHHHHHHhccc
Confidence 589999998743 779999999999999998764
No 140
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=54.83 E-value=11 Score=26.99 Aligned_cols=34 Identities=15% Similarity=0.087 Sum_probs=27.9
Q ss_pred CCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhcccc
Q 033665 69 IPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVSQ 104 (114)
Q Consensus 69 v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~~~ 104 (114)
.+|||++.... |.|+..+...|+.+|+.|++.+.
T Consensus 326 ~~~l~~~~G~~--g~G~~~ap~~g~~la~~i~~~~~ 359 (372)
T 2uzz_A 326 HDNTLLITGLS--GHGFKFASVLGEIAADFAQDKKS 359 (372)
T ss_dssp EEEEEEECCCC--SCCGGGHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEEeCCC--ccchhccHHHHHHHHHHHhCCCC
Confidence 67999885543 67999999999999999998653
No 141
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=54.35 E-value=8.4 Score=27.90 Aligned_cols=33 Identities=21% Similarity=0.319 Sum_probs=27.6
Q ss_pred CCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhccc
Q 033665 69 IPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 69 v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
.+|||++... -|.|+..+...|+.+|+.+++..
T Consensus 324 ~~~~~~~~G~--~g~G~~~a~~~g~~la~~i~~~~ 356 (382)
T 1y56_B 324 LNDYYIAAGF--SGHGFMMAPAVGEMVAELITKGK 356 (382)
T ss_dssp SBTEEEEECC--TTCHHHHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEEec--CcchHhhhHHHHHHHHHHHhCCC
Confidence 6899988544 37899999999999999998764
No 142
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=54.16 E-value=9.5 Score=27.59 Aligned_cols=33 Identities=27% Similarity=0.374 Sum_probs=27.1
Q ss_pred CCcEEEcCCCCCC-----CCChhHHHHHHHHHHHHHhc
Q 033665 69 IPQLYCCGDSTFP-----GIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 69 v~nLyl~G~~~~P-----G~Gv~ga~~sg~~~a~~i~~ 101 (114)
-+|+.++||.+|. |.|+..++.+|..+|+.+.+
T Consensus 276 ~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~ 313 (397)
T 3cgv_A 276 MPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKE 313 (397)
T ss_dssp ETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred eCCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 5789999998753 67999999999988887764
No 143
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=53.25 E-value=11 Score=29.21 Aligned_cols=40 Identities=15% Similarity=0.153 Sum_probs=26.2
Q ss_pred CCCCC-CCCcEEEcCCCCCCCCC----hhHHHHHHHHHHHHHhcc
Q 033665 63 PGHST-PIPQLYCCGDSTFPGIG----VPAVAASGAIVANSLVSV 102 (114)
Q Consensus 63 p~~~t-~v~nLyl~G~~~~PG~G----v~ga~~sg~~~a~~i~~~ 102 (114)
+..+. .++|||.+++|++|-.+ ...+++=|..+|+.|+++
T Consensus 455 ~~~rV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~ 499 (504)
T 1n4w_A 455 DYGRVAGYKNLYVTDGSLIPGSVGVNPFVTITALAERNVERIIKQ 499 (504)
T ss_dssp TTSBBTTCSSEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEeccCCeEEeeccccCCCCCcChHHHHHHHHHHHHHHHHHh
Confidence 34443 49999999999998642 223444566677777644
No 144
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=52.84 E-value=14 Score=26.39 Aligned_cols=37 Identities=22% Similarity=0.211 Sum_probs=23.1
Q ss_pred CCCCCcEEEcCCCCC-CCC---ChhHHHHHHHHHHHHHhcc
Q 033665 66 STPIPQLYCCGDSTF-PGI---GVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 66 ~t~v~nLyl~G~~~~-PG~---Gv~ga~~sg~~~a~~i~~~ 102 (114)
+|..+|+|.+||.+. |+. .+..+-..|+.+|+.+.+.
T Consensus 297 ~t~~~~v~a~GD~~~~~~~~~~~~~~~~~~a~~~a~~l~~~ 337 (369)
T 3d1c_A 297 STRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQR 337 (369)
T ss_dssp BSSSTTEEECSTTCCCSSCCCCSHHHHGGGHHHHHHHHHHH
T ss_pred ccCCCCeEEeccccccCCeeEEEEehhhHHHHHHHHHHhcc
Confidence 467899999999864 222 2223334466666666554
No 145
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=52.34 E-value=8.6 Score=28.23 Aligned_cols=33 Identities=18% Similarity=0.063 Sum_probs=28.3
Q ss_pred CCcEEEcCCCCC-----CCCChhHHHHHHHHHHHHHhc
Q 033665 69 IPQLYCCGDSTF-----PGIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 69 v~nLyl~G~~~~-----PG~Gv~ga~~sg~~~a~~i~~ 101 (114)
-+|+.++||.++ -|.|+..++.+|..+|+.+.+
T Consensus 287 ~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l~~ 324 (421)
T 3nix_A 287 GDGFVLTGNATEFLDPIFSSGATFAMESGSKGGKLAVQ 324 (421)
T ss_dssp ETTEEECGGGTCBCCSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEecccccccCCcccccHHHHHHHHHHHHHHHHH
Confidence 489999999875 378999999999999998865
No 146
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=51.76 E-value=9.3 Score=28.68 Aligned_cols=34 Identities=21% Similarity=0.039 Sum_probs=23.4
Q ss_pred CCCCcEEEcCCCCC---CCCCh--hHHHHHHHHHHHHHh
Q 033665 67 TPIPQLYCCGDSTF---PGIGV--PAVAASGAIVANSLV 100 (114)
Q Consensus 67 t~v~nLyl~G~~~~---PG~Gv--~ga~~sg~~~a~~i~ 100 (114)
+.+||||+||.-.. |-+|. --|..||+.|++.+.
T Consensus 361 ~~~~gly~~GE~ldv~g~~GGynlq~a~~sg~~ag~~~~ 399 (401)
T 2gqf_A 361 NQVSGLYFIGEVLDVTGWLGGYNFQWAWSSAYACALSIS 399 (401)
T ss_dssp SSSTTEEECGGGBSCEECTTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEEeEEeccCCCCHHHHHHHHHHHHHHHHHh
Confidence 36999999997532 23343 357778988888763
No 147
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=51.75 E-value=13 Score=28.96 Aligned_cols=38 Identities=18% Similarity=0.215 Sum_probs=28.4
Q ss_pred CCCCCCCcEEEcCCCCCC-----C-----CChhHHHHHHHHHHHHHhc
Q 033665 64 GHSTPIPQLYCCGDSTFP-----G-----IGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 64 ~~~t~v~nLyl~G~~~~P-----G-----~Gv~ga~~sg~~~a~~i~~ 101 (114)
..+|.++|+|.+||.+.. | .-..-|...|+.+|+.+++
T Consensus 305 ~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 352 (588)
T 3ics_A 305 KFQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHG 352 (588)
T ss_dssp TSBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred ccccCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcC
Confidence 356889999999999731 1 1234567789999999987
No 148
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=51.67 E-value=12 Score=27.53 Aligned_cols=39 Identities=18% Similarity=0.153 Sum_probs=26.7
Q ss_pred CCCC-CCCcEEEcCCCCC-CCC-ChhHHHHHHHHHHHHHhcc
Q 033665 64 GHST-PIPQLYCCGDSTF-PGI-GVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 64 ~~~t-~v~nLyl~G~~~~-PG~-Gv~ga~~sg~~~a~~i~~~ 102 (114)
..++ ..+|+|.+||.+. |.+ -...|...|+.+|+.|...
T Consensus 293 ~~~~~~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~ 334 (409)
T 3h8l_A 293 NMVSIKYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANR 334 (409)
T ss_dssp TSBBSSCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 3455 5899999999975 332 2345666788888777654
No 149
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=51.62 E-value=9.6 Score=28.17 Aligned_cols=34 Identities=18% Similarity=0.188 Sum_probs=28.0
Q ss_pred CCcEEEcCCCCCC-----CCChhHHHHHHHHHHHHHhcc
Q 033665 69 IPQLYCCGDSTFP-----GIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 69 v~nLyl~G~~~~P-----G~Gv~ga~~sg~~~a~~i~~~ 102 (114)
-.++.++||.+|. |.|+..++..|...+..+...
