BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033672
(114 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SUU5|QCR71_ARATH Cytochrome b-c1 complex subunit 7-1 OS=Arabidopsis thaliana
GN=QCR7-1 PE=1 SV=1
Length = 122
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 66/88 (75%), Positives = 78/88 (88%)
Query: 1 MASLLQSLLDPKKNWLAAQHMKTISKRLRNFGLRYDDLYDPYYDLDIKEALDRLPREIVD 60
MASLL++ +DPKKN+LA HMK IS RLR +GLRYDDLYD YY +DIKEA++RLPRE+VD
Sbjct: 1 MASLLKAFIDPKKNFLARMHMKAISTRLRRYGLRYDDLYDQYYSMDIKEAMNRLPREVVD 60
Query: 61 ARNQRLKRAMDLSMKHEYLPEDLQVLVS 88
ARNQRLKRAMDLSMKHEYLP+DLQ + +
Sbjct: 61 ARNQRLKRAMDLSMKHEYLPKDLQAVQT 88
>sp|F4JWS8|QCR72_ARATH Cytochrome b-c1 complex subunit 7-2 OS=Arabidopsis thaliana
GN=QCR7-2 PE=1 SV=1
Length = 122
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 67/88 (76%), Positives = 78/88 (88%)
Query: 1 MASLLQSLLDPKKNWLAAQHMKTISKRLRNFGLRYDDLYDPYYDLDIKEALDRLPREIVD 60
MAS LQ L+DP+KN+LA HMK++S RLR +GLRYDDLYDP YDLDIKEAL+RLPREIVD
Sbjct: 1 MASFLQRLVDPRKNFLARMHMKSVSNRLRRYGLRYDDLYDPLYDLDIKEALNRLPREIVD 60
Query: 61 ARNQRLKRAMDLSMKHEYLPEDLQVLVS 88
ARNQRL RAMDLSMKHEYLP++LQ + +
Sbjct: 61 ARNQRLMRAMDLSMKHEYLPDNLQAVQT 88
>sp|P48502|QCR7_SOLTU Cytochrome b-c1 complex subunit 7 OS=Solanum tuberosum PE=1 SV=1
Length = 123
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/112 (62%), Positives = 87/112 (77%), Gaps = 1/112 (0%)
Query: 2 ASLLQSLLDPKKNWLAAQHMKTISKRLRNFGLRYDDLYDPYYDLDIKEALDRLPREIVDA 61
+S + L+DPKKN LAA HMKT+S RLRN+GLR+DDLYDP YDLD+KEAL+RLPREIVDA
Sbjct: 3 SSFSRWLVDPKKNPLAAIHMKTLSSRLRNYGLRHDDLYDPMYDLDVKEALNRLPREIVDA 62
Query: 62 RNQRLKRAMDLSMKHEYLPEDLQVLVSFILRKCTEASIFVIKQIVVVCKDLG 113
RNQRL RAMDLSMKH+YLPEDLQ + + R + + ++K+ + LG
Sbjct: 63 RNQRLLRAMDLSMKHQYLPEDLQAMQT-PFRNYLQEMLALVKRESAEREALG 113
>sp|Q5RC24|QCR7_PONAB Cytochrome b-c1 complex subunit 7 OS=Pongo abelii GN=UQCRB PE=3
SV=3
Length = 111
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 32 GLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLPED 82
GL DD Y D D+KEA+ RLP + + R R+KRA+DLS+KH+ LP++
Sbjct: 31 GLMRDDTI--YEDEDVKEAIRRLPENLYNDRMFRIKRALDLSLKHQILPKE 79
>sp|P14927|QCR7_HUMAN Cytochrome b-c1 complex subunit 7 OS=Homo sapiens GN=UQCRB PE=1
SV=2
Length = 111
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 32 GLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLPED 82
GL DD Y D D+KEA+ RLP + + R R+KRA+DL++KH+ LP++
Sbjct: 31 GLMRDDTI--YEDEDVKEAIRRLPENLYNDRMFRIKRALDLNLKHQILPKE 79
>sp|Q9D855|QCR7_MOUSE Cytochrome b-c1 complex subunit 7 OS=Mus musculus GN=Uqcrb PE=1
SV=3
Length = 111
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 30/37 (81%)
Query: 46 DIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLPED 82
D+KEA+ RLP ++ + R R+KRA+DL+M+H+ LP+D
Sbjct: 43 DVKEAIRRLPEDLYNDRMLRIKRALDLTMRHQILPKD 79
