Query 033674
Match_columns 114
No_of_seqs 101 out of 1147
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 04:59:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033674.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/033674hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd03198 GST_C_CLIC GST_C famil 99.8 2.7E-18 5.9E-23 106.7 11.1 104 1-104 11-132 (134)
2 cd03201 GST_C_DHAR GST_C famil 99.8 3.8E-18 8.3E-23 104.7 10.3 104 1-105 14-119 (121)
3 cd03184 GST_C_Omega GST_C fami 99.8 4E-18 8.6E-23 104.8 9.0 104 2-106 17-123 (124)
4 cd03185 GST_C_Tau GST_C family 99.8 1.8E-17 3.9E-22 101.7 11.6 103 4-106 21-125 (126)
5 cd03190 GST_C_ECM4_like GST_C 99.7 3.1E-17 6.7E-22 103.2 9.6 106 4-109 22-131 (142)
6 TIGR00862 O-ClC intracellular 99.7 4.5E-16 9.7E-21 105.2 11.9 106 3-108 107-232 (236)
7 cd03186 GST_C_SspA GST_N famil 99.7 7.4E-16 1.6E-20 92.2 10.1 84 6-93 23-106 (107)
8 cd03203 GST_C_Lambda GST_C fam 99.6 1.6E-15 3.4E-20 92.9 8.6 82 22-104 34-119 (120)
9 cd03209 GST_C_Mu GST_C family, 99.6 3.1E-15 6.6E-20 91.6 9.4 91 4-98 19-111 (121)
10 cd03207 GST_C_8 GST_C family, 99.6 2.8E-15 6E-20 89.1 8.9 78 13-96 25-102 (103)
11 PF00043 GST_C: Glutathione S- 99.6 4.4E-15 9.5E-20 86.9 8.4 72 13-88 23-95 (95)
12 KOG0406 Glutathione S-transfer 99.6 1.8E-14 3.8E-19 96.3 11.9 107 6-112 116-227 (231)
13 cd03210 GST_C_Pi GST_C family, 99.6 4.4E-15 9.6E-20 91.5 8.4 91 3-97 19-113 (126)
14 cd03188 GST_C_Beta GST_C famil 99.6 1E-14 2.3E-19 87.7 8.4 75 15-94 40-114 (114)
15 cd03196 GST_C_5 GST_C family, 99.6 1.2E-14 2.6E-19 88.4 8.5 77 15-93 38-114 (115)
16 cd03187 GST_C_Phi GST_C family 99.6 9.9E-15 2.2E-19 88.4 8.1 79 13-94 40-118 (118)
17 cd03208 GST_C_Alpha GST_C fami 99.6 2.4E-14 5.2E-19 89.6 8.6 72 21-96 42-115 (137)
18 PRK09481 sspA stringent starva 99.6 5.7E-14 1.2E-18 93.4 10.4 83 13-99 122-205 (211)
19 cd03191 GST_C_Zeta GST_C famil 99.6 3.8E-14 8.3E-19 86.5 8.8 75 17-96 43-119 (121)
20 cd03177 GST_C_Delta_Epsilon GS 99.6 2.3E-14 5E-19 87.2 7.6 78 14-95 34-111 (118)
21 PF13410 GST_C_2: Glutathione 99.6 2.5E-14 5.4E-19 79.3 7.1 68 14-83 2-69 (69)
22 cd03178 GST_C_Ure2p_like GST_C 99.5 3.8E-14 8.3E-19 85.3 7.4 78 13-94 35-112 (113)
23 cd03182 GST_C_GTT2_like GST_C 99.5 6.5E-14 1.4E-18 84.8 8.1 74 13-90 44-117 (117)
24 cd03183 GST_C_Theta GST_C fami 99.5 1E-13 2.2E-18 85.1 9.0 78 13-94 40-120 (126)
25 cd03204 GST_C_GDAP1 GST_C fami 99.5 9.5E-14 2.1E-18 83.9 8.1 74 13-90 24-111 (111)
26 PLN02378 glutathione S-transfe 99.5 1.3E-13 2.8E-18 91.9 9.3 88 18-105 118-208 (213)
27 PRK10542 glutathionine S-trans 99.5 8.4E-14 1.8E-18 91.6 8.2 76 16-96 122-197 (201)
28 PLN02817 glutathione dehydroge 99.5 2.1E-13 4.5E-18 93.8 10.3 87 20-106 173-261 (265)
29 cd03181 GST_C_EFB1gamma GST_C 99.5 8E-14 1.7E-18 85.1 7.4 83 13-97 35-117 (123)
30 cd03180 GST_C_2 GST_C family, 99.5 1.9E-13 4.2E-18 81.7 8.3 72 14-90 39-110 (110)
31 cd03206 GST_C_7 GST_C family, 99.5 2.2E-13 4.9E-18 80.6 7.8 71 15-90 30-100 (100)
32 cd03189 GST_C_GTT1_like GST_C 99.5 3.3E-13 7.2E-18 81.9 8.2 69 15-88 51-119 (119)
33 PRK13972 GSH-dependent disulfi 99.5 3.4E-13 7.4E-18 89.8 7.9 78 14-96 128-205 (215)
34 TIGR01262 maiA maleylacetoacet 99.5 5.7E-13 1.2E-17 88.2 8.8 77 16-97 127-205 (210)
35 PLN02395 glutathione S-transfe 99.5 3.7E-13 7.9E-18 89.4 7.8 81 14-96 130-210 (215)
36 PLN02473 glutathione S-transfe 99.5 3.1E-13 6.7E-18 89.8 7.2 79 15-95 132-210 (214)
37 PTZ00057 glutathione s-transfe 99.5 2.8E-13 6E-18 89.8 6.9 77 17-97 122-200 (205)
38 PRK10357 putative glutathione 99.4 1.7E-12 3.8E-17 85.5 8.7 79 15-96 122-200 (202)
39 PRK11752 putative S-transferas 99.4 2.1E-12 4.5E-17 88.7 8.2 83 15-97 175-259 (264)
40 cd03202 GST_C_etherase_LigE GS 99.4 3.8E-12 8.3E-17 78.3 8.1 68 16-86 56-123 (124)
41 cd03195 GST_C_4 GST_C family, 99.4 4.5E-12 9.7E-17 76.9 7.9 73 15-95 39-112 (114)
42 cd03194 GST_C_3 GST_C family, 99.4 7E-12 1.5E-16 76.1 8.4 71 17-95 40-113 (114)
43 cd03193 GST_C_Metaxin GST_C fa 99.3 1.1E-11 2.4E-16 71.7 8.1 72 13-85 14-88 (88)
44 cd00299 GST_C_family Glutathio 99.3 6.5E-12 1.4E-16 73.3 7.2 70 13-84 31-100 (100)
45 cd03179 GST_C_1 GST_C family, 99.3 6.6E-12 1.4E-16 74.4 6.9 68 13-85 38-105 (105)
46 cd03192 GST_C_Sigma_like GST_C 99.3 9.7E-12 2.1E-16 73.8 6.4 68 13-84 34-104 (104)
47 PF14497 GST_C_3: Glutathione 99.2 2.2E-11 4.7E-16 72.0 5.6 67 14-86 31-99 (99)
48 COG0625 Gst Glutathione S-tran 99.2 6.5E-11 1.4E-15 78.6 8.4 73 14-91 127-199 (211)
49 KOG1422 Intracellular Cl- chan 99.2 1.1E-10 2.4E-15 76.6 7.9 108 2-109 106-218 (221)
50 PRK10387 glutaredoxin 2; Provi 99.2 3.5E-11 7.6E-16 79.6 5.6 66 18-90 142-207 (210)
51 KOG4420 Uncharacterized conser 99.2 1.6E-10 3.4E-15 78.2 8.5 98 14-112 201-303 (325)
52 cd03200 GST_C_JTV1 GST_C famil 99.2 8.7E-11 1.9E-15 69.3 6.4 58 21-86 38-95 (96)
53 PRK15113 glutathione S-transfe 99.2 1.1E-10 2.4E-15 77.8 7.2 75 16-98 135-210 (214)
54 cd03205 GST_C_6 GST_C family, 99.1 2.8E-10 6E-15 67.1 6.7 67 13-84 32-98 (98)
55 COG0435 ECM4 Predicted glutath 99.1 6.4E-11 1.4E-15 80.6 2.4 95 13-107 200-297 (324)
56 cd03211 GST_C_Metaxin2 GST_C f 99.0 6E-10 1.3E-14 68.8 5.2 70 15-85 54-126 (126)
57 KOG2903 Predicted glutathione 99.0 1E-10 2.2E-15 79.1 1.4 102 6-107 190-299 (319)
58 cd03212 GST_C_Metaxin1_3 GST_C 99.0 3E-09 6.5E-14 66.6 7.3 71 15-86 61-134 (137)
59 KOG1695 Glutathione S-transfer 99.0 2.9E-09 6.3E-14 70.7 7.0 77 18-97 123-201 (206)
60 KOG0867 Glutathione S-transfer 99.0 5.2E-09 1.1E-13 70.5 8.3 83 13-97 128-210 (226)
61 cd03197 GST_C_mPGES2 GST_C fam 98.9 4.4E-09 9.5E-14 66.4 6.7 66 17-86 78-145 (149)
62 TIGR02182 GRXB Glutaredoxin, G 98.9 1.5E-09 3.2E-14 72.3 4.7 66 17-90 140-206 (209)
63 PLN02907 glutamate-tRNA ligase 98.9 8E-09 1.7E-13 79.5 7.0 66 22-89 94-159 (722)
64 KOG0868 Glutathione S-transfer 98.8 2.8E-08 6E-13 64.1 6.6 76 16-96 130-207 (217)
65 PF14834 GST_C_4: Glutathione 98.4 3.3E-06 7.2E-11 50.9 7.7 71 17-95 42-113 (117)
66 KOG3027 Mitochondrial outer me 98.1 7.4E-06 1.6E-10 54.2 4.8 74 13-87 172-248 (257)
67 KOG4244 Failed axon connection 97.9 1.1E-05 2.3E-10 55.2 3.5 69 18-86 203-272 (281)
68 PF04399 Glutaredoxin2_C: Glut 97.8 0.00013 2.7E-09 45.4 6.3 67 17-90 58-124 (132)
69 cd03199 GST_C_GRX2 GST_C famil 97.5 0.00091 2E-08 41.4 6.6 66 18-90 60-125 (128)
70 KOG3029 Glutathione S-transfer 97.3 0.00067 1.4E-08 47.1 5.2 66 19-87 289-355 (370)
71 KOG3028 Translocase of outer m 97.2 0.0029 6.3E-08 44.4 7.2 71 16-87 161-234 (313)
72 COG2999 GrxB Glutaredoxin 2 [P 93.7 0.24 5.2E-06 32.5 5.0 67 18-91 142-208 (215)
73 PF11801 Tom37_C: Tom37 C-term 93.2 0.4 8.6E-06 31.0 5.5 38 22-59 112-153 (168)
74 KOG1147 Glutamyl-tRNA syntheta 93.1 0.064 1.4E-06 40.7 2.0 61 21-83 91-151 (712)
75 KOG1668 Elongation factor 1 be 77.9 1.5 3.3E-05 29.8 1.6 59 24-91 10-68 (231)
76 PF03791 KNOX2: KNOX2 domain ; 66.5 14 0.00029 19.2 3.2 34 2-35 15-48 (52)
77 PHA02975 hypothetical protein; 44.4 42 0.00091 18.4 2.9 29 1-29 4-33 (69)
78 PHA02650 hypothetical protein; 40.1 52 0.0011 18.7 2.9 29 1-29 4-33 (81)
79 PHA02844 putative transmembran 39.6 53 0.0011 18.4 2.9 29 1-29 4-33 (75)
80 PHA02819 hypothetical protein; 39.5 56 0.0012 18.1 2.9 29 1-29 4-33 (71)
81 PF07862 Nif11: Nitrogen fixat 39.2 32 0.00069 17.1 1.9 23 75-97 4-26 (49)
82 PHA02692 hypothetical protein; 38.2 59 0.0013 18.0 2.9 28 1-28 4-32 (70)
83 PRK15371 effector protein YopJ 36.8 59 0.0013 23.1 3.5 66 17-85 22-87 (287)
84 PF12575 DUF3753: Protein of u 34.1 74 0.0016 17.7 2.9 28 2-29 5-33 (72)
85 PHA03054 IMV membrane protein; 30.7 99 0.0021 17.1 3.0 27 2-28 5-32 (72)
86 TIGR03798 ocin_TIGR03798 bacte 30.5 71 0.0015 16.9 2.5 23 75-97 2-24 (64)
87 cd06891 PX_Vps17p The phosphoi 29.7 42 0.00091 21.2 1.7 18 74-91 111-128 (140)
88 PF09236 AHSP: Alpha-haemoglob 29.1 1.2E+02 0.0026 17.5 3.8 25 7-31 50-74 (89)
89 PF03421 YopJ: YopJ Serine/Thr 27.1 1.1E+02 0.0023 20.1 3.3 62 21-85 2-63 (177)
90 PF00392 GntR: Bacterial regul 26.6 71 0.0015 16.6 2.1 28 25-52 4-32 (64)
91 COG3433 Aryl carrier domain [S 25.5 82 0.0018 17.6 2.1 17 71-87 53-69 (74)
92 PF08134 cIII: cIII protein fa 24.8 1E+02 0.0022 15.1 2.3 16 18-33 25-40 (44)
93 PF09966 DUF2200: Uncharacteri 22.4 80 0.0017 19.0 1.8 29 2-30 7-35 (111)
94 TIGR03060 PS_II_psb29 photosys 21.1 2.3E+02 0.0049 19.3 4.0 24 1-24 76-99 (214)
No 1
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.79 E-value=2.7e-18 Score=106.73 Aligned_cols=104 Identities=18% Similarity=0.323 Sum_probs=86.1
Q ss_pred ChhhHHHHHcCC-HHHHHHHHHHHHHHHHHHHhhhCC----------------CCcccCCCCChhhHHHHhHHHHHHHhh
Q 033674 1 MYDSLRKTWTTK-GEEQEAAKKEFFEVLKTLEGQLGD----------------KPFFGGDNFGYVDLSLIPFYCWFYTYE 63 (114)
Q Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~l~~----------------~~~l~G~~~s~aD~~l~~~l~~~~~~~ 63 (114)
+|+++..++.++ .+..+.....+...|+.+|.+|.+ ++|++|+++|+|||+++|.+.++....
T Consensus 11 ~f~~~~~~~~~~~~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~ 90 (134)
T cd03198 11 IFAKFSAYIKNSNPALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVA 90 (134)
T ss_pred HHHHHHHHHcCCChhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 478888888887 566678888999999999999986 679999999999999999988775421
Q ss_pred -hhcCCCccccCchHHHHHHHHhcChhhhhhcCChhHHHHHH
Q 033674 64 -TCGKFNVEAECPKFIAWVKRCLQRETVAKALPDGKKVFEFV 104 (114)
Q Consensus 64 -~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~ 104 (114)
...++.+.+++|+|.+|++++.++|+++++++..+.+...+
T Consensus 91 ~~~~g~~i~~~~P~L~aw~~ri~aRPsfk~t~~~~~~i~~~~ 132 (134)
T cd03198 91 KKYRNFEIPADLTGLWRYLKNAYQREEFTNTCPADQEIELAY 132 (134)
T ss_pred HhhcCCCccccCHHHHHHHHHHHCCHHHHHHcCCHHHHHHHh
Confidence 12355545789999999999999999999999987666655
No 2
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.78 E-value=3.8e-18 Score=104.73 Aligned_cols=104 Identities=19% Similarity=0.354 Sum_probs=83.5
Q ss_pred ChhhHHHHHcCCHHHHHHHHHHHHHHHHHHHhhhCC-CCcccCCCCChhhHHHHhHHHHHHHh-hhhcCCCccccCchHH
Q 033674 1 MYDSLRKTWTTKGEEQEAAKKEFFEVLKTLEGQLGD-KPFFGGDNFGYVDLSLIPFYCWFYTY-ETCGKFNVEAECPKFI 78 (114)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~-~~~l~G~~~s~aD~~l~~~l~~~~~~-~~~~~~~~~~~~p~l~ 78 (114)
+|++++.++.++++. +...+.+.+.+..||.+|++ ++|++|+++|+||++++|.+.++... ....++...+.+|+|.
