BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033667
MMIEEWLNHDMLMKVALFGVVQALVYLILSKSSSIFSKNKKMIRSSSSSFKPARSVSIRR
MLAVLQDMPSGGEPSPSPKDMQQSPTPAPTGDIDDSIITQLPAVSASSPIHHRR

High Scoring Gene Products

Symbol, full name Information P value
AT1G05575 protein from Arabidopsis thaliana 5.6e-13
AT2G31945 protein from Arabidopsis thaliana 1.3e-11

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033667
        (114 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006102 - symbol:AT1G05575 "AT1G05575" speci...   171  5.6e-13   1
TAIR|locus:505006283 - symbol:AT2G31945 "AT2G31945" speci...   158  1.3e-11   1


>TAIR|locus:505006102 [details] [associations]
            symbol:AT1G05575 "AT1G05575" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009061
            "anaerobic respiration" evidence=IEP;IMP] [GO:0005783 "endoplasmic
            reticulum" evidence=IDA] [GO:0002679 "respiratory burst involved in
            defense response" evidence=RCA] [GO:0009723 "response to ethylene
            stimulus" evidence=RCA] [GO:0009738 "abscisic acid mediated
            signaling pathway" evidence=RCA] [GO:0009873 "ethylene mediated
            signaling pathway" evidence=RCA] [GO:0010200 "response to chitin"
            evidence=RCA] [GO:0035556 "intracellular signal transduction"
            evidence=RCA] GO:GO:0005783 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0009061 EMBL:AY086728 EMBL:BT004961 EMBL:AK118716
            IPI:IPI00520963 RefSeq:NP_563744.1 UniGene:At.42391 IntAct:Q8LC91
            STRING:Q8LC91 PaxDb:Q8LC91 EnsemblPlants:AT1G05575.1 GeneID:837061
            KEGG:ath:AT1G05575 TAIR:At1g05575 eggNOG:NOG283261
            HOGENOM:HOG000239539 InParanoid:Q8LC91 OMA:EMSPSAM PhylomeDB:Q8LC91
            ProtClustDB:CLSN2715746 ArrayExpress:Q8LC91 Genevestigator:Q8LC91
            Uniprot:Q8LC91
        Length = 89

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 37/67 (55%), Positives = 45/67 (67%)

Query:    11 MLMKVALFGVVQALVYLILXXXXXXXXXXXXMIRXXXXXFKPARSVSIRRMLAVLQDMPS 70
             MLMKV++F ++Q LVYLIL            M R     F+ ARS+SIRR+LAVLQDMP+
Sbjct:     8 MLMKVSIFALIQGLVYLILSKSSSVFSTSKTMKRAYS--FRSARSISIRRILAVLQDMPA 65

Query:    71 GGEPSPS 77
             GGE SPS
Sbjct:    66 GGEMSPS 72


>TAIR|locus:505006283 [details] [associations]
            symbol:AT2G31945 "AT2G31945" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009407 "toxin catabolic
            process" evidence=RCA] [GO:0009693 "ethylene biosynthetic process"
            evidence=RCA] [GO:0010583 "response to cyclopentenone"
            evidence=RCA] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC006533
            HOGENOM:HOG000239539 ProtClustDB:CLSN2715746 EMBL:AY075662
            EMBL:AY097404 EMBL:AY086578 IPI:IPI00536972 RefSeq:NP_565732.1
            UniGene:At.38142 STRING:Q8RU85 EnsemblPlants:AT2G31945.1
            GeneID:817753 KEGG:ath:AT2G31945 TAIR:At2g31945 eggNOG:NOG237114
            InParanoid:Q8RU85 OMA:QDIPAGD PhylomeDB:Q8RU85 ArrayExpress:Q8RU85
            Genevestigator:Q8RU85 Uniprot:Q8RU85
        Length = 95

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 37/74 (50%), Positives = 44/74 (59%)

Query:    11 MLMKVALFGVVQALVYLILXXXXXXXXXXXXMIRXXXXXFKPARSVSIRRMLAVLQDMPS 70
             MLMKVALF +VQ LVYLIL            + R     F+P RSVSIRR+LA LQD+P+
Sbjct:     8 MLMKVALFALVQGLVYLILLKSSRVFARSNSLKRAYS--FRPMRSVSIRRILAALQDIPA 65

Query:    71 GGEPSPSPKDMQQS 84
             G + SPS      S
Sbjct:    66 GDDMSPSSNGSSSS 79


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.134   0.394    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      114        97   0.00091  102 3  11 22  0.49    29
                                                     29  0.44    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  524 (56 KB)
  Total size of DFA:  103 KB (2072 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.44u 0.08s 15.52t   Elapsed:  00:00:01
  Total cpu time:  15.45u 0.08s 15.53t   Elapsed:  00:00:01
  Start:  Thu May  9 22:33:41 2013   End:  Thu May  9 22:33:42 2013

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