>sp|Q6BNQ5|QCR7_DEBHA Cytochrome b-c1 complex subunit 7 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=QCR7 PE=3 SV=1
Length = 126
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
Query: 29 RNFGLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLP-------- 80
R GL+++DL + +++A+ RLP E + ARN R A S+ H+ LP
Sbjct: 38 REMGLKFNDLLIEETPV-MQKAISRLPDEEIYARNYRFITAHQCSLSHQLLPANQAVKPE 96
Query: 81 EDLQVLVSFILRKCTEA 97
ED LV +IL EA
Sbjct: 97 EDTHYLVPYILEAEKEA 113
>sp|P00129|QCR7_BOVIN Cytochrome b-c1 complex subunit 7 OS=Bos taurus GN=UQCRB PE=1
SV=3
Length = 111
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 46 DIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLPED 82
D+KEA+ RLP + + R R+KRA+DLSM+ + LP++
Sbjct: 43 DVKEAIRRLPENLYNDRVFRIKRALDLSMRQQILPKE 79
>sp|O74533|QCR7_SCHPO Cytochrome b-c1 complex subunit 7 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=qcr7 PE=3 SV=1
Length = 137
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 29 RNFGLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLPED 82
R +GLRYDDL D D ++AL RLP+ R R++RAM LS++++ LP+
Sbjct: 34 RKYGLRYDDLMLEEND-DTQKALSRLPKMESYDRVYRIRRAMQLSIENKILPKS 86
>sp|P49345|QCR7_KLULA Cytochrome b-c1 complex subunit 7 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=QCR7 PE=3 SV=1
Length = 127
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 29 RNFGLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLPED 82
R GLR+DDL + +L + AL RLP + AR R+ A LS+ H LP+D
Sbjct: 39 RKMGLRFDDLIEEENEL-AQTALRRLPADESYARIYRIINAHQLSLSHHLLPKD 91
>sp|O01369|QCR7_FASHE Cytochrome b-c1 complex subunit 7 OS=Fasciola hepatica GN=UBCRBP
PE=3 SV=2
Length = 130
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 32 GLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLPED 82
GL Y D+ P+ L I EA+ RLPRE +AR+ R+ RA LS LP++
Sbjct: 43 GLLYHDVI-PHSPL-IAEAVRRLPREETEARDFRIARAFQLSASKTVLPKE 91
>sp|P46268|QCR7_CYBJA Cytochrome b-c1 complex subunit 7 OS=Cyberlindnera jadinii
GN=QCR7 PE=3 SV=1
Length = 126
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 29 RNFGLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLPED 82
R GL++DDL + +++AL RLP++ + ARN R+ A + H L D
Sbjct: 38 RQLGLKFDDLIHEE-NPTVQKALSRLPKDEIYARNFRMLTAAQCGITHHLLSAD 90
>sp|Q751U4|QCR7_ASHGO Cytochrome b-c1 complex subunit 7 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=QCR7
PE=3 SV=1
Length = 126
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 29 RNFGLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLP 80
R GL++DDL D+ ++ AL RLP E AR R+ +A L + H LP
Sbjct: 39 RQLGLKFDDLIAEENDI-VQTALRRLPEEESYARVFRIIQAHQLELTHHLLP 89
>sp|Q54M82|QCR7_DICDI Probable cytochrome b-c1 complex subunit 7 OS=Dictyostelium
discoideum GN=DDB_G0286171 PE=3 SV=1
Length = 109
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 29 RNFGLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLPE 81