T Consensus 14 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~P~l~ 92 (121)
T cd03201 14 IFSTFVGFLKSKDSN-DGTEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSVPESLTSVK 92 (121)
T ss_pred HHHHHHHHHHCCcHH-HHHHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCCcccchHHH
Confidence 477888888887444 55667899999999999985 79999999999999999988776542 2222443347899999
Q ss_pred HHHHHHhcChhhhhhcCChhHHHHHHH
Q 033674 79 AWVKRCLQRETVAKALPDGKKVFEFVS 105 (114)
Q Consensus 79 ~~~~~~~~~p~~~~~~~~~~~~~~~~~ 105 (114)
+|+++|.++|+++++.+..+.+...++
T Consensus 93 ~w~~rl~~rps~~~t~~~~~~~~~~~~ 119 (121)
T cd03201 93 SYMKALFSRESFVKTKAEKEDVIAGWA 119 (121)
T ss_pred HHHHHHHCCchhhhcCCCHHHHHHHhc
Confidence 999999999999999998777665554
No 3
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.77 E-value=4e-18 Score=104.80 Aligned_cols=104 Identities=24% Similarity=0.378 Sum_probs=85.5
Q ss_pred hhhHHHHHcCCHHHHHHHHHHHHHHHHHHHhhhCC--CCcccCCCCChhhHHHHhHHHHHHHhhhhcCC-CccccCchHH
Q 033674 2 YDSLRKTWTTKGEEQEAAKKEFFEVLKTLEGQLGD--KPFFGGDNFGYVDLSLIPFYCWFYTYETCGKF-NVEAECPKFI 78 (114)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~--~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~-~~~~~~p~l~ 78 (114)
++++++++.+ ++..+...+.+.+.++.+|+.|++ ++|++|+++|+||++++|++.++.......+. ...+.+|+|.
T Consensus 17 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~p~l~ 95 (124)
T cd03184 17 VSAFYKLLGA-PSDREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWFERLEALKLLLGYEFPLDRFPKLK 95 (124)
T ss_pred hHHHHHHHhc-cccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHHHHHHHHHhhccccCCcccChHHH
Confidence 4566677766 556678888999999999999975 79999999999999999999887654322221 1147899999
Q ss_pred HHHHHHhcChhhhhhcCChhHHHHHHHH
Q 033674 79 AWVKRCLQRETVAKALPDGKKVFEFVSV 106 (114)
Q Consensus 79 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 106 (114)
+|+++|.++|+++.++++.+...++++.
T Consensus 96 ~w~~r~~~~p~v~~~~~~~~~~~~~~~~ 123 (124)
T cd03184 96 KWMDAMKEDPAVQAFYTDTEIHAEFLKS 123 (124)
T ss_pred HHHHHhccChHHHHHhCCHHHHHHHHhc
Confidence 9999999999999999999999888864
No 4
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.77 E-value=1.8e-17 Score=101.69 Aligned_cols=103 Identities=48% Similarity=0.837 Sum_probs=82.2
Q ss_pred hHHHHHcCCHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCc--cccCchHHHHH
Q 033674 4 SLRKTWTTKGEEQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNV--EAECPKFIAWV 81 (114)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~--~~~~p~l~~~~ 81 (114)
++..++...++..+....++.+.++.+|++|++++|++|+++|+||+++++.+.++.......+.+. .+.+|++.+|+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~ 100 (126)
T cd03185 21 AGRKVLAAKGEEREKAKEEALEALKVLEEELGGKPFFGGDTIGYVDIALGSFLGWFRAYEEVGGVKLLDEEKTPLLAAWA 100 (126)
T ss_pred HHHHHHccchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHcCccccCcccCchHHHHH
Confidence 3333444444555677888999999999999988999999999999999999998865433334332 36799999999
Q ss_pred HHHhcChhhhhhcCChhHHHHHHHH
Q 033674 82 KRCLQRETVAKALPDGKKVFEFVSV 106 (114)
Q Consensus 82 ~~~~~~p~~~~~~~~~~~~~~~~~~ 106 (114)
++|.++|+++++.+..+...++++.
T Consensus 101 ~~~~~~p~~~~~~~~~~~~~~~~~~ 125 (126)
T cd03185 101 ERFLELEAVKEVLPDRDKLVEFAKA 125 (126)
T ss_pred HHHHhccHHHHhCCCHHHHHHHHHh
Confidence 9999999999999998887776653
No 5
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.74 E-value=3.1e-17 Score=103.18 Aligned_cols=106 Identities=20% Similarity=0.229 Sum_probs=84.4
Q ss_pred hHHHHHcCC-HHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHh-hhhc--CCCccccCchHHH
Q 033674 4 SLRKTWTTK-GEEQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTY-ETCG--KFNVEAECPKFIA 79 (114)
Q Consensus 4 ~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~-~~~~--~~~~~~~~p~l~~ 79 (114)
.++.++... ++..+...+.+.+.++.+|++|++++|++|+++|+||+++++.+.++... .... +....+.+|+|.+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~~~~P~L~~ 101 (142)
T cd03190 22 GVYKAGFATTQEAYDEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLFTTLIRFDAVYVQHFKCNLKRIRDYPNLWN 101 (142)
T ss_pred HHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHHHHHHHHHHHhhhhcccccchhhhCchHHH
Confidence 344443333 66677888899999999999999889999999999999999998765331 1111 1122368999999
Q ss_pred HHHHHhcChhhhhhcCChhHHHHHHHHHHH
Q 033674 80 WVKRCLQRETVAKALPDGKKVFEFVSVMRT 109 (114)
Q Consensus 80 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 109 (114)
|+++|.++|+++++....+..+.|++++++
T Consensus 102 w~~r~~~~P~~k~~~~~~~~~~~~~~~~~~ 131 (142)
T cd03190 102 YLRRLYQNPGVAETTNFDHIKQHYYGSHFP 131 (142)
T ss_pred HHHHHhcCchHhhhcCHHHHHHHHHhhcCC
Confidence 999999999999999999999999998864
No 6
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.70 E-value=4.5e-16 Score=105.19 Aligned_cols=106 Identities=19% Similarity=0.315 Sum_probs=85.8
Q ss_pred hhHHHHHcCC-HHHHHHHHHHHHHHHHHHHhhhC------------------CCCcccCCCCChhhHHHHhHHHHHHHh-
Q 033674 3 DSLRKTWTTK-GEEQEAAKKEFFEVLKTLEGQLG------------------DKPFFGGDNFGYVDLSLIPFYCWFYTY- 62 (114)
Q Consensus 3 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~l~------------------~~~~l~G~~~s~aD~~l~~~l~~~~~~- 62 (114)
+.+..++... +...+...+++.+.++.||++|. +++|++|+++|+|||+++|.+.++...
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~l~~l~~~~ 186 (236)
T TIGR00862 107 AKFSAYIKNSNPEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPKLHIVKVVA 186 (236)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccCCCcccCCccchhhHHHHHHHHHHHHHH
Confidence 3444444343 34455556678999999999986 468999999999999999999988764
Q ss_pred hhhcCCCccccCchHHHHHHHHhcChhhhhhcCChhHHHHHHHHHH
Q 033674 63 ETCGKFNVEAECPKFIAWVKRCLQRETVAKALPDGKKVFEFVSVMR 108 (114)
Q Consensus 63 ~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 108 (114)
+...++++.+.+|+|.+|++++.++|+|+.+++..+.+...|..+.
T Consensus 187 ~~~~~~~i~~~~p~l~~w~~~~~~~~sf~~t~p~~~~i~~~~~~~~ 232 (236)
T TIGR00862 187 KKYRNFDIPAEFTGVWRYLSNAYAREEFTNTCPDDKEIELAYADVA 232 (236)
T ss_pred HHHhCcCccccCchHHHHHHHHhccchHHhhCCChHHHHHHHHHHh
Confidence 3345777679999999999999999999999999999888888774
No 7
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.68 E-value=7.4e-16 Score=92.20 Aligned_cols=84 Identities=23% Similarity=0.380 Sum_probs=68.4
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHh
Q 033674 6 RKTWTTKGEEQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCL 85 (114)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~ 85 (114)
..++.+.++..+...+.+.+.++.+|++|++++|++|+++|+||+++++.+.++.. .+.++...+|++.+|.+++.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~----~~~~~~~~~p~l~~w~~~~~ 98 (107)
T cd03186 23 DTIEKGRKKEAEKARKELRESLLALAPVFAHKPYFMSEEFSLVDCALAPLLWRLPA----LGIELPKQAKPLKDYMERVF 98 (107)
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHHHHHHHHHH----cCCCCcccchHHHHHHHHHH
Confidence 34444445556778888999999999999999999999999999999999865542 34444457999999999999
Q ss_pred cChhhhhh
Q 033674 86 QRETVAKA 93 (114)
Q Consensus 86 ~~p~~~~~ 93 (114)
++|+++++
T Consensus 99 ~rpa~~~~ 106 (107)
T cd03186 99 ARDSFQKS 106 (107)
T ss_pred CCHHHHHh
Confidence 99999875
No 8
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.64 E-value=1.6e-15 Score=92.91 Aligned_cols=82 Identities=24% Similarity=0.521 Sum_probs=66.5
Q ss_pred HHHHHHHHHHhhhC---CCCcccCCCCChhhHHHHhHHHHHHHh-hhhcCCCccccCchHHHHHHHHhcChhhhhhcCCh
Q 033674 22 EFFEVLKTLEGQLG---DKPFFGGDNFGYVDLSLIPFYCWFYTY-ETCGKFNVEAECPKFIAWVKRCLQRETVAKALPDG 97 (114)
Q Consensus 22 ~~~~~l~~le~~l~---~~~~l~G~~~s~aD~~l~~~l~~~~~~-~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 97 (114)
.+.+.++.||+.|+ +++|++| ++|+||++++|.+.++..+ ....+.++.+++|+|.+|+++|.++|+++++.++.
T Consensus 34 ~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l~~~~~~~~~~~~~~~~~~~~~~~P~l~~W~~~~~~rp~~~~~~~~~ 112 (120)
T cd03203 34 EAAAALDYIENALSKFDDGPFFLG-QFSLVDIAYVPFIERFQIFLSELFNYDITEGRPNLAAWIEEMNKIEAYTQTKQDP 112 (120)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHHHHHHHHHHHHHHHhcCccccccCcHHHHHHHHHhcchHHHhHcCCH
Confidence 34667777887776 4789999 9999999999999876542 12345555568999999999999999999999998
Q ss_pred hHHHHHH
Q 033674 98 KKVFEFV 104 (114)
Q Consensus 98 ~~~~~~~ 104 (114)
+++.+++
T Consensus 113 ~~~~~~~ 119 (120)
T cd03203 113 QELLDLA 119 (120)
T ss_pred HHHHhhh
Confidence 8887765
No 9
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.64 E-value=3.1e-15 Score=91.56 Aligned_cols=91 Identities=18% Similarity=0.298 Sum_probs=72.5
Q ss_pred hHHHHHcCC--HHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHH
Q 033674 4 SLRKTWTTK--GEEQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWV 81 (114)
Q Consensus 4 ~~~~~~~~~--~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~ 81 (114)
.+.+++... +...+...+.+.+.++.+|++|++++|++|+++|+||+++++.+.++... +....+.+|+|.+|+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~~~~~~~~~----~~~~~~~~P~l~~~~ 94 (121)
T cd03209 19 GLARICYSPDFEKLKPDYLAKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYEALDQHRIF----EPDCLDAFPNLKDFL 94 (121)
T ss_pred HHHHhhcCcchHHHHHHHHHHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHHHHHHHHHh----CccccccChHHHHHH
Confidence 344444432 44456677889999999999999889999999999999999999888653 112247899999999
Q ss_pred HHHhcChhhhhhcCChh
Q 033674 82 KRCLQRETVAKALPDGK 98 (114)
Q Consensus 82 ~~~~~~p~~~~~~~~~~ 98 (114)
+++.++|.++++++...
T Consensus 95 ~rv~~~p~vk~~~~~~~ 111 (121)
T cd03209 95 ERFEALPKISAYMKSDR 111 (121)
T ss_pred HHHHHCHHHHHHHhccc
Confidence 99999999999987643
No 10
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.64 E-value=2.8e-15 Score=89.13 Aligned_cols=78 Identities=23% Similarity=0.342 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhhhh
Q 033674 13 GEEQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAK 92 (114)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~ 92 (114)
++..+...+++.+.++.+|++|++++|++|+++|+||+++++.+.|+... + ..+.+|+|.+|++++.++|.+++
T Consensus 25 ~~~~~~~~~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~----~--~~~~~p~l~~w~~~~~~~p~~~~ 98 (103)
T cd03207 25 EPARMAGFGSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGLQF----G--LLPERPAFDAYIARITDRPAFQR 98 (103)
T ss_pred cchhhhhhhhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHHHc----C--CCCCChHHHHHHHHHHcCHHHHH
Confidence 34456677889999999999999899999999999999999999887642 2 24789999999999999999998
Q ss_pred hcCC
Q 033674 93 ALPD 96 (114)
Q Consensus 93 ~~~~ 96 (114)
+.+.
T Consensus 99 ~~~~ 102 (103)
T cd03207 99 AAAI 102 (103)
T ss_pred Hhcc
Confidence 7653
No 11
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.62 E-value=4.4e-15 Score=86.89 Aligned_cols=72 Identities=26% Similarity=0.490 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCcc-ccCchHHHHHHHHhcCh
Q 033674 13 GEEQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVE-AECPKFIAWVKRCLQRE 88 (114)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~-~~~p~l~~~~~~~~~~p 88 (114)
++.++....++.+.++.+|+.+++++|++|+++|+||+++++.+.++... +.... +.+|+|.+|.++|.++|
T Consensus 23 ~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~----~~~~~~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 23 EEMVEEARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERL----GPDFLFEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHH----TTTTTHTTSHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHh----CCCcccccCHHHHHHHHHHHcCC
Confidence 34567778889999999999999999999999999999999999988764 22333 89999999999999998
No 12
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.62 E-value=1.8e-14 Score=96.29 Aligned_cols=107 Identities=43% Similarity=0.669 Sum_probs=88.1
Q ss_pred HHHHcCC-HHHHHHHHHHHHHHHHHHHhhhC-CCCcccCCCCChhhHHHHhHHHHHHHhhhhcC---CCccccCchHHHH
Q 033674 6 RKTWTTK-GEEQEAAKKEFFEVLKTLEGQLG-DKPFFGGDNFGYVDLSLIPFYCWFYTYETCGK---FNVEAECPKFIAW 80 (114)
Q Consensus 6 ~~~~~~~-~~~~~~~~~~~~~~l~~le~~l~-~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~---~~~~~~~p~l~~~ 80 (114)
..+...+ ++.++...+++.+.+..+|+.|. +.+|++|++++++|++++|.+.+........+ ....+.+|+|.+|
T Consensus 116 ~~~~~~~~~e~~~~~~~e~~e~l~~lE~el~k~k~~fgG~~~G~vDi~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W 195 (231)
T KOG0406|consen 116 RFVVAAKGGEEQEAAKEELREALKVLEEELGKGKDFFGGETIGFVDIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKW 195 (231)
T ss_pred HHHHhhcCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCHhhhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHH
Confidence 3344434 57788899999999999999998 77999999999999999988875554432222 2225789999999
Q ss_pred HHHHhcChhhhhhcCChhHHHHHHHHHHHhhc
Q 033674 81 VKRCLQRETVAKALPDGKKVFEFVSVMRTNLG 112 (114)
Q Consensus 81 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 112 (114)
.++|.++|++++++++.+..++|++.+++...