T Consensus 302 ~grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~ 340 (410)
T 3c96_A 302 RGRITLLGDAAHLMYPMGANGASQAILDGIELAAALARN 340 (410)
T ss_dssp BTTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHHC
T ss_pred cCCEEEEecccCCCCCccchhHHHHHHHHHHHHHHHhcc
Confidence 3689999999643 679999999999999988653
No 150
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=51.20 E-value=11 Score=31.76 Aligned_cols=34 Identities=12% Similarity=0.165 Sum_probs=28.1
Q ss_pred CCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhc
Q 033665 67 TPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 67 t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~ 101 (114)
|.++|+|.+||.+-+ .++..++..|+.+|..+.+
T Consensus 408 ts~p~IyAaGD~a~~-~~l~~A~~~G~~aA~~i~~ 441 (965)
T 2gag_A 408 DAVANQHLAGAMTGR-LDTASALSTGAATGAAAAT 441 (965)
T ss_dssp SCCTTEEECGGGGTC-CSHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEecCCc-hhHHHHHHHHHHHHHHHHH
Confidence 679999999999863 4677788889999988865
No 151
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=50.90 E-value=19 Score=19.00 Aligned_cols=20 Identities=15% Similarity=-0.052 Sum_probs=17.4
Q ss_pred hhHHHHHHHHHHHHHHHHhC
Q 033665 2 KILSVLKYCVIWRAVERALG 21 (114)
Q Consensus 2 ~~~K~~~~~~il~~l~~~~g 21 (114)
.+.|+++.+.+.+.+.+.+|
T Consensus 13 ~eqk~~l~~~i~~~l~~~lg 32 (61)
T 2opa_A 13 DEQKRNLVEKVTEAVKETTG 32 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 46799999999999999874
No 152
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=50.67 E-value=11 Score=30.65 Aligned_cols=38 Identities=18% Similarity=0.254 Sum_probs=24.7
Q ss_pred CCCC-CCcEEEcCCCCCCCCChhHHHH----HHHHHHHHHhccc
Q 033665 65 HSTP-IPQLYCCGDSTFPGIGVPAVAA----SGAIVANSLVSVS 103 (114)
Q Consensus 65 ~~t~-v~nLyl~G~~~~PG~Gv~ga~~----sg~~~a~~i~~~~ 103 (114)
..+. ++|||+||+-.- ..|..-|.. +|.+++..+.+++
T Consensus 373 le~k~~~gLf~AGqi~g-~~Gy~eA~a~G~~AG~naa~~~~~~~ 415 (641)
T 3cp8_A 373 METRPVENLFFAGQING-TSGYEEAAAQGLMAGINAVRKILGKE 415 (641)
T ss_dssp SBBSSSBTEEECSGGGT-BCCHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred ccccCcCCEEEEEeecC-CccHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3453 999999999875 346654444 4556666665543
No 153
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=49.71 E-value=18 Score=19.08 Aligned_cols=20 Identities=10% Similarity=-0.059 Sum_probs=17.3
Q ss_pred hhHHHHHHHHHHHHHHHHhC
Q 033665 2 KILSVLKYCVIWRAVERALG 21 (114)
Q Consensus 2 ~~~K~~~~~~il~~l~~~~g 21 (114)
.+.|+++.+.+.+.+.+.+|
T Consensus 13 ~e~k~~l~~~i~~~l~~~lg 32 (62)
T 1otf_A 13 DEQKETLIRQVSEAMANSLD 32 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 46799999999999999874
No 154
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=45.26 E-value=18 Score=27.72 Aligned_cols=34 Identities=15% Similarity=0.102 Sum_probs=27.3
Q ss_pred CCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhcc
Q 033665 68 PIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 68 ~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~ 102 (114)
..+|+|.+||.+.++ .+..++..|+.+|..+.+.
T Consensus 342 s~~~vya~GD~~~~~-~~~~A~~~g~~aa~~i~~~ 375 (493)
T 1y56_A 342 IKDGIYVAGSAVSIK-PHYANYLEGKLVGAYILKE 375 (493)
T ss_dssp EETTEEECSTTTCCC-CHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeccCCcc-CHHHHHHHHHHHHHHHHHH
Confidence 468999999998754 5667788999999888663
No 155
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=44.75 E-value=18 Score=29.56 Aligned_cols=39 Identities=18% Similarity=0.155 Sum_probs=25.6
Q ss_pred CCCCC-CCcEEEcCCCCCCCCChhHHH----HHHHHHHHHHhccc
Q 033665 64 GHSTP-IPQLYCCGDSTFPGIGVPAVA----ASGAIVANSLVSVS 103 (114)
Q Consensus 64 ~~~t~-v~nLyl~G~~~~PG~Gv~ga~----~sg~~~a~~i~~~~ 103 (114)
...+. ++|||++||-.-+ .|..-|. ++|.+||..+.+++
T Consensus 378 tle~k~~~gLf~AGqinGt-tGYeEAaaqGl~AG~nAa~~~~~~~ 421 (651)
T 3ces_A 378 TLESKFIQGLFFAGQINGT-TGYEEAAAQGLLAGLNAARLSADKE 421 (651)
T ss_dssp TSBBSSSBTEEECSGGGTC-CCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cccccCCCCeEEEEEecCC-cChHHHHHHHHHHHHHHHHHhcCCC
Confidence 34443 9999999998743 4655443 45667777776654
No 156
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=43.78 E-value=55 Score=26.05 Aligned_cols=67 Identities=7% Similarity=0.035 Sum_probs=38.7
Q ss_pred CHHHHHHHhCCCCCC-CCCCCCCC-----CcCC--CCCCC-CCCcEEEcCCCCCCCC--C--hhHHHHHHHHHHHHHhcc
Q 033665 36 TPLTHQRFLRRNRGT-YGPAIQAG-----KETF--PGHST-PIPQLYCCGDSTFPGI--G--VPAVAASGAIVANSLVSV 102 (114)
Q Consensus 36 TP~t~~~~~~~~~G~-~G~~~~~~-----q~~~--p~~~t-~v~nLyl~G~~~~PG~--G--v~ga~~sg~~~a~~i~~~ 102 (114)
|-.+++.|......+ |+...+-. ..+. +..|. .++||+.+.+|++|-. | ...+++=|..+|+.|+++
T Consensus 499 sd~~~~~~~r~~~~t~~H~~GTc~Mg~~~~~~VVD~~lrV~Gv~~LrVvDaSv~P~~~~~n~~~t~~aiaeraAd~I~~~ 578 (583)
T 3qvp_A 499 DLSAWTEYIPYHFRPNYHGVGTCSMMPKEMGGVVDNAARVYGVQGLRVIDGSIPPTQMSSHVMTVFYAMALKISDAILED 578 (583)
T ss_dssp CHHHHHHHGGGSCEECSCCBCTTCBSCGGGTCSBCTTCBBTTCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhccCCCcCCCCceeCCCCCCCceECCCCeEecCCCeEEeecccCCCCCCcCcHHHHHHHHHHHHHHHHHh
Confidence 445677887654333 33222211 1122 44444 4999999999998853 2 224445667778877654
No 157
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=43.63 E-value=17 Score=28.34 Aligned_cols=33 Identities=15% Similarity=0.081 Sum_probs=27.7
Q ss_pred CCcEEEcCCCCCC-----CCChhHHHHHHHHHHHHHhc
Q 033665 69 IPQLYCCGDSTFP-----GIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 69 v~nLyl~G~~~~P-----G~Gv~ga~~sg~~~a~~i~~ 101 (114)
-.|+.++||.+|. |.|+..++.+|...++.+..
T Consensus 360 ~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~~ 397 (550)
T 2e4g_A 360 VGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFPD 397 (550)
T ss_dssp ETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCCC
T ss_pred cCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhccc
Confidence 4799999998753 67999999999999988764
No 158
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=42.94 E-value=19 Score=26.28 Aligned_cols=35 Identities=17% Similarity=0.250 Sum_probs=22.7
Q ss_pred CCCCcEEEcCCCCC--CCC-ChhHHHHHHHHHHHHHhc
Q 033665 67 TPIPQLYCCGDSTF--PGI-GVPAVAASGAIVANSLVS 101 (114)
Q Consensus 67 t~v~nLyl~G~~~~--PG~-Gv~ga~~sg~~~a~~i~~ 101 (114)
+..+|+|.+||.+. |-+ -...|..-|+.+|+.|+.