R GL + DLY+ +E RLP +++ R++RL+ A+DLS+K + LPE
Sbjct: 24 RKMGLYFADLYNN--TEANQEVYRRLPFDVLVQRDRRLRVAIDLSLKKQLLPE 74
>sp|Q871K1|QCR7_NEUCR Cytochrome b-c1 complex subunit 7 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=qcr-7 PE=3 SV=1
Length = 123
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 13/81 (16%)
Query: 5 LQSLLDPKKNWL--AAQHMKTISKRLRNFGLRYDDLYDPYYDLDIKEALDRL-PREIVDA 61
L +L P NW AA + R GLR DDL + + AL RL P+E D
Sbjct: 16 LNKMLKPVSNWYINAAGY--------RQMGLRADDLISEENET-VLAALQRLSPKESYD- 65
Query: 62 RNQRLKRAMDLSMKHEYLPED 82
R R++RA LS+ H+ LP++
Sbjct: 66 RIYRIRRATQLSLTHKLLPKN 86
>sp|P00128|QCR7_YEAST Cytochrome b-c1 complex subunit 7 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=QCR7 PE=1 SV=2
Length = 127
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 29 RNFGLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLP-------- 80
+ GL++DDL + ++ AL RLP + AR R+ RA + H LP
Sbjct: 39 KKLGLKFDDLIAEENPI-MQTALRRLPEDESYARAYRIIRAHQTELTHHLLPRNEWIKAQ 97
Query: 81 EDLQVLVSFIL 91
ED+ L+ +IL
Sbjct: 98 EDVPYLLPYIL 108
>sp|Q65VB8|DNAA_MANSM Chromosomal replication initiator protein DnaA OS=Mannheimia
succiniciproducens (strain MBEL55E) GN=dnaA PE=3 SV=1
Length = 457
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 52 DRLPREIVDARNQRLKRAMDLSMKHEYLPEDLQVLVSFILRKCTEASIFVIKQI 105
DR PREI + + RLK + P DL+ V+ +++K E +I++ +++
Sbjct: 259 DRYPREI-EKIDDRLKSRFSWGLSIAIEPPDLETRVAILMKKAEEKNIYLPEEV 311
>sp|Q03K93|META_STRTD Homoserine O-succinyltransferase OS=Streptococcus thermophilus
(strain ATCC BAA-491 / LMD-9) GN=metA PE=3 SV=1
Length = 314
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 10/63 (15%)
Query: 18 AQHMKTISKRLRNFGLRYDDLYDPYYD--LDIKEALDRLPREIVDARNQRLKRAMDLSMK 75
A+HM+T K +D++ D YYD + ++++P E VD Q L R D S K
Sbjct: 82 AEHMETFYKT-------FDEIKDKYYDGLIVTGAPVEQMPFEEVDYW-QELTRVFDWSKK 133
Query: 76 HEY 78
H Y
Sbjct: 134 HVY 136
>sp|Q5LZD5|META_STRT1 Homoserine O-succinyltransferase OS=Streptococcus thermophilus
(strain CNRZ 1066) GN=metA PE=3 SV=1
Length = 314
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 10/63 (15%)
Query: 18 AQHMKTISKRLRNFGLRYDDLYDPYYD--LDIKEALDRLPREIVDARNQRLKRAMDLSMK 75
A+HM+T K +D++ D YYD + ++++P E VD Q L R D S K
Sbjct: 82 AEHMETFYKT-------FDEIKDKYYDGLIVTGAPVEQMPFEEVDYW-QELTRVFDWSKK 133
Query: 76 HEY 78
H Y
Sbjct: 134 HVY 136
>sp|A7ZAW7|DNAA_CAMC1 Chromosomal replication initiator protein DnaA OS=Campylobacter
concisus (strain 13826) GN=dnaA PE=3 SV=1
Length = 436
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 30/52 (57%)
Query: 55 PREIVDARNQRLKRAMDLSMKHEYLPEDLQVLVSFILRKCTEASIFVIKQIV 106
P +I+ ++RLK + S+ + P +L ++ I++KC I++ K+++
Sbjct: 238 PAKILKGFDERLKSRFEQSIMADITPPELDTKIAIIIKKCEFDKIYLNKEVI 289
>sp|P75234|Y544_MYCPN Uncharacterized protein MG366 homolog OS=Mycoplasma pneumoniae