T Consensus 196 ~~~~~~~~~V~~~~p~~e~~~e~~~~~~~~~~ 227 (231)
T KOG0406|consen 196 IKRMKEDEAVKAVLPDSEKVVEFMKKYRQGSP 227 (231)
T ss_pred HHHHhcChhHHhhcCCHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999988643
No 13
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.61 E-value=4.4e-15 Score=91.52 Aligned_cols=91 Identities=20% Similarity=0.239 Sum_probs=72.1
Q ss_pred hhHHHHHcCC-HHHHHHHHHHHHHHHHHHHhhhCC---CCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHH
Q 033674 3 DSLRKTWTTK-GEEQEAAKKEFFEVLKTLEGQLGD---KPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFI 78 (114)
Q Consensus 3 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~l~~---~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~ 78 (114)
+.+.+++... +...+...+.+.+.+..+|++|++ ++|++|+++|+||+++++.+.|+... .+ ...+.+|+|.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~~---~~-~~~~~~P~l~ 94 (126)
T cd03210 19 LKYVRMIYQNYEAGKDDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLVL---AP-GCLDAFPLLK 94 (126)
T ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHHh---Ch-HhhhcChHHH
Confidence 3445555555 445566777899999999999974 58999999999999999999887642 11 1247899999
Q ss_pred HHHHHHhcChhhhhhcCCh
Q 033674 79 AWVKRCLQRETVAKALPDG 97 (114)
Q Consensus 79 ~~~~~~~~~p~~~~~~~~~ 97 (114)
+|+++|.++|.+++++...
T Consensus 95 ~~~~rv~~~p~v~~~~~~~ 113 (126)
T cd03210 95 AFVERLSARPKLKAYLESD 113 (126)
T ss_pred HHHHHHHhCcHHHHHHhCc
Confidence 9999999999999987654
No 14
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.59 E-value=1e-14 Score=87.73 Aligned_cols=75 Identities=27% Similarity=0.422 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhhhhhc
Q 033674 15 EQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKAL 94 (114)
Q Consensus 15 ~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 94 (114)
..+...+.+.+.++.+|+++++++|++|+++|+||+++++.+.++.. .+.+ .+.+|++.+|+++|.++|.+++++
T Consensus 40 ~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~~~~~~~~----~~~~-~~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 40 VKAAARERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFVVLRWAPG----VGLD-LSDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHHHHHHHhh----cCCC-hhhChHHHHHHHHHHhCHHhHhhC
Confidence 34567788999999999999988999999999999999999887653 2333 368999999999999999998753
No 15
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.59 E-value=1.2e-14 Score=88.41 Aligned_cols=77 Identities=22% Similarity=0.403 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhhhhh
Q 033674 15 EQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKA 93 (114)
Q Consensus 15 ~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~ 93 (114)
..+...+.+.+.++.+|++|++++|++|+++|+||+++++.+.++.... ..+.. .+.+|+|.+|++++.++|+++++
T Consensus 38 ~~~~~~~~i~~~l~~le~~L~~~~yl~Gd~~tlADi~l~~~l~~~~~~~-~~~~~-~~~~P~L~~w~~r~~~rpa~~~~ 114 (115)
T cd03196 38 SEEEYRQQAEAFLKDLEARLQQHSYLLGDKPSLADWAIFPFVRQFAHVD-PKWFD-QSPYPRLRRWLNGFLASPLFSKI 114 (115)
T ss_pred cHHHHHHHHHHHHHHHHHHHccCCccCCCCccHHHHHHHHHHHHHHHhh-hcccC-cccCHHHHHHHHHHHcChHHHhh
Confidence 4667788899999999999998899999999999999999887654321 11222 37899999999999999999875
No 16
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.59 E-value=9.9e-15 Score=88.38 Aligned_cols=79 Identities=23% Similarity=0.377 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhhhh
Q 033674 13 GEEQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAK 92 (114)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~ 92 (114)
++..+...+++.+.++.+|++|++++|++|+++|+||+++++++.+.... ......+.+|+|.+|.+++.++|++++
T Consensus 40 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~---~~~~~~~~~p~l~~~~~~~~~~p~~~~ 116 (118)
T cd03187 40 EAVVEENEEKLKKVLDVYEARLSKSKYLAGDSFTLADLSHLPYLQYLMAT---PFAKLFDSRPHVKAWWEDISARPAWKK 116 (118)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccCcccCCCCccHHHHHHHHHHHHHHHc---cchhhhhcCchHHHHHHHHHhCHHHHh
Confidence 44556678889999999999999889999999999999999998876531 111124689999999999999999987
Q ss_pred hc
Q 033674 93 AL 94 (114)
Q Consensus 93 ~~ 94 (114)
++
T Consensus 117 ~~ 118 (118)
T cd03187 117 VL 118 (118)
T ss_pred hC
Confidence 63
No 17
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.57 E-value=2.4e-14 Score=89.56 Aligned_cols=72 Identities=18% Similarity=0.205 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHhhhC--CCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhhhhhcCC
Q 033674 21 KEFFEVLKTLEGQLG--DKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKALPD 96 (114)
Q Consensus 21 ~~~~~~l~~le~~l~--~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 96 (114)
+.+.+.++.+|++|+ +++|++|+++|+||+++++.+.++... .....+.+|+|.+|++++.++|++++++..
T Consensus 42 ~~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~~~~----~~~~l~~~P~l~~~~~rv~~~P~vk~~~~~ 115 (137)
T cd03208 42 KAKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAILMVEEL----DPSLLSDFPLLQAFKTRISNLPTIKKFLQP 115 (137)
T ss_pred HHHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHHHHHHh----chhhhccChHHHHHHHHHHcCHHHHHHHhc
Confidence 456799999999998 678999999999999999999887642 112247899999999999999999998764
No 18
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.56 E-value=5.7e-14 Score=93.39 Aligned_cols=83 Identities=22% Similarity=0.447 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCcc-ccCchHHHHHHHHhcChhhh
Q 033674 13 GEEQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVE-AECPKFIAWVKRCLQRETVA 91 (114)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~-~~~p~l~~~~~~~~~~p~~~ 91 (114)
+...+...+.+...++.+|++|++++|++|+++|+||+++++.+.++.. .+.++. +.+|+|.+|++++.++|+++
T Consensus 122 ~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~~~~~~~----~~~~~~~~~~p~l~~w~~~~~~rp~~~ 197 (211)
T PRK09481 122 ASEADAARKQLREELLAIAPVFGEKPYFMSEEFSLVDCYLAPLLWRLPV----LGIELSGPGAKELKGYMTRVFERDSFL 197 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCcccCCCccHHHHHHHHHHHHHHh----cCCCCCCCCChhHHHHHHHHhccHHHH
Confidence 4455667788999999999999989999999999999999999877653 244442 57999999999999999999
Q ss_pred hhcCChhH
Q 033674 92 KALPDGKK 99 (114)
Q Consensus 92 ~~~~~~~~ 99 (114)
+++.+.+.
T Consensus 198 ~~~~~~~~ 205 (211)
T PRK09481 198 ASLTEAER 205 (211)
T ss_pred HHcCHHHH
Confidence 99876544
No 19
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.56 E-value=3.8e-14 Score=86.45 Aligned_cols=75 Identities=20% Similarity=0.254 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHhhhC--CCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhhhhhc
Q 033674 17 EAAKKEFFEVLKTLEGQLG--DKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKAL 94 (114)
Q Consensus 17 ~~~~~~~~~~l~~le~~l~--~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 94 (114)
+...+.+.+.++.+|++|+ +++|++|+++|+||+++++.+.++... +.++ +.+|+|.+|++++.++|.++++.
T Consensus 43 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~~~~~~~~----~~~~-~~~p~l~~w~~~~~~~p~~~~~~ 117 (121)
T cd03191 43 AWYRHWIARGFAALEKLLAQTAGKFCFGDEPTLADICLVPQVYNARRF----GVDL-SPYPTIARINEACLELPAFQAAH 117 (121)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHHHHHHHHHHh----CCCc-ccCcHHHHHHHHHHhChhHHHhC
Confidence 4455678999999999997 457999999999999999998876542 3443 78999999999999999999987
Q ss_pred CC
Q 033674 95 PD 96 (114)
Q Consensus 95 ~~ 96 (114)
+.
T Consensus 118 ~~ 119 (121)
T cd03191 118 PD 119 (121)
T ss_pred cC
Confidence 64
No 20
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.56 E-value=2.3e-14 Score=87.19 Aligned_cols=78 Identities=23% Similarity=0.284 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhhhhh
Q 033674 14 EEQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKA 93 (114)
Q Consensus 14 ~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~ 93 (114)
...+...+++.+.++.+|+.|++++|++|+++|+||+++++++.++... .+.+ ...+|+|.+|+++|.++|++++.
T Consensus 34 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~~~~~~~~~---~~~~-~~~~p~l~~w~~~~~~~p~~~~~ 109 (118)
T cd03177 34 EPPEEKLDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVATVSTLEAL---LPLD-LSKYPNVRAWLERLKALPPYEEA 109 (118)
T ss_pred CCCHHHHHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHHHHHHHHHh---cCCC-hhhCchHHHHHHHHHcccchHHH
Confidence 3455677889999999999998889999999999999999999887641 2333 36799999999999999999986
Q ss_pred cC
Q 033674 94 LP 95 (114)
Q Consensus 94 ~~ 95 (114)
.+
T Consensus 110 ~~ 111 (118)
T cd03177 110 NG 111 (118)
T ss_pred HH
Confidence 53
No 21
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.56 E-value=2.5e-14 Score=79.29 Aligned_cols=68 Identities=29% Similarity=0.518 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHH
Q 033674 14 EEQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKR 83 (114)
Q Consensus 14 ~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~ 83 (114)
...+...+++.+.++.+|.+|.+++|++|+++|++|+++++++.++..... +.++.+.+|+|.+|++|
T Consensus 2 ~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~--~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 2 AAVERARAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGP--DFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTH--TCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCc--CcCccccCHHHHHHHhC
Confidence 456788999999999999999999999999999999999999999887522 23445899999999986
No 22
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.54 E-value=3.8e-14 Score=85.31 Aligned_cols=78 Identities=18% Similarity=0.362 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhhhh
Q 033674 13 GEEQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAK 92 (114)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~ 92 (114)
+...+...+.+.+.++.+|..|++++|++|+++|+||+++++.+.+.... +.+....+|++.+|.++|.++|.+++
T Consensus 35 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~----~~~~~~~~p~l~~w~~~~~~~p~~~~ 110 (113)
T cd03178 35 PYAIERYTNEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFPWVRRLEWI----GIDDLDDFPNVKRWLDRIAARPAVQR 110 (113)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHHHHHHHHhc----cccchhhchHHHHHHHHHhhCHHHHH
Confidence 44556778889999999999999889999999999999999998887543 23334789999999999999999998
Q ss_pred hc
Q 033674 93 AL 94 (114)
Q Consensus 93 ~~ 94 (114)
+.
T Consensus 111 ~~ 112 (113)
T cd03178 111 GL 112 (113)
T ss_pred hc
Confidence 64
No 23
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.53 E-value=6.5e-14 Score=84.78 Aligned_cols=74 Identities=24% Similarity=0.341 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhh
Q 033674 13 GEEQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETV 90 (114)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 90 (114)
++..+....++.++++.+|++|++++|++|+++|++|+++++.+.++.. .+.++...+|+|.+|++++.++|++
T Consensus 44 ~~~~~~~~~~l~~~l~~le~~L~~~~~l~gd~~t~aDi~l~~~~~~~~~----~~~~~~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 44 PEWGERSKARAADFLAYLDTRLAGSPYVAGDRFTIADITAFVGLDFAKV----VKLRVPEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHhHHHHh----cCCCCccccHHHHHHHHHHHhccCC
Confidence 4446777888999999999999988999999999999999999988764 2444446899999999999999974
No 24
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.53 E-value=1e-13 Score=85.08 Aligned_cols=78 Identities=31% Similarity=0.395 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhh-hCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhc--Chh
Q 033674 13 GEEQEAAKKEFFEVLKTLEGQ-LGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQ--RET 89 (114)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~-l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~--~p~ 89 (114)
++..+...+.+.+.++.+|++ +++++|++|+++|+||+++++.+.+... .+.+..+.+|+|.+|+++|.+ +|+
T Consensus 40 ~~~~~~~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~~~~~~~~~----~~~~~~~~~p~l~~w~~~~~~~~~p~ 115 (126)
T cd03183 40 PEKVKKAEENLEESLDLLENYFLKDKPFLAGDEISIADLSAVCEIMQPEA----AGYDVFEGRPKLAAWRKRVKEAGNPL 115 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHh----cCCcccccCchHHHHHHHHHHhcchh
Confidence 455667788899999999997 4557899999999999999998877653 244435789999999999999 999
Q ss_pred hhhhc
Q 033674 90 VAKAL 94 (114)
Q Consensus 90 ~~~~~ 94 (114)
++++.
T Consensus 116 ~~~~~ 120 (126)
T cd03183 116 FDEAH 120 (126)
T ss_pred HHHHH
Confidence 98854
No 25
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.52 E-value=9.5e-14 Score=83.90 Aligned_cols=74 Identities=26% Similarity=0.315 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCC----------CcccCCCCChhhHHHHhHHHHHHHhhhhcCCCc----cccCchHH
Q 033674 13 GEEQEAAKKEFFEVLKTLEGQLGDK----------PFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNV----EAECPKFI 78 (114)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~l~~~----------~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~----~~~~p~l~ 78 (114)
.+..+....++.+.++.+|++|.++ +|++|+++|+||+++++.+.|+... +.+. ...+|+|.