T Consensus 284 t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~~ 321 (401)
T 3vrd_B 284 SLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVVA 321 (401)
T ss_dssp SSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHHH
Confidence 56899999999864 111 122445567777777653
No 159
>1p3q_Q VPS9P, vacuolar protein sorting-associated protein VPS9; trafficking, post translational modification, mono- ubiquitination; 1.70A {Saccharomyces cerevisiae} SCOP: a.5.2.4 PDB: 1mn3_A
Probab=42.65 E-value=14 Score=20.39 Aligned_cols=25 Identities=4% Similarity=0.020 Sum_probs=18.1
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCce
Q 033665 3 ILSVLKYCVIWRAVERALGPGFCRDKC 29 (114)
Q Consensus 3 ~~K~~~~~~il~~l~~~~gP~i~~~~I 29 (114)
+.+.+-.+..++.|..+| |++ ...|
T Consensus 6 ~i~~~e~~~~~~~L~~MF-P~l-D~ev 30 (54)
T 1p3q_Q 6 KIEENERKDTLNTLQNMF-PDM-DPSL 30 (54)
T ss_dssp HHHHHHHHHHHHHHHHHS-TTS-CHHH
T ss_pred HHHHHHHHHHHHHHHHHc-ccC-CHHH
Confidence 344555677889999999 999 5433
No 160
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=42.60 E-value=19 Score=28.74 Aligned_cols=36 Identities=8% Similarity=0.014 Sum_probs=24.6
Q ss_pred CCCcEEEcCCCCCCCCC-h---hHHHHHHHHHHHHHhccc
Q 033665 68 PIPQLYCCGDSTFPGIG-V---PAVAASGAIVANSLVSVS 103 (114)
Q Consensus 68 ~v~nLyl~G~~~~PG~G-v---~ga~~sg~~~a~~i~~~~ 103 (114)
.++|||.++.+++|..+ . ..++.=|..+|+.|.++.
T Consensus 574 ~~~~l~v~d~s~~p~~~~~np~~t~~a~a~r~a~~i~~~~ 613 (623)
T 3pl8_A 574 GFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQNF 613 (623)
T ss_dssp TCSSEEECSGGGCCSCCCSCCHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCeEEecCCccCCCCCcChHHHHHHHHHHHHHHHHHHh
Confidence 48999999999998642 2 233445666777766543
No 161
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=42.30 E-value=45 Score=18.69 Aligned_cols=40 Identities=13% Similarity=-0.119 Sum_probs=25.9
Q ss_pred hhHHHHHHHHHHHHHHHHhCCCCCCCceeEEEeCCHHHHHH
Q 033665 2 KILSVLKYCVIWRAVERALGPGFCRDKCDVKFVGTPLTHQR 42 (114)
Q Consensus 2 ~~~K~~~~~~il~~l~~~~gP~i~~~~I~~~~~~TP~t~~~ 42 (114)
.+.|+++.+.+.+.+.+.+|..- .+..+...-..|.+|..
T Consensus 14 ~eqk~~L~~~l~~~l~~~lgip~-~~v~V~i~e~~~~~w~~ 53 (76)
T 1gyx_A 14 EQQKAALAADITDVIIRHLNSKD-SSISIALQQIQPESWQA 53 (76)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCG-GGCEEEEEECCGGGHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCcCC-ceEEEEEEEeChHHEEE
Confidence 46789999999999999875322 23333444455556643
No 162
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=42.20 E-value=18 Score=28.18 Aligned_cols=39 Identities=23% Similarity=0.228 Sum_probs=23.2
Q ss_pred CCCCC-CCCcEEEcCCCCCCCC--Chh--HHHHHHHHHHHHHhc
Q 033665 63 PGHST-PIPQLYCCGDSTFPGI--GVP--AVAASGAIVANSLVS 101 (114)
Q Consensus 63 p~~~t-~v~nLyl~G~~~~PG~--Gv~--ga~~sg~~~a~~i~~ 101 (114)
+..|. .++|||.+.+|++|-. |=| .+++=|..+|..|++
T Consensus 472 ~~lrV~Gv~nLrVvDaSv~P~~~~~np~~t~~aiAer~A~~ii~ 515 (536)
T 1ju2_A 472 GDFRVTGINALRVVDGSTFPYTPASHPQGFYLMLGRYVGIKILQ 515 (536)
T ss_dssp TTSBBTTCBTEEECSGGGCSSCSSSSCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEcCCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHH
Confidence 44454 4999999999998853 222 233344444444544
No 163
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=42.17 E-value=26 Score=25.99 Aligned_cols=33 Identities=12% Similarity=0.286 Sum_probs=27.3
Q ss_pred CcEEEcCCCCCCCCChhHHHHHHHHHHHHHhcccc
Q 033665 70 PQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVSQ 104 (114)
Q Consensus 70 ~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~~~ 104 (114)
+|||++.... |.|+..+...|+.+|+.|++.+.
T Consensus 388 ~~l~~a~G~~--g~G~~~ap~~g~~la~~i~~~~~ 420 (448)
T 3axb_A 388 SGIVVAAGTS--GSGIMKSDSIGRVAAAVALGMES 420 (448)
T ss_dssp CSEEEEECCT--TCCGGGHHHHHHHHHHHHTTCSE
T ss_pred CCEEEEECCC--chhHhHhHHHHHHHHHHHcCCCc
Confidence 8999885543 67999999999999999988653
No 164
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=41.36 E-value=22 Score=26.60 Aligned_cols=38 Identities=3% Similarity=0.003 Sum_probs=24.6
Q ss_pred CCCC-CCCcEEEcCCCCCCCC------------ChhHHHHHHHHHHHHHhc
Q 033665 64 GHST-PIPQLYCCGDSTFPGI------------GVPAVAASGAIVANSLVS 101 (114)
Q Consensus 64 ~~~t-~v~nLyl~G~~~~PG~------------Gv~ga~~sg~~~a~~i~~ 101 (114)
..++ ..+|+|.+||.+.... -...|...|+.+|+.|..
T Consensus 291 ~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~ 341 (437)
T 3sx6_A 291 HQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKA 341 (437)
T ss_dssp TSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred hccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 3455 5999999999974211 122455677777777653
No 165
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=40.77 E-value=32 Score=25.69 Aligned_cols=36 Identities=22% Similarity=0.224 Sum_probs=28.9
Q ss_pred CCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhccc
Q 033665 67 TPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 67 t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
+..++||++|+... ...++.+..-|+.+|+.+.+..
T Consensus 326 ~~~p~l~~~G~~~~-~~~~~~a~~qa~~~a~~~~g~~ 361 (447)
T 2gv8_A 326 IPDPTLAFVGLALH-VVPFPTSQAQAAFLARVWSGRL 361 (447)
T ss_dssp TTCTTEEESSCCBS-SCHHHHHHHHHHHHHHHHTTSS
T ss_pred CCCCcEEEEecccc-ccCchHHHHHHHHHHHHHcCCC
Confidence 46899999999875 3467777888999999988754
No 166
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=40.64 E-value=24 Score=27.34 Aligned_cols=40 Identities=10% Similarity=0.251 Sum_probs=26.4
Q ss_pred CCCCC-CCCcEEEcCCCCCCCC--C--hhHHHHHHHHHHHHHhcc
Q 033665 63 PGHST-PIPQLYCCGDSTFPGI--G--VPAVAASGAIVANSLVSV 102 (114)
Q Consensus 63 p~~~t-~v~nLyl~G~~~~PG~--G--v~ga~~sg~~~a~~i~~~ 102 (114)
+..|. .++|||.+.+|++|-. + ...+++=|..+|+.|+++
T Consensus 498 ~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~ 542 (546)
T 1kdg_A 498 SNVKVFGTNNLFIVDAGIIPHLPTGNPQGTLMSAAEQAAAKILAL 542 (546)
T ss_dssp TTCBBTTCSSEEECSGGGCSSCCSSCSHHHHHHHHHHHHHHHHHS
T ss_pred CCCeEccCCCcEEeEecccCCCCCccHHHHHHHHHHHHHHHHHhh
Confidence 44443 4999999999999853 2 224445566677777654
No 167
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=40.42 E-value=14 Score=28.12 Aligned_cols=33 Identities=12% Similarity=0.079 Sum_probs=28.1
Q ss_pred CCcEEEcCCCCC-----CCCChhHHHHHHHHHHHHHhc
Q 033665 69 IPQLYCCGDSTF-----PGIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 69 v~nLyl~G~~~~-----PG~Gv~ga~~sg~~~a~~i~~ 101 (114)
-.|+.++||.+| -|.|+..++.+|...|+.+..