(strain ATCC 29342 / M129) GN=MPN_544 PE=4 SV=1
Length = 664
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 16 LAAQHMKTISKRLRNFGLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRA 69
L +H K + + ++ D + DP +++DI E L+ P + D++N R+K A
Sbjct: 32 LLKKHHKQVDTEI---DVQEDLIEDPVFEIDILELLNEAPELLFDSKNPRVKEA 82
>sp|Q6FSJ2|QCR7_CANGA Cytochrome b-c1 complex subunit 7 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=QCR7 PE=3 SV=1
Length = 128
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 29 RNFGLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLP-------- 80
R GLR+DDL + ++ AL RLP ARN R+ RA + LP
Sbjct: 39 RKLGLRFDDLIAEENPI-MQTALKRLPEGESYARNYRIIRAHQSELTKHLLPRNEWVKAQ 97
Query: 81 EDLQVLVSFIL 91
+D+ L+ +IL
Sbjct: 98 DDVPYLLPYIL 108
>sp|Q6YP73|UL13_VZVO Serine/threonine-protein kinase UL13 homolog OS=Varicella-zoster
virus (strain Oka vaccine) GN=ORF47 PE=3 SV=1
Length = 510
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Query: 28 LRNFGLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLPEDLQVLV 87
L F L+ L P YD+D+ E + RL R + + +D + H +L DL +
Sbjct: 193 LLGFSLQTKQLLFPAYDMDMDEYIVRLSRRLT------IPDHIDRKIAHVFL--DLAQAL 244
Query: 88 SFILRKC 94
+F+ R C
Sbjct: 245 TFLNRTC 251
>sp|P09296|UL13_VZVD Serine/threonine-protein kinase UL13 homolog OS=Varicella-zoster
virus (strain Dumas) GN=ORF47 PE=1 SV=1
Length = 510
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Query: 28 LRNFGLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRAMDLSMKHEYLPEDLQVLV 87
L F L+ L P YD+D+ E + RL R + + +D + H +L DL +
Sbjct: 193 LLGFSLQTKQLLFPAYDMDMDEYIVRLSRRLT------IPDHIDRKIAHVFL--DLAQAL 244
Query: 88 SFILRKC 94
+F+ R C
Sbjct: 245 TFLNRTC 251
>sp|O01374|QCR7_SCHMA Cytochrome b-c1 complex subunit 7 OS=Schistosoma mansoni PE=3
SV=1
Length = 130
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 49 EALDRLPREIVDARNQRLKRAMDLSMKHEYLPED 82
EAL RLPRE+ +AR+ R+ RA L LP++
Sbjct: 57 EALRRLPRELQEARDFRIARASLLYASKHVLPKE 90
>sp|Q6M183|MPTA_METMP GTP cyclohydrolase MptA OS=Methanococcus maripaludis (strain S2 /
LL) GN=mptA PE=3 SV=1
Length = 315
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 49 EALDRLPREIVDARNQRLKRAMDLSMKHEYLPEDLQVLV 87
EA + P+ + D + +KR +D+ +YLPED QVLV
Sbjct: 247 EAAHKNPKFVEDCAREMIKRVVDV---FDYLPEDTQVLV 282
>sp|C4ZBG8|FTHS_EUBR3 Formate--tetrahydrofolate ligase OS=Eubacterium rectale (strain
ATCC 33656 / VPI 0990) GN=fhs PE=3 SV=1
Length = 556
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 14/67 (20%)
Query: 16 LAAQHMKTISKRLRNFGLRYDDLYDPYYDLDIKEALDRLPREIVD--------ARNQRLK 67
LA + ++TI + NF + YDD L +KE ++ + +EI A + LK
Sbjct: 419 LANKVLETIEHKESNFKVLYDD------SLSLKEKIETVAKEIYGADGVTYSPAAERELK 472
Query: 68 RAMDLSM 74
R DL M
Sbjct: 473 RITDLGM 479
>sp|Q2R1U4|CK5P1_ORYSJ CDK5RAP1-like protein OS=Oryza sativa subsp. japonica
GN=Os11g0592800 PE=2 SV=1