T Consensus 24 ~~~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~----~~~~~~~~~~~~P~l~ 99 (111)
T cd03204 24 VEYLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFL----GLSRRYWGNGKRPNLE 99 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHc----CccccccccccChHHH
Confidence 4556778889999999999999754 4999999999999999999987653 2222 25799999
Q ss_pred HHHHHHhcChhh
Q 033674 79 AWVKRCLQRETV 90 (114)
Q Consensus 79 ~~~~~~~~~p~~ 90 (114)
+|+++|.++|++
T Consensus 100 ~w~~rv~aRpsf 111 (111)
T cd03204 100 AYFERVLQRESF 111 (111)
T ss_pred HHHHHHHcCCCC
Confidence 999999999975
No 26
>PLN02378 glutathione S-transferase DHAR1
Probab=99.52 E-value=1.3e-13 Score=91.88 Aligned_cols=88 Identities=23% Similarity=0.341 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHhhhC--CCCcccCCCCChhhHHHHhHHHHHHHhh-hhcCCCccccCchHHHHHHHHhcChhhhhhc
Q 033674 18 AAKKEFFEVLKTLEGQLG--DKPFFGGDNFGYVDLSLIPFYCWFYTYE-TCGKFNVEAECPKFIAWVKRCLQRETVAKAL 94 (114)
Q Consensus 18 ~~~~~~~~~l~~le~~l~--~~~~l~G~~~s~aD~~l~~~l~~~~~~~-~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 94 (114)
...+.+.+.++.+|++|+ +++|++|+++|+||++++|.+.++.... ...+.+..+.+|+|.+|+++|.++|++++++
T Consensus 118 ~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~rpa~~~~~ 197 (213)
T PLN02378 118 GSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVALGHFKSWSVPESFPHVHNYMKTLFSLDSFEKTK 197 (213)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHHHHHhcCCCchhHhHHHHHHHHHHhcCCCeeccc
Confidence 344677889999999997 4689999999999999999988765421 1223333478999999999999999999999
Q ss_pred CChhHHHHHHH
Q 033674 95 PDGKKVFEFVS 105 (114)
Q Consensus 95 ~~~~~~~~~~~ 105 (114)
+........+.
T Consensus 198 ~~~~~~~~~~~ 208 (213)
T PLN02378 198 TEEKYVISGWA 208 (213)
T ss_pred CChHHHHHHHH
Confidence 88766433333
No 27
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.52 E-value=8.4e-14 Score=91.59 Aligned_cols=76 Identities=22% Similarity=0.399 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhhhhhcC
Q 033674 16 QEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKALP 95 (114)
Q Consensus 16 ~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 95 (114)
.+...+.+.+.++.+|++|++++|++|+++|+||+++++++.+... .+.+ .+.+|+|.+|++++.++|.+++++.
T Consensus 122 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~----~~~~-~~~~p~l~~w~~~~~~~p~~k~~~~ 196 (201)
T PRK10542 122 KPTVRAQLEKKFQYVDEALADEQWICGQRFTIADAYLFTVLRWAYA----VKLN-LEGLEHIAAYMQRVAERPAVAAALK 196 (201)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeeeCCCCcHHhHHHHHHHHHhhc----cCCC-cccchHHHHHHHHHHcCHHHHHHHH
Confidence 3556678999999999999988999999999999999999887754 2334 3789999999999999999999865
Q ss_pred C
Q 033674 96 D 96 (114)
Q Consensus 96 ~ 96 (114)
.
T Consensus 197 ~ 197 (201)
T PRK10542 197 A 197 (201)
T ss_pred H
Confidence 4
No 28
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.51 E-value=2.1e-13 Score=93.77 Aligned_cols=87 Identities=17% Similarity=0.264 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHhhhCC-CCcccCCCCChhhHHHHhHHHHHHHh-hhhcCCCccccCchHHHHHHHHhcChhhhhhcCCh
Q 033674 20 KKEFFEVLKTLEGQLGD-KPFFGGDNFGYVDLSLIPFYCWFYTY-ETCGKFNVEAECPKFIAWVKRCLQRETVAKALPDG 97 (114)
Q Consensus 20 ~~~~~~~l~~le~~l~~-~~~l~G~~~s~aD~~l~~~l~~~~~~-~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 97 (114)
.+++.+.++.+|++|.+ ++|++|+++|+||++++|.+.++... ....++++.+.+|+|.+|++++.++|+++.+.+..
T Consensus 173 ~~~l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~l~p~L~~l~~~~~~~~~~~i~~~~P~L~~w~~ri~~rps~~~~~~~~ 252 (265)
T PLN02817 173 EQALLDELTSFDDYIKENGPFINGEKISAADLSLGPKLYHLEIALGHYKNWSVPDSLPFVKSYMKNIFSMESFVKTRALP 252 (265)
T ss_pred HHHHHHHHHHHHHHHhcCCCeeCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHhcchhHhhcCCCH
Confidence 35677889999999974 68999999999999999999877542 11234444578999999999999999999999987
Q ss_pred hHHHHHHHH
Q 033674 98 KKVFEFVSV 106 (114)
Q Consensus 98 ~~~~~~~~~ 106 (114)
+.+...|..
T Consensus 253 ~~~~~~~~~ 261 (265)
T PLN02817 253 EDVIAGWRP 261 (265)
T ss_pred HHHHHHhHh
Confidence 766655543
No 29
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.51 E-value=8e-14 Score=85.09 Aligned_cols=83 Identities=19% Similarity=0.273 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhhhh
Q 033674 13 GEEQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAK 92 (114)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~ 92 (114)
....+...+++.+.++.+|+.|+.++|++|+++|+||+++++.+.+.... ..+..+.+.+|++.+|.+++.++|.+++
T Consensus 35 ~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~~~~~~~~--~~~~~~~~~~p~l~~w~~~~~~~p~~~~ 112 (123)
T cd03181 35 KKSVEAALEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGALLLGFTY--VFDKEWRAKYPNVTRWFNTVVNQPIFKA 112 (123)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHHHHHHHHH--HcCHHHHHhChHHHHHHHHHHcCHHHHH
Confidence 34566788889999999999999889999999999999999999886432 1121223679999999999999999999
Q ss_pred hcCCh
Q 033674 93 ALPDG 97 (114)
Q Consensus 93 ~~~~~ 97 (114)
++.+.
T Consensus 113 ~~~~~ 117 (123)
T cd03181 113 VFGEV 117 (123)
T ss_pred HcCCC
Confidence 87753
No 30
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.50 E-value=1.9e-13 Score=81.68 Aligned_cols=72 Identities=19% Similarity=0.380 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhh
Q 033674 14 EEQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETV 90 (114)
Q Consensus 14 ~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 90 (114)
...+...+++.+.++.+|++|++++|++|+++|+||+++++++..... .+.. ...+|+|.+|.++|.++|++
T Consensus 39 ~~~~~~~~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~~~~~~~~----~~~~-~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 39 AAIAASLAAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGCSAYRWFE----LPIE-RPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHHHHHH----cccc-cccCchHHHHHHHHHhCCCC
Confidence 344567788999999999999988999999999999999998753322 1223 47899999999999999975
No 31
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.49 E-value=2.2e-13 Score=80.59 Aligned_cols=71 Identities=20% Similarity=0.378 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhh
Q 033674 15 EQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETV 90 (114)
Q Consensus 15 ~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 90 (114)
..++..+++.+.++.+|++|++++|++|+++|+||+++++++.+... .+.. .+.+|+|.+|.+++.++|++
T Consensus 30 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~----~~~~-~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 30 DKETAIARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALAPE----GGVD-LEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHHhc----cCCC-hhhCcHHHHHHHHHHhCcCC
Confidence 45677889999999999999999999999999999999998876433 2223 47899999999999999974
No 32
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.48 E-value=3.3e-13 Score=81.94 Aligned_cols=69 Identities=20% Similarity=0.171 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcCh
Q 033674 15 EQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRE 88 (114)
Q Consensus 15 ~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p 88 (114)
..+....++.+.++.+|++|++++|++|+++|+||+++++.+.|+... +.. .+.+|+|.+|++++.++|
T Consensus 51 ~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~----~~~-~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 51 LAGFINPELKKHLDFLEDRLAKKGYFVGDKLTAADIMMSFPLEAALAR----GPL-LEKYPNIAAYLERIEARP 119 (119)
T ss_pred HHHHHhHHHHHHHHHHHHHHccCCCCCCCCCCHHHHHHHHHHHHHHHc----Ccc-cccCchHHHHHHHHhcCC
Confidence 344556789999999999999999999999999999999999887542 223 478999999999999987
No 33
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.46 E-value=3.4e-13 Score=89.78 Aligned_cols=78 Identities=22% Similarity=0.390 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhhhhh
Q 033674 14 EEQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKA 93 (114)
Q Consensus 14 ~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~ 93 (114)
...+....++.+.+..+|.+|++++|++|+++|+||+++++.+..... .+.+ .+.+|+|.+|+++|.++|+++++
T Consensus 128 ~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~----~~~~-~~~~P~l~~w~~r~~~rp~~~~~ 202 (215)
T PRK13972 128 YAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTR----QRID-LAMYPAVKNWHERIRSRPATGQA 202 (215)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCccccCCCCCHHHHHHHHHHHHHhh----cCCc-chhCHHHHHHHHHHHhCHHHHHH
Confidence 334556677889999999999988999999999999999887643222 1334 37899999999999999999987
Q ss_pred cCC
Q 033674 94 LPD 96 (114)
Q Consensus 94 ~~~ 96 (114)
+..
T Consensus 203 ~~~ 205 (215)
T PRK13972 203 LLK 205 (215)
T ss_pred HHH
Confidence 654
No 34
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.46 E-value=5.7e-13 Score=88.16 Aligned_cols=77 Identities=17% Similarity=0.157 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHHHHhhhCC--CCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhhhhh
Q 033674 16 QEAAKKEFFEVLKTLEGQLGD--KPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKA 93 (114)
Q Consensus 16 ~~~~~~~~~~~l~~le~~l~~--~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~ 93 (114)
.+...+.+.+.++.+|++|++ ++|++|+++|+||+++++++.++..+ +.. .+.||+|.+|+++|.++|.++++
T Consensus 127 ~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~ADi~~~~~l~~~~~~----~~~-~~~~p~l~~~~~~~~~rp~~~~~ 201 (210)
T TIGR01262 127 NRWYQHWISKGFAALEALLQPHAGAFCVGDTPTLADLCLVPQVYNAERF----GVD-LTPYPTLRRIAAALAALPAFQRA 201 (210)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCEeeCCCCCHHHHHHHHHHHHHHHc----CCC-cccchHHHHHHHHHhcCHHHHHh
Confidence 344566789999999999986 45999999999999999998876532 333 37899999999999999999999
Q ss_pred cCCh
Q 033674 94 LPDG 97 (114)
Q Consensus 94 ~~~~ 97 (114)
.+..
T Consensus 202 ~~~~ 205 (210)
T TIGR01262 202 HPEN 205 (210)
T ss_pred Cccc
Confidence 8754
No 35
>PLN02395 glutathione S-transferase
Probab=99.45 E-value=3.7e-13 Score=89.44 Aligned_cols=81 Identities=20% Similarity=0.336 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhhhhh
Q 033674 14 EEQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKA 93 (114)
Q Consensus 14 ~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~ 93 (114)
+..+...+++.+.++.+|++|++++|++|+++|+||+++++++.+.... .......+.+|+|.+|++++.++|+++++
T Consensus 130 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~--~~~~~~~~~~p~L~~w~~~~~~rp~~k~~ 207 (215)
T PLN02395 130 KVIKESEEKLAKVLDVYEARLSKSKYLAGDFVSLADLAHLPFTEYLVGP--IGKAYLIKDRKHVSAWWDDISSRPAWKEV 207 (215)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccCCCcCHHHHHHHHHHHHHhcc--cchhhhhccCchHHHHHHHHHcChHHHHH
Confidence 3345667888999999999999889999999999999999988765321 11112247799999999999999999998
Q ss_pred cCC
Q 033674 94 LPD 96 (114)
Q Consensus 94 ~~~ 96 (114)
+..
T Consensus 208 ~~~ 210 (215)
T PLN02395 208 LAK 210 (215)
T ss_pred HHH
Confidence 653
No 36
>PLN02473 glutathione S-transferase
Probab=99.45 E-value=3.1e-13 Score=89.78 Aligned_cols=79 Identities=22% Similarity=0.324 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhhhhhc
Q 033674 15 EQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKAL 94 (114)
Q Consensus 15 ~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 94 (114)
..+....++.+.++.+|++|++++|++|+++|+||+++++.+.+..... ....+.+.+|+|.+|++++.++|+++++.
T Consensus 132 ~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~~~~~~~~~~~~~--~~~~~~~~~P~l~~w~~~~~~~p~~~~~~ 209 (214)
T PLN02473 132 LVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLTHMPGMRYIMNET--SLSGLVTSRENLNRWWNEISARPAWKKLM 209 (214)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHHHhcc--ccHHHHhcCHHHHHHHHHHhcChhhHHHH
Confidence 3455667888999999999998899999999999999999988764321 11122478999999999999999999876
Q ss_pred C
Q 033674 95 P 95 (114)
Q Consensus 95 ~ 95 (114)
.
T Consensus 210 ~ 210 (214)
T PLN02473 210 E 210 (214)
T ss_pred H
Confidence 4
No 37
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.45 E-value=2.8e-13 Score=89.76 Aligned_cols=77 Identities=18% Similarity=0.173 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHHHHhhhCCC--CcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhhhhhc
Q 033674 17 EAAKKEFFEVLKTLEGQLGDK--PFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKAL 94 (114)
Q Consensus 17 ~~~~~~~~~~l~~le~~l~~~--~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 94 (114)
+...+.+.+.+..+|+.|+++ +|++|+++|+||+++++++.++... .+.+ .+.||+|.+|.+++.++|.+++++
T Consensus 122 ~~~~~~~~~~l~~le~~L~~~~~~~l~Gd~~T~AD~~l~~~~~~~~~~---~~~~-l~~~P~l~~~~~r~~~~P~~k~y~ 197 (205)
T PTZ00057 122 TFLNEELPKWSGYFENILKKNHCNYFVGDNLTYADLAVFNLYDDIETK---YPNS-LKNFPLLKAHNEFISNLPNIKNYI 197 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeeeCCcccHHHHHHHHHHHHHHHh---Chhh-hccChhHHHHHHHHHhChHHHHHH
Confidence 345577889999999999753 7999999999999999988876531 2333 388999999999999999999997
Q ss_pred CCh
Q 033674 95 PDG 97 (114)
Q Consensus 95 ~~~ 97 (114)
.+.
T Consensus 198 ~~~ 200 (205)
T PTZ00057 198 SNR 200 (205)
T ss_pred HhC
Confidence 654
No 38
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.41 E-value=1.7e-12 Score=85.50 Aligned_cols=79 Identities=19% Similarity=0.222 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhhhhhc
Q 033674 15 EQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKAL 94 (114)
Q Consensus 15 ~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 94 (114)
..+...+.+.+.++.+|++|.+++ ++|+++|+||+++++.+.++... ..+..+...+|+|.+|++++.++|+++++.
T Consensus 122 ~~~~~~~~l~~~l~~le~~L~~~~-l~Gd~~t~ADi~l~~~l~~~~~~--~~~~~~~~~~p~l~~~~~~i~~rp~~~~~~ 198 (202)
T PRK10357 122 ELLRQREKINRSLDALEGYLVDGT-LKTDTVNLATIAIACAVGYLNFR--RVAPGWCVDRPHLVKLVENLFQRESFARTE 198 (202)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCc-ccCCCcCHHHHHHHHHHHHHHhc--ccCcchhhcChHHHHHHHHHhcChhhhhcC
Confidence 345667789999999999998777 99999999999999999887542 112222467999999999999999999987
Q ss_pred CC
Q 033674 95 PD 96 (114)
Q Consensus 95 ~~ 96 (114)
+.
