Query 033675
Match_columns 114
No_of_seqs 14 out of 16
Neff 2.2
Searched_HMMs 29240
Date Mon Mar 25 07:53:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033675.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033675hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2be1_A Serine/threonine-protei 98.1 5.7E-06 1.9E-10 65.8 6.3 68 29-96 9-82 (339)
2 2hz6_A Endoplasmic reticulum t 97.4 0.00034 1.2E-08 52.5 5.9 64 29-93 8-71 (369)
3 3q7m_A Lipoprotein YFGL, BAMB; 97.2 0.0019 6.4E-08 46.5 8.2 66 29-95 102-167 (376)
4 4ggc_A P55CDC, cell division c 97.1 0.013 4.3E-07 39.5 10.7 79 33-111 38-119 (318)
5 3q7m_A Lipoprotein YFGL, BAMB; 97.1 0.0036 1.2E-07 45.0 8.5 65 29-94 52-126 (376)
6 2ad6_A Methanol dehydrogenase 96.7 0.0016 5.5E-08 52.9 5.0 53 29-81 474-528 (571)
7 2hz6_A Endoplasmic reticulum t 96.7 0.0037 1.3E-07 46.9 6.2 41 31-71 174-214 (369)
8 2ad6_A Methanol dehydrogenase 96.6 0.0077 2.6E-07 48.9 8.0 68 29-96 114-191 (571)
9 1sq9_A Antiviral protein SKI8; 96.5 0.037 1.3E-06 38.7 10.0 67 29-96 197-273 (397)
10 1kb0_A Quinohemoprotein alcoho 96.5 0.0088 3E-07 49.4 7.8 68 29-96 127-205 (677)
11 1flg_A Protein (quinoprotein e 96.5 0.0028 9.6E-08 51.8 4.6 37 29-65 496-532 (582)
12 3zwl_B Eukaryotic translation 96.4 0.058 2E-06 36.5 10.3 67 28-94 42-109 (369)
13 3vgz_A Uncharacterized protein 96.4 0.036 1.2E-06 37.9 9.4 65 29-93 51-123 (353)
14 1gxr_A ESG1, transducin-like e 96.4 0.061 2.1E-06 36.1 10.3 66 28-93 193-258 (337)
15 3no2_A Uncharacterized protein 96.4 0.011 3.8E-07 42.8 7.1 61 30-93 5-67 (276)
16 3zwl_B Eukaryotic translation 96.3 0.07 2.4E-06 36.1 10.2 64 29-92 85-153 (369)
17 1gxr_A ESG1, transducin-like e 96.3 0.082 2.8E-06 35.5 10.2 67 28-94 151-218 (337)
18 1yiq_A Quinohemoprotein alcoho 96.2 0.0043 1.5E-07 51.4 4.6 35 29-63 485-519 (689)
19 4aow_A Guanine nucleotide-bind 96.1 0.09 3.1E-06 35.6 9.9 65 28-93 225-289 (340)
20 1yiq_A Quinohemoprotein alcoho 96.1 0.014 4.7E-07 48.3 6.9 67 29-95 120-197 (689)
21 3hxj_A Pyrrolo-quinoline quino 96.1 0.07 2.4E-06 36.6 9.3 62 30-94 107-169 (330)
22 3v7d_B Cell division control p 96.0 0.085 2.9E-06 38.3 10.0 70 29-98 279-349 (464)
23 4gga_A P55CDC, cell division c 96.0 0.11 3.7E-06 38.0 10.5 66 33-98 118-186 (420)
24 2be1_A Serine/threonine-protei 95.9 0.0054 1.9E-07 48.7 3.6 34 29-62 110-143 (339)
25 1pby_B Quinohemoprotein amine 95.9 0.095 3.2E-06 35.3 9.2 62 32-93 3-68 (337)
26 1jmx_B Amine dehydrogenase; ox 95.8 0.17 5.8E-06 34.4 10.2 65 29-94 10-78 (349)
27 3i2n_A WD repeat-containing pr 95.8 0.069 2.4E-06 36.3 8.3 66 28-93 178-246 (357)
28 3mmy_A MRNA export factor; mRN 95.8 0.14 4.8E-06 34.6 9.7 66 28-93 96-163 (368)
29 1w6s_A Methanol dehydrogenase 95.8 0.033 1.1E-06 46.4 7.9 64 33-96 124-197 (599)
30 1w6s_A Methanol dehydrogenase 95.8 0.0094 3.2E-07 49.6 4.6 36 29-64 483-518 (599)
31 3k26_A Polycomb protein EED; W 95.7 0.14 4.7E-06 34.8 9.5 67 30-96 85-153 (366)
32 3no2_A Uncharacterized protein 95.7 0.063 2.2E-06 38.8 8.1 63 30-93 136-198 (276)
33 1kb0_A Quinohemoprotein alcoho 95.5 0.013 4.5E-07 48.4 4.6 36 29-64 487-522 (677)
34 3vl1_A 26S proteasome regulato 95.5 0.12 4E-06 36.6 8.9 68 28-95 149-217 (420)
35 4aez_A CDC20, WD repeat-contai 95.5 0.24 8.2E-06 35.8 10.7 65 30-94 103-169 (401)
36 1kv9_A Type II quinohemoprotei 95.4 0.033 1.1E-06 45.8 6.6 67 29-95 116-192 (668)
37 1kv9_A Type II quinohemoprotei 95.4 0.014 4.9E-07 47.9 4.5 36 29-64 468-503 (668)
38 1sq9_A Antiviral protein SKI8; 95.4 0.27 9.2E-06 34.3 10.1 71 27-97 242-329 (397)
39 1l0q_A Surface layer protein; 95.3 0.36 1.2E-05 33.8 10.7 65 29-93 42-108 (391)
40 3k26_A Polycomb protein EED; W 95.2 0.13 4.4E-06 34.9 7.9 65 29-93 127-195 (366)
41 1flg_A Protein (quinoprotein e 95.2 0.044 1.5E-06 44.8 6.5 66 29-94 116-197 (582)
42 1r5m_A SIR4-interacting protei 95.1 0.17 6E-06 34.9 8.5 66 29-95 258-324 (425)
43 3vgz_A Uncharacterized protein 95.1 0.24 8.2E-06 33.8 9.0 66 28-93 240-306 (353)
44 3gre_A Serine/threonine-protei 95.0 0.15 5.1E-06 36.7 8.3 65 29-93 181-248 (437)
45 1yfq_A Cell cycle arrest prote 95.0 0.057 2E-06 36.8 5.8 52 28-81 261-315 (342)
46 2ovr_B FBW7, F-BOX/WD repeat p 95.0 0.35 1.2E-05 35.2 10.2 62 30-93 209-271 (445)
47 3odt_A Protein DOA1; ubiquitin 95.0 0.22 7.7E-06 33.1 8.5 61 32-93 238-299 (313)
48 3lrv_A PRE-mRNA-splicing facto 94.9 0.11 3.9E-06 36.7 7.3 64 29-93 181-247 (343)
49 2ynn_A Coatomer subunit beta'; 94.8 0.43 1.5E-05 33.4 9.9 67 27-93 22-89 (304)
50 1jmx_B Amine dehydrogenase; ox 94.8 0.43 1.5E-05 32.4 9.5 61 29-93 266-328 (349)
51 3v7d_B Cell division control p 94.7 0.44 1.5E-05 34.5 10.0 67 29-97 321-388 (464)
52 2ovr_B FBW7, F-BOX/WD repeat p 94.6 0.31 1.1E-05 35.5 9.1 65 29-95 248-313 (445)
53 1l0q_A Surface layer protein; 94.6 0.76 2.6E-05 32.2 10.7 64 29-93 84-150 (391)
54 3mmy_A MRNA export factor; mRN 94.6 0.17 5.8E-06 34.2 7.2 56 27-82 282-339 (368)
55 4ery_A WD repeat-containing pr 94.6 0.7 2.4E-05 31.7 10.7 68 27-94 201-272 (312)
56 3odt_A Protein DOA1; ubiquitin 94.5 0.62 2.1E-05 30.9 10.8 62 33-95 198-260 (313)
57 3vl1_A 26S proteasome regulato 94.5 0.27 9.1E-06 34.7 8.3 67 27-93 256-325 (420)
58 4a11_B DNA excision repair pro 94.4 0.3 1E-05 33.6 8.2 67 29-95 55-136 (408)
59 1erj_A Transcriptional repress 94.3 0.47 1.6E-05 34.6 9.5 67 28-94 133-200 (393)
60 1p22_A F-BOX/WD-repeat protein 94.3 0.55 1.9E-05 34.3 9.8 66 29-96 265-331 (435)
61 1r5m_A SIR4-interacting protei 94.2 0.51 1.8E-05 32.5 9.1 66 28-94 118-184 (425)
62 3hxj_A Pyrrolo-quinoline quino 94.2 0.36 1.2E-05 33.0 8.3 60 29-93 146-206 (330)
63 1p22_A F-BOX/WD-repeat protein 94.2 0.73 2.5E-05 33.7 10.3 65 29-95 142-207 (435)
64 2aq5_A Coronin-1A; WD40 repeat 94.1 0.9 3.1E-05 32.6 10.5 64 31-94 145-211 (402)
65 4g56_B MGC81050 protein; prote 94.0 0.29 9.9E-06 35.5 7.9 58 32-90 284-343 (357)
66 4aez_A CDC20, WD repeat-contai 94.0 0.75 2.5E-05 33.2 9.9 68 28-95 227-298 (401)
67 4a11_B DNA excision repair pro 93.9 1 3.5E-05 31.0 11.2 65 29-93 111-178 (408)
68 3frx_A Guanine nucleotide-bind 93.8 0.48 1.6E-05 33.5 8.5 52 28-80 206-257 (319)
69 1pby_B Quinohemoprotein amine 93.8 0.72 2.4E-05 31.0 8.9 60 30-93 252-313 (337)
70 4ery_A WD repeat-containing pr 93.7 1.1 3.7E-05 30.7 11.0 66 28-93 117-183 (312)
71 4gqb_B Methylosome protein 50; 93.7 0.58 2E-05 34.3 9.1 67 28-94 137-205 (344)
72 1pgu_A Actin interacting prote 93.7 0.56 1.9E-05 34.6 8.9 64 30-94 219-287 (615)
73 3ow8_A WD repeat-containing pr 93.7 1.3 4.3E-05 31.7 10.6 67 28-94 174-241 (321)
74 4g56_B MGC81050 protein; prote 93.6 0.7 2.4E-05 33.5 9.3 66 28-94 149-217 (357)
75 3ei3_B DNA damage-binding prot 93.6 0.53 1.8E-05 33.2 8.4 62 32-93 219-285 (383)
76 3jrp_A Fusion protein of prote 93.5 0.61 2.1E-05 31.7 8.3 65 28-92 21-90 (379)
77 4h5i_A Guanine nucleotide-exch 93.4 0.48 1.7E-05 34.6 8.2 62 27-88 278-341 (365)
78 4gga_A P55CDC, cell division c 93.4 0.85 2.9E-05 33.2 9.4 66 27-93 156-221 (420)
79 1k8k_C P40, ARP2/3 complex 41 93.4 0.4 1.4E-05 32.8 7.2 64 28-92 212-278 (372)
80 1got_B GT-beta; complex (GTP-b 93.3 1.1 3.9E-05 31.7 9.8 66 28-93 194-260 (340)
81 3f3f_A Nucleoporin SEH1; struc 93.3 0.67 2.3E-05 30.5 8.0 64 30-93 71-146 (351)
82 3u4y_A Uncharacterized protein 93.3 1.3 4.4E-05 30.2 10.0 65 28-93 49-120 (331)
83 2pm9_A Protein WEB1, protein t 93.0 1.3 4.4E-05 30.9 9.5 63 30-92 178-251 (416)
84 3jrp_A Fusion protein of prote 92.9 0.67 2.3E-05 31.5 7.8 64 29-92 171-242 (379)
