BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033674
(114 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VO4|A Chain A, Glutathione Transferase From Glycine Max
pdb|2VO4|B Chain B, Glutathione Transferase From Glycine Max
pdb|3FHS|A Chain A, Glutathione Transferase From Glycine Max At 2.7 Resolution
pdb|3FHS|B Chain B, Glutathione Transferase From Glycine Max At 2.7 Resolution
Length = 219
Score = 145 bits (366), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 65/114 (57%), Positives = 82/114 (71%)
Query: 1 MYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFY 60
+YD RK WT+KG LK LE QLGDK +FGGDN G+VD++L+PFY WF
Sbjct: 106 IYDLGRKIWTSKGEEKEAAKKEFIEALKLLEEQLGDKTYFGGDNLGFVDIALVPFYTWFK 165
Query: 61 TYETCGKFNVEAECPKFIAWVKRCLQRETVAKALPDGKKVFEFVSVMRTNLGLE 114
YET G N+E+ECPKFIAW KRCLQ+E+VAK+LPD +KV+EF+ +R LG+E
Sbjct: 166 AYETFGTLNIESECPKFIAWAKRCLQKESVAKSLPDQQKVYEFIMDLRKKLGIE 219
>pdb|1OYJ|A Chain A, Crystal Structure Solution Of Rice Gst1 (Osgstu1) In
Complex With Glutathione.
pdb|1OYJ|B Chain B, Crystal Structure Solution Of Rice Gst1 (Osgstu1) In
Complex With Glutathione.
pdb|1OYJ|C Chain C, Crystal Structure Solution Of Rice Gst1 (Osgstu1) In
Complex With Glutathione.
pdb|1OYJ|D Chain D, Crystal Structure Solution Of Rice Gst1 (Osgstu1) In
Complex With Glutathione
Length = 231
Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Query: 1 MYDSLRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGDKPFFGGDNFGY---VDLSLIPFYC 57
+YD + W KG +L+TLE +LGD+ FFGG G VD++L+PF
Sbjct: 115 LYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTA 174
Query: 58 WFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKALPDGKKVFEFVSVMRTNLGLE 114
WFY+YE CG F+VE P+ AW +RC + ++V K LP +KV++FV V++ G+E
Sbjct: 175 WFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKKKYGVE 231
>pdb|4J2F|A Chain A, Crystal Structure Of A Glutathione Transferase Family
Member From Ricinus Communis, Target Efi-501866
Length = 223
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
Query: 11 TKGXXXXXXXXXXXXVLKTLEGQ---LGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGK 67
TKG VLKT+E + D +FGGD G VD++ W E
Sbjct: 114 TKGEELEKAVKNCLEVLKTIEEHAMGVSDDKYFGGDKIGIVDIAFCGIAHWLGVIEEVAG 173
Query: 68 FNV--EAECPKFIAWVKRCLQRETVAKALPDGKKVFEFVSVMR 108
V + P+ AW + + + + LPD ++ F R
Sbjct: 174 VKVLESQKFPRLHAWTENFKEAPIIKENLPDRDQMTAFFKRRR 216
>pdb|3ERF|A Chain A, Crystal Structure Of Gtt2 From Saccharomyces Cerevisiae
pdb|3ERG|A Chain A, Crystal Structure Of Gtt2 From Saccharomyces Cerevisiae In
Complex With Glutathione Sulfnate
pdb|3ERG|B Chain B, Crystal Structure Of Gtt2 From Saccharomyces Cerevisiae In
Complex With Glutathione Sulfnate
pdb|3IBH|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Gtt2 In
Complex With Glutathione
Length = 233
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 34 LGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKA 93
L ++P+ GD+F D+++I + K V EC AW KR QR +V K
Sbjct: 170 LRERPYVAGDSFSMADITVIAGLI----FAAIVKLQVPEECEALRAWYKRMQQRPSVKKL 225
Query: 94 L 94
L
Sbjct: 226 L 226
>pdb|1G6W|A Chain A, Crystal Structure Of The Globular Region Of The Prion
Protein Ure2 From The Yeast Saccaromyces Cerevisiae
pdb|1G6W|B Chain B, Crystal Structure Of The Globular Region Of The Prion
Protein Ure2 From The Yeast Saccaromyces Cerevisiae
pdb|1G6W|C Chain C, Crystal Structure Of The Globular Region Of The Prion
Protein Ure2 From The Yeast Saccaromyces Cerevisiae
pdb|1G6W|D Chain D, Crystal Structure Of The Globular Region Of The Prion
Protein Ure2 From The Yeast Saccaromyces Cerevisiae
pdb|1G6Y|A Chain A, Crystal Structure Of The Globular Region Of The Prion
Protien Ure2 From Yeast Saccharomyces Cerevisiae
pdb|1G6Y|B Chain B, Crystal Structure Of The Globular Region Of The Prion
Protien Ure2 From Yeast Saccharomyces Cerevisiae
Length = 261
Score = 32.7 bits (73), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 42 GDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKAL 94
GD DL+ +P W + G N++ E P+ W K ++R V KAL
Sbjct: 210 GDKLTIADLAFVP---WNNVVDRIG-INIKIEFPEVYKWTKHMMRRPAVIKAL 258
>pdb|1JZR|A Chain A, Ure2p In Complex With Glutathione
pdb|1JZR|B Chain B, Ure2p In Complex With Glutathione