T Consensus 199 ~~ 200 (202)
T PRK10357 199 PP 200 (202)
T ss_pred CC
Confidence 75
No 39
>PRK11752 putative S-transferase; Provisional
Probab=99.39 E-value=2.1e-12 Score=88.74 Aligned_cols=83 Identities=18% Similarity=0.288 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhh--cCCCccccCchHHHHHHHHhcChhhhh
Q 033674 15 EQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETC--GKFNVEAECPKFIAWVKRCLQRETVAK 92 (114)
Q Consensus 15 ~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~--~~~~~~~~~p~l~~~~~~~~~~p~~~~ 92 (114)
..+...+++.+.|+.+|++|++++|++|+++|+||+++++++.++...... .+....+.+|+|.+|+++|.++|++++
T Consensus 175 ~~~~~~~~~~~~L~~le~~L~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~rPs~k~ 254 (264)
T PRK11752 175 AINRFTMEAKRQLDVLDKQLAEHEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAERPAVKR 254 (264)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHhCHHHHH
Confidence 345556778899999999999889999999999999999988766431000 111114789999999999999999999
Q ss_pred hcCCh
Q 033674 93 ALPDG 97 (114)
Q Consensus 93 ~~~~~ 97 (114)
+....
T Consensus 255 ~~~~~ 259 (264)
T PRK11752 255 GRIVN 259 (264)
T ss_pred HHhcc
Confidence 87653
No 40
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.38 E-value=3.8e-12 Score=78.31 Aligned_cols=68 Identities=29% Similarity=0.541 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhc
Q 033674 16 QEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQ 86 (114)
Q Consensus 16 ~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 86 (114)
.+...+++.+.++.+|++|++++|++|+++|+||+++++.+.+.... .+.++.+.+|++.+|+++|.+
T Consensus 56 ~~~~~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~---~~~~~~~~~p~l~~W~~r~~~ 123 (124)
T cd03202 56 REAALANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIV---SPFPLLEEDDPVYDWFERCLD 123 (124)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHc---CcccccccCChHHHHHHHHhc
Confidence 45667789999999999999999999999999999999998887642 234445789999999999976
No 41
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.37 E-value=4.5e-12 Score=76.90 Aligned_cols=73 Identities=19% Similarity=0.150 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhC-CCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhhhhh
Q 033674 15 EQEAAKKEFFEVLKTLEGQLG-DKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKA 93 (114)
Q Consensus 15 ~~~~~~~~~~~~l~~le~~l~-~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~ 93 (114)
..+.....+.+.++.+|..++ +++|++| ++|+||+++++++.|+... |.++ + |++.+|.++|.++|++++.
T Consensus 39 ~~~~~~~~~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l~~~~~~~~~~----g~~l-~--p~l~ay~~r~~~rPa~~~~ 110 (114)
T cd03195 39 LSEAAQAAAEKLIAVAEALLPPGAANLFG-EWCIADTDLALMLNRLVLN----GDPV-P--ERLRDYARRQWQRPSVQAW 110 (114)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCcccC-CccHHHHHHHHHHHHHHHc----CCCC-C--HHHHHHHHHHHCCHHHHHH
Confidence 456677888899999999995 5589999 5999999999999998753 5554 3 9999999999999999987
Q ss_pred cC
Q 033674 94 LP 95 (114)
Q Consensus 94 ~~ 95 (114)
+.
T Consensus 111 ~~ 112 (114)
T cd03195 111 LA 112 (114)
T ss_pred Hh
Confidence 63
No 42
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.36 E-value=7e-12 Score=76.08 Aligned_cols=71 Identities=23% Similarity=0.310 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHHhhh---CCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhhhhh
Q 033674 17 EAAKKEFFEVLKTLEGQL---GDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKA 93 (114)
Q Consensus 17 ~~~~~~~~~~l~~le~~l---~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~ 93 (114)
+...+.+.+.++.+|..+ ++++|++|+ +|+||+++++.+.|... .+.+. .|+|.+|.+++.++|+++++
T Consensus 40 ~~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~----~~~~~---~P~l~~~~~rv~~rPsv~~~ 111 (114)
T cd03194 40 EAVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRFRT----YGLPL---SPAAQAYVDALLAHPAMQEW 111 (114)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHH----cCCCC---CHHHHHHHHHHHCCHHHHHH
Confidence 444555555666665555 467899999 99999999999888754 23332 39999999999999999987
Q ss_pred cC
Q 033674 94 LP 95 (114)
Q Consensus 94 ~~ 95 (114)
+.
T Consensus 112 ~~ 113 (114)
T cd03194 112 IA 113 (114)
T ss_pred Hh
Confidence 64
No 43
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.34 E-value=1.1e-11 Score=71.67 Aligned_cols=72 Identities=21% Similarity=0.186 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCC---CccccCchHHHHHHHHh
Q 033674 13 GEEQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKF---NVEAECPKFIAWVKRCL 85 (114)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~---~~~~~~p~l~~~~~~~~ 85 (114)
+.......+++.+.++.+|+.|++++|++|+++|+||+++++.+.++.... .... ...+.+|+|.+|++++.
T Consensus 14 ~~~~~~~~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~~-~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 14 WTLTREIYSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYAP-LPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhcC-CCChHHHHHHHhCcHHHHHHHHhC
Confidence 455667788899999999999999999999999999999999988765320 1110 01367999999999874
No 44
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.34 E-value=6.5e-12 Score=73.34 Aligned_cols=70 Identities=27% Similarity=0.490 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHH
Q 033674 13 GEEQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRC 84 (114)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~ 84 (114)
++..+...+++.+.++.+|++|++++|++|+++|+||+++++++.++.......+ +.+.+|++.+|.+++
T Consensus 31 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~~~~~--~~~~~p~l~~~~~~~ 100 (100)
T cd00299 31 EAALEEAREELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARLDLLGPLLG--LLDEYPRLAAWYDRL 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhhhhhh--hhccCccHHHHHHhC
Confidence 4566778889999999999999988999999999999999999999876431111 247899999999874
No 45
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.33 E-value=6.6e-12 Score=74.45 Aligned_cols=68 Identities=25% Similarity=0.393 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHh
Q 033674 13 GEEQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCL 85 (114)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~ 85 (114)
++..+...+++.+.++.+|..|++++|++|+++|+||+++++++.++.. .+.+ ...+|+|.+|.++++
T Consensus 38 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~~~~~~~~----~~~~-~~~~p~l~~~~~~~~ 105 (105)
T cd03179 38 AEVLAFLRERGHAALAVLEAHLAGRDFLVGDALTIADIALAAYTHVADE----GGFD-LADYPAIRAWLARIE 105 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCccccCCCCCHHHHHHHHHHHhccc----cCCC-hHhCccHHHHHHhhC
Confidence 4556778888999999999999888999999999999999999988754 2334 477999999999874
No 46
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.30 E-value=9.7e-12 Score=73.83 Aligned_cols=68 Identities=22% Similarity=0.319 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCC--CCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCc-cccCchHHHHHHHH
Q 033674 13 GEEQEAAKKEFFEVLKTLEGQLGD--KPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNV-EAECPKFIAWVKRC 84 (114)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~l~~--~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~-~~~~p~l~~~~~~~ 84 (114)
++..+...+.+.+.++.+|+++++ ++|++|+++|+||+++++++.++... +... ...+|+|.+|.+++
T Consensus 34 ~~~~~~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~----~~~~~~~~~p~l~~~~~~~ 104 (104)
T cd03192 34 EKKKEFLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVLDYLLYL----DPKLLLKKYPKLKALRERV 104 (104)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHHHHHHhh----CchhhHHhChhHHHHHHhC
Confidence 455566778899999999999977 78999999999999999999888653 2222 47899999999874
No 47
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.24 E-value=2.2e-11 Score=71.96 Aligned_cols=67 Identities=21% Similarity=0.433 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCC--cccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhc
Q 033674 14 EEQEAAKKEFFEVLKTLEGQLGDKP--FFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQ 86 (114)
Q Consensus 14 ~~~~~~~~~~~~~l~~le~~l~~~~--~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 86 (114)
...+...+++.+.+..+|++|+.++ |++|+++|+||+++++++..+.. . .+.+.+|+|.+|++||.+
T Consensus 31 ~~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~~-----~-~~~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 31 ASGDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLRW-----A-DFPKDYPNLVRWYERIEE 99 (99)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHHC-----C-HHTTTCHHHHHHHHHHHT
T ss_pred hhHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHhh-----c-ccccccHHHHHHHHhhcC
Confidence 3456677889999999999998766 99999999999999998854432 1 222589999999999974
No 48
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.24 E-value=6.5e-11 Score=78.58 Aligned_cols=73 Identities=32% Similarity=0.517 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhhh
Q 033674 14 EEQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVA 91 (114)
Q Consensus 14 ~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 91 (114)
...+...+.+...++.+|+.|.+++|++|+++|+||+++++.+.++.. .+... +.+|++.+|++++.++|.++
T Consensus 127 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~tiAD~~~~~~~~~~~~----~~~~~-~~~p~l~~w~~r~~~rp~~~ 199 (211)
T COG0625 127 AALEAARAEIRALLALLEALLADGPYLAGDRFTIADIALAPLLWRLAL----LGEEL-ADYPALKAWYERVLARPAFR 199 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHhhh----cCccc-ccChHHHHHHHHHHcCCchh
Confidence 445677888999999999999999999999999999999999998654 23343 78999999999999999965
No 49
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=99.20 E-value=1.1e-10 Score=76.59 Aligned_cols=108 Identities=16% Similarity=0.310 Sum_probs=85.3
Q ss_pred hhhHHHHH-cCCHHHHHHHHHHHHHHHHHHHhhhCC---CCcccCCCCChhhHHHHhHHHHHHHhh-hhcCCCccccCch
Q 033674 2 YDSLRKTW-TTKGEEQEAAKKEFFEVLKTLEGQLGD---KPFFGGDNFGYVDLSLIPFYCWFYTYE-TCGKFNVEAECPK 76 (114)
Q Consensus 2 ~~~~~~~~-~~~~~~~~~~~~~~~~~l~~le~~l~~---~~~l~G~~~s~aD~~l~~~l~~~~~~~-~~~~~~~~~~~p~ 76 (114)
|..+..++ .++++.-+.....+...+.+|+.+|+. ++|+.|+++|.+||.++|=+..+.... .+.++++++.+++
T Consensus 106 F~kF~~fi~ksk~~~n~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~va~k~yk~~~IP~~lt~ 185 (221)
T KOG1422|consen 106 FAKFSAFIKKSKDAANDGLEKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKVAAKHYKNFEIPASLTG 185 (221)
T ss_pred HHHHHHHHhCchhhccchHHHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhchhHHHHHHHHHHhcCCCCchhhhH
Confidence 33444443 333444445556788899999999985 689999999999999999998777553 4457888899999
Q ss_pred HHHHHHHHhcChhhhhhcCChhHHHHHHHHHHH
Q 033674 77 FIAWVKRCLQRETVAKALPDGKKVFEFVSVMRT 109 (114)
Q Consensus 77 l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 109 (114)
+.+|+..+.+++.|..+.+....+...|....+
T Consensus 186 V~rYl~~~ya~d~F~~tcp~d~ei~~~y~~~~~ 218 (221)
T KOG1422|consen 186 VWRYLKNAYARDEFTNTCPADQEIILAYAPVAK 218 (221)
T ss_pred HHHHHHHHHhHHHhhcCCchHHHHHHhhhhhhh
Confidence 999999999999999999998887777765443
No 50
>PRK10387 glutaredoxin 2; Provisional
Probab=99.20 E-value=3.5e-11 Score=79.59 Aligned_cols=66 Identities=15% Similarity=0.147 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhh
Q 033674 18 AAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETV 90 (114)
Q Consensus 18 ~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 90 (114)
...+.+.+.++.+|++|++ +|++|+++|+||+++++.+.|+... .+. +.+|+|.+|++||.++|++
T Consensus 142 ~~~~~~~~~l~~le~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~---~~~---~~~p~l~~w~~r~~~r~~~ 207 (210)
T PRK10387 142 GLIKEINADLRALDPLIVK-PNAVNGELSTDDIHLFPILRNLTLV---KGI---EWPPRVADYRDNMSKKTQV 207 (210)
T ss_pred HHHHHHHHHHHHHHHHhcC-ccccCCCCCHHHHHHHHHHhcceee---cCC---CCCHHHHHHHHHHHHHhCC
Confidence 4567888999999999987 9999999999999999999887642 122 3469999999999999976
No 51
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=99.19 E-value=1.6e-10 Score=78.22 Aligned_cols=98 Identities=20% Similarity=0.205 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCC----CCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCc-cccCchHHHHHHHHhcCh
Q 033674 14 EEQEAAKKEFFEVLKTLEGQLGD----KPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNV-EAECPKFIAWVKRCLQRE 88 (114)
Q Consensus 14 ~~~~~~~~~~~~~l~~le~~l~~----~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~-~~~~p~l~~~~~~~~~~p 88 (114)
....+..+.+...|+.+|+.|.+ ..|++|+.+|+||+++++++.++...+ ..+.-| ...-|+|..|+.|+.+++
T Consensus 201 s~lkkild~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg-~e~~yw~~gsrpnle~Yf~rvrrR~ 279 (325)
T KOG4420|consen 201 SYLKKILDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLG-LEKKYWEDGSRPNLESYFERVRRRF 279 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHcc-cHHHhcccCCCccHHHHHHHHHhhh
Confidence 34556677788889999999876 479999999999999999999887652 111122 357899999999999999
Q ss_pred hhhhhcCChhHHHHHHHHHHHhhc
Q 033674 89 TVAKALPDGKKVFEFVSVMRTNLG 112 (114)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~ 112 (114)
++++.++..-.+.-+....+++++
T Consensus 280 sf~kvlg~~fnilr~~~~~~ktp~ 303 (325)
T KOG4420|consen 280 SFRKVLGDIFNILRFRLVKRKTPS 303 (325)
T ss_pred HHHHhhhhHHHHHHHHHHHhcCch
Confidence 999999886665556666665544
No 52
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.19 E-value=8.7e-11 Score=69.27 Aligned_cols=58 Identities=26% Similarity=0.393 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhc
Q 033674 21 KEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQ 86 (114)
Q Consensus 21 ~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 86 (114)
.++.+.++.+|++|++++|++|+++|+||+++++.+.+. +.. .+.+|+|.+|+++|.+
T Consensus 38 ~~~~~~l~~le~~L~~~~fl~Gd~~tiADi~l~~~l~~~-------~~~-~~~~p~l~~w~~r~~~ 95 (96)
T cd03200 38 KEKAAVLRALNSALGRSPWLVGSEFTVADIVSWCALLQT-------GLA-SAAPANVQRWLKSCEN 95 (96)
T ss_pred HHHHHHHHHHHHHHcCCCccCCCCCCHHHHHHHHHHHHc-------ccc-cccChHHHHHHHHHHh
Confidence 345678889999999999999999999999999887642 222 3689999999999975
No 53
>PRK15113 glutathione S-transferase; Provisional
Probab=99.18 E-value=1.1e-10 Score=77.77 Aligned_cols=75 Identities=19% Similarity=0.153 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHHHHhhhCC-CCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhhhhhc
Q 033674 16 QEAAKKEFFEVLKTLEGQLGD-KPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKAL 94 (114)
Q Consensus 16 ~~~~~~~~~~~l~~le~~l~~-~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 94 (114)
.+...+++.+.++.+|++|++ ++|++|+ +|+||+++++.+.++.. .+.++ .|+|.+|.+++.++|++++++
T Consensus 135 ~~~~~~~~~~~l~~le~~L~~~~~~l~G~-~TlADi~l~~~l~~~~~----~~~~~---~p~l~~~~~r~~~rp~~~~~~ 206 (214)
T PRK15113 135 SEAGKAAAEKLFAVAERLLAPGQPNLFGE-WCIADTDLALMLNRLVL----HGDEV---PERLADYATFQWQRASVQRWL 206 (214)
T ss_pred cHHHHHHHHHHHHHHHHHHhcCCCEeeCC-ccHHHHHHHHHHHHHHH----cCCCC---CHHHHHHHHHHhcCHHHHHHH
Confidence 456677889999999999975 4699985 99999999999887653 23332 299999999999999999987
Q ss_pred CChh
Q 033674 95 PDGK 98 (114)
Q Consensus 95 ~~~~ 98 (114)
.+.+
T Consensus 207 ~~~~ 210 (214)
T PRK15113 207 ALSA 210 (214)
T ss_pred HHhh
Confidence 7654
No 54
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.13 E-value=2.8e-10 Score=67.08 Aligned_cols=67 Identities=19% Similarity=0.294 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHH
Q 033674 13 GEEQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRC 84 (114)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~ 84 (114)
++..+....++.+.++.+|++|++++| +++|+||+++++.+.|.... ..+.++.+.+|+|.+|+++|
T Consensus 32 ~~~~~~~~~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~~~--~~~~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 32 QPWLERQRGKIERALDALEAELAKLPL---DPLDLADIAVACALGYLDFR--HPDLDWRAAHPALAAWYARF 98 (98)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHhH--ccCcchhhhChHHHHHHHhC
Confidence 455677888899999999999998888 89999999999999887642 12333347899999999875
No 55
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.07 E-value=6.4e-11 Score=80.65 Aligned_cols=95 Identities=21% Similarity=0.288 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhh-hhcCCCc--cccCchHHHHHHHHhcChh
Q 033674 13 GEEQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYE-TCGKFNV--EAECPKFIAWVKRCLQRET 89 (114)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~-~~~~~~~--~~~~p~l~~~~~~~~~~p~ 89 (114)
+++.++..+++.+.|+.+|+.|+++.|++|+++|-||+-+++.+-+++.+- .++..+. ..+||+|..|..++.+.|.