85 3ei3_B DNA damage-binding prot 92.9 1.6 5.3E-05 30.7 9.9 62 29-91 174-237 (383)
86 1k8k_C P40, ARP2/3 complex 41 92.9 1.5 5.1E-05 30.0 9.7 67 28-94 152-237 (372)
87 4gqb_B Methylosome protein 50; 92.9 0.68 2.3E-05 34.0 8.4 64 30-93 227-292 (344)
88 3bws_A Protein LP49; two-domai 92.8 1.4 4.8E-05 31.3 9.7 66 28-93 263-337 (433)
89 3lrv_A PRE-mRNA-splicing facto 92.8 0.76 2.6E-05 32.4 8.3 65 29-94 138-205 (343)
90 3vu4_A KMHSV2; beta-propeller 92.8 0.88 3E-05 32.8 8.7 64 28-91 205-272 (355)
91 2aq5_A Coronin-1A; WD40 repeat 92.7 1.3 4.6E-05 31.7 9.5 69 29-97 93-170 (402)
92 1erj_A Transcriptional repress 92.7 1.1 3.6E-05 32.7 9.1 66 28-93 175-241 (393)
93 3i2n_A WD repeat-containing pr 92.7 1.3 4.4E-05 30.0 8.9 67 28-94 127-203 (357)
94 4h5i_A Guanine nucleotide-exch 92.7 2.2 7.4E-05 31.1 10.8 51 29-80 144-197 (365)
95 2xzm_R RACK1; ribosome, transl 92.7 1.5 5.1E-05 31.0 9.6 62 28-89 86-148 (343)
96 1yfq_A Cell cycle arrest prote 92.6 0.64 2.2E-05 31.5 7.4 66 29-94 22-93 (342)
97 4ggc_A P55CDC, cell division c 92.6 1.5 5.2E-05 29.2 9.5 40 27-66 76-115 (318)
98 2pm9_A Protein WEB1, protein t 92.5 1.1 3.6E-05 31.4 8.5 65 29-93 274-340 (416)
99 3bws_A Protein LP49; two-domai 92.5 0.71 2.4E-05 32.8 7.7 63 30-93 181-246 (433)
100 3ow8_A WD repeat-containing pr 92.4 2.2 7.4E-05 30.4 10.8 66 29-94 91-157 (321)
101 2pbi_B Guanine nucleotide-bind 92.1 2.3 8E-05 30.6 10.2 64 30-93 210-274 (354)
102 3gre_A Serine/threonine-protei 92.0 0.77 2.6E-05 32.9 7.5 66 28-93 224-295 (437)
103 3mkq_A Coatomer beta'-subunit; 91.9 2.3 7.9E-05 33.0 10.5 68 27-94 22-90 (814)
104 2vdu_B TRNA (guanine-N(7)-)-me 91.7 0.75 2.5E-05 33.9 7.3 63 30-93 210-274 (450)
105 1got_B GT-beta; complex (GTP-b 91.6 2.6 9E-05 29.8 10.7 65 28-93 236-304 (340)
106 3dm0_A Maltose-binding peripla 91.5 0.69 2.3E-05 36.4 7.4 65 28-93 571-635 (694)
107 2pbi_B Guanine nucleotide-bind 91.4 2.9 0.0001 30.1 10.8 66 29-94 165-233 (354)
108 3f3f_A Nucleoporin SEH1; struc 91.3 1 3.5E-05 29.6 6.9 64 28-91 21-91 (351)
109 3mkq_A Coatomer beta'-subunit; 91.1 4.1 0.00014 31.6 11.2 66 29-94 197-263 (814)
110 1pgu_A Actin interacting prote 91.1 1.3 4.3E-05 32.7 8.0 66 27-92 497-574 (615)
111 1vyh_C Platelet-activating fac 91.0 3.6 0.00012 30.3 10.9 65 29-93 203-268 (410)
112 3dwl_C Actin-related protein 2 90.9 0.87 3E-05 31.7 6.6 65 29-93 157-239 (377)
113 2xzm_R RACK1; ribosome, transl 90.8 1.4 4.8E-05 31.2 7.8 64 28-92 223-287 (343)
114 4aow_A Guanine nucleotide-bind 90.3 2.9 0.0001 28.1 9.9 64 30-93 185-249 (340)
115 1vyh_C Platelet-activating fac 89.4 5 0.00017 29.5 11.6 63 30-93 308-372 (410)
116 2ojh_A Uncharacterized protein 89.3 2.4 8.2E-05 27.3 7.3 61 36-97 18-79 (297)
117 3sfz_A APAF-1, apoptotic pepti 88.9 4.2 0.00014 33.8 10.1 65 28-93 1013-1077(1249)
118 3dw8_B Serine/threonine-protei 88.6 2.8 9.7E-05 29.6 7.9 62 31-93 240-319 (447)
119 3dwl_C Actin-related protein 2 88.5 2.2 7.5E-05 29.7 7.2 65 28-92 65-133 (377)
120 3sfz_A APAF-1, apoptotic pepti 88.0 6.7 0.00023 32.5 10.8 65 29-94 626-692 (1249)
121 2z3z_A Dipeptidyl aminopeptida 87.9 3.6 0.00012 31.8 8.7 66 30-96 91-161 (706)
122 4e54_B DNA damage-binding prot 87.5 4.6 0.00016 29.6 8.7 69 29-97 131-203 (435)
123 2ynn_A Coatomer subunit beta'; 87.5 5.6 0.00019 27.6 10.5 66 29-94 197-263 (304)
124 3frx_A Guanine nucleotide-bind 86.5 6.7 0.00023 27.5 10.0 61 28-88 75-136 (319)
125 3dm0_A Maltose-binding peripla 86.0 7.1 0.00024 30.7 9.6 62 28-89 440-502 (694)
126 3dsm_A Uncharacterized protein 85.6 8.1 0.00028 27.7 9.7 66 29-94 139-216 (328)
127 3jro_A Fusion protein of prote 85.5 1.5 5.2E-05 35.6 5.7 64 29-92 169-240 (753)
128 3jro_A Fusion protein of prote 85.3 4 0.00014 33.2 8.1 65 28-92 19-88 (753)
129 3iz6_a 40S ribosomal protein R 85.2 5.9 0.0002 28.6 8.2 61 27-87 307-372 (380)
130 3iz6_a 40S ribosomal protein R 83.9 10 0.00034 27.4 10.4 67 28-94 259-333 (380)
131 2ojh_A Uncharacterized protein 83.5 6.8 0.00023 25.2 8.2 62 34-96 56-125 (297)
132 3u4y_A Uncharacterized protein 83.0 8.8 0.0003 26.0 10.2 63 30-93 9-74 (331)
133 2vdu_B TRNA (guanine-N(7)-)-me 82.7 8 0.00027 28.4 8.1 61 33-93 118-183 (450)
134 1nr0_A Actin interacting prote 82.3 8.3 0.00028 30.0 8.5 66 28-93 200-273 (611)
135 3dw8_B Serine/threonine-protei 82.3 8.4 0.00029 27.2 7.8 67 27-93 37-129 (447)
136 1nir_A Nitrite reductase; hemo 82.2 12 0.00042 29.6 9.6 60 32-93 151-214 (543)
137 2oit_A Nucleoporin 214KDA; NH2 81.9 9.6 0.00033 29.1 8.5 63 30-93 162-225 (434)
138 2oaj_A Protein SNI1; WD40 repe 81.7 9.9 0.00034 32.2 9.3 65 28-93 27-91 (902)
139 2xyi_A Probable histone-bindin 81.1 12 0.00041 27.5 8.5 64 29-92 243-311 (430)
140 3dsm_A Uncharacterized protein 81.0 13 0.00044 26.6 8.9 72 31-104 95-176 (328)
141 3m8t_A 'BLR6230 protein; subcl 79.7 0.38 1.3E-05 34.1 0.1 14 1-14 1-14 (294)
142 3fm0_A Protein CIAO1; WDR39,SG 75.5 19 0.00065 25.5 8.2 64 28-91 71-137 (345)
143 2xyi_A Probable histone-bindin 75.1 16 0.00055 26.7 7.7 59 32-90 292-353 (430)
144 3vu4_A KMHSV2; beta-propeller 73.1 4.9 0.00017 28.9 4.5 36 30-65 71-106 (355)
145 1nir_A Nitrite reductase; hemo 70.9 32 0.0011 27.2 9.1 66 27-93 187-260 (543)
146 2l4j_A YES-associated protein 70.8 9.1 0.00031 22.5 4.6 37 19-55 3-39 (46)
147 1z68_A Fibroblast activation p 69.8 15 0.0005 28.6 6.7 54 39-95 89-144 (719)
148 2ghs_A AGR_C_1268P; regucalcin 69.2 15 0.00053 26.2 6.3 62 30-94 61-122 (326)
149 3sob_L Antibody light chain; b 69.1 3 0.0001 27.3 2.3 57 1-57 1-61 (237)
150 2ez5_W Dnedd4, E3 ubiquitin-pr 68.9 9 0.00031 22.5 4.2 34 22-55 5-38 (46)
151 2pm7_B Protein transport prote 66.5 29 0.00098 23.9 7.9 65 28-92 19-88 (297)
152 2hqs_A Protein TOLB; TOLB, PAL 66.2 38 0.0013 25.1 10.0 68 28-96 188-262 (415)
153 1ri6_A Putative isomerase YBHE 65.2 27 0.00094 23.2 8.0 66 28-93 93-164 (343)
154 1xd5_A Gastrodianin-1, antifun 65.1 24 0.00084 22.6 6.7 22 32-55 52-73 (112)
155 2oaj_A Protein SNI1; WD40 repe 64.8 25 0.00086 29.8 7.7 63 30-93 164-245 (902)
156 2dpf_A Curculin; sweet taste, 64.2 16 0.00053 23.7 5.1 23 32-55 53-75 (115)
157 3pe7_A Oligogalacturonate lyas 64.2 33 0.0011 23.8 8.8 70 27-96 89-183 (388)
158 3pe7_A Oligogalacturonate lyas 63.8 34 0.0011 23.7 8.1 65 32-96 50-117 (388)
159 3bg1_A Protein SEC13 homolog; 62.0 37 0.0013 23.6 7.4 64 29-92 24-92 (316)
160 1pjx_A Dfpase, DIISOPROPYLFLUO 61.2 34 0.0012 22.9 9.6 57 37-96 43-106 (314)
161 3g4e_A Regucalcin; six bladed 60.6 32 0.0011 23.9 6.5 64 29-95 24-87 (297)
162 2ysf_A E3 ubiquitin-protein li 60.6 15 0.0005 20.8 3.9 31 25-55 5-35 (40)
163 1b2p_A Protein (lectin); manno 60.6 26 0.00089 23.1 5.8 22 33-55 64-85 (119)
164 3c5m_A Oligogalacturonate lyas 60.5 38 0.0013 23.2 7.6 64 33-96 51-117 (396)
165 2ecf_A Dipeptidyl peptidase IV 60.2 55 0.0019 25.3 8.3 63 29-91 47-139 (741)
166 2dg1_A DRP35, lactonase; beta 60.0 38 0.0013 23.1 9.9 61 34-94 60-125 (333)
167 4e54_B DNA damage-binding prot 59.8 23 0.00078 25.9 5.8 56 39-94 377-434 (435)
168 2oit_A Nucleoporin 214KDA; NH2 59.3 36 0.0012 25.8 7.1 26 27-53 201-226 (434)
169 3sjl_D Methylamine dehydrogena 59.2 55 0.0019 26.1 8.4 66 27-93 145-212 (386)
170 2j04_A TAU60, YPL007P, hypothe 57.4 44 0.0015 28.8 8.0 64 27-92 138-213 (588)
171 1k32_A Tricorn protease; prote 57.3 54 0.0018 27.5 8.3 67 27-93 387-464 (1045)
172 1ri6_A Putative isomerase YBHE 56.3 41 0.0014 22.3 9.2 61 28-88 138-207 (343)
173 2ysh_A GAS-7, growth-arrest-sp 56.2 16 0.00056 20.2 3.6 32 26-57 6-37 (40)
174 2dmv_A Itchy homolog E3 ubiqui 56.1 18 0.00063 20.5 3.9 30 27-56 7-36 (43)