pdb|1JZR|C Chain C, Ure2p In Complex With Glutathione
pdb|1JZR|D Chain D, Ure2p In Complex With Glutathione
pdb|1K0A|A Chain A, Ure2p In Complex With S-Hexylglutathione
pdb|1K0A|B Chain B, Ure2p In Complex With S-Hexylglutathione
pdb|1K0B|A Chain A, Ure2p In Complex With Glutathione
pdb|1K0B|B Chain B, Ure2p In Complex With Glutathione
pdb|1K0B|C Chain C, Ure2p In Complex With Glutathione
pdb|1K0B|D Chain D, Ure2p In Complex With Glutathione
pdb|1K0C|A Chain A, Ure2p In Complex With S-P-Nitrobenzylglutathione
pdb|1K0C|B Chain B, Ure2p In Complex With S-P-Nitrobenzylglutathione
pdb|1K0C|C Chain C, Ure2p In Complex With S-P-Nitrobenzylglutathione
pdb|1K0C|D Chain D, Ure2p In Complex With S-P-Nitrobenzylglutathione
pdb|1K0D|A Chain A, Ure2p In Complex With Glutathione
pdb|1K0D|B Chain B, Ure2p In Complex With Glutathione
pdb|1K0D|C Chain C, Ure2p In Complex With Glutathione
pdb|1K0D|D Chain D, Ure2p In Complex With Glutathione
Length = 260
Score = 32.7 bits (73), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 42 GDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKAL 94
GD DL+ +P W + G N++ E P+ W K ++R V KAL
Sbjct: 209 GDKLTIADLAFVP---WNNVVDRIG-INIKIEFPEVYKWTKHMMRRPAVIKAL 257
>pdb|1GWC|A Chain A, The Structure Of A Tau Class Glutathione S-Transferase
From Wheat, Active In Herbicide Detoxification
pdb|1GWC|B Chain B, The Structure Of A Tau Class Glutathione S-Transferase
From Wheat, Active In Herbicide Detoxification
pdb|1GWC|C Chain C, The Structure Of A Tau Class Glutathione S-Transferase
From Wheat, Active In Herbicide Detoxification
Length = 230
Score = 32.3 bits (72), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 48 VDLSLIPFYCWFYTYETCG--KFNVEAECPKFIAWVKRCLQRETVAKALPDGKKVFEF 103
VD++L W E K A+ P AWV+R ++ + ALPD ++ EF
Sbjct: 161 VDVALGGVLSWMKVTEALSGDKIFDAAKTPLLAAWVERFIELDAAKAALPDVGRLLEF 218
>pdb|1HQO|A Chain A, Crystal Structure Of The Nitrogen Regulation Fragment Of
The Yeast Prion Protein Ure2p
pdb|1HQO|B Chain B, Crystal Structure Of The Nitrogen Regulation Fragment Of
The Yeast Prion Protein Ure2p
Length = 258
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Query: 42 GDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKAL 94
GD DL+ +P W + G N++ E P+ W K +R V KAL
Sbjct: 207 GDKLTIADLAFVP---WNNVVDRIG-INIKIEFPEVYKWTKHXXRRPAVIKAL 255
>pdb|3QAG|A Chain A, Human Glutathione Transferase O2 With Glutathione -New
Crystal Form
pdb|3Q18|A Chain A, Human Glutathione Transferase O2
pdb|3Q18|B Chain B, Human Glutathione Transferase O2
pdb|3Q19|A Chain A, Human Glutathione Transferase O2
pdb|3Q19|B Chain B, Human Glutathione Transferase O2
Length = 239
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 39 FFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKALPDGK 98
FFGG + +D L P WF + G + + P W+ TV+ L D K
Sbjct: 165 FFGGTSISMIDYLLWP---WFERLDVYGILDCVSHTPALRLWISAMKWDPTVSALLMD-K 220
Query: 99 KVFE 102
+F+
Sbjct: 221 SIFQ 224
>pdb|4AGS|A Chain A, Leishmania Tdr1 - A Unique Trimeric Glutathione
Transferase
pdb|4AGS|B Chain B, Leishmania Tdr1 - A Unique Trimeric Glutathione
Transferase
pdb|4AGS|C Chain C, Leishmania Tdr1 - A Unique Trimeric Glutathione
Transferase
Length = 471
Score = 27.3 bits (59), Expect = 2.0, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 14/79 (17%)
Query: 30 LEGQL-----GDKPFFGGDNFGYVDLSLIPFYCWFYTY--ETCGKFNVEAECPKFIAWVK 82
LE QL G+ PFFGG D++++PF + E G +++ A P +
Sbjct: 380 LEQQLAKHPFGEGPFFGGKRXNAGDVAILPFLVRAKAFXPEFSGGYDLFAHFPLLNGLAE 439
Query: 83 RCLQRETVAKALPDGKKVF 101
A P+ K VF
Sbjct: 440 -------AGXATPEAKSVF 451
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.142 0.468
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,211,161
Number of Sequences: 62578
Number of extensions: 116653
Number of successful extensions: 284
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 273
Number of HSP's gapped (non-prelim): 14
length of query: 114
length of database: 14,973,337
effective HSP length: 77
effective length of query: 37
effective length of database: 10,154,831
effective search space: 375728747
effective search space used: 375728747
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 45 (21.9 bits)