T Consensus 337 ~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~ 374 (511)
T 2weu_A 337 INNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPG 374 (511)
T ss_dssp ETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCC
T ss_pred CCCEEEEechhhccCccccccHHHHHHHHHHHHHHhcc
Confidence 489999999875 278999999999999988864
No 168
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=40.36 E-value=43 Score=17.94 Aligned_cols=20 Identities=5% Similarity=-0.278 Sum_probs=17.2
Q ss_pred hhHHHHHHHHHHHHHHHHhC
Q 033665 2 KILSVLKYCVIWRAVERALG 21 (114)
Q Consensus 2 ~~~K~~~~~~il~~l~~~~g 21 (114)
.+.|+++.+.+-+.+.+.+|
T Consensus 12 ~eqK~~L~~~it~~~~~~lg 31 (62)
T 3m20_A 12 VGKKREFVERLTSVAAEIYG 31 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 46799999999999999874
No 169
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=39.70 E-value=18 Score=29.49 Aligned_cols=38 Identities=18% Similarity=0.151 Sum_probs=26.4
Q ss_pred CCCC-CCcEEEcCCCCCCCCChhHH----HHHHHHHHHHHhccc
Q 033665 65 HSTP-IPQLYCCGDSTFPGIGVPAV----AASGAIVANSLVSVS 103 (114)
Q Consensus 65 ~~t~-v~nLyl~G~~~~PG~Gv~ga----~~sg~~~a~~i~~~~ 103 (114)
..+. ++|||+|||-.-+ .|..=| +++|.+||..+.+++
T Consensus 384 Le~k~~~gLf~AGqinGt-~GyeEAaaqGl~AG~nAa~~~~~~~ 426 (637)
T 2zxi_A 384 LETKKIRGLFHAGNFNGT-TGYEEAAGQGIVAGINAALRAFGKE 426 (637)
T ss_dssp SBBSSSBTEEECGGGGTB-CSHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ccccCCCCEEEeeecCCc-chHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3444 9999999998742 455433 357778888887765
No 170
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=39.24 E-value=15 Score=28.34 Aligned_cols=33 Identities=12% Similarity=0.045 Sum_probs=27.5
Q ss_pred CCcEEEcCCCCCC-----CCChhHHHHHHHHHHHHHhc
Q 033665 69 IPQLYCCGDSTFP-----GIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 69 v~nLyl~G~~~~P-----G~Gv~ga~~sg~~~a~~i~~ 101 (114)
-.|+.++||.+|. |.|+..++.+|...++.+..
T Consensus 329 ~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~~ 366 (538)
T 2aqj_A 329 VNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFPD 366 (538)
T ss_dssp ETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCCB
T ss_pred cCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhhc
Confidence 5889999998754 78999999999998887753
No 171
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=38.69 E-value=9.5 Score=26.94 Aligned_cols=36 Identities=17% Similarity=0.158 Sum_probs=28.2
Q ss_pred CCCcEEEcCCCCC-------CCCChhHHHHHHHHHHHHHhccc
Q 033665 68 PIPQLYCCGDSTF-------PGIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 68 ~v~nLyl~G~~~~-------PG~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
-+|++|.+|+.+. .|+-+.+++.||..+|..+.++-
T Consensus 232 ~~p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~~l 274 (284)
T 1rp0_A 232 VVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKAL 274 (284)
T ss_dssp EETTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHT
T ss_pred ccCCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHHHh
Confidence 3689999997651 25667888999999999987743
No 172
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=37.92 E-value=28 Score=26.06 Aligned_cols=35 Identities=26% Similarity=0.441 Sum_probs=22.6
Q ss_pred CCCCcEEEcCCCCC-CC-------CChh----HHHHHHHHHHHHHhc
Q 033665 67 TPIPQLYCCGDSTF-PG-------IGVP----AVAASGAIVANSLVS 101 (114)
Q Consensus 67 t~v~nLyl~G~~~~-PG-------~Gv~----ga~~sg~~~a~~i~~ 101 (114)
|..+|+|.+||.+. |. .++| .|..-|+.+|+.|..
T Consensus 284 t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~ 330 (430)
T 3hyw_A 284 PTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVN 330 (430)
T ss_dssp SSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHH
Confidence 56899999999963 21 1233 344567777766653
No 173
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=37.06 E-value=17 Score=26.48 Aligned_cols=33 Identities=18% Similarity=0.255 Sum_probs=27.8
Q ss_pred CCcEEEcCCCCCC-----CCChhHHHHHHHHHHHHHhc
Q 033665 69 IPQLYCCGDSTFP-----GIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 69 v~nLyl~G~~~~P-----G~Gv~ga~~sg~~~a~~i~~ 101 (114)
-.++.++||.+|. |.|+..++.+|..+++.+..
T Consensus 285 ~~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~ 322 (399)
T 2x3n_A 285 ADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDL 322 (399)
T ss_dssp ETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred cCcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHh
Confidence 3789999999753 67899999999999998865
No 174
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=35.85 E-value=33 Score=27.18 Aligned_cols=40 Identities=15% Similarity=0.107 Sum_probs=26.3
Q ss_pred CCCCC-CCCcEEEcCCCCCCCC--Chh--HHHHHHHHHHHHHhcc
Q 033665 63 PGHST-PIPQLYCCGDSTFPGI--GVP--AVAASGAIVANSLVSV 102 (114)
Q Consensus 63 p~~~t-~v~nLyl~G~~~~PG~--Gv~--ga~~sg~~~a~~i~~~ 102 (114)
+..|. .++||+.+.+|++|-. |=+ .+++=|..+|+.|+++
T Consensus 521 ~~lrV~Gv~~LrVvDaSv~P~~~~~n~~~~~~~iaekaAd~I~~~ 565 (566)
T 3fim_B 521 PDLKVKGVDGLRIVDGSILPFAPNAHTQGPIYLVGKQGADLIKAD 565 (566)
T ss_dssp TTCBBTTCBSEEECSGGGCCSCCSSCTHHHHHHHHHHHHHHHHHT
T ss_pred CCCeEccCCCcEEcccccCCCCCCcCcHHHHHHHHHHHHHHHhhc
Confidence 44443 4999999999998853 222 3445566677777654
No 175
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=35.62 E-value=33 Score=20.71 Aligned_cols=33 Identities=12% Similarity=0.108 Sum_probs=24.0
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCceeEEEeCCH
Q 033665 3 ILSVLKYCVIWRAVERALGPGFCRDKCDVKFVGTP 37 (114)
Q Consensus 3 ~~K~~~~~~il~~l~~~~gP~i~~~~I~~~~~~TP 37 (114)
+.|+++.+.+.+.+++.+ ++..+++.....-.|
T Consensus 71 eqk~~l~~~i~~~l~~~l--gi~~~~v~I~~~e~~ 103 (112)
T 3b64_A 71 SEPEKVTSIVTAAITKEC--GIVADRIFVLYFSPL 103 (112)
T ss_dssp THHHHHHHHHHHHHHHHH--CCCGGGEEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHh--CcCcceEEEEEEEhh
Confidence 578999999999999987 443556655555444
No 176
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=35.37 E-value=22 Score=25.73 Aligned_cols=33 Identities=18% Similarity=0.232 Sum_probs=27.1
Q ss_pred CCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhccc
Q 033665 69 IPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 69 v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
.+|||++.... |.|+..+...|+.+|+.+.+..
T Consensus 344 ~~~l~~~~G~~--g~G~~~a~~~g~~la~~i~g~~ 376 (405)
T 2gag_B 344 IQNLYVNCGWG--TGGFKGTPGAGFTLAHTIANDE 376 (405)
T ss_dssp SBTEEEEECCG--GGCSTTHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEecCC--CchhhHHHHHHHHHHHHHhCCC
Confidence 68999886543 6799989999999999998754
No 177
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=35.20 E-value=26 Score=25.15 Aligned_cols=31 Identities=13% Similarity=-0.040 Sum_probs=25.3
Q ss_pred CcEEEcCCCCCCCCChhHHHHHHHHHHHHHhcc
Q 033665 70 PQLYCCGDSTFPGIGVPAVAASGAIVANSLVSV 102 (114)
Q Consensus 70 ~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~ 102 (114)
+|+|++... -|.|+..+...|+.+|+.+++.
T Consensus 327 ~~~~~a~G~--~g~G~~~a~~~g~~~a~li~~~ 357 (363)
T 1c0p_A 327 VTLVHAYGF--SSAGYQQSWGAAEDVAQLVDEA 357 (363)
T ss_dssp EEEEEEECC--TTCHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecCC--CCcchheeccHHHHHHHHHHHH
Confidence 799987543 3789999999999999998764
No 178
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=35.02 E-value=40 Score=18.30 Aligned_cols=20 Identities=5% Similarity=-0.170 Sum_probs=17.2
Q ss_pred hhHHHHHHHHHHHHHHHHhC
Q 033665 2 KILSVLKYCVIWRAVERALG 21 (114)
Q Consensus 2 ~~~K~~~~~~il~~l~~~~g 21 (114)
.+.|+++.+.+-+.+.+.+|
T Consensus 16 ~eqK~~l~~~lt~~l~~~lg 35 (67)
T 3m21_A 16 NEQKQQLIEGVSDLMVKVLN 35 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHC
Confidence 36799999999999998874
No 179
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=34.91 E-value=14 Score=26.58 Aligned_cols=33 Identities=18% Similarity=0.283 Sum_probs=26.3
Q ss_pred CCcEEEcCCCCCC-----CCChhHHHHHHHHHHHHHhc
Q 033665 69 IPQLYCCGDSTFP-----GIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 69 v~nLyl~G~~~~P-----G~Gv~ga~~sg~~~a~~i~~ 101 (114)
-.++.|+||.+|+ |.|+..++..|.+.+..+..