175 2j04_B YDR362CP, TAU91; beta p 55.4 39 0.0013 26.9 7.0 62 31-92 278-344 (524)
176 1nr0_A Actin interacting prote 55.0 72 0.0025 24.7 9.1 30 28-57 249-278 (611)
177 2w18_A PALB2, fancn, partner a 54.9 40 0.0014 27.2 7.0 62 32-93 194-272 (356)
178 3fm0_A Protein CIAO1; WDR39,SG 54.1 55 0.0019 23.1 8.3 65 27-91 25-93 (345)
179 1qks_A Cytochrome CD1 nitrite 53.6 20 0.0007 29.3 5.1 34 27-60 205-240 (567)
180 2ymu_A WD-40 repeat protein; u 52.6 66 0.0023 23.6 11.0 64 28-93 26-90 (577)
181 2pfu_A Biopolymer transport EX 51.8 22 0.00075 21.9 4.0 29 16-44 5-34 (99)
182 2ymu_A WD-40 repeat protein; u 50.4 73 0.0025 23.4 10.4 60 28-87 108-167 (577)
183 2ism_A Putative oxidoreductase 50.0 11 0.00038 28.1 2.9 20 29-48 31-50 (352)
184 2z3z_A Dipeptidyl aminopeptida 49.2 89 0.003 24.1 8.3 26 34-59 135-165 (706)
185 3hbr_A OXA-48; class D beta-la 48.9 2.1 7.2E-05 32.7 -1.3 52 1-53 1-55 (265)
186 3hx6_A Type 4 fimbrial biogene 48.5 51 0.0017 28.6 7.0 58 39-102 222-287 (570)
187 4a5s_A Dipeptidyl peptidase 4 47.8 76 0.0026 25.4 7.5 67 27-95 70-146 (740)
188 2law_A Yorkie homolog; YAP, SM 47.7 28 0.00097 19.3 3.7 21 35-55 14-34 (38)
189 4h3o_A Lectin; cadmium, plant 46.7 43 0.0015 21.6 5.0 33 30-64 19-51 (105)
190 1ymz_A CC45; artificial protei 46.4 27 0.00091 19.6 3.5 27 29-55 10-36 (43)
191 3o4h_A Acylamino-acid-releasin 44.7 76 0.0026 24.0 6.7 65 29-94 160-231 (582)
192 2ysg_A Syntaxin-binding protei 44.6 40 0.0014 18.8 4.1 28 28-55 8-35 (40)
193 1wr3_A Ubiquitin-protein ligas 44.2 34 0.0012 18.4 3.6 24 32-55 9-32 (36)
194 2oiz_A Aromatic amine dehydrog 44.1 51 0.0017 24.1 5.5 32 29-60 14-51 (361)
195 1w7f_A Beta-lactamase; hydrola 43.6 12 0.00042 27.4 2.2 23 40-63 61-83 (307)
196 4gq1_A NUP37; propeller, trans 43.4 43 0.0015 24.3 5.0 61 32-93 158-221 (393)
197 1wr7_A NEDD4-2; all-beta, liga 41.7 46 0.0016 18.6 4.1 27 29-55 10-36 (41)
198 2kyk_A E3 ubiquitin-protein li 40.5 39 0.0013 18.6 3.5 25 31-55 10-34 (39)
199 3c75_H MADH, methylamine dehyd 40.5 65 0.0022 25.8 6.1 74 17-93 69-161 (426)
200 2kpz_A E3 ubiquitin-protein li 40.3 33 0.0011 20.1 3.3 28 28-55 13-40 (49)
201 1e0m_A Wwprototype; SH3 protot 39.8 43 0.0015 17.9 3.6 26 31-56 7-32 (37)
202 2zaj_A Membrane-associated gua 39.7 59 0.002 19.3 4.9 31 26-56 12-42 (49)
203 1xfd_A DIP, dipeptidyl aminope 39.2 1.3E+02 0.0044 23.1 7.3 55 40-95 91-148 (723)
204 2ecf_A Dipeptidyl peptidase IV 39.2 1.3E+02 0.0043 23.3 7.3 61 34-95 123-186 (741)
205 2w18_A PALB2, fancn, partner a 39.0 1.1E+02 0.0037 24.6 7.2 52 34-85 299-352 (356)
206 3hun_A Penicillin-binding prot 38.9 7.3 0.00025 32.7 0.3 22 41-63 73-94 (453)
207 4gq1_A NUP37; propeller, trans 38.5 1.1E+02 0.0038 22.1 7.5 45 35-80 334-380 (393)
208 2yse_A Membrane-associated gua 37.3 67 0.0023 20.0 4.6 30 26-55 12-41 (60)
209 2hqs_A Protein TOLB; TOLB, PAL 37.0 1.3E+02 0.0043 22.3 9.1 66 30-96 278-350 (415)
210 3r0e_A Lectin; carbohydrate bi 36.9 56 0.0019 21.1 4.4 27 31-58 50-76 (109)
211 1z68_A Fibroblast activation p 36.7 79 0.0027 24.5 5.8 62 32-93 28-102 (719)
212 2yf1_A Major histocompatibilit 36.4 56 0.0019 25.2 5.0 30 23-52 34-64 (329)
213 1tk7_A CG4244-PB; WW domain, n 35.9 84 0.0029 20.0 5.2 32 28-59 13-44 (88)
214 1xfd_A DIP, dipeptidyl aminope 35.3 58 0.002 25.0 4.8 59 35-93 32-103 (723)
215 3dzw_A Agglutinin; lectin, man 35.0 64 0.0022 20.6 4.4 30 30-61 19-48 (109)
216 3sjl_D Methylamine dehydrogena 34.9 1.7E+02 0.0058 23.2 8.5 75 29-103 290-377 (386)
217 3a0c_A Mannose/sialic acid-bin 34.5 51 0.0017 21.2 3.8 29 31-61 21-49 (110)
218 2ysd_A Membrane-associated gua 34.2 81 0.0028 19.3 4.7 28 28-55 15-42 (57)
219 2ysb_A Salvador homolog 1 prot 32.9 78 0.0027 18.7 4.2 29 28-56 12-40 (49)
220 3a0c_A Mannose/sialic acid-bin 32.5 61 0.0021 20.8 4.0 22 33-55 54-75 (110)
221 1qks_A Cytochrome CD1 nitrite 32.4 2E+02 0.0069 23.3 8.7 57 32-89 168-226 (567)
222 3dzw_A Agglutinin; lectin, man 32.3 61 0.0021 20.7 3.9 25 33-58 53-77 (109)
223 3bx4_B Aggretin beta chain; to 32.1 9.7 0.00033 24.4 0.0 21 1-21 1-21 (146)
224 3e5z_A Putative gluconolactona 32.0 1.2E+02 0.004 20.5 9.5 62 32-94 42-103 (296)
225 2jxw_A WW domain-binding prote 31.3 92 0.0031 19.2 4.5 28 29-56 45-72 (75)
226 1wr4_A Ubiquitin-protein ligas 31.0 63 0.0021 17.0 3.8 22 34-55 11-32 (36)
227 3r0e_B Lectin; carbohydrate bi 29.3 89 0.0031 20.1 4.4 24 32-58 26-49 (110)
228 2iwa_A Glutamine cyclotransfer 28.8 1.8E+02 0.0063 21.7 8.5 63 30-93 75-138 (266)
229 2gop_A Trilobed protease; beta 28.8 1.4E+02 0.0047 20.3 8.4 51 41-93 86-164 (347)
230 2kxq_A E3 ubiquitin-protein li 28.6 1.1E+02 0.0038 19.5 4.7 32 27-58 9-40 (90)
231 3mez_B Mannose-specific lectin 28.3 1.2E+02 0.0042 19.5 6.8 33 29-61 23-55 (113)
232 2djy_A SMAD ubiquitination reg 28.1 87 0.003 17.8 4.2 26 30-55 10-35 (42)
233 4dyw_A MUTT/nudix family prote 28.1 32 0.0011 22.4 2.0 45 16-60 15-62 (157)
234 3scy_A Hypothetical bacterial 27.8 1.5E+02 0.0052 20.4 9.4 77 28-105 268-357 (361)
235 2a3m_A COG3005: nitrate/TMAO r 27.8 13 0.00043 25.4 0.0 20 1-20 1-21 (130)
236 3hx6_A Type 4 fimbrial biogene 26.0 39 0.0013 29.3 2.7 30 29-59 84-113 (570)
237 3bg1_A Protein SEC13 homolog; 25.9 1.7E+02 0.0057 20.3 7.9 60 30-89 71-135 (316)
238 2ysi_A Transcription elongatio 25.5 98 0.0033 17.5 4.0 26 30-55 10-35 (40)
239 1yu0_A Major tropism determina 25.4 1.9E+02 0.0064 24.2 6.6 67 28-105 61-131 (381)
240 2z2n_A Virginiamycin B lyase; 25.1 1.5E+02 0.005 19.3 9.4 61 31-93 26-89 (299)
241 2oiz_A Aromatic amine dehydrog 24.8 2E+02 0.0069 20.9 8.6 34 27-60 116-152 (361)
242 2l5f_A PRE-mRNA-processing fac 24.8 1E+02 0.0036 19.8 4.0 35 26-60 10-44 (92)
243 4a5s_A Dipeptidyl peptidase 4 24.4 2.7E+02 0.0093 22.2 7.5 64 30-94 26-105 (740)
244 3qho_A Endoglucanase, 458AA lo 23.2 78 0.0027 25.6 3.8 54 4-57 10-65 (458)
245 3c5m_A Oligogalacturonate lyas 23.1 1.8E+02 0.0063 19.8 7.8 30 27-56 89-118 (396)
246 1i5h_W Rnedd4, ubiquitin ligas 23.0 1.2E+02 0.0042 17.7 4.3 29 28-56 12-40 (50)
247 3mez_A Mannose-specific lectin 22.1 87 0.003 20.2 3.3 29 30-61 20-48 (111)
248 1o6w_A PRP40, PRE-mRNA process 21.8 71 0.0024 19.4 2.7 27 31-57 44-70 (75)
249 3ffv_A Protein SYD; membrane, 21.6 97 0.0033 23.3 3.8 25 29-53 128-154 (181)
250 2qzu_A Putative sulfatase YIDJ 21.6 49 0.0017 25.7 2.3 32 6-37 4-35 (491)
251 2jmf_A E3 ubiquitin-protein li 21.6 1.3E+02 0.0043 18.1 3.7 28 28-55 19-46 (53)
252 1mda_H Methylamine dehydrogena 21.3 1.8E+02 0.006 22.5 5.4 32 29-60 324-357 (368)
253 2dwv_A Salvador homolog 1 prot 21.0 1.4E+02 0.0047 17.6 3.8 30 28-57 14-43 (49)
254 2p4o_A Hypothetical protein; p 21.0 2.2E+02 0.0075 19.8 8.7 22 35-57 38-59 (306)
255 1b2p_A Protein (lectin); manno 20.8 82 0.0028 20.7 3.0 29 31-61 31-59 (119)
256 2bcf_A Probable D-alanyl-D-ala 20.4 2E+02 0.007 21.6 5.5 24 40-63 20-43 (276)
257 2pm7_B Protein transport prote 20.3 2.1E+02 0.0072 19.4 7.7 61 30-91 67-133 (297)
No 1
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=98.08 E-value=5.7e-06 Score=65.77 Aligned_cols=68 Identities=22% Similarity=0.323 Sum_probs=52.6
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecC--CC-eeeeeecCC-C-Cc-eeeeCCcceEeeeeccccceeee
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMG--KP-IYSSFTRND-P-DF-YVDVGEDWKLYFHRKGIGKMKDI 96 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStG--sP-IYSSYqA~~-~-~~-fidcgdDW~LY~h~~~~GK~kl~ 96 (114)
..++++|++.||+||.+|..+|+..|+|.++ +| +..+..+.. + .. .+++..|-+||..+..-|+.+..