Length = 600
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 9 LDPKKNWLAAQHMKTISKRLRNFGLRYDDLYD 40
L+P KNW ++ ++ K ++N GLR+ DL D
Sbjct: 318 LEPGKNWELSEGFSSMCK-VKNMGLRFADLLD 348
>sp|A4G0F9|MPTA_METM5 GTP cyclohydrolase MptA OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=mptA PE=3 SV=1
Length = 315
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 49 EALDRLPREIVDARNQRLKRAMDLSMKHEYLPEDLQVLV 87
EA + P+ + D + +KR +D+ +YLPED QVLV
Sbjct: 247 EAAHKNPKFVEDCAREMIKRVVDV---FDYLPEDTQVLV 282
>sp|P22010|GRP78_KLULA 78 kDa glucose-regulated protein homolog OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=GRP78 PE=3 SV=1
Length = 679
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 16/101 (15%)
Query: 10 DPKKNWLAAQHMKTISKRLRNFGLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRA 69
D KN A+ TI R GL+Y+D P DIK LP +V+ N+
Sbjct: 100 DAAKNQAASNPKNTIFDIKRLIGLQYND---PTVQRDIKH----LPYTVVNKGNKPYVEV 152
Query: 70 MDLSMKHEYLPEDL---------QVLVSFILRKCTEASIFV 101
K E+ PE++ Q+ ++ +K T A + V
Sbjct: 153 TVKGEKKEFTPEEVSGMILGKMKQIAEDYLGKKVTHAVVTV 193
>sp|B7K2B6|SYH_CYAP8 Histidine--tRNA ligase OS=Cyanothece sp. (strain PCC 8801) GN=hisS
PE=3 SV=1
Length = 429
Score = 29.6 bits (65), Expect = 5.5, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 28 LRNFGLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLK 67
L N+ L Y + DP D ++ L+R P I+D++NQR K
Sbjct: 180 LVNYFLPYKNELDP----DSQDRLERNPLRILDSKNQRTK 215
>sp|Q5M3Y7|META_STRT2 Homoserine O-succinyltransferase OS=Streptococcus thermophilus
(strain ATCC BAA-250 / LMG 18311) GN=metA PE=3 SV=1
Length = 314
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
Query: 18 AQHMKTISKRLRNFGLRYDDLYDPYYD--LDIKEALDRLPREIVDARNQRLKRAMDLSMK 75
A+HM+T K +D++ D YYD + ++++P E VD Q L R D S
Sbjct: 82 AEHMETFYKT-------FDEIKDKYYDGLIVTGAPVEQMPFEEVDYW-QELTRVFDWSKN 133
Query: 76 HEY 78
H Y
Sbjct: 134 HVY 136
>sp|Q5AEF0|CAF17_CANAL Putative transferase CAF17, mitochondrial OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=CAF17 PE=3 SV=1
Length = 469
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 17/19 (89%)
Query: 29 RNFGLRYDDLYDPYYDLDI 47
+N+GL ++D+YDP Y+++I
Sbjct: 65 KNYGLMHEDIYDPDYNINI 83
>sp|Q24895|GRP78_ECHMU 78 kDa glucose-regulated protein OS=Echinococcus multilocularis
GN=GRP78 PE=2 SV=1
Length = 649
Score = 29.6 bits (65), Expect = 5.9, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Query: 10 DPKKNWLAAQHMKTISKRLRNFGLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRA 69
D KN L + T+ R G YDD D++ + R P ++++ N+ +
Sbjct: 78 DAAKNQLTSNPKNTLFDAKRLIGRDYDDK-------DVQGDIKRYPFKVINKNNKPYMKV 130
Query: 70 MDLSMKHEYLPEDLQVLVSFILRKCTEA 97
S + + PE++ +V +++ EA
Sbjct: 131 QVGSEEKGFAPEEVSAMVLSKMKEIAEA 158
>sp|P16474|GRP78_YEAST 78 kDa glucose-regulated protein homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=KAR2 PE=1