T Consensus 310 ~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~ 347 (412)
T 4hb9_A 310 SSTVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLAS 347 (412)
T ss_dssp CCSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHH
T ss_pred ccCEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 4689999998753 67888888888888887754
No 180
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=33.39 E-value=51 Score=17.71 Aligned_cols=20 Identities=15% Similarity=-0.051 Sum_probs=17.3
Q ss_pred hhHHHHHHHHHHHHHHHHhC
Q 033665 2 KILSVLKYCVIWRAVERALG 21 (114)
Q Consensus 2 ~~~K~~~~~~il~~l~~~~g 21 (114)
.+.|+++.+.+.+.+.+.+|
T Consensus 13 ~eqk~~L~~~it~~~~~~lg 32 (65)
T 3ry0_A 13 PQEVAALGEALTAAAHETLG 32 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 46799999999999999874
No 181
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=33.38 E-value=26 Score=27.83 Aligned_cols=33 Identities=21% Similarity=0.372 Sum_probs=27.7
Q ss_pred CCcEEEcCCCCCC-----CCChhHHHHHHHHHHHHHhc
Q 033665 69 IPQLYCCGDSTFP-----GIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 69 v~nLyl~G~~~~P-----G~Gv~ga~~sg~~~a~~i~~ 101 (114)
-+|+.++||.+|. |.|+..++.+|..+|+.+..
T Consensus 307 ~~rvvLIGDAAh~~~Pl~GqGinlAl~dA~~LA~~L~~ 344 (591)
T 3i3l_A 307 ADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAAAIDR 344 (591)
T ss_dssp ETTEEECGGGTCBCCGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEccccccCCCcccccHHHHHHHHHHHHHHHHH
Confidence 5789999999764 77999999999999888764
No 182
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=33.25 E-value=25 Score=28.10 Aligned_cols=35 Identities=11% Similarity=0.152 Sum_probs=29.5
Q ss_pred CCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhcccch
Q 033665 69 IPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVSQH 105 (114)
Q Consensus 69 v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~~~~ 105 (114)
.+|||++.... |.|+..+.++|+.+|+.|+++...
T Consensus 614 ~~~l~~a~G~g--~~Gl~~Ap~~ae~lA~~i~g~~~p 648 (676)
T 3ps9_A 614 FDDLFMFAALG--SRGLCSAPLCAEILAAQMSDEPIP 648 (676)
T ss_dssp EEEEEEEECCT--TCHHHHHHHHHHHHHHHHTTCCCS
T ss_pred CCCEeeeeccc--ccHHHHHHHHHHHHHHHHcCCCCC
Confidence 68999986654 679999999999999999987643
No 183
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=32.50 E-value=39 Score=25.67 Aligned_cols=20 Identities=15% Similarity=0.343 Sum_probs=15.7
Q ss_pred CCCCC-CCCcEEEcCCCCCCC
Q 033665 63 PGHST-PIPQLYCCGDSTFPG 82 (114)
Q Consensus 63 p~~~t-~v~nLyl~G~~~~PG 82 (114)
+..+. .++|||.|.+|++|-
T Consensus 479 ~~~rV~Gv~nL~VvDaSv~P~ 499 (526)
T 3t37_A 479 ANLRLKALDNLFVVDASIMPN 499 (526)
T ss_dssp TTCBBTTCSSEEECSGGGCSS
T ss_pred CCCEEcCCCCeEEEEcCcccC
Confidence 44444 499999999999984
No 184
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=32.20 E-value=22 Score=27.79 Aligned_cols=35 Identities=20% Similarity=0.152 Sum_probs=24.0
Q ss_pred CCCcEEEcCCCCCCCCChhHHH----HHHHHHHHHHhccc
Q 033665 68 PIPQLYCCGDSTFPGIGVPAVA----ASGAIVANSLVSVS 103 (114)
Q Consensus 68 ~v~nLyl~G~~~~PG~Gv~ga~----~sg~~~a~~i~~~~ 103 (114)
.++|||++||-+-- .|..-+. ++|.+++..+.+++
T Consensus 327 ~~~~Lf~AGqi~G~-~Gy~eAaa~Gl~AG~naa~~~~g~~ 365 (443)
T 3g5s_A 327 EAEGLYAAGVLAGV-EGYLESAATGFLAGLNAARKALGLP 365 (443)
T ss_dssp TEEEEEECGGGGTB-CSHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCEEECcccccc-HHHHHHHHhHHHHHHHHHHHhcCCC
Confidence 39999999998742 4554333 46667777777664
No 185
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=32.07 E-value=23 Score=25.66 Aligned_cols=33 Identities=21% Similarity=0.365 Sum_probs=27.2
Q ss_pred CCcEEEcCCCCC---C--CCChhHHHHHHHHHHHHHhc
Q 033665 69 IPQLYCCGDSTF---P--GIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 69 v~nLyl~G~~~~---P--G~Gv~ga~~sg~~~a~~i~~ 101 (114)
-.++.++||.+| | |.|+..++..|...+..+..
T Consensus 278 ~grv~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~ 315 (394)
T 1k0i_A 278 HGRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLK 315 (394)
T ss_dssp ETTEEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEechhhcCCCcccchHHHHHHHHHHHHHHHHH
Confidence 368999999975 3 78999999999999888753
No 186
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=31.72 E-value=57 Score=16.82 Aligned_cols=20 Identities=20% Similarity=0.031 Sum_probs=17.0
Q ss_pred hhHHHHHHHHHHHHHHHHhC
Q 033665 2 KILSVLKYCVIWRAVERALG 21 (114)
Q Consensus 2 ~~~K~~~~~~il~~l~~~~g 21 (114)
.+.|+++.+.+.+.+.+.+|
T Consensus 16 ~e~k~~l~~~l~~~l~~~lg 35 (63)
T 2x4k_A 16 DEQLKNLVSEVTDAVEKTTG 35 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 35689999999999999874
No 187
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=31.69 E-value=27 Score=28.01 Aligned_cols=35 Identities=17% Similarity=0.283 Sum_probs=29.4
Q ss_pred CCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhcccch
Q 033665 69 IPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVSQH 105 (114)
Q Consensus 69 v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~~~~ 105 (114)
.+|||++.... |.|+..+.++|+..|+.|+++...
T Consensus 618 ~~~l~~a~G~g--~~Gl~~ap~~ae~lA~~i~g~~~p 652 (689)
T 3pvc_A 618 WPELFMVGGLG--SRGLCSAPLVAEILAAQMFGEPLP 652 (689)
T ss_dssp EEEEEEEECCT--TCHHHHHHHHHHHHHHHHTTCCCS
T ss_pred CCChHHhhccc--ccHHHHHHHHHHHHHHHHcCCCCC
Confidence 68999986654 679999999999999999987643
No 188
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=31.30 E-value=30 Score=24.65 Aligned_cols=79 Identities=11% Similarity=-0.013 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCceeEEEeCCHHHHHHHhCCCCCCCCCCCCCCCc--CCCCCCCCCCcEEEcCCCCCCCCC
Q 033665 7 LKYCVIWRAVERALGPGFCRDKCDVKFVGTPLTHQRFLRRNRGTYGPAIQAGKE--TFPGHSTPIPQLYCCGDSTFPGIG 84 (114)
Q Consensus 7 ~~~~~il~~l~~~~gP~i~~~~I~~~~~~TP~t~~~~~~~~~G~~G~~~~~~q~--~~p~~~t~v~nLyl~G~~~~PG~G 84 (114)
+..+.+++.+.+++ |++....|+..... .+...+. ... .+.+.....+|||++.... |.|
T Consensus 254 ~~~~~l~~~~~~~~-P~l~~~~i~~~w~G--------------~r~~t~D-~p~~~~~ig~~~~~~~~~~~~G~~--g~G 315 (351)
T 3g3e_A 254 QDHNTIWEGCCRLE-PTLKNARIIGERTG--------------FRPVRPQ-IRLEREQLRTGPSNTEVIHNYGHG--GYG 315 (351)
T ss_dssp HHHHHHHHHHHHHC-GGGGGCEEEEEEEE--------------EEEECSS-CEEEEEEECCSSSCEEEEEEECCT--TCH
T ss_pred HHHHHHHHHHHHhC-CCccCCcEeeeeEe--------------eCCCCCC-ccceeeeccCCCCCCeEEEEeCCC--cch
Confidence 45678888999998 98822334332221 1111111 000 0001111268999875443 679
Q ss_pred hhHHHHHHHHHHHHHhccc
Q 033665 85 VPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 85 v~ga~~sg~~~a~~i~~~~ 103 (114)
+..+...|+.+|+.|.+..