T Consensus 9 ~~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~ 82 (339)
T 2be1_A 9 LSDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLP 82 (339)
T ss_dssp EEEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEE
T ss_pred eCCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEee
Confidence 3578999999999999999999999999997 44 444433332 2 23 35667999999999999977643
No 2
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.35 E-value=0.00034 Score=52.51 Aligned_cols=64 Identities=22% Similarity=0.384 Sum_probs=45.1
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
..++.++++.||+||.+|..+|+..|++.. +++.++-...+...|+-...|=.||.-+..-|+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~ 71 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEG 71 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCce
Confidence 678899999999999999999999999998 6666553333444566656777899998877776
No 3
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.20 E-value=0.0019 Score=46.51 Aligned_cols=66 Identities=17% Similarity=0.197 Sum_probs=52.3
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecCCCCceeeeCCcceEeeeeccccceee
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMKD 95 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~kl 95 (114)
..+..+|++.||.||.+|..+|+..|++..+.++.++-.+.+...|+-..+. .||.-+..-|+.+-
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v~v~~~~g-~l~~~d~~tG~~~W 167 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNG-QLQALNEADGAVKW 167 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEETTEEEEECTTS-EEEEEETTTCCEEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEECCEEEEEcCCC-eEEEEECCCCcEEE
Confidence 5678899999999999999999999999999887766555455556655443 79999988888743
No 4
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.07 E-value=0.013 Score=39.46 Aligned_cols=79 Identities=15% Similarity=0.090 Sum_probs=56.7
Q ss_pred eEEEeeCCeEEEEeCCCCeeeEEeec---CCCeeeeeecCCCCceeeeCCcceEeeeeccccceeeecccCCCceeeeec
Q 033675 33 ALVATLNGTVHLVDTKRGESRWSFSM---GKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMKDIMKSTTPNCYFTNF 109 (114)
Q Consensus 33 aLVatlDGTiYLVd~~s~r~~WSFSt---GsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~kl~~~s~~~~~~~~~~ 109 (114)
.|.++.||||+++|..+|+..-.+.- +.+|.+-.-.++...++-++.|=.+.+.+..-|+........+..+....+
T Consensus 38 ~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~ 117 (318)
T 4ggc_A 38 VLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW 117 (318)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred EEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec
Confidence 56677899999999999999887753 345665544445567888899999999999988885555444444444444
Q ss_pred cc
Q 033675 110 RG 111 (114)
Q Consensus 110 ~~ 111 (114)
.+
T Consensus 118 ~~ 119 (318)
T 4ggc_A 118 NS 119 (318)
T ss_dssp ET
T ss_pred CC
Confidence 33
No 5
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.06 E-value=0.0036 Score=45.02 Aligned_cols=65 Identities=17% Similarity=0.335 Sum_probs=51.3
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeec----------CCCeeeeeecCCCCceeeeCCcceEeeeecccccee
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSM----------GKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMK 94 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFSt----------GsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~k 94 (114)
..+..+|++.+|.||.+|..+|+..|++.. +.++.++..+.+...|+-..+. .||.-+..-||.+
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g-~l~a~d~~tG~~~ 126 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKA-QVYALNTSDGTVA 126 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTS-EEEEEETTTCCEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCC-EEEEEECCCCCEE
Confidence 567788999999999999999999999998 4556666555566667765543 7888888888873
No 6
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.75 E-value=0.0016 Score=52.86 Aligned_cols=53 Identities=26% Similarity=0.335 Sum_probs=40.8
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeec--CCCCceeeeCCcc
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTR--NDPDFYVDVGEDW 81 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA--~~~~~fidcgdDW 81 (114)
..++++|++.||+||.+|..+|++.|+|..|+++.++-.. .+..-|+-+.+.|
T Consensus 474 ~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~~~~G~ 528 (571)
T 2ad6_A 474 KGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIGSMYGV 528 (571)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECC
T ss_pred CCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEEEECCC
Confidence 4688999999999999999999999999999988755333 2333455554443
No 7
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=96.68 E-value=0.0037 Score=46.89 Aligned_cols=41 Identities=20% Similarity=0.354 Sum_probs=37.6
Q ss_pred CceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecCCC
Q 033675 31 DLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDP 71 (114)
Q Consensus 31 ~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~ 71 (114)
+..++++.||+|+.+|..+|+..|++..++|+.++|...+.
T Consensus 174 ~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~d 214 (369)
T 2hz6_A 174 MSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQRE 214 (369)
T ss_dssp CCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTS
T ss_pred ceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCC
Confidence 67889999999999999999999999999999999887644
No 8
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.60 E-value=0.0077 Score=48.87 Aligned_cols=68 Identities=12% Similarity=0.138 Sum_probs=51.8
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecCC-----CeeeeeecCCCCceeeeCC-----cceEeeeeccccceeee
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMGK-----PIYSSFTRNDPDFYVDVGE-----DWKLYFHRKGIGKMKDI 96 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStGs-----PIYSSYqA~~~~~fidcgd-----DW~LY~h~~~~GK~kl~ 96 (114)
..+.++|++.||.||.+|..+|++.|++..+. .+.++=.+.+...|+-+.. |-.+|..+..-||.+-.
T Consensus 114 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 191 (571)
T 2ad6_A 114 GAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWR 191 (571)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred ECCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEE
Confidence 56788999999999999999999999999876 3333322224445666553 78999999999998543
No 9
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.52 E-value=0.037 Score=38.67 Aligned_cols=67 Identities=15% Similarity=0.124 Sum_probs=55.0
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeec-------CCCeeeeeecCCCCceeeeCCc---ceEeeeeccccceeee
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSM-------GKPIYSSFTRNDPDFYVDVGED---WKLYFHRKGIGKMKDI 96 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFSt-------GsPIYSSYqA~~~~~fidcgdD---W~LY~h~~~~GK~kl~ 96 (114)
.. ..++++.||+|+++|..++++.+.|.. ..+|.+-.-.|+...++-+++| -.+++.+...|+....
T Consensus 197 ~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~ 273 (397)
T 1sq9_A 197 RG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGS 273 (397)
T ss_dssp TS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEE
T ss_pred Cc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccce
Confidence 44 788889999999999999999999998 8888876544566677888888 9999999888876333
No 10
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.48 E-value=0.0088 Score=49.39 Aligned_cols=68 Identities=13% Similarity=0.062 Sum_probs=50.5
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecC-C-----CeeeeeecCCCCceeeeCC-----cceEeeeeccccceeee
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMG-K-----PIYSSFTRNDPDFYVDVGE-----DWKLYFHRKGIGKMKDI 96 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStG-s-----PIYSSYqA~~~~~fidcgd-----DW~LY~h~~~~GK~kl~ 96 (114)
..+..+|++.||+||.+|..+|++.|+|..+ . ++.++-.+.+...|+-.+. |=.+|.-|..-||.+-.
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEE
Confidence 5778999999999999999999999999987 2 3333222224444554432 67899999999998543
No 11
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.46 E-value=0.0028 Score=51.83 Aligned_cols=37 Identities=32% Similarity=0.601 Sum_probs=34.0
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeee
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSS 65 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSS 65 (114)
..+++++++.||.|+.+|..+||.+|+|..++.+.++
T Consensus 496 agglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~ 532 (582)
T 1flg_A 496 AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSP 532 (582)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred CCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccC
Confidence 5789999999999999999999999999999988753
No 12
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.44 E-value=0.058 Score=36.53 Aligned_cols=67 Identities=15% Similarity=0.181 Sum_probs=53.4
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEee-cCCCeeeeeecCCCCceeeeCCcceEeeeecccccee
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFS-MGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMK 94 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFS-tGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~k 94 (114)
+.....++++.||+|++++..+++....+. ...+|.+---.++...++-++.|=.++.-+..-|+..
T Consensus 42 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 109 (369)
T 3zwl_B 42 KEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCV 109 (369)
T ss_dssp TTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEE
T ss_pred CCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 355677888899999999999999999997 4567766544445667888999989999888888773
No 13
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.44 E-value=0.036 Score=37.94 Aligned_cols=65 Identities=12% Similarity=0.077 Sum_probs=47.2
Q ss_pred CCCceEEEee-------CCeEEEEeCCCCeeeEEeecCCCeeeeeecCCCC-ceeeeCCcceEeeeeccccce
Q 033675 29 SGDLALVATL-------NGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPD-FYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 29 ~~~taLVatl-------DGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~~-~fidcgdDW~LY~h~~~~GK~ 93 (114)
..+..+|++. +|+|+++|..++++.+.+..+....+.--.++.. .|+-..+|=+++.-+..-|+.
T Consensus 51 dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~ 123 (353)
T 3vgz_A 51 QENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEV 123 (353)
T ss_dssp TTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCE
T ss_pred CCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCee
Confidence 4456677763 6799999999999999999876544332223333 577777777888888888876
No 14
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.42 E-value=0.061 Score=36.10 Aligned_cols=66 Identities=14% Similarity=0.049 Sum_probs=51.2
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
+.....++++.||+|+++|..++++...+...+++.+---.|+...++-+++|=.+++-+..-++.