T Consensus 200 q~aYeea~~~lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI~dypnL~~yLr~LYq~pg 279 (324)
T COG0435 200 QEAYEEAVKKLFEALDKLEQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGYLRDLYQLPG 279 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCeeeccccchHhhhhhhheeEeecceEEeeeecccchhhcCchHHHHHHHHhcCcc
Confidence 778889999999999999999999999999999999999999998887641 1122222 3569999999999999999
Q ss_pred hhhhcCChhHHHHHHHHH
Q 033674 90 VAKALPDGKKVFEFVSVM 107 (114)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~ 107 (114)
|+.++.-...-..|+.++
T Consensus 280 ~~~T~df~hIK~hYyrSh 297 (324)
T COG0435 280 FAETVDFDHIKLHYYRSH 297 (324)
T ss_pred cccccchhHhhhhheecc
Confidence 999987776666666554
No 56
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.02 E-value=6e-10 Score=68.76 Aligned_cols=70 Identities=17% Similarity=0.252 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhc--CCC-ccccCchHHHHHHHHh
Q 033674 15 EQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCG--KFN-VEAECPKFIAWVKRCL 85 (114)
Q Consensus 15 ~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~--~~~-~~~~~p~l~~~~~~~~ 85 (114)
..+.......+.++.|+..|++++|++|+++|.+|+++++++.++.... .. +.. ....+|+|.+|++||.
T Consensus 54 ~~ee~~~~~~~~l~aLs~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~-~~~~~l~~~~~~~pnL~~y~~Ri~ 126 (126)
T cd03211 54 TLDQVIEEVDQCCQALSQRLGTQPYFFGDQPTELDALVFGHLFTILTTQ-LPNDELAEKVKKYSNLLAFCRRIE 126 (126)
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcC-CCChHHHHHHHhCcHHHHHHHhcC
Confidence 3456667788999999999999999999999999999999986654210 00 111 1468999999999973
No 57
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.01 E-value=1e-10 Score=79.06 Aligned_cols=102 Identities=21% Similarity=0.250 Sum_probs=81.1
Q ss_pred HHHHcCC-HHHHHHHHHHHHHHHHHHHhhhCCCC--cccCCCCChhhHHHHhHHHHHHHh-hhhcCCC---ccccCchHH
Q 033674 6 RKTWTTK-GEEQEAAKKEFFEVLKTLEGQLGDKP--FFGGDNFGYVDLSLIPFYCWFYTY-ETCGKFN---VEAECPKFI 78 (114)
Q Consensus 6 ~~~~~~~-~~~~~~~~~~~~~~l~~le~~l~~~~--~l~G~~~s~aD~~l~~~l~~~~~~-~~~~~~~---~~~~~p~l~ 78 (114)
+++-++. ++..+....++-+.|+++|..|+++. |++|+++|-||+.+++.+-+++.+ ..++..+ ++++||+|.
T Consensus 190 Yk~GFA~~~e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~ir~~Yp~l~ 269 (319)
T KOG2903|consen 190 YKCGFAEKQEAYEEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTIRDEYPNLH 269 (319)
T ss_pred eeeccccccchHHHHHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhhhccCcHHH
Confidence 4444444 78889999999999999999999875 999999999999999998777644 1222222 267999999
Q ss_pred HHHHHHhc-ChhhhhhcCChhHHHHHHHHH
Q 033674 79 AWVKRCLQ-RETVAKALPDGKKVFEFVSVM 107 (114)
Q Consensus 79 ~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~ 107 (114)
.|..++.+ .|++..+..-......|+.++
T Consensus 270 ~~lk~iY~~~~~~~~Ttd~~hIk~~Y~~S~ 299 (319)
T KOG2903|consen 270 NWLKNIYWNIPGFSSTTDFNHIKLHYYRSH 299 (319)
T ss_pred HHHHHHHhhccchhhccchhHHhhhhcccc
Confidence 99999998 999999987777777776543
No 58
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.98 E-value=3e-09 Score=66.57 Aligned_cols=71 Identities=21% Similarity=0.318 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCC---CccccCchHHHHHHHHhc
Q 033674 15 EQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKF---NVEAECPKFIAWVKRCLQ 86 (114)
Q Consensus 15 ~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~---~~~~~~p~l~~~~~~~~~ 86 (114)
..+...+...+.++.|++.|++++|++|+++|.+|+++++++..+... ..... .....+|+|.+|++||.+
T Consensus 61 ~~~~~~~~a~~~l~~l~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~-~~~~~~l~~~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 61 VEAEIYRDAKECLNLLSQRLGESQFFFGDTPTSLDALVFGYLAPLLKA-PLPNNKLQNHLKQCPNLCRFCDRILS 134 (137)
T ss_pred hHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhc-cCCChHHHHHHHHCcHHHHHHHHHHH
Confidence 456667778899999999999999999999999999999887655321 01100 014689999999999975
No 59
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.97 E-value=2.9e-09 Score=70.65 Aligned_cols=77 Identities=19% Similarity=0.156 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHhhhC--CCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhhhhhcC
Q 033674 18 AAKKEFFEVLKTLEGQLG--DKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKALP 95 (114)
Q Consensus 18 ~~~~~~~~~l~~le~~l~--~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 95 (114)
.........+..+++.|+ +++|++||++|+||+.++..+..+... ...+..+.+|+|.++.+++.++|.+++++.
T Consensus 123 ~~~Pa~~~~~~~~~~~L~~~~sgflvGd~lT~aDl~i~e~l~~l~~~---~~~~~~~~~P~L~a~~~kv~~~p~ik~~i~ 199 (206)
T KOG1695|consen 123 LYLPAKPKYFKILEKILKKNKSGFLVGDKLTWADLVIAEHLDTLEEL---LDPSALDHFPKLKAFKERVSSIPNIKKYLE 199 (206)
T ss_pred hhccchHHHHHHHHHHHHhCCCCeeecCcccHHHHHHHHHHHHHHHh---cCchhhccChHHHHHHHHHhcCchHHHHHh
Confidence 455567788899999997 458999999999999999999887652 233445788999999999999999999876
Q ss_pred Ch
Q 033674 96 DG 97 (114)
Q Consensus 96 ~~ 97 (114)
..
T Consensus 200 ~r 201 (206)
T KOG1695|consen 200 SR 201 (206)
T ss_pred cC
Confidence 53
No 60
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.96 E-value=5.2e-09 Score=70.52 Aligned_cols=83 Identities=22% Similarity=0.303 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhhhh
Q 033674 13 GEEQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAK 92 (114)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~ 92 (114)
....+....++...++.+|.++.++.|+.|+++|+||+.+.+.+..+.. . ........++|++.+|++++.++|+.++
T Consensus 128 ~~~~~~~~~~~~~~~~~~e~~l~~~~yl~g~~~tlADl~~~~~~~~~~~-~-~~~~~~~~~~p~v~~W~~~~~~~P~~~e 205 (226)
T KOG0867|consen 128 PTAVKELEAKLRKALDNLERFLKTQVYLAGDQLTLADLSLASTLSQFQG-K-FATEKDFEKYPKVARWYERIQKRPAYEE 205 (226)
T ss_pred chhhHHHHHHHHHHHHHHHHHHccCCcccCCcccHHHHHHhhHHHHHhH-h-hhhhhhhhhChHHHHHHHHHHhCccHHH
Confidence 4556777888999999999999999999999999999999999988742 1 1222335899999999999999999887
Q ss_pred hcCCh
Q 033674 93 ALPDG 97 (114)
Q Consensus 93 ~~~~~ 97 (114)
..+..
T Consensus 206 ~~~~~ 210 (226)
T KOG0867|consen 206 ANEKG 210 (226)
T ss_pred HHHHH
Confidence 66543
No 61
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.94 E-value=4.4e-09 Score=66.39 Aligned_cols=66 Identities=21% Similarity=0.337 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHHHhhh-CCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCC-CccccCchHHHHHHHHhc
Q 033674 17 EAAKKEFFEVLKTLEGQL-GDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKF-NVEAECPKFIAWVKRCLQ 86 (114)
Q Consensus 17 ~~~~~~~~~~l~~le~~l-~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~-~~~~~~p~l~~~~~~~~~ 86 (114)
+..++.+...++..-+.+ ++++|++|+++|+||+++++.+..+... .++ ++ .++|++.+|+++|.+
T Consensus 78 ~D~r~~L~~a~~~w~~~~~~~~~FlaGd~ptIADisvyg~l~s~e~~---~~~~Dl-~~~p~I~~W~eRm~~ 145 (149)
T cd03197 78 DDVREWLYDALNTWVAALGKDRQFHGGSKPNLADLAVYGVLRSVEGH---PAFKDM-VEETKIGEWYERMDA 145 (149)
T ss_pred chHHHHHHHHHHHHHHHhcCCCCccCCCCCCHHHHHHHHHHHHHHHh---ccccch-hhCcCHHHHHHHHHH
Confidence 334555555665554445 4468999999999999999999877653 245 54 789999999999986
No 62
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=98.93 E-value=1.5e-09 Score=72.26 Aligned_cols=66 Identities=12% Similarity=0.197 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCc-hHHHHHHHHhcChhh
Q 033674 17 EAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECP-KFIAWVKRCLQRETV 90 (114)
Q Consensus 17 ~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~p~~ 90 (114)
+...+.+.+.++.+|++|++++|++| ++|+||+++++.+.|+... .+ ..+| +|.+|++||.+++.+
T Consensus 140 ~~~~~~~~~~l~~le~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~---~~----~~~p~~l~~w~~Ri~ar~~~ 206 (209)
T TIGR02182 140 PGLLEEINADLEELDKLIDGPNAVNG-ELSEDDILVFPLLRNLTLV---AG----INWPSRVADYLDNMSKKSKV 206 (209)
T ss_pred HHHHHHHHHHHHHHHHHHhCccccCC-CCCHHHHHHHHHhcCeeee---cC----CCCChHHHHHHHHHHHHhCC
Confidence 34567788999999999999999855 6999999999998876642 11 1356 999999999998875
No 63
>PLN02907 glutamate-tRNA ligase
Probab=98.86 E-value=8e-09 Score=79.46 Aligned_cols=66 Identities=12% Similarity=0.210 Sum_probs=52.7
Q ss_pred HHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChh
Q 033674 22 EFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRET 89 (114)
Q Consensus 22 ~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~ 89 (114)
.+...++.+|++|+.++|++|+++|+||+++++.+...... ..+......+|+|.+|++++.++|+
T Consensus 94 ~l~~~L~~LE~~L~~rtYLvGd~lTLADIaL~~~L~~~~~~--~~~~~~~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 94 EFENACEYVDGYLASRTFLVGYSLTIADIAIWSGLAGSGQR--WESLRKSKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred HHHHHHHHHHHHhccCCeecCCCCCHHHHHHHHHHHhhhhh--hhcccccccCHHHHHHHHHHHhCCC
Confidence 45667899999999999999999999999999887654210 1122224789999999999999999
No 64
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.79 E-value=2.8e-08 Score=64.13 Aligned_cols=76 Identities=18% Similarity=0.163 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHHHHhhhCC--CCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhhhhh
Q 033674 16 QEAAKKEFFEVLKTLEGQLGD--KPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKA 93 (114)
Q Consensus 16 ~~~~~~~~~~~l~~le~~l~~--~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~ 93 (114)
.......+.++++.||+.|.. +.|-.||++|+||+++.|.+.-... +..++ ..||.+.+..+.....|+|+.+
T Consensus 130 ~~W~q~~ItkGF~ALEklL~~~aGkycvGDevtiADl~L~pqv~nA~r----f~vdl-~PYPti~ri~e~l~elpaFq~a 204 (217)
T KOG0868|consen 130 DQWAQHFITKGFTALEKLLKSHAGKYCVGDEVTIADLCLPPQVYNANR----FHVDL-TPYPTITRINEELAELPAFQAA 204 (217)
T ss_pred hHHHHHHHHHhHHHHHHHHHHccCCcccCceeehhhhccchhhhhhhh----ccccC-CcCchHHHHHHHHHhCHHHHhc
Confidence 456677799999999999975 5799999999999999999887643 34564 8999999999999999999998
Q ss_pred cCC
Q 033674 94 LPD 96 (114)
Q Consensus 94 ~~~ 96 (114)
-|+
T Consensus 205 hP~ 207 (217)
T KOG0868|consen 205 HPD 207 (217)
T ss_pred CCC
Confidence 775
No 65
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=98.40 E-value=3.3e-06 Score=50.88 Aligned_cols=71 Identities=24% Similarity=0.244 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHHhhhCC-CCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhhhhhcC
Q 033674 17 EAAKKEFFEVLKTLEGQLGD-KPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVAKALP 95 (114)
Q Consensus 17 ~~~~~~~~~~l~~le~~l~~-~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 95 (114)
+.....+.+.+...+..+.. ++|++| +.||||..+++++.++.. .|.++ -+.+..|.++.-++|++++.+.
T Consensus 42 ~~a~~~a~kL~~~a~~ll~~g~~~LFG-ewsIAD~dlA~ml~Rl~~----~gd~v---P~~l~~Ya~~qwqrpsVQ~Wla 113 (117)
T PF14834_consen 42 EAAQAAAQKLIAVAERLLADGGPNLFG-EWSIADADLALMLNRLVT----YGDPV---PERLADYAERQWQRPSVQRWLA 113 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTTT--SSTTS-S--HHHHHHHHHHHHHHT----TT-------HHHHHHHHHHHT-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCccc-cchHHHHHHHHHHHHHHH----cCCCC---CHHHHHHHHHHHCCHHHHHHHH
Confidence 44455566677777777765 589999 599999999999999875 23333 4789999999999999998753
No 66
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.09 E-value=7.4e-06 Score=54.21 Aligned_cols=74 Identities=16% Similarity=0.289 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCc---cccCchHHHHHHHHhcC
Q 033674 13 GEEQEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNV---EAECPKFIAWVKRCLQR 87 (114)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~---~~~~p~l~~~~~~~~~~ 87 (114)
+...+...+++...++.|+.+|+..+||.|+.+|=.|..++.++..+-.. +..+..+ ...|++|.++.+|+.+.