T Consensus 316 ~~~ap~~g~~la~li~~~~ 334 (351)
T 3g3e_A 316 LTIHWGCALEAAKLFGRIL 334 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHHHH
Confidence 9999899999999887643
No 189
>3fwt_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.90A {Leishmania major}
Probab=30.68 E-value=39 Score=21.43 Aligned_cols=30 Identities=13% Similarity=0.059 Sum_probs=21.6
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCceeEEEe
Q 033665 3 ILSVLKYCVIWRAVERALGPGFCRDKCDVKFV 34 (114)
Q Consensus 3 ~~K~~~~~~il~~l~~~~gP~i~~~~I~~~~~ 34 (114)
+.|+++.+.|.+.+++.+ ++..++|-....
T Consensus 92 e~n~~~s~~i~~~l~~~L--gI~~~rvyI~f~ 121 (133)
T 3fwt_A 92 SKPKMMTPRIAAAITKEC--GIPAERIYVFYY 121 (133)
T ss_dssp HHHHHHHHHHHHHHHHHH--CCCGGGEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHh--CcChhhEEEEEE
Confidence 578999999999999987 443455444433
No 190
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=30.55 E-value=25 Score=25.75 Aligned_cols=31 Identities=23% Similarity=0.397 Sum_probs=27.0
Q ss_pred cEEEcCCCCC-----CCCChhHHHHHHHHHHHHHhc
Q 033665 71 QLYCCGDSTF-----PGIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 71 nLyl~G~~~~-----PG~Gv~ga~~sg~~~a~~i~~ 101 (114)
++.++||.+| -|.|+..++..|...|+.+..
T Consensus 315 rv~LiGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~ 350 (398)
T 2xdo_A 315 PITMIGDAAHLMPPFAGQGVNSGLVDALILSDNLAD 350 (398)
T ss_dssp CEEECTHHHHCCCCTTSCSHHHHHHHHHHHHHHHHS
T ss_pred cEEEEeehhccCCCccCccHHHHHHHHHHHHHHHHh
Confidence 7999999973 378999999999999999875
No 191
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=30.19 E-value=36 Score=26.13 Aligned_cols=32 Identities=25% Similarity=0.323 Sum_probs=26.1
Q ss_pred CcEEEcCCCCCC-----CCChhHHHHHHHHHHHHHhc
Q 033665 70 PQLYCCGDSTFP-----GIGVPAVAASGAIVANSLVS 101 (114)
Q Consensus 70 ~nLyl~G~~~~P-----G~Gv~ga~~sg~~~a~~i~~ 101 (114)
.+++++||.+|. |.|+..++..+.+.+..+..
T Consensus 301 grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La~~La~ 337 (535)
T 3ihg_A 301 GRVFLAGDAAKVTPPTGGMSGNAAVADGFDLAWKLAA 337 (535)
T ss_dssp TTEEECTTTTEECCSTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEecccccCCCccCCccccccccHHHHHHHHHH
Confidence 789999999742 67888888888888887754
No 192
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=29.36 E-value=67 Score=24.13 Aligned_cols=36 Identities=3% Similarity=-0.065 Sum_probs=30.2
Q ss_pred CCCCcEEEcCCCCCCCCChhHHHHHHHHHHHHHhccc
Q 033665 67 TPIPQLYCCGDSTFPGIGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 67 t~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
..-+|+|+||+.-. ...+-+++.+++.++++|++.+
T Consensus 406 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ 441 (453)
T 2bcg_G 406 GSKDNIYLSRSYDA-SSHFESMTDDVKDIYFRVTGHP 441 (453)
T ss_dssp STTTSEEECCCCCS-CSBSHHHHHHHHHHHHHHHSSC
T ss_pred CCCCCEEECCCCCc-cccHHHHHHHHHHHHHHHHCCc
Confidence 34699999998755 6778999999999999999765
No 193
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=28.29 E-value=34 Score=25.50 Aligned_cols=38 Identities=26% Similarity=0.232 Sum_probs=26.3
Q ss_pred CCcEEEcCCCC-------CCCCChhHHHHHHHHHHHHHhcccchH
Q 033665 69 IPQLYCCGDST-------FPGIGVPAVAASGAIVANSLVSVSQHS 106 (114)
Q Consensus 69 v~nLyl~G~~~-------~PG~Gv~ga~~sg~~~a~~i~~~~~~~ 106 (114)
+||||.+|=.+ .-|+=+-+-++||+.+|+.++++-+..
T Consensus 293 ~~gl~~~gm~~~~~~g~~rmgp~fg~m~~sg~~~a~~~~~~~~~~ 337 (344)
T 3jsk_A 293 VPGLIVGGMELSEIDGANRMGPTFGAMALSGVKAAHEAIRVFDLR 337 (344)
T ss_dssp ETTEEECGGGHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEechhhHhhcCCCCCCcccceeeecCHHHHHHHHHHHHhh
Confidence 89999998653 223323344579999999998875443
No 194
>3ej9_A Alpha-subunit of trans-3-chloroacrylic acid dehal; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej3_A 1s0y_A 3ej7_A
Probab=27.65 E-value=64 Score=18.14 Aligned_cols=20 Identities=15% Similarity=0.079 Sum_probs=17.2
Q ss_pred hhHHHHHHHHHHHHHHHHhC
Q 033665 2 KILSVLKYCVIWRAVERALG 21 (114)
Q Consensus 2 ~~~K~~~~~~il~~l~~~~g 21 (114)
.+.|+++.+.+.+.+.+.+|
T Consensus 14 ~eqK~~L~~~it~~l~~~lg 33 (76)
T 3ej9_A 14 DEQKRALSAGLLRVISEATG 33 (76)
T ss_dssp HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHC
Confidence 46799999999999999874
No 195
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=27.15 E-value=59 Score=17.90 Aligned_cols=20 Identities=10% Similarity=-0.129 Sum_probs=17.1
Q ss_pred hhHHHHHHHHHHHHHHHHhC
Q 033665 2 KILSVLKYCVIWRAVERALG 21 (114)
Q Consensus 2 ~~~K~~~~~~il~~l~~~~g 21 (114)
.+.|+++.+.+-+.+.+.+|
T Consensus 14 ~eqK~~L~~~it~~l~~~lg 33 (72)
T 3mb2_A 14 TEQKAELARALSAAAAAAFD 33 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 46789999999999999873
No 196
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=26.26 E-value=80 Score=18.91 Aligned_cols=33 Identities=3% Similarity=0.025 Sum_probs=22.7
Q ss_pred hhHHHHHHHHHHHHHHHHhCCCCCCCceeEEEeCC
Q 033665 2 KILSVLKYCVIWRAVERALGPGFCRDKCDVKFVGT 36 (114)
Q Consensus 2 ~~~K~~~~~~il~~l~~~~gP~i~~~~I~~~~~~T 36 (114)
.+.|+++.+.+-+.+++.+ ++..+++.....-.
T Consensus 70 ~eqk~~l~~~i~~~l~~~l--gi~~~~v~I~~~e~ 102 (115)
T 1uiz_A 70 GPQNKSYTKLLCDILTKQL--NIPANRVYINYYDL 102 (115)
T ss_dssp HHHHHHHHHHHHHHHHHHH--CCCGGGEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHh--CcCcceEEEEEEEC
Confidence 3578999999999999987 33245554444333
No 197
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=25.92 E-value=77 Score=19.00 Aligned_cols=33 Identities=15% Similarity=0.144 Sum_probs=23.0
Q ss_pred hhHHHHHHHHHHHHHHHHhCCCCCCCceeEEEeCC
Q 033665 2 KILSVLKYCVIWRAVERALGPGFCRDKCDVKFVGT 36 (114)
Q Consensus 2 ~~~K~~~~~~il~~l~~~~gP~i~~~~I~~~~~~T 36 (114)
.+.|+++.+.+-+.+++.+ ++..+++.....-.