T Consensus 193 ~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~ 258 (337)
T 1gxr_A 193 NDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK 258 (337)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE
T ss_pred CCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe
Confidence 356678888999999999999999999999999988653334545566666677777777766665
No 15
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.41 E-value=0.011 Score=42.81 Aligned_cols=61 Identities=10% Similarity=0.120 Sum_probs=43.9
Q ss_pred CCceEEEeeCCeEEEEeCCCCeeeEEeecCC--CeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 30 GDLALVATLNGTVHLVDTKRGESRWSFSMGK--PIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r~~WSFStGs--PIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
.++.++++-||+|+++|..+|++.|+|..+. ..++....|+...++ +++ =.++.-+. -||.
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~-~~V~~~d~-~G~~ 67 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYS-KGAKMITR-DGRE 67 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-ECB-SEEEEECT-TSCE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eCC-CCEEEECC-CCCE
Confidence 3566667789999999999999999999986 345554445445666 443 35777776 5665
No 16
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.33 E-value=0.07 Score=36.13 Aligned_cols=64 Identities=6% Similarity=0.093 Sum_probs=50.5
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecCCCCceeeeCCc-----ceEeeeeccccc
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPDFYVDVGED-----WKLYFHRKGIGK 92 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~~~fidcgdD-----W~LY~h~~~~GK 92 (114)
.....++++.||+|++++..+++....+..+.++.+---.++...++-+++| -.+++.+...++
T Consensus 85 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~ 153 (369)
T 3zwl_B 85 FTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDS 153 (369)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECT
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCc
Confidence 4567788899999999999999999999999999877555566677777776 666666655553
No 17
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.26 E-value=0.082 Score=35.47 Aligned_cols=67 Identities=12% Similarity=0.011 Sum_probs=52.8
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecCCCCceeeeCCcceEeeeecccccee
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMK 94 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~k 94 (114)
+.....++++.||+|++++..++++...+.. .+++.+---.|+...++-++.|-.++..+..-|+..
T Consensus 151 ~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~ 218 (337)
T 1gxr_A 151 PDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQL 218 (337)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceE
Confidence 3566788899999999999999999999974 556665433335567888889999999998888763
No 18
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.24 E-value=0.0043 Score=51.36 Aligned_cols=35 Identities=20% Similarity=0.425 Sum_probs=32.5
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCee
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIY 63 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIY 63 (114)
..+++++++.||+|+++|..+||++|+|..++.+.
T Consensus 485 agglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~ 519 (689)
T 1yiq_A 485 AGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVM 519 (689)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC
T ss_pred CCCEEEEECCCCcEEEEECCCCccceeeeCCCCcc
Confidence 67799999999999999999999999999987776
No 19
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.11 E-value=0.09 Score=35.60 Aligned_cols=65 Identities=12% Similarity=0.148 Sum_probs=51.1
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
+.....++|+.||+|.++|..++++...+..+.++.+..- +++..++-++.|=.+++.+..-++.
T Consensus 225 ~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~d~~i~iwd~~~~~~ 289 (340)
T 4aow_A 225 PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCF-SPNRYWLCAATGPSIKIWDLEGKII 289 (340)
T ss_dssp TTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEE-CSSSSEEEEEETTEEEEEETTTTEE
T ss_pred CCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeec-CCCCceeeccCCCEEEEEECCCCeE
Confidence 3556777889999999999999999999999998876543 4556677778887787777665544
No 20
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.10 E-value=0.014 Score=48.34 Aligned_cols=67 Identities=18% Similarity=0.203 Sum_probs=49.0
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecC-CCe--eeeeecC---CCCceeeeC-----CcceEeeeeccccceee
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMG-KPI--YSSFTRN---DPDFYVDVG-----EDWKLYFHRKGIGKMKD 95 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStG-sPI--YSSYqA~---~~~~fidcg-----dDW~LY~h~~~~GK~kl 95 (114)
..+.++|++.||+||.+|..+|++.|++..+ .+- |....+| ++..|+-++ .|=.+|.-|..-||.+-
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 197 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAW 197 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred ECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEE
Confidence 5678899999999999999999999999986 221 2221222 344455443 36789999999999843
No 21
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.09 E-value=0.07 Score=36.59 Aligned_cols=62 Identities=29% Similarity=0.525 Sum_probs=46.6
Q ss_pred CCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecC-CCCceeeeCCcceEeeeecccccee
Q 033675 30 GDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRN-DPDFYVDVGEDWKLYFHRKGIGKMK 94 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~-~~~~fidcgdDW~LY~h~~~~GK~k 94 (114)
.+...|++.+|.||.++.. |+..|++..+.++.++-... +...|+ +..+=.||.-+.. |+..
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~v-gt~~~~l~~~d~~-g~~~ 169 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYV-GSNDNYLYAINPD-GTEK 169 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEE-ECTTSEEEEECTT-SCEE
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEE-EcCCCEEEEECCC-CCEe
Confidence 6778889999999999999 99999999887765443333 444555 3445688888888 8763
No 22
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.03 E-value=0.085 Score=38.26 Aligned_cols=70 Identities=13% Similarity=0.211 Sum_probs=55.5
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecCCCCceeeeCCcceEeeeeccccceeeecc
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMKDIMK 98 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~kl~~~ 98 (114)
.+...++++.||+|+++|..++++...|.. ..+|++-.-.++...++-++.|=.+++.+..-|+......
T Consensus 279 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 349 (464)
T 3v7d_B 279 HGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQ 349 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEe
Confidence 456788999999999999999999999974 4567665444455678888999999999998888744443
No 23
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.00 E-value=0.11 Score=38.04 Aligned_cols=66 Identities=17% Similarity=0.102 Sum_probs=48.2
Q ss_pred eEEEeeCCeEEEEeCCCCeeeEEeec---CCCeeeeeecCCCCceeeeCCcceEeeeeccccceeeecc
Q 033675 33 ALVATLNGTVHLVDTKRGESRWSFSM---GKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMKDIMK 98 (114)
Q Consensus 33 aLVatlDGTiYLVd~~s~r~~WSFSt---GsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~kl~~~ 98 (114)
.|.+++|++||+|+..+|++.-.+.- +.+|.+--=.|+..+++-++.|=.+.+-+..-|+....+.
T Consensus 118 ~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~ 186 (420)
T 4gga_A 118 VLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT 186 (420)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred EEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEe
Confidence 46677899999999999998887753 3456554223355667788889888888888887744443
No 24
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.93 E-value=0.0054 Score=48.66 Aligned_cols=34 Identities=12% Similarity=0.173 Sum_probs=31.4
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCe
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMGKPI 62 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPI 62 (114)
..+++++++.||++|.+|..+|+++|+|+.|.|.
T Consensus 110 ~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~ 143 (339)
T 2be1_A 110 EDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKN 143 (339)
T ss_dssp CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBC
T ss_pred cCCEEEEEecCCEEEEEECCCCcEEEEEecCCCc
Confidence 5788999999999999999999999999999763
No 25
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=95.92 E-value=0.095 Score=35.31 Aligned_cols=62 Identities=13% Similarity=0.124 Sum_probs=47.0
Q ss_pred ceEEEeeCCeEEEEeCCCCeeeEEeecCC----CeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 32 LALVATLNGTVHLVDTKRGESRWSFSMGK----PIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 32 taLVatlDGTiYLVd~~s~r~~WSFStGs----PIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
..++++.||+|+++|..++++.+++..+. |..-.+....+..|+-+.++-+++.-+..-|+.
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~ 68 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGET 68 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCE
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCe
Confidence 45677889999999999999999998765 433333222334578888888999988887876
No 26
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=95.82 E-value=0.17 Score=34.37 Aligned_cols=65 Identities=17% Similarity=0.060 Sum_probs=46.8
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecCC--CeeeeeecC-CCC-ceeeeCCcceEeeeecccccee
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMGK--PIYSSFTRN-DPD-FYVDVGEDWKLYFHRKGIGKMK 94 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStGs--PIYSSYqA~-~~~-~fidcgdDW~LY~h~~~~GK~k 94 (114)
.....++++-||+|+++|..+++..+.+..+. ...+ .+.. +.. .|+-..++-+++.-+..-|+..
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~-~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~ 78 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGT-AMMAPDNRTAYVLNNHYGDIYGIDLDTCKNT 78 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCE-EEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCce-eEECCCCCEEEEEeCCCCcEEEEeCCCCcEE
Confidence 34445556789999999999999999998775 3222 2333 333 5777778889999988877763
No 27
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.81 E-value=0.069 Score=36.29 Aligned_cols=66 Identities=14% Similarity=0.119 Sum_probs=52.3
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecC---CCCceeeeCCcceEeeeeccccce
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRN---DPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~---~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
+.....++++.||+|+++|..+++..+......++.+---.| +...++-++.|-.+++.+..-++.
T Consensus 178 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 246 (357)
T 3i2n_A 178 QEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHP 246 (357)
T ss_dssp -CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEET
T ss_pred CCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCc
Confidence 466778888999999999999999999999889988764444 456677788888888887766554
No 28
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.80 E-value=0.14 Score=34.61 Aligned_cols=66 Identities=12% Similarity=0.071 Sum_probs=54.0
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeee--cCCCCceeeeCCcceEeeeeccccce
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFT--RNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYq--A~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
+.....++++.||+|.+++..+++....+....++.+--- .++...++-++.|=.+++-+..-|+.
T Consensus 96 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 163 (368)
T 3mmy_A 96 DDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP 163 (368)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSC
T ss_pred cCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcE
Confidence 3556778889999999999999999999888889886643 23445688899999999999888876
No 29
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.77 E-value=0.033 Score=46.37 Aligned_cols=64 Identities=14% Similarity=0.113 Sum_probs=47.5
Q ss_pred eEEEeeCCeEEEEeCCCCeeeEEeecCC-----CeeeeeecCCCCceeeeC-----CcceEeeeeccccceeee
Q 033675 33 ALVATLNGTVHLVDTKRGESRWSFSMGK-----PIYSSFTRNDPDFYVDVG-----EDWKLYFHRKGIGKMKDI 96 (114)
Q Consensus 33 aLVatlDGTiYLVd~~s~r~~WSFStGs-----PIYSSYqA~~~~~fidcg-----dDW~LY~h~~~~GK~kl~ 96 (114)
++|++.||.||.+|..+|++.|++..+. .+.++=.+.+...|+-++ -|=.+|..+..-||.+-.
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~ 197 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWR 197 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEE
Confidence 8999999999999999999999998876 233322222444455443 367899999999998543
No 30
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.77 E-value=0.0094 Score=49.63 Aligned_cols=36 Identities=28% Similarity=0.572 Sum_probs=33.0
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeee
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYS 64 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYS 64 (114)
..+++++++.||.|+.+|..+||.+|+|..++.+.+
T Consensus 483 agg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~ 518 (599)
T 1w6s_A 483 AGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIG 518 (599)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCS
T ss_pred cCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEe
Confidence 578899999999999999999999999999887764
No 31
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=95.73 E-value=0.14 Score=34.80 Aligned_cols=67 Identities=18% Similarity=0.240 Sum_probs=53.6
Q ss_pred CCceEEEeeCCeEEEEeCCCCeeeEEee-cCCCeeeeeecC-CCCceeeeCCcceEeeeeccccceeee
Q 033675 30 GDLALVATLNGTVHLVDTKRGESRWSFS-MGKPIYSSFTRN-DPDFYVDVGEDWKLYFHRKGIGKMKDI 96 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r~~WSFS-tGsPIYSSYqA~-~~~~fidcgdDW~LY~h~~~~GK~kl~ 96 (114)
....++|+.||+|.+++..++++...|. ...+|.+---.| +...++-+++|=.+++.+..-|+....