T Consensus 172 ~~~~DqVie~vdkc~~aLsa~L~~q~yf~g~~P~elDAlvFGHlytilTt-~Lpn~ela~~lkkys~LlefcrrIeq~ 248 (257)
T KOG3027|consen 172 DKTMDQVIEQVDKCCRALSAQLGSQPYFTGDQPTELDALVFGHLYTILTT-RLPNMELANILKKYSNLLEFCRRIEQQ 248 (257)
T ss_pred cccHHHHHHHHHHHHHHHHHHhcCCCccCCCCccHHHHHHHhhhHHhhhh-cCCcHHHHHHHHHhHHHHHHHHHHHHH
Confidence 34557788899999999999999999999999999999999888755432 2333322 57899999999998864
No 67
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=97.93 E-value=1.1e-05 Score=55.21 Aligned_cols=69 Identities=19% Similarity=0.326 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHH-hhhhcCCCccccCchHHHHHHHHhc
Q 033674 18 AAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYT-YETCGKFNVEAECPKFIAWVKRCLQ 86 (114)
Q Consensus 18 ~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~-~~~~~~~~~~~~~p~l~~~~~~~~~ 86 (114)
+..+.+.+-++.++..|++.+|+.|+++|-+|+.++..+...-. +.....--+..++|+|..|++|+.+
T Consensus 203 Ei~ell~rDlr~i~~~Lg~KkflfGdkit~~DatvFgqLa~v~YP~~~~i~d~le~d~p~l~eYceRIr~ 272 (281)
T KOG4244|consen 203 EIDELLHRDLRAISDYLGDKKFLFGDKITPADATVFGQLAQVYYPFRSHISDLLEGDFPNLLEYCERIRK 272 (281)
T ss_pred HHHHHHHHHHHHHHHHhCCCccccCCCCCcceeeehhhhhheeccCCCcHHHHHhhhchHHHHHHHHHHH
Confidence 46677889999999999999999999999999999888764321 1000000114789999999999986
No 68
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=97.79 E-value=0.00013 Score=45.43 Aligned_cols=67 Identities=21% Similarity=0.218 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhh
Q 033674 17 EAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETV 90 (114)
Q Consensus 17 ~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 90 (114)
.....++...|..+|..+.......| ++|+-|+.++|.++-+..+ .|..++ |++.+|+++|.+...+
T Consensus 58 ~~~i~~l~~~L~~Le~ll~~~~~~n~-~LS~dDi~lFp~LR~Ltiv---kgi~~P---~~V~~Y~~~~s~~t~V 124 (132)
T PF04399_consen 58 PELIAELNADLEELEPLLASPNAVNG-ELSIDDIILFPILRSLTIV---KGIQWP---PKVRAYMDRMSKATGV 124 (132)
T ss_dssp HHHHHHHHHHHHHHHHH-SCTTBTTS-S--HHHHHHHHHHHHHCTC---TTS------HHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHHhccccccCC-CCCHHHHHHHHHHhhhhhc---cCCcCC---HHHHHHHHHHHHHcCC
Confidence 45567788888888888876554444 8999999999999987763 455553 8899999999987655
No 69
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=97.45 E-value=0.00091 Score=41.37 Aligned_cols=66 Identities=15% Similarity=0.131 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhh
Q 033674 18 AAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETV 90 (114)
Q Consensus 18 ~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 90 (114)
....++...|..++..+..... .++.+|+-|+.++|.++-+..+ .|..++ |++.+|+++|++...+
T Consensus 60 ~~i~~l~~~L~~l~~ll~~~~~-~n~~ls~DDi~lFp~LR~Lt~v---kgi~~P---~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 60 QYIAALNALLEELDPLILSSEA-VNGQLSTDDIILFPILRNLTLV---KGLVFP---PKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHHHHHHHcCccc-cCCcCCHHHHHHHHHHhhhhhh---cCCCCC---HHHHHHHHHHHHHhCC
Confidence 4456677778888888744333 4568999999999999987763 455553 8899999999986544
No 70
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=97.30 E-value=0.00067 Score=47.15 Aligned_cols=66 Identities=15% Similarity=0.270 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHhhh-CCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcC
Q 033674 19 AKKEFFEVLKTLEGQL-GDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQR 87 (114)
Q Consensus 19 ~~~~~~~~l~~le~~l-~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~ 87 (114)
.++.+-++++..-..+ ++++|++|+++++||++++.++..+...... .+ .-...++..|+.+|+..
T Consensus 289 ~Re~lydA~d~Wvaalgknr~flGG~kPnLaDLsvfGvl~sm~gc~af--kd-~~q~t~I~eW~~rmeal 355 (370)
T KOG3029|consen 289 EREHLYDAADQWVAALGKNRPFLGGKKPNLADLSVFGVLRSMEGCQAF--KD-CLQNTSIGEWYYRMEAL 355 (370)
T ss_pred HHHHHHHHHHHHHHHhCCCCCccCCCCCchhhhhhhhhhhHhhhhhHH--HH-HHhcchHHHHHHHHHHH
Confidence 4555666666666666 4579999999999999999999877654211 12 35678899999998763
No 71
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.15 E-value=0.0029 Score=44.41 Aligned_cols=71 Identities=20% Similarity=0.257 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCc---cccCchHHHHHHHHhcC
Q 033674 16 QEAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNV---EAECPKFIAWVKRCLQR 87 (114)
Q Consensus 16 ~~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~---~~~~p~l~~~~~~~~~~ 87 (114)
.+.......+++..+++.|++..|++|+++|--|+.++..+..+-..+ .....+ ...++||.++.+++.+.
T Consensus 161 e~~i~~~Aska~~~LS~~Lgs~kffFgd~psslDa~lfs~la~~~~~~-Lp~~~Lq~~l~~~~NL~~~~~~i~s~ 234 (313)
T KOG3028|consen 161 EDQIYKDASKALNLLSTLLGSKKFFFGDKPSSLDALLFSYLAILLQVA-LPNDSLQVHLLAHKNLVRYVERIRSL 234 (313)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceEeeCCCCchHHHHHHHHHHHHHhcc-CCchhHHHHHHhcchHHHHHHHHHHH
Confidence 344556678899999999999999999999999999999887743321 111111 23499999999998764
No 72
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=93.67 E-value=0.24 Score=32.53 Aligned_cols=67 Identities=9% Similarity=0.094 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhhh
Q 033674 18 AAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVA 91 (114)
Q Consensus 18 ~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 91 (114)
....++...++.++..+.+..-+ ...+|.-|+.++|+++-+... .|..|+ .++..|..+|.+...+.
T Consensus 142 ~~~~~i~~dl~~l~~Li~~~s~~-n~~l~~ddi~vFplLRnlt~v---~gi~wp---s~v~dy~~~msektqV~ 208 (215)
T COG2999 142 QYLKRIQADLRALDKLIVGPSAV-NGELSEDDILVFPLLRNLTLV---AGIQWP---SRVADYRDNMSEKTQVN 208 (215)
T ss_pred HHHHHHHHHHHHHHHHhcCcchh-ccccchhhhhhhHHhccceec---ccCCCc---HHHHHHHHHHHHhhCcc
Confidence 35677888899999888776523 346999999999999877653 455553 56899999999876664
No 73
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=93.16 E-value=0.4 Score=31.05 Aligned_cols=38 Identities=26% Similarity=0.358 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhhhCCC---CcccCCC-CChhhHHHHhHHHHH
Q 033674 22 EFFEVLKTLEGQLGDK---PFFGGDN-FGYVDLSLIPFYCWF 59 (114)
Q Consensus 22 ~~~~~l~~le~~l~~~---~~l~G~~-~s~aD~~l~~~l~~~ 59 (114)
.-.+.+..+++.|++. +|+.|+. +|-+||.++..+..+
T Consensus 112 ~a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~ 153 (168)
T PF11801_consen 112 LAMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALL 153 (168)
T ss_pred HHHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHH
Confidence 3567899999999887 8999987 999999998877654
No 74
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=93.08 E-value=0.064 Score=40.74 Aligned_cols=61 Identities=13% Similarity=0.131 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHH
Q 033674 21 KEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKR 83 (114)
Q Consensus 21 ~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~ 83 (114)
..+...+..++.+|.-..|++|.++|+||++++..+..-....... .....+-++.+|++-
T Consensus 91 ~~~s~~~~~ld~~l~~~t~lvg~sls~Ad~aiw~~l~~n~~~~~~l--k~~k~~~~v~Rw~~~ 151 (712)
T KOG1147|consen 91 DEISSSLSELDKFLVLRTFLVGNSLSIADFAIWGALHSNGMRQEQL--KAKKDYQNVERWYDL 151 (712)
T ss_pred HHHHHHHHHHHhhhhHHHHhhccchhHHHHHHHHHHhcccchHHHH--HhhCCchhhhhhcCc
Confidence 3356677788888887889999999999999998876321100000 112456778888873
No 75
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=77.91 E-value=1.5 Score=29.81 Aligned_cols=59 Identities=15% Similarity=0.117 Sum_probs=44.1
Q ss_pred HHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHhcChhhh
Q 033674 24 FEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCLQRETVA 91 (114)
Q Consensus 24 ~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 91 (114)
.++++.++.+|.+.+|..|.++|-.|+.++..+.- .+...++++..+|++.+.+.....
T Consensus 10 ~~glk~l~~sLA~ks~~~g~~~s~edv~vf~al~~---------ep~s~~~v~~~~w~~~l~a~~~~~ 68 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEKSYIEGYQLSKEDVVVFAALGV---------EPQSARLVNAERWYSKLEALLRLL 68 (231)
T ss_pred hhhhhhhhHhhhcccCCCCCCcccccceeehhccc---------CcchhhhhHHHHHHHHHHHHHHHH
Confidence 56888999999999999999999999988654431 122466788888888777655443
No 76
>PF03791 KNOX2: KNOX2 domain ; InterPro: IPR005541 The MEINOX region is comprised of two domains, KNOX1 and KNOX2. KNOX1 plays a role in suppressing target gene expression. KNOX2, essential for function, is thought to be necessary for homo-dimerization [].; GO: 0003677 DNA binding, 0005634 nucleus
Probab=66.47 E-value=14 Score=19.23 Aligned_cols=34 Identities=21% Similarity=0.226 Sum_probs=23.7
Q ss_pred hhhHHHHHcCCHHHHHHHHHHHHHHHHHHHhhhC
Q 033674 2 YDSLRKTWTTKGEEQEAAKKEFFEVLKTLEGQLG 35 (114)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~ 35 (114)
+.+|+.++..=.+...+........+..+|++|.
T Consensus 15 MeaYc~~L~kykeeL~~p~~EA~~f~~~ie~qL~ 48 (52)
T PF03791_consen 15 MEAYCDMLVKYKEELQRPFQEAMEFCREIEQQLS 48 (52)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566776666556666777777777888887765
No 77
>PHA02975 hypothetical protein; Provisional
Probab=44.37 E-value=42 Score=18.45 Aligned_cols=29 Identities=10% Similarity=0.180 Sum_probs=20.7
Q ss_pred ChhhHHHHHcCC-HHHHHHHHHHHHHHHHH
Q 033674 1 MYDSLRKTWTTK-GEEQEAAKKEFFEVLKT 29 (114)
Q Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~ 29 (114)
++.|+..+|.++ ++..++..+-+...|+.
T Consensus 4 LYaaiFGvFmsS~DdDF~nFI~vVksVLtd 33 (69)
T PHA02975 4 LFTGTYGVFLESNDSDFEDFIDTIMHVLTG 33 (69)
T ss_pred HHHHHHHhhcCCChHHHHHHHHHHHHHHcC
Confidence 356788888887 77777777766666553
No 78
>PHA02650 hypothetical protein; Provisional
Probab=40.08 E-value=52 Score=18.65 Aligned_cols=29 Identities=10% Similarity=0.194 Sum_probs=21.7
Q ss_pred ChhhHHHHHcCC-HHHHHHHHHHHHHHHHH
Q 033674 1 MYDSLRKTWTTK-GEEQEAAKKEFFEVLKT 29 (114)
Q Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~ 29 (114)
++.|+..+|.++ ++..++..+-+...|+.
T Consensus 4 LYaaiFGVFmsS~DdDFnnFI~VVkSVLtD 33 (81)
T PHA02650 4 LYAAIFGVFMSSTDDDFNNFIDVVKSVLSD 33 (81)
T ss_pred HHHHHHhhhcCCcHHHHHHHHHHHHHHHcC
Confidence 356888888888 77787777777766654
No 79
>PHA02844 putative transmembrane protein; Provisional
Probab=39.58 E-value=53 Score=18.37 Aligned_cols=29 Identities=14% Similarity=0.203 Sum_probs=21.2
Q ss_pred ChhhHHHHHcCC-HHHHHHHHHHHHHHHHH
Q 033674 1 MYDSLRKTWTTK-GEEQEAAKKEFFEVLKT 29 (114)
Q Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~ 29 (114)
++.|+..+|.++ ++..++..+-+...|+.
T Consensus 4 LYaaiFGVFmsS~DdDFnnFI~vVksVLtd 33 (75)
T PHA02844 4 LYTAIFGVFLSSENEDFNNFIDVVKSVLSD 33 (75)
T ss_pred HHHHHHhhhcCCchHHHHHHHHHHHHHHcC
Confidence 356788888888 77777777776666654
No 80
>PHA02819 hypothetical protein; Provisional
Probab=39.52 E-value=56 Score=18.07 Aligned_cols=29 Identities=10% Similarity=0.220 Sum_probs=23.5
Q ss_pred ChhhHHHHHcCC-HHHHHHHHHHHHHHHHH
Q 033674 1 MYDSLRKTWTTK-GEEQEAAKKEFFEVLKT 29 (114)
Q Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~ 29 (114)
++.|+..+|.++ ++..++..+-+...|+.
T Consensus 4 LYaaiFGvFmsS~DdDFnnFI~VVksVLtd 33 (71)
T PHA02819 4 LYSAIFGVFMSSSDDDFNNFINVVKSVLNN 33 (71)
T ss_pred HHHHHHHhhhCCchhHHHHHHHHHHHHHcC
Confidence 356788888888 88888888888888877
No 81
>PF07862 Nif11: Nitrogen fixation protein of unknown function; InterPro: IPR012903 This domain is found in the cyanobacteria, and the nitrogen-fixing proteobacterium Azotobacter vinelandii and may be involved in nitrogen fixation, but no role has been assigned [].