T Consensus 70 ~eqk~~l~~~i~~~l~~~l--gi~~~~v~I~~~e~ 102 (115)
T 2xcz_A 70 GSRTQEVSELVCGHIEQNL--GIPADRIYIGFEDV 102 (115)
T ss_dssp TTHHHHHHHHHHHHHHHHH--CCCGGGEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHh--CcCcccEEEEEEEC
Confidence 3578999999999999987 34245555444433
No 198
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=25.89 E-value=63 Score=25.66 Aligned_cols=32 Identities=19% Similarity=0.383 Sum_probs=25.9
Q ss_pred CCcEEEcCCCCCC-----CCChhHHHHHHHHHHHHHh
Q 033665 69 IPQLYCCGDSTFP-----GIGVPAVAASGAIVANSLV 100 (114)
Q Consensus 69 v~nLyl~G~~~~P-----G~Gv~ga~~sg~~~a~~i~ 100 (114)
-.+++++||.+|. |.|+..++..|.+.+.++-
T Consensus 341 ~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa 377 (639)
T 2dkh_A 341 LPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLA 377 (639)
T ss_dssp CCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHH
T ss_pred cCcEEEEecccccCCCcccccchhhHHHHHHHHHHHH
Confidence 5789999999853 7799999999988876654
No 199
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=25.84 E-value=83 Score=18.73 Aligned_cols=31 Identities=13% Similarity=0.235 Sum_probs=21.8
Q ss_pred hhHHHHHHHHHHHHHHHHhCCCCCCCceeEEEe
Q 033665 2 KILSVLKYCVIWRAVERALGPGFCRDKCDVKFV 34 (114)
Q Consensus 2 ~~~K~~~~~~il~~l~~~~gP~i~~~~I~~~~~ 34 (114)
.+.|+++.+.+-+.+++.+| +..+++.....
T Consensus 69 ~eqk~~l~~~i~~~l~~~lg--i~~~~v~I~~~ 99 (113)
T 1hfo_A 69 PSRNRDHSAKLFDHLNTKLG--IPKNRMYIHFV 99 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHC--CCGGGEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhC--cCcCeEEEEEE
Confidence 35789999999999999873 32455544433
No 200
>2wkb_A Macrophage migration inhibitory factor; cytokine; HET: CME; 1.78A {Plasmodium berghei} PDB: 3gad_A 3gac_A 2wkf_A*
Probab=25.54 E-value=94 Score=19.06 Aligned_cols=33 Identities=12% Similarity=0.038 Sum_probs=22.8
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCceeEEEeCCH
Q 033665 3 ILSVLKYCVIWRAVERALGPGFCRDKCDVKFVGTP 37 (114)
Q Consensus 3 ~~K~~~~~~il~~l~~~~gP~i~~~~I~~~~~~TP 37 (114)
+.|+++.+.+.+.+++.+ ++..++|.....-.|
T Consensus 71 eqk~~l~~~i~~~l~~~l--gi~~~~v~I~~~e~~ 103 (125)
T 2wkb_A 71 SNNSLLADKITKILSNHL--SVKPRRVYIEFRDCS 103 (125)
T ss_dssp CTHHHHHHHHHHHHHHHH--CCCGGGEEEEEEC--
T ss_pred HHHHHHHHHHHHHHHHHh--CcCcceEEEEEEECC
Confidence 568999999999999987 443556555554443
No 201
>1ghh_A DINI, DNA-damage-inducible protein I; bicelle, dipolar coupling, liquid crystal, PF1, RECA, protein binding; NMR {Escherichia coli} SCOP: d.57.1.1
Probab=24.82 E-value=1.1e+02 Score=17.97 Aligned_cols=30 Identities=13% Similarity=0.154 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCceeEEEeC
Q 033665 4 LSVLKYCVIWRAVERALGPGFCRDKCDVKFVG 35 (114)
Q Consensus 4 ~K~~~~~~il~~l~~~~gP~i~~~~I~~~~~~ 35 (114)
..+.+.+.+..+|.+.| |+. ..++.++..+
T Consensus 17 a~~aL~~EL~kRl~~~f-pd~-~~~V~Vr~~s 46 (81)
T 1ghh_A 17 AIDALAGELSRRIQYAF-PDN-EGHVSVRYAA 46 (81)
T ss_dssp HHHHHHHHHHHHHHHHC-SSS-CCEEEEEEES
T ss_pred HHHHHHHHHHHHHHhhC-CCC-CceEEEeecC
Confidence 35677888889999999 987 5466666544
No 202
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=24.45 E-value=66 Score=22.57 Aligned_cols=30 Identities=17% Similarity=0.023 Sum_probs=23.2
Q ss_pred CCCcEEEcCCCCCCCCChhHHHHHHHHHHHHH
Q 033665 68 PIPQLYCCGDSTFPGIGVPAVAASGAIVANSL 99 (114)
Q Consensus 68 ~v~nLyl~G~~~~PG~Gv~ga~~sg~~~a~~i 99 (114)
..+|||++.... +.|+..+...|+.+++.|
T Consensus 338 ~~~~l~~~~G~~--~~G~t~ap~~a~~~a~~i 367 (369)
T 3dme_A 338 GVAGLVNLYGIE--SPGLTASLAIAEETLARL 367 (369)
T ss_dssp CCTTEEEEECCC--TTHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCC--CchHhccHHHHHHHHHHh
Confidence 468999885543 578888888888888876
No 203
>2os5_A Acemif; macrophage migration inhibitory factor, cytokine, nematode,; 1.60A {Ancylostoma ceylanicum} PDB: 3rf4_A* 3rf5_A*
Probab=24.43 E-value=90 Score=18.88 Aligned_cols=33 Identities=12% Similarity=0.060 Sum_probs=22.7
Q ss_pred hhHHHHHHHHHHHHHHHHhCCCCCCCceeEEEeCC
Q 033665 2 KILSVLKYCVIWRAVERALGPGFCRDKCDVKFVGT 36 (114)
Q Consensus 2 ~~~K~~~~~~il~~l~~~~gP~i~~~~I~~~~~~T 36 (114)
.+.|+++.+.+-+.+++.+| +..+++.....-.
T Consensus 70 ~eqk~~l~~~i~~~l~~~lg--i~~~~v~I~~~e~ 102 (119)
T 2os5_A 70 ADDNIRHTQKITQFCQDTLK--LPKDKVIITYFDL 102 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHC--CCGGGEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHhC--cCcccEEEEEEEC
Confidence 36789999999999999873 3245554444333
No 204
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=24.22 E-value=56 Score=24.93 Aligned_cols=37 Identities=14% Similarity=0.293 Sum_probs=27.5
Q ss_pred CCCCCcEEEcCCCCCC-----C----CChhHHHHHHHHHHHHHhccc
Q 033665 66 STPIPQLYCCGDSTFP-----G----IGVPAVAASGAIVANSLVSVS 103 (114)
Q Consensus 66 ~t~v~nLyl~G~~~~P-----G----~Gv~ga~~sg~~~a~~i~~~~ 103 (114)
+| .+|+|.+||.+.. | .-++-|+..|+.+|..+++..
T Consensus 308 ~t-~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~g~~ 353 (493)
T 1m6i_A 308 QA-RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAA 353 (493)
T ss_dssp EE-ETTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHHHHHHTSCC
T ss_pred cc-CCCeeEeeeeEeccCcccCccccchHHHHHHHHHHHHHHhcCCC
Confidence 44 5899999999741 1 124468889999999998764
No 205
>2aal_A Malonate semialdehyde decarboxylase; tautomerase superfamily, beta-alpha-beta, homotrimeric, LYAS; 1.65A {Pseudomonas pavonaceae} SCOP: d.80.1.6 PDB: 2aag_A 2aaj_A
Probab=23.59 E-value=94 Score=19.16 Aligned_cols=32 Identities=28% Similarity=0.285 Sum_probs=22.1
Q ss_pred hhHHHHHHHHHHHHHHHHhCCCCCCCceeEEEeC
Q 033665 2 KILSVLKYCVIWRAVERALGPGFCRDKCDVKFVG 35 (114)
Q Consensus 2 ~~~K~~~~~~il~~l~~~~gP~i~~~~I~~~~~~ 35 (114)
.+.|+++.+.+.+.+.+.+| +..+++.....-
T Consensus 78 ~eqK~~l~~~l~~~l~~~lg--~~~~~v~I~i~e 109 (131)
T 2aal_A 78 EEQKVCFYKLLTGALERDCG--ISPDDVIVALVE 109 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHC--CCGGGEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhC--cCcccEEEEEEE
Confidence 46799999999999999873 324444444333
No 206
>4dh4_A MIF; trimer, isomerase; 1.82A {Toxoplasma gondii}
Probab=23.17 E-value=1.3e+02 Score=18.02 Aligned_cols=19 Identities=26% Similarity=0.202 Sum_probs=16.8
Q ss_pred hHHHHHHHHHHHHHHHHhC
Q 033665 3 ILSVLKYCVIWRAVERALG 21 (114)
Q Consensus 3 ~~K~~~~~~il~~l~~~~g 21 (114)
+.|+++.+.+.+.+++.+|
T Consensus 71 e~~~~l~~~i~~~l~~~Lg 89 (114)
T 4dh4_A 71 STNCKIAAALSAACERHLG 89 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 5789999999999999883
No 207
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=23.10 E-value=58 Score=25.81 Aligned_cols=41 Identities=24% Similarity=0.225 Sum_probs=28.4
Q ss_pred CCCCC-CCCcEEEcCCCCCCCC--Ch--hHHHHHHHHHHHHHhccc
Q 033665 63 PGHST-PIPQLYCCGDSTFPGI--GV--PAVAASGAIVANSLVSVS 103 (114)
Q Consensus 63 p~~~t-~v~nLyl~G~~~~PG~--Gv--~ga~~sg~~~a~~i~~~~ 103 (114)
+..+. .++||+.+.+|++|-. |= ..+++=|..+|+.|+++.