T Consensus 85 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 153 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAI 153 (366)
T ss_dssp CEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred CCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEE
Confidence 3467888999999999999999999998 566777654344 556788889999999999888877443
No 32
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.67 E-value=0.063 Score=38.82 Aligned_cols=63 Identities=14% Similarity=0.143 Sum_probs=45.0
Q ss_pred CCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 30 GDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
.++.++..-||+|+.+|.+ |+..|+|..+...|++-..++...++-+.++=+++.-+..-||.
T Consensus 136 G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 136 GNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp SCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred CCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence 3444444568999999998 99999999987777765554444455444343688888887887
No 33
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.54 E-value=0.013 Score=48.39 Aligned_cols=36 Identities=19% Similarity=0.453 Sum_probs=32.5
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeee
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYS 64 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYS 64 (114)
..+++++++.||+++.+|..+|+++|+|..++.+.+
T Consensus 487 ~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~ 522 (677)
T 1kb0_A 487 AGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVA 522 (677)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCS
T ss_pred CCCEEEEECCCCcEEEEECCCCceeeeeeCCCCccc
Confidence 567899999999999999999999999999987764
No 34
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=95.54 E-value=0.12 Score=36.58 Aligned_cols=68 Identities=10% Similarity=0.109 Sum_probs=54.1
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEee-cCCCeeeeeecCCCCceeeeCCcceEeeeeccccceee
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFS-MGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMKD 95 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFS-tGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~kl 95 (114)
+.....+.|+.||+|.++|..+++....|. ...+|.+---.|+...++-++.|-.+.+.+..-|+...
T Consensus 149 ~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 217 (420)
T 3vl1_A 149 PSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIH 217 (420)
T ss_dssp TTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeE
Confidence 356678889999999999999999998886 35667665444456678899999999999988887743
No 35
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=95.52 E-value=0.24 Score=35.82 Aligned_cols=65 Identities=9% Similarity=-0.110 Sum_probs=48.7
Q ss_pred CCceEEEeeCCeEEEEeCCCCeeeEEeec--CCCeeeeeecCCCCceeeeCCcceEeeeecccccee
Q 033675 30 GDLALVATLNGTVHLVDTKRGESRWSFSM--GKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMK 94 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r~~WSFSt--GsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~k 94 (114)
+...+.++.||+|++++..+++....+.. +++|.+---.++...++-++.|=.++..+..-|+..
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~ 169 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKL 169 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred CCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEE
Confidence 45678899999999999999999888876 667776533344455666667777877777767653
No 36
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.45 E-value=0.033 Score=45.79 Aligned_cols=67 Identities=25% Similarity=0.311 Sum_probs=48.3
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCe--eeeeecC---CCCceeeeCC-----cceEeeeeccccceee
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMGKPI--YSSFTRN---DPDFYVDVGE-----DWKLYFHRKGIGKMKD 95 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPI--YSSYqA~---~~~~fidcgd-----DW~LY~h~~~~GK~kl 95 (114)
..+.++|++.||+||.+|..+|++.|++..+.+- |..-.+| +...|+-++. |=.+|.-|..-||.+-
T Consensus 116 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 192 (668)
T 1kv9_A 116 WGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAW 192 (668)
T ss_dssp EBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEE
Confidence 5678899999999999999999999999986431 2111222 3344555432 4579999999999843
No 37
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.44 E-value=0.014 Score=47.94 Aligned_cols=36 Identities=28% Similarity=0.590 Sum_probs=33.1
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeee
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYS 64 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYS 64 (114)
..+++++++.||.|+.+|..+|+++|+|..++.+.+
T Consensus 468 ~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~ 503 (668)
T 1kv9_A 468 AGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVA 503 (668)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCS
T ss_pred CCCEEEEECCcccchhhhhhcChhheEecCCCCccc
Confidence 678899999999999999999999999999987764
No 38
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.36 E-value=0.27 Score=34.30 Aligned_cols=71 Identities=23% Similarity=0.203 Sum_probs=55.8
Q ss_pred CCCCCceEEEeeC---CeEEEEeCCCCeeeEEeec--------------CCCeeeeeecCCCCceeeeCCcceEeeeecc
Q 033675 27 PESGDLALVATLN---GTVHLVDTKRGESRWSFSM--------------GKPIYSSFTRNDPDFYVDVGEDWKLYFHRKG 89 (114)
Q Consensus 27 ~~~~~taLVatlD---GTiYLVd~~s~r~~WSFSt--------------GsPIYSSYqA~~~~~fidcgdDW~LY~h~~~ 89 (114)
++.....++++.| |+|+++|..++++...+.. ..+|.+-.-.++...++-++.|=.+++.+..
T Consensus 242 ~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 321 (397)
T 1sq9_A 242 SPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVK 321 (397)
T ss_dssp CSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETT
T ss_pred CCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 3456778889999 9999999999999999974 6677765444556678888889999999988
Q ss_pred ccceeeec
Q 033675 90 IGKMKDIM 97 (114)
Q Consensus 90 ~GK~kl~~ 97 (114)
-|+.....
T Consensus 322 ~~~~~~~~ 329 (397)
T 1sq9_A 322 TKERITTL 329 (397)
T ss_dssp TTEEEEEE
T ss_pred CCceeEEE
Confidence 88774333
No 39
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=95.32 E-value=0.36 Score=33.84 Aligned_cols=65 Identities=15% Similarity=0.124 Sum_probs=47.8
Q ss_pred CCCceEE-EeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecCCCC-ceeeeCCcceEeeeeccccce
Q 033675 29 SGDLALV-ATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPD-FYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 29 ~~~taLV-atlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~~-~fidcgdDW~LY~h~~~~GK~ 93 (114)
.....+| ++.||+|+++|..++++.+.+..+.++.+---.|+.. .|+-+.+|=.++.-+..-|+.
T Consensus 42 dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~ 108 (391)
T 1l0q_A 42 DGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTV 108 (391)
T ss_dssp TSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeE
Confidence 3333434 4489999999999999999999998776543233333 356666778899998888876
No 40
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=95.19 E-value=0.13 Score=34.93 Aligned_cols=65 Identities=15% Similarity=0.109 Sum_probs=51.5
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEe----ecCCCeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSF----SMGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSF----StGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
.+...++++.||+|+++|..+++....+ ....+|.+---.++...++-++.|=.+++.+..-|+.
T Consensus 127 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 195 (366)
T 3k26_A 127 DPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRM 195 (366)
T ss_dssp CTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHH
T ss_pred CCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCcc
Confidence 5567788889999999999999999998 4566777654444556788888998999888877665
No 41
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.17 E-value=0.044 Score=44.78 Aligned_cols=66 Identities=15% Similarity=0.203 Sum_probs=48.1
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCe--eeeeecC---CC------CceeeeC-----CcceEeeeeccccc
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMGKPI--YSSFTRN---DP------DFYVDVG-----EDWKLYFHRKGIGK 92 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPI--YSSYqA~---~~------~~fidcg-----dDW~LY~h~~~~GK 92 (114)
..+.++|++.||.||.+|..+|++.|++..+.+. |....+| +. ..|+-+. .+=.+|..|..-||
T Consensus 116 ~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~ 195 (582)
T 1flg_A 116 YGDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGE 195 (582)
T ss_dssp ETTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCC
T ss_pred ECCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCC
Confidence 5778899999999999999999999999887642 2222222 22 2344432 36689999999999
Q ss_pred ee
Q 033675 93 MK 94 (114)
Q Consensus 93 ~k 94 (114)
.+
T Consensus 196 ~~ 197 (582)
T 1flg_A 196 EI 197 (582)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 42
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.12 E-value=0.17 Score=34.90 Aligned_cols=66 Identities=18% Similarity=0.163 Sum_probs=51.5
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEee-cCCCeeeeeecCCCCceeeeCCcceEeeeeccccceee
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFS-MGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMKD 95 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFS-tGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~kl 95 (114)
.....++++.||+|++++..++++...+. ...+|.+-.-.++. .++-++.|-.+++-+..-|+...
T Consensus 258 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~ 324 (425)
T 1r5m_A 258 TNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLA 324 (425)
T ss_dssp TTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEE
T ss_pred CCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeE
Confidence 45577888899999999999999999996 45566654333344 88889999999999988887643
No 43
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=95.08 E-value=0.24 Score=33.82 Aligned_cols=66 Identities=17% Similarity=0.154 Sum_probs=48.7
Q ss_pred CCCCceEEEeeC-CeEEEEeCCCCeeeEEeecCCCeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 28 ESGDLALVATLN-GTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 28 ~~~~taLVatlD-GTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
+..+..+|++.+ |+|+++|..++++.+.+..+.|..-.+....+..|+-+.+|=.++.-+..-|+.
T Consensus 240 ~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~ 306 (353)
T 3vgz_A 240 TARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKV 306 (353)
T ss_dssp TTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEECCCCeEEEEECCCCeE
Confidence 345556777655 999999999999999999998854333322333688887777888888877776
No 44
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=95.04 E-value=0.15 Score=36.67 Aligned_cols=65 Identities=9% Similarity=-0.077 Sum_probs=52.5
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeec---CCCeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSM---GKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFSt---GsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
.....++++.||+|+++|..++++.+.+.. .++|.+---.|+...++-++.|-.+.+-+.+.|+.
T Consensus 181 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 248 (437)
T 3gre_A 181 EKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVL 248 (437)
T ss_dssp SCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccE
Confidence 467888899999999999999999999985 46777654334556678888898888888887776
No 45
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.04 E-value=0.057 Score=36.76 Aligned_cols=52 Identities=8% Similarity=0.052 Sum_probs=39.8
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeec--CCCeeeeeecCCCCceeeeC-Ccc
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSM--GKPIYSSFTRNDPDFYVDVG-EDW 81 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFSt--GsPIYSSYqA~~~~~fidcg-dDW 81 (114)
+.....++++.||+|+++|..++++...+.. +++|.+-- ++...++-++ |.|
T Consensus 261 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 261 PRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp TTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred CCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCc
Confidence 3566778889999999999999999999987 67887764 6555555544 444
No 46
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=95.00 E-value=0.35 Score=35.23 Aligned_cols=62 Identities=10% Similarity=0.033 Sum_probs=39.1
Q ss_pred CCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 30 GDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
++..++++.||+|+++|..+++..+.+.. ..++.+- +. +...++-+++|=.+++.+..-|+.
T Consensus 209 ~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~-~~-~~~~l~~~~~dg~i~iwd~~~~~~ 271 (445)
T 2ovr_B 209 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV-QY-DGRRVVSGAYDFMVKVWDPETETC 271 (445)
T ss_dssp TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEE-EE-CSSCEEEEETTSCEEEEEGGGTEE
T ss_pred CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEE-EE-CCCEEEEEcCCCEEEEEECCCCcE
Confidence 45566777777777777777777777753 2333322 22 445566667777777777666655
No 47
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=94.98 E-value=0.22 Score=33.08 Aligned_cols=61 Identities=10% Similarity=0.042 Sum_probs=48.8
Q ss_pred ceEEEeeCCeEEEEeCCCCeeeEEeecCC-CeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 32 LALVATLNGTVHLVDTKRGESRWSFSMGK-PIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 32 taLVatlDGTiYLVd~~s~r~~WSFStGs-PIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
..++++.||+|+++|..++++...+.... +|.+- ...+++-++-++.|=.+++-+..-|+.