SV=1
Length = 682
Score = 29.6 bits (65), Expect = 6.1, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 10 DPKKNWLAAQHMKTISKRLRNFGLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRA 69
D KN +AA TI R GL+Y+ D +++ + LP +V N+ K A
Sbjct: 99 DAAKNQVAANPQNTIFDIKRLIGLKYN-------DRSVQKDIKHLPFNVV---NKDGKPA 148
Query: 70 MDLSMKHE---YLPEDLQVLVSFILRKCTE 96
+++S+K E + PE++ ++ +++ E
Sbjct: 149 VEVSVKGEKKVFTPEEISGMILGKMKQIAE 178
>sp|Q9CLQ4|DNAA_PASMU Chromosomal replication initiator protein DnaA OS=Pasteurella
multocida (strain Pm70) GN=dnaA PE=3 SV=1
Length = 451
Score = 29.6 bits (65), Expect = 6.4, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 52 DRLPREIVDARNQRLKRAMDLSMKHEYLPEDLQVLVSFILRKCTEASIFVIKQI 105
DR P+EI + +RLK + P +L+ V+ +L+K E +I++ +++
Sbjct: 253 DRYPKEI-EKLEERLKSRFGWGLTTAIEPPELETRVAILLKKAEEKNIYLPEEV 305
>sp|P11146|HSP7B_DROME Heat shock 70 kDa protein cognate 2 OS=Drosophila melanogaster
GN=Hsc70-2 PE=1 SV=2
Length = 633
Score = 29.3 bits (64), Expect = 8.4, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 10 DPKKNWLAAQHMKTISKRLRNFGLRYDDLYDPYYDLDIKEALDRLPREIVDARNQRLKRA 69
DP KN +A T+ R G ++D D I+E L P +++ N++ K
Sbjct: 53 DPAKNQVAMNAKNTVFDAKRLIGRKFD-------DKKIQEDLKLWPFKVI---NEKGKPK 102
Query: 70 MDLSMKHE---YLPEDLQVLVSFILRKCTE 96
+++ K E + PE++ +V +R+ E
Sbjct: 103 IEVEFKGERKRFAPEEISSMVLTKMREIAE 132
>sp|P47606|Y366_MYCGE Uncharacterized protein MG366 OS=Mycoplasma genitalium (strain
ATCC 33530 / G-37 / NCTC 10195) GN=MG366 PE=4 SV=1
Length = 667
Score = 28.9 bits (63), Expect = 9.3, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 24/36 (66%)
Query: 40 DPYYDLDIKEALDRLPREIVDARNQRLKRAMDLSMK 75
DP ++LD+ E L+ P ++D++N R++ A ++ K
Sbjct: 52 DPVFELDVLELLNEDPMLLLDSKNPRVQEAKIIANK 87
>sp|Q7MSY2|DNAA_WOLSU Chromosomal replication initiator protein DnaA OS=Wolinella
succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 /
NCTC 11488 / FDC 602W) GN=dnaA PE=3 SV=1
Length = 437
Score = 28.9 bits (63), Expect = 9.5, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 52 DRLPREIVDARNQRLKRAMDLSMKHEYLPEDLQVLVSFILRKCTEASIFVIKQIV 106
D+ P++I +RLK + M + P +L+ ++ I +KC I++ +I+
Sbjct: 237 DKTPKQIA-GLEERLKSRFEWGMVSDIQPPELETKINIIKKKCEFDGIYLSNEII 290
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.140 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,677,376
Number of Sequences: 539616
Number of extensions: 1471961
Number of successful extensions: 6759
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 6738
Number of HSP's gapped (non-prelim): 50
length of query: 114
length of database: 191,569,459
effective HSP length: 82
effective length of query: 32
effective length of database: 147,320,947
effective search space: 4714270304
effective search space used: 4714270304
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)