T Consensus 528 ~~lrV~Gv~~LrVvDaSv~P~~~~~n~~a~~~~iaekaAd~I~~~~ 573 (577)
T 3q9t_A 528 PKLKVHGIKKLRVADASVIPIIPDCRIQNSVYAVGEKCADMIKAEH 573 (577)
T ss_dssp TTCBBTTCBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCeEeCCCCcEEeecccccCCCCCccHHHHHHHHHHHHHHHHhhh
Confidence 44443 4999999999998752 22 244556777888887654
No 208
>3e6q_A Putative 5-carboxymethyl-2-hydroxymuconate isomer; structural genomics, APC7683, isomerase, PSI-2, protein STRU initiative; HET: GOL IMD; 1.75A {Pseudomonas aeruginosa}
Probab=23.09 E-value=88 Score=20.35 Aligned_cols=20 Identities=5% Similarity=-0.125 Sum_probs=17.8
Q ss_pred hhHHHHHHHHHHHHHHHHhC
Q 033665 2 KILSVLKYCVIWRAVERALG 21 (114)
Q Consensus 2 ~~~K~~~~~~il~~l~~~~g 21 (114)
++.|+++.+.|++.+.+.++
T Consensus 95 ~EqK~~L~e~v~~al~~~l~ 114 (146)
T 3e6q_A 95 AATRQALGESLCEVLAGAVA 114 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHEE
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 46899999999999999883
No 209
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} SCOP: d.80.1.3 PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 3smb_A* 3smc_A* 3u18_A* 4f2k_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* ...
Probab=22.24 E-value=1e+02 Score=18.55 Aligned_cols=30 Identities=7% Similarity=0.072 Sum_probs=21.6
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCceeEEEe
Q 033665 3 ILSVLKYCVIWRAVERALGPGFCRDKCDVKFV 34 (114)
Q Consensus 3 ~~K~~~~~~il~~l~~~~gP~i~~~~I~~~~~ 34 (114)
+.++++++.|.+.+++.+ ++..+++-....
T Consensus 70 ~~n~~~s~~i~~~l~~~L--gi~~~riyI~f~ 99 (114)
T 3djh_A 70 AQNRSYSKLLCGLLAERL--RISPDRVYINYY 99 (114)
T ss_dssp HHHHHHHHHHHHHHHHHH--CCCGGGEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHh--CcCcceEEEEEE
Confidence 568899999999999988 343455544433
No 210
>3kan_A D-dopachrome tautomerase; immune response, cytokine, cytokine-inhibitor C; HET: RW1; 1.13A {Homo sapiens} SCOP: d.80.1.3 PDB: 1dpt_A* 3ker_A*
Probab=21.00 E-value=1.5e+02 Score=17.99 Aligned_cols=29 Identities=10% Similarity=0.180 Sum_probs=20.7
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCceeEEE
Q 033665 3 ILSVLKYCVIWRAVERALGPGFCRDKCDVKF 33 (114)
Q Consensus 3 ~~K~~~~~~il~~l~~~~gP~i~~~~I~~~~ 33 (114)
+.++++++.+.+.+++.+| +..++|-...
T Consensus 71 ~~n~~~s~~i~~~l~~~Lg--i~~~RiyI~f 99 (117)
T 3kan_A 71 EDNRSHSAHFFEFLTKELA--LGQDRILIRF 99 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHT--CCGGGEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhC--cCcCeEEEEE
Confidence 4689999999999999883 3245544333
No 211
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=20.81 E-value=49 Score=25.38 Aligned_cols=31 Identities=19% Similarity=0.270 Sum_probs=24.2
Q ss_pred CcEEEcCCCCCC-----CCChhHHHHHHHHHHHHHh
Q 033665 70 PQLYCCGDSTFP-----GIGVPAVAASGAIVANSLV 100 (114)
Q Consensus 70 ~nLyl~G~~~~P-----G~Gv~ga~~sg~~~a~~i~ 100 (114)
.+++++||.+|. |.|+..++..+.+.+.++.
T Consensus 278 grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La 313 (499)
T 2qa2_A 278 GRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLA 313 (499)
T ss_dssp TTEEECGGGTEEECCCSSCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEecccccCCCccccchhhhHHHHHHHHHHHH
Confidence 579999998742 6788888888888776664
No 212
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=20.66 E-value=50 Score=25.35 Aligned_cols=31 Identities=19% Similarity=0.215 Sum_probs=24.0
Q ss_pred CcEEEcCCCCCC-----CCChhHHHHHHHHHHHHHh
Q 033665 70 PQLYCCGDSTFP-----GIGVPAVAASGAIVANSLV 100 (114)
Q Consensus 70 ~nLyl~G~~~~P-----G~Gv~ga~~sg~~~a~~i~ 100 (114)
.+++++||.+|. |.|+..++..+.+.+.++.
T Consensus 277 grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La 312 (500)
T 2qa1_A 277 GRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLG 312 (500)
T ss_dssp TTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEccccCCCCccccchhhhHHHHHHHHHHHH
Confidence 579999999743 6788888888888766654
No 213
>3fwu_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.80A {Leishmania major}
Probab=20.57 E-value=1.5e+02 Score=18.59 Aligned_cols=29 Identities=14% Similarity=0.142 Sum_probs=21.2
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCceeEEE
Q 033665 3 ILSVLKYCVIWRAVERALGPGFCRDKCDVKF 33 (114)
Q Consensus 3 ~~K~~~~~~il~~l~~~~gP~i~~~~I~~~~ 33 (114)
+.|+++...|.+.+++.+ ++..++|-...
T Consensus 92 e~n~~~s~~i~~~l~~~L--gI~~~riyI~f 120 (133)
T 3fwu_A 92 SEPEKVTSIVTAAITKEC--GIVADRIFVLY 120 (133)
T ss_dssp THHHHHHHHHHHHHHHHH--CCCGGGEEEEE
T ss_pred HHHHHHHHHHHHHHHHHh--CcChhhEEEEE
Confidence 568999999999999987 45345544333
No 214
>1otg_A 5-carboxymethyl-2-hydroxymuconate isomerase; 2.10A {Escherichia coli} SCOP: d.80.1.2
Probab=20.48 E-value=83 Score=19.58 Aligned_cols=19 Identities=0% Similarity=-0.087 Sum_probs=17.0
Q ss_pred hhHHHHHHHHHHHHHHHHh
Q 033665 2 KILSVLKYCVIWRAVERAL 20 (114)
Q Consensus 2 ~~~K~~~~~~il~~l~~~~ 20 (114)
++.|+++.+.+.+.+.+.+
T Consensus 73 ~eqK~~L~~~v~~~l~~~l 91 (125)
T 1otg_A 73 LESRQQAGEMLFELIKTHF 91 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 4789999999999999986
No 215
>3jyw_S 60S ribosomal protein L24(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=20.31 E-value=36 Score=17.90 Aligned_cols=15 Identities=33% Similarity=0.609 Sum_probs=11.7
Q ss_pred EcCCCCCCCCChhHH
Q 033665 74 CCGDSTFPGIGVPAV 88 (114)
Q Consensus 74 l~G~~~~PG~Gv~ga 88 (114)
+||.-++||.|..-|
T Consensus 1 F~g~~IyPG~G~~~V 15 (45)
T 3jyw_S 1 FSGAKIYPGRGTLFV 15 (45)
T ss_dssp CCCCCCCTTCCCEEC
T ss_pred CCCCcccCCCCeEEE
Confidence 478889999998543
Done!