T Consensus 238 ~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 238 DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSV-DCMSNGDIIVGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEE-EECTTSCEEEEETTSCEEEEESCGGGC
T ss_pred CEEEEecCCEEEEEECCCCceeEEEeccCceEEEE-EEccCCCEEEEeCCCcEEEEeCCCCce
Confidence 57788999999999999999999998765 66654 344443477799999999988887776
No 48
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=94.93 E-value=0.11 Score=36.70 Aligned_cols=64 Identities=8% Similarity=0.010 Sum_probs=47.8
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeee-EEeec--CCCeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESR-WSFSM--GKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~-WSFSt--GsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
......+|+.||+|.++|..+++.. -.|.. .+||.+---.|+...++-++|| .+.+-+.+.++.
T Consensus 181 dg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~-~v~iwd~~~~~~ 247 (343)
T 3lrv_A 181 DSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQ-TVVCFDLRKDVG 247 (343)
T ss_dssp TSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESS-BEEEEETTSSTT
T ss_pred CCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCC-eEEEEEcCCCCc
Confidence 4455556689999999999999987 77766 6778765333344556777788 999999888875
No 49
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=94.81 E-value=0.43 Score=33.38 Aligned_cols=67 Identities=12% Similarity=0.180 Sum_probs=51.9
Q ss_pred CCCCCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 27 PESGDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 27 ~~~~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
++.....+.|+.||+|.+++..+++..-++.. ..|+.+.--.++...++-+++|=.+.+-+..-|+.
T Consensus 22 sp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~ 89 (304)
T 2ynn_A 22 HPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEK 89 (304)
T ss_dssp CSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCE
T ss_pred CCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcE
Confidence 34566788899999999999999999998874 45666553344556788888998888888777765
No 50
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=94.75 E-value=0.43 Score=32.36 Aligned_cols=61 Identities=10% Similarity=0.018 Sum_probs=45.4
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecC-CC-CceeeeCCcceEeeeeccccce
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRN-DP-DFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~-~~-~~fidcgdDW~LY~h~~~~GK~ 93 (114)
.....+++ +|+|+++|..+++....+..+..+++- ..+ +. ..|+ .+.|-++++.+..-|+.
T Consensus 266 dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~-~~s~dg~~l~~-~~~~~~v~v~d~~~~~~ 328 (349)
T 1jmx_B 266 DPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCV-AFDKKGDKLYL-GGTFNDLAVFNPDTLEK 328 (349)
T ss_dssp CTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEE-EECSSSSCEEE-ESBSSEEEEEETTTTEE
T ss_pred CCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccce-EECCCCCEEEE-ecCCCeEEEEeccccce
Confidence 44455555 999999999999999999887766543 333 33 3466 67788999999888876
No 51
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=94.69 E-value=0.44 Score=34.49 Aligned_cols=67 Identities=13% Similarity=0.087 Sum_probs=50.6
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecC-CCeeeeeecCCCCceeeeCCcceEeeeeccccceeeec
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMG-KPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMKDIM 97 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStG-sPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~kl~~ 97 (114)
.....++++.||+|+++|..++++..+|... .++. +...+ +..++-+++|=.+.+-+..-++.....
T Consensus 321 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~-~~~~~-~~~l~s~s~dg~v~vwd~~~~~~~~~~ 388 (464)
T 3v7d_B 321 ERKRCISASMDTTIRIWDLENGELMYTLQGHTALVG-LLRLS-DKFLVSAAADGSIRGWDANDYSRKFSY 388 (464)
T ss_dssp TTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEEC-SSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEE-EEEEc-CCEEEEEeCCCcEEEEECCCCceeeee
Confidence 5567888999999999999999999999643 3443 33333 467888889988888888877764443
No 52
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=94.60 E-value=0.31 Score=35.45 Aligned_cols=65 Identities=14% Similarity=0.074 Sum_probs=48.1
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecC-CCeeeeeecCCCCceeeeCCcceEeeeeccccceee
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMG-KPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMKD 95 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStG-sPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~kl 95 (114)
.+...++|+.||+|+++|..++++..++... .++++- +. +...++-++.|=.++..+..-|+...
T Consensus 248 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~-~~-~~~~l~~~~~d~~i~i~d~~~~~~~~ 313 (445)
T 2ovr_B 248 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL-QF-DGIHVVSGSLDTSIRVWDVETGNCIH 313 (445)
T ss_dssp CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEE-EE-CSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEE-EE-CCCEEEEEeCCCeEEEEECCCCCEEE
Confidence 4567788899999999999999999998743 445432 33 55567777788888888887777643
No 53
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=94.58 E-value=0.76 Score=32.18 Aligned_cols=64 Identities=17% Similarity=0.198 Sum_probs=47.8
Q ss_pred CCCceEEEe-eCCeEEEEeCCCCeeeEEeecCCCeeeeeecC-CCC-ceeeeCCcceEeeeeccccce
Q 033675 29 SGDLALVAT-LNGTVHLVDTKRGESRWSFSMGKPIYSSFTRN-DPD-FYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 29 ~~~taLVat-lDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~-~~~-~fidcgdDW~LY~h~~~~GK~ 93 (114)
.....++++ .||+|+++|..++++...+..+..+++- ... +.. .|+-+++|=.+++.+..-|+.
T Consensus 84 dg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~-~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 150 (391)
T 1l0q_A 84 DGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGL-ALSPDGKKLYVTNNGDKTVSVINTVTKAV 150 (391)
T ss_dssp TSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEE-EECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceE-EECCCCCEEEEEeCCCCEEEEEECCCCcE
Confidence 334344444 6799999999999999999988877544 343 333 457888888999999888776
No 54
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=94.57 E-value=0.17 Score=34.21 Aligned_cols=56 Identities=11% Similarity=0.163 Sum_probs=39.5
Q ss_pred CCCCCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecCCCCceeee-CCcce
Q 033675 27 PESGDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRNDPDFYVDV-GEDWK 82 (114)
Q Consensus 27 ~~~~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~~~~~fidc-gdDW~ 82 (114)
++.....++++.||+|+++|..+++....|.. ..+|.+--=.|+...++-+ +|||.
T Consensus 282 sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~ 339 (368)
T 3mmy_A 282 HPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWS 339 (368)
T ss_dssp CTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCST
T ss_pred ecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccccc
Confidence 34566788899999999999999999999986 5666654333344444444 44553
No 55
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=94.57 E-value=0.7 Score=31.66 Aligned_cols=68 Identities=24% Similarity=0.360 Sum_probs=51.1
Q ss_pred CCCCCceEEEeeCCeEEEEeCCCCeeeEEeecCCC----eeeeeecCCCCceeeeCCcceEeeeecccccee
Q 033675 27 PESGDLALVATLNGTVHLVDTKRGESRWSFSMGKP----IYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMK 94 (114)
Q Consensus 27 ~~~~~taLVatlDGTiYLVd~~s~r~~WSFStGsP----IYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~k 94 (114)
++.....++++.||+|.++|..+++....|..... +...+..++..+++-+++|=.+++.+..-++..
T Consensus 201 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~ 272 (312)
T 4ery_A 201 SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIV 272 (312)
T ss_dssp CTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhh
Confidence 34566788899999999999999999998864332 333334445566788889989999888877763
No 56
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=94.53 E-value=0.62 Score=30.91 Aligned_cols=62 Identities=21% Similarity=0.297 Sum_probs=50.2
Q ss_pred eEEEeeCCeEEEEeCCCCeeeEEee-cCCCeeeeeecCCCCceeeeCCcceEeeeeccccceee
Q 033675 33 ALVATLNGTVHLVDTKRGESRWSFS-MGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMKD 95 (114)
Q Consensus 33 aLVatlDGTiYLVd~~s~r~~WSFS-tGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~kl 95 (114)
.++++.||+|+++|..++++...+. ..++|.+- +..+++.++-++.|=.+++.+..-|+...
T Consensus 198 ~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~-~~~~~~~l~~~~~dg~v~iwd~~~~~~~~ 260 (313)
T 3odt_A 198 FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCI-KLLPNGDIVSCGEDRTVRIWSKENGSLKQ 260 (313)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE-EECTTSCEEEEETTSEEEEECTTTCCEEE
T ss_pred EEEccCCCeEEEEECCchhhhhhhhcCCceEEEE-EEecCCCEEEEecCCEEEEEECCCCceeE
Confidence 7788999999999999999999997 45566654 44444468899999999999988888743
No 57
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=94.53 E-value=0.27 Score=34.73 Aligned_cols=67 Identities=9% Similarity=0.004 Sum_probs=52.4
Q ss_pred CCCCCceEEEeeCCeEEEEeCCCCeeeEEeecC--CCeeeeeecCCCC-ceeeeCCcceEeeeeccccce
Q 033675 27 PESGDLALVATLNGTVHLVDTKRGESRWSFSMG--KPIYSSFTRNDPD-FYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 27 ~~~~~taLVatlDGTiYLVd~~s~r~~WSFStG--sPIYSSYqA~~~~-~fidcgdDW~LY~h~~~~GK~ 93 (114)
++.....++++.||+|+++|..+++....+..+ .++.+---.|+.. .++-+++|-.+++.+..-|+.
T Consensus 256 s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 256 GTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC 325 (420)
T ss_dssp SCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS
T ss_pred cCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC
Confidence 346667888999999999999999999999764 5666553333444 688888999999999888754
No 58
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=94.40 E-value=0.3 Score=33.63 Aligned_cols=67 Identities=13% Similarity=0.130 Sum_probs=53.0
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEee--------------cCCCeeeeeecC-CCCceeeeCCcceEeeeeccccce
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFS--------------MGKPIYSSFTRN-DPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFS--------------tGsPIYSSYqA~-~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
.....+.++.||+|.+++..+++....+. ...+|.+---.| +...++-++.|=.+...+..-|+.
T Consensus 55 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 134 (408)
T 4a11_B 55 EGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQT 134 (408)
T ss_dssp TCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCcc
Confidence 56777888899999999999998888876 666777654444 446788999999999999888876
Q ss_pred ee
Q 033675 94 KD 95 (114)
Q Consensus 94 kl 95 (114)
..
T Consensus 135 ~~ 136 (408)
T 4a11_B 135 AD 136 (408)
T ss_dssp EE
T ss_pred ce
Confidence 43
No 59
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=94.29 E-value=0.47 Score=34.56 Aligned_cols=67 Identities=13% Similarity=0.078 Sum_probs=51.3
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecCCCCceeeeCCcceEeeeecccccee
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMK 94 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~k 94 (114)
+.....+.|+.||+|.++|..+++..-.+.. ..+|++---.|+...++-++.|..+.+-+..-|+..
T Consensus 133 ~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~ 200 (393)
T 1erj_A 133 PDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS 200 (393)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeE
Confidence 3456677788999999999999998887763 456665533345567889999999998888877753
No 60
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=94.26 E-value=0.55 Score=34.32 Aligned_cols=66 Identities=12% Similarity=0.081 Sum_probs=50.5
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecC-CCeeeeeecCCCCceeeeCCcceEeeeeccccceeee
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMG-KPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMKDI 96 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStG-sPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~kl~ 96 (114)
.++..++|+.||+|.++|..++++..++... .++.+ .+. +...++-++.|=.+++.+...|+....
T Consensus 265 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~-~~~-~~~~l~~g~~dg~i~iwd~~~~~~~~~ 331 (435)
T 1p22_A 265 DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC-LQY-RDRLVVSGSSDNTIRLWDIECGACLRV 331 (435)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE-EEE-ETTEEEEEETTSCEEEEETTTCCEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEE-EEe-CCCEEEEEeCCCeEEEEECCCCCEEEE
Confidence 4567788999999999999999999999743 44443 233 445778888898999999888876433
No 61
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=94.24 E-value=0.51 Score=32.54 Aligned_cols=66 Identities=17% Similarity=0.173 Sum_probs=51.9
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecCCCCceeeeCCcceEeeeecccccee
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMK 94 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~k 94 (114)
+.....++++.||+|++++ .+++....+.. ..+|.+-.-.++...++-++.|=.++..+..-|+..
T Consensus 118 ~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 184 (425)
T 1r5m_A 118 HDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVM 184 (425)
T ss_dssp TTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEE
T ss_pred CCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEE
Confidence 3566778889999999999 78889999874 566766644456667888999999999888888763
No 62
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=94.24 E-value=0.36 Score=33.00 Aligned_cols=60 Identities=18% Similarity=0.299 Sum_probs=41.8
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeec-CCCCceeeeCCcceEeeeeccccce
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTR-NDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA-~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
+.+..+|++.||.||.++.. |+..|.+..+.+..++-.. ++...|+-. =.||.-+ .-|+.
T Consensus 146 ~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~ 206 (330)
T 3hxj_A 146 EDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTE 206 (330)
T ss_dssp TTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCE
T ss_pred CCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcE
Confidence 46778899999999999999 9999999877665444333 344445544 4566666 45554
No 63
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=94.15 E-value=0.73 Score=33.65 Aligned_cols=65 Identities=11% Similarity=0.112 Sum_probs=49.0
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecCCCCceeeeCCcceEeeeeccccceee
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMKD 95 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~kl 95 (114)
..+..++|+.||+|.+++..+++..+.+.. .++|.+- +. +...++-++.|=.+.+.+..-|+...
T Consensus 142 d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l-~~-~~~~l~sg~~dg~i~vwd~~~~~~~~ 207 (435)
T 1p22_A 142 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCL-QY-DERVIITGSSDSTVRVWDVNTGEMLN 207 (435)
T ss_dssp CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEE-EC-CSSEEEEEETTSCEEEEESSSCCEEE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEE-EE-CCCEEEEEcCCCeEEEEECCCCcEEE
Confidence 455677889999999999999999999973 3455432 33 55677888888888888877777633
No 64
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=94.10 E-value=0.9 Score=32.56 Aligned_cols=64 Identities=16% Similarity=0.160 Sum_probs=50.9
Q ss_pred CceEEEeeCCeEEEEeCCCCeeeEEee---cCCCeeeeeecCCCCceeeeCCcceEeeeecccccee
Q 033675 31 DLALVATLNGTVHLVDTKRGESRWSFS---MGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMK 94 (114)
Q Consensus 31 ~taLVatlDGTiYLVd~~s~r~~WSFS---tGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~k 94 (114)
...+.++.||+|.++|..+++....+. ...+|.+---.++...++-++.|-.+++.+..-|+..
T Consensus 145 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 211 (402)
T 2aq5_A 145 NVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVV 211 (402)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEE
T ss_pred CEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCcee
Confidence 567788999999999999999999993 3456665533345567888889999999998888773
No 65
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=94.04 E-value=0.29 Score=35.55 Aligned_cols=58 Identities=19% Similarity=0.159 Sum_probs=45.9
Q ss_pred ceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecC--CCCceeeeCCcceEeeeeccc
Q 033675 32 LALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRN--DPDFYVDVGEDWKLYFHRKGI 90 (114)
Q Consensus 32 taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~--~~~~fidcgdDW~LY~h~~~~ 90 (114)
....++.||+|+++|..++++...+.-..+|.+- +.+ +...++-|+.|=.+++++...
T Consensus 284 ~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~v-afsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 284 FLASISEDCTVAVLDADFSEVFRDLSHRDFVTGV-AWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp CEEEEETTSCEEEECTTSCEEEEECCCSSCEEEE-EECSSSTTEEEEEETTSCEEEEECC-
T ss_pred EEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEE-EEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 4456789999999999999999988777788764 433 445688999999999988644
No 66
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=93.99 E-value=0.75 Score=33.21 Aligned_cols=68 Identities=10% Similarity=0.084 Sum_probs=49.1
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecCCCCceeee-C--CcceEeeeeccccceee
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRNDPDFYVDV-G--EDWKLYFHRKGIGKMKD 95 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~~~~~fidc-g--dDW~LY~h~~~~GK~kl 95 (114)
+.....++++.||+|+++|..++++...+.. ..++.+---.|+...++-+ + .|=.+++.+..-|+...
T Consensus 227 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~ 298 (401)
T 4aez_A 227 SDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVN 298 (401)
T ss_dssp TTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEE
T ss_pred CCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEE
Confidence 3566788889999999999999999999964 4455544333334444444 3 58899999988887743
No 67
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=93.92 E-value=1 Score=31.00 Aligned_cols=65 Identities=12% Similarity=0.086 Sum_probs=52.1
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecCCC---CceeeeCCcceEeeeeccccce
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDP---DFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~---~~fidcgdDW~LY~h~~~~GK~ 93 (114)
.....+.++.||+|.+++..++++...+....++++..-.+.. ..++-++.|-.++..+..-|+.
T Consensus 111 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 178 (408)
T 4a11_B 111 DTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC 178 (408)
T ss_dssp CTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCC
T ss_pred CCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce
Confidence 4456778888999999999999999999999998876544422 3677788888888888777765
No 68
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=93.82 E-value=0.48 Score=33.49 Aligned_cols=52 Identities=13% Similarity=0.270 Sum_probs=39.8
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecCCCCceeeeCCc
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPDFYVDVGED 80 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~~~fidcgdD 80 (114)
+.....+.++.||+|.++|..++++...+....++++- +.++++.++-++.+
T Consensus 206 p~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~-~~sp~~~~la~~~~ 257 (319)
T 3frx_A 206 PDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSL-AFSPNRYWLAAATA 257 (319)
T ss_dssp TTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEE-EECSSSSEEEEEET
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEE-EEcCCCCEEEEEcC
Confidence 35566777889999999999999999999998888765 55555555555444
No 69
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=93.75 E-value=0.72 Score=30.97 Aligned_cols=60 Identities=15% Similarity=0.056 Sum_probs=42.2
Q ss_pred CCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecC-CCC-ceeeeCCcceEeeeeccccce
Q 033675 30 GDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRN-DPD-FYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~-~~~-~fidcgdDW~LY~h~~~~GK~ 93 (114)
....+++ ||+|+++|..+++..+.+..+..+++- ... +.. .|+ ++.|=++++-+..-|+.
T Consensus 252 g~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~-~~s~dg~~l~~-~~~~~~i~v~d~~~~~~ 313 (337)
T 1pby_B 252 KTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSV-NVSTDGSTVWL-GGALGDLAAYDAETLEK 313 (337)
T ss_dssp SSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEE-EECTTSCEEEE-ESBSSEEEEEETTTCCE
T ss_pred CCEEEEe--CCeEEEEECCCCcCcceecCCCceeeE-EECCCCCEEEE-EcCCCcEEEEECcCCcE
Confidence 3344444 899999999999999999988766543 333 333 355 45566788888777775
No 70
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=93.74 E-value=1.1 Score=30.71 Aligned_cols=66 Identities=15% Similarity=0.221 Sum_probs=50.1
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeecC-CCeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSMG-KPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFStG-sPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
+.....+.++.||+|.++|..+++....|... .||.+-.-.++...++-++.|=.+.+.+...|+.
T Consensus 117 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~ 183 (312)
T 4ery_A 117 PQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 183 (312)
T ss_dssp SSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCce
Confidence 35567788899999999999999999998753 5666543333556678888887888888777765
No 71
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=93.71 E-value=0.58 Score=34.34 Aligned_cols=67 Identities=12% Similarity=0.129 Sum_probs=51.6
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecC-CCCceeeeCCcceEeeeecccccee
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRN-DPDFYVDVGEDWKLYFHRKGIGKMK 94 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~-~~~~fidcgdDW~LY~h~~~~GK~k 94 (114)
+.....+.|+.||+|.++|..++++.-.|.. ..+|++---.+ +...++-|++|=.+.+-+.+-|+..
T Consensus 137 pdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~ 205 (344)
T 4gqb_B 137 SSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPA 205 (344)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeecccccccccccccccee
Confidence 3556677889999999999999999999974 45666542223 3356889999999999888888763
No 72
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=93.71 E-value=0.56 Score=34.55 Aligned_cols=64 Identities=17% Similarity=0.189 Sum_probs=52.3
Q ss_pred CCceEEEeeCCeEEEEeCCCCeeeEEe-----ecCCCeeeeeecCCCCceeeeCCcceEeeeecccccee
Q 033675 30 GDLALVATLNGTVHLVDTKRGESRWSF-----SMGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMK 94 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r~~WSF-----StGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~k 94 (114)
....++++.||+|++++..++++...+ ....+|.+-.-. +...++-++.|=.+.+-+..-|+..
T Consensus 219 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~ 287 (615)
T 1pgu_A 219 GEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCV 287 (615)
T ss_dssp CCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEE
Confidence 567788899999999999999999999 567788765333 6677888888988888888877763
No 73
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=93.67 E-value=1.3 Score=31.68 Aligned_cols=67 Identities=15% Similarity=0.221 Sum_probs=51.0
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecCCCCceeeeCCcceEeeeecccccee
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMK 94 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~k 94 (114)
+.....++++.||+|.++|..++++.-.+.. ..||.+---.|+...++-+++|=.+.+-+..-++..
T Consensus 174 pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~ 241 (321)
T 3ow8_A 174 PDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLA 241 (321)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCccee
Confidence 4566778889999999999999999998864 456766533345567788888988888887776653
No 74
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=93.61 E-value=0.7 Score=33.51 Aligned_cols=66 Identities=14% Similarity=0.167 Sum_probs=50.5
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecC-CC-CceeeeCCcceEeeeecccccee
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRN-DP-DFYVDVGEDWKLYFHRKGIGKMK 94 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~-~~-~~fidcgdDW~LY~h~~~~GK~k 94 (114)
+.....+.|+.||+|.++|..++++...|.. ..++++- +.+ +. ..++-+++|=.+.+-+..-|+..
T Consensus 149 pdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v-~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~ 217 (357)
T 4g56_B 149 SDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCV-AACPGKDTIFLSCGEDGRILLWDTRKPKPA 217 (357)
T ss_dssp SSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE-EECTTCSSCEEEEETTSCEEECCTTSSSCB
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEE-EEccCCCceeeeeccCCceEEEECCCCcee