Probab=39.23 E-value=32 Score=17.09 Aligned_cols=23 Identities=9% Similarity=0.172 Sum_probs=18.5
Q ss_pred chHHHHHHHHhcChhhhhhcCCh
Q 033674 75 PKFIAWVKRCLQRETVAKALPDG 97 (114)
Q Consensus 75 p~l~~~~~~~~~~p~~~~~~~~~ 97 (114)
..+.+++.++.+.|.++.-+..+
T Consensus 4 ~~l~~Fl~~~~~d~~l~~~l~~~ 26 (49)
T PF07862_consen 4 ESLKAFLEKVKSDPELREQLKAC 26 (49)
T ss_pred HHHHHHHHHHhcCHHHHHHHHhc
Confidence 45889999999999999866543
No 82
>PHA02692 hypothetical protein; Provisional
Probab=38.16 E-value=59 Score=17.95 Aligned_cols=28 Identities=14% Similarity=0.222 Sum_probs=19.0
Q ss_pred ChhhHHHHHcCC-HHHHHHHHHHHHHHHH
Q 033674 1 MYDSLRKTWTTK-GEEQEAAKKEFFEVLK 28 (114)
Q Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~ 28 (114)
++.++..+|.++ ++..++..+-+...++
T Consensus 4 LyaaifGVFmss~DdDF~~Fi~vVksVLt 32 (70)
T PHA02692 4 LYAGVFGSFLSNSDEDFEEFLNIVRTVMT 32 (70)
T ss_pred HHHHHHHhhcCCCHHHHHHHHHHHHHHHc
Confidence 356788888888 6677666665555544
No 83
>PRK15371 effector protein YopJ; Provisional
Probab=36.77 E-value=59 Score=23.14 Aligned_cols=66 Identities=15% Similarity=0.251 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHh
Q 033674 17 EAAKKEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCL 85 (114)
Q Consensus 17 ~~~~~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~ 85 (114)
+...+++...++.||+.+..+.|+ .+.++..|+-..|.+--..= .+.++.++ .-+-.-..++..+.
T Consensus 22 ~~~~~~L~~~i~~le~~~~~G~~~-~~~~~~~Di~~lp~lv~~~N-~r~P~LNL-~~f~s~~~f~~aik 87 (287)
T PRK15371 22 EISNEELKNIITQLEDDIADGSWI-HKNYARTDLEVMPALVAQAN-NKYPEMNL-KLVTSPLDLSIEIK 87 (287)
T ss_pred hhhHHHHHHHHHHHHHHHHcCCCC-CchhHHhhHHhhHHHHHHHh-ccCCCCCe-eecCCHHHHHHHHH
Confidence 356788999999999999888777 55689999988887643221 13445554 33334444444444
No 84
>PF12575 DUF3753: Protein of unknown function (DUF3753); InterPro: IPR009175 This group represents an uncharacterised conserved protein belonging to poxvirus family I2.
Probab=34.13 E-value=74 Score=17.71 Aligned_cols=28 Identities=11% Similarity=0.171 Sum_probs=19.5
Q ss_pred hhhHHHHHcCC-HHHHHHHHHHHHHHHHH
Q 033674 2 YDSLRKTWTTK-GEEQEAAKKEFFEVLKT 29 (114)
Q Consensus 2 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~~ 29 (114)
..++..+|.+. ++..++..+.+...++.
T Consensus 5 yaaifGvFmss~ddDf~~Fi~vVksVltd 33 (72)
T PF12575_consen 5 YAAIFGVFMSSSDDDFNNFINVVKSVLTD 33 (72)
T ss_pred HHHHHhhhcCCCHHHHHHHHHHHHHHHcC
Confidence 46778888887 77777777766665553
No 85
>PHA03054 IMV membrane protein; Provisional
Probab=30.72 E-value=99 Score=17.13 Aligned_cols=27 Identities=11% Similarity=0.129 Sum_probs=17.6
Q ss_pred hhhHHHHHcCC-HHHHHHHHHHHHHHHH
Q 033674 2 YDSLRKTWTTK-GEEQEAAKKEFFEVLK 28 (114)
Q Consensus 2 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~ 28 (114)
+.++..+|.++ ++..++..+-+...++
T Consensus 5 ya~ifGvF~ss~d~Df~~Fi~vV~sVl~ 32 (72)
T PHA03054 5 YAAIFGVFMGSPEDDLTDFIEIVKSVLS 32 (72)
T ss_pred HHHHHHHhhCCchHHHHHHHHHHHHHHc
Confidence 56778888887 6666666655555443
No 86
>TIGR03798 ocin_TIGR03798 bacteriocin propeptide, TIGR03798 family. This model describes a conserved, fairly long (about 65 residue) propeptide region for a family of putative microcins, that is, bacteriocins of small size. Members of the seed alignment tend to have the Gly-Gly motif as the last two residues of the matched region. This is a cleavage site for a combination processing/export ABC transporter with a peptidase domain.
Probab=30.53 E-value=71 Score=16.91 Aligned_cols=23 Identities=9% Similarity=0.223 Sum_probs=18.2
Q ss_pred chHHHHHHHHhcChhhhhhcCCh
Q 033674 75 PKFIAWVKRCLQRETVAKALPDG 97 (114)
Q Consensus 75 p~l~~~~~~~~~~p~~~~~~~~~ 97 (114)
..+.+++.++.+.|.++.-+...
T Consensus 2 e~l~~Fl~~~~~d~~L~~~l~~~ 24 (64)
T TIGR03798 2 EQLKAFLEKVKTDPDLREKLKAA 24 (64)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHc
Confidence 45788999999999998866553
No 87
>cd06891 PX_Vps17p The phosphoinositide binding Phox Homology domain of yeast sorting nexin Vps17p. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Vsp17p forms a dimer with Vps5p, the yeast counterpart of human SNX1, and is part of the retromer complex that mediates the transport of the carboxypeptidase Y receptor Vps10p from endosomes to Golgi. Similar to Vps5p and SNX1, Vps17p harbors a Bin/Amphiphysin/Rvs (BAR) domain, which detects membrane curvatur
Probab=29.72 E-value=42 Score=21.17 Aligned_cols=18 Identities=11% Similarity=0.296 Sum_probs=14.9
Q ss_pred CchHHHHHHHHhcChhhh
Q 033674 74 CPKFIAWVKRCLQRETVA 91 (114)
Q Consensus 74 ~p~l~~~~~~~~~~p~~~ 91 (114)
--.|+.|++++.++|.+.
T Consensus 111 r~~LqrfL~RV~~hP~L~ 128 (140)
T cd06891 111 KANLQRWFNRVCSDPILI 128 (140)
T ss_pred HHHHHHHHHHHhCChhhc
Confidence 456899999999999654
No 88
>PF09236 AHSP: Alpha-haemoglobin stabilising protein; InterPro: IPR015317 Alpha-haemoglobin stabilising protein (AHSP) acts a molecular chaperone for free alpha-haemoglobin, preventing the harmful aggregation of alpha-haemoglobin during normal erythroid cell development: it specifically protects free alpha-haemoglobin from precipitation. AHSP adopts a helical secondary structure consisting of an elongated antiparallel three alpha-helix bundle []. ; GO: 0030492 hemoglobin binding, 0006457 protein folding, 0020027 hemoglobin metabolic process, 0030097 hemopoiesis, 0050821 protein stabilization; PDB: 1Y01_A 1XZY_A 3OVU_A 1W0A_A 3IA3_C 1Z8U_A 1W0B_A 1W09_A.
Probab=29.05 E-value=1.2e+02 Score=17.45 Aligned_cols=25 Identities=36% Similarity=0.399 Sum_probs=15.6
Q ss_pred HHHcCCHHHHHHHHHHHHHHHHHHH
Q 033674 7 KTWTTKGEEQEAAKKEFFEVLKTLE 31 (114)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~l~~le 31 (114)
+-..+.+...+++.+.++..|..+.
T Consensus 50 ~~~~GeqqeqdrAlqel~qeL~tla 74 (89)
T PF09236_consen 50 KQMTGEQQEQDRALQELQQELNTLA 74 (89)
T ss_dssp TT--SSHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCChHHHHHHHHHHHHHHHHHH
Confidence 3333446667788888888777663
No 89
>PF03421 YopJ: YopJ Serine/Threonine acetyltransferase; InterPro: IPR005083 The infection of mammalian host cells by Yersinia sp. causes a rapid induction of the mitogen-activated protein kinase (MAPK; including the ERK, JNK and p38 pathways) and nuclear factor kappaB (NF-kappaB) signalling pathways that would typically result in cytokine production and initiation of the innate immune response. However, these pathways are rapidly inhibited promoting apoptosis. YopJ has been shown to block phosphorylation of active site residues []. It has also been shown that YopJ acetyltransferase is activated by eukaryotic host cell inositol hexakisphosphate []. Serine and threonine acetylation is yet another complication to the control of signalling pathways and may be a may be a widespread mode of biochemical regulation of endogenous processes in eukaryotic cells. It has been shown that YopJ is a serine/threonine acetyltransferase []. It acetylates the serine and threonine residues in the phosphorylation sites of MAPK kinases and nuclear factor kappaB, preventing their activation by phosphorylation and the inhibition of these signalling pathways []. This entry contains YopJ and related proteins.
Probab=27.11 E-value=1.1e+02 Score=20.07 Aligned_cols=62 Identities=11% Similarity=0.180 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHhHHHHHHHhhhhcCCCccccCchHHHHHHHHh
Q 033674 21 KEFFEVLKTLEGQLGDKPFFGGDNFGYVDLSLIPFYCWFYTYETCGKFNVEAECPKFIAWVKRCL 85 (114)
Q Consensus 21 ~~~~~~l~~le~~l~~~~~l~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~~~p~l~~~~~~~~ 85 (114)
+.+....+.++..+..+.|. .+.++..|+-..|.+--..= .+.++.++ .-+..-..+...+.
T Consensus 2 ~~L~~y~~~~~~~~~~g~~~-~~~~~~~D~~~lp~lv~~~N-~r~P~LnL-~~~~~~~~~~~~i~ 63 (177)
T PF03421_consen 2 ESLKEYIERLEDDIKNGSWP-NESYAELDIKMLPALVAAEN-ARYPGLNL-HFFDSPEDFVQAIK 63 (177)
T ss_pred hHHHHHHHHHHHHHHhCCCC-CcchhhhhHHHHHHHHHHHh-hcCCCCce-EEcCCcHHHHHHHH
Confidence 45778888999999888877 67899999998887754321 13445554 33334455555553
No 90
>PF00392 GntR: Bacterial regulatory proteins, gntR family; InterPro: IPR000524 Many bacterial transcription regulation proteins bind DNA through a helix-turn-helix (HTH) motif, which can be classified into subfamilies on the basis of sequence similarities. The HTH GntR family has many members distributed among diverse bacterial groups that regulate various biological processes. It was named GntR after the Bacillus subtilis repressor of the gluconate operon []. Family members include GntR, HutC, KorA, NtaR, FadR, ExuR, FarR, DgoR and PhnF. The crystal structure of the FadR protein has been determined []. In general, these proteins contain a DNA-binding HTH domain at the N terminus, and an effector-binding or oligomerisation domain at the C terminus (IPR011711 from INTERPRO). The DNA-binding domain is well conserved in structure for the whole of the GntR family, consisting of a 3-helical bundle core with a small beta-sheet (wing); the GntR winged helix structure is similar to that found in several other transcriptional regulator families. The regions outside the DNA-binding domain are more variable and are consequently used to define GntR subfamilies []. This entry represents the N-terminal DNA-binding domain of the GntR family.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 1HW1_B 1H9T_A 1HW2_A 1H9G_A 1E2X_A 3IHU_A 3C7J_A 2RA5_A 3BY6_C 3IC7_A ....
Probab=26.64 E-value=71 Score=16.62 Aligned_cols=28 Identities=14% Similarity=0.196 Sum_probs=17.6
Q ss_pred HHHHHHHhhhCCCCcccCCCC-ChhhHHH
Q 033674 25 EVLKTLEGQLGDKPFFGGDNF-GYVDLSL 52 (114)
Q Consensus 25 ~~l~~le~~l~~~~~l~G~~~-s~aD~~l 52 (114)
...+.|.+.+..+.|-.|+.+ |..+++-
T Consensus 4 ~i~~~l~~~I~~g~~~~g~~lps~~~la~ 32 (64)
T PF00392_consen 4 QIYDQLRQAILSGRLPPGDRLPSERELAE 32 (64)
T ss_dssp HHHHHHHHHHHTTSS-TTSBE--HHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCCEeCCHHHHHH
Confidence 455666666666667778887 8777754
No 91
>COG3433 Aryl carrier domain [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=25.50 E-value=82 Score=17.59 Aligned_cols=17 Identities=29% Similarity=0.415 Sum_probs=13.9
Q ss_pred cccCchHHHHHHHHhcC
Q 033674 71 EAECPKFIAWVKRCLQR 87 (114)
Q Consensus 71 ~~~~p~l~~~~~~~~~~ 87 (114)
..+.|.|.+|.+-+...
T Consensus 53 La~~PTl~aW~qLl~~~ 69 (74)
T COG3433 53 LAANPTLAAWWQLLSTR 69 (74)
T ss_pred HHhCccHHHHHHHHHhc
Confidence 57889999999887764
No 92
>PF08134 cIII: cIII protein family; InterPro: IPR012995 This family consists of the CIII family of regulatory proteins. The lambda CIII protein has 54 amino acids and it forms an amphipathic helix within its amino acid sequence. Lambda CIII stabilises the lambda CII protein and the host sigma factor 32, responsible for transcribing genes of the heat shock regulon [].
Probab=24.79 E-value=1e+02 Score=15.06 Aligned_cols=16 Identities=19% Similarity=0.140 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHHHHhh
Q 033674 18 AAKKEFFEVLKTLEGQ 33 (114)
Q Consensus 18 ~~~~~~~~~l~~le~~ 33 (114)
+.+.-+......||..
T Consensus 25 r~rrLIRaa~k~leal 40 (44)
T PF08134_consen 25 RIRRLIRAARKQLEAL 40 (44)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3344444555555543
No 93
>PF09966 DUF2200: Uncharacterized protein conserved in bacteria (DUF2200); InterPro: IPR014580 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.; PDB: 3C9P_A.
Probab=22.41 E-value=80 Score=19.05 Aligned_cols=29 Identities=24% Similarity=0.379 Sum_probs=16.4
Q ss_pred hhhHHHHHcCCHHHHHHHHHHHHHHHHHH
Q 033674 2 YDSLRKTWTTKGEEQEAAKKEFFEVLKTL 30 (114)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 30 (114)
|.++||.+.++.+.+-.-.+++.+.+.+|
T Consensus 7 FasVYp~yv~K~ErKgRt~~Evd~vi~WL 35 (111)
T PF09966_consen 7 FASVYPLYVAKAERKGRTKEEVDQVIRWL 35 (111)
T ss_dssp HHHHHHHHHHHHHHTT--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 67788888887444444444455544443
No 94
>TIGR03060 PS_II_psb29 photosystem II biogenesis protein Psp29. Psp29, originally designated sll1414 in Synechocystis 6803, is found universally in Cyanobacteria and in Arabidopsis. It was isolated and partially sequenced from purified photosystem II (PS II) in Synechocystis. While its function is unknown, mutant studies show an impairment in photosystem II biogenesis and/or stability, rather than in PS II core function.
Probab=21.10 E-value=2.3e+02 Score=19.33 Aligned_cols=24 Identities=17% Similarity=0.308 Sum_probs=14.0
Q ss_pred ChhhHHHHHcCCHHHHHHHHHHHH
Q 033674 1 MYDSLRKTWTTKGEEQEAAKKEFF 24 (114)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~ 24 (114)
||+|++.....+.+......+++.
T Consensus 76 IF~Alc~a~~~dp~~~r~dA~~l~ 99 (214)
T TIGR03060 76 LFDALCNSNGFDPEQLREDAKQLL 99 (214)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHH
Confidence 477888877776544444444333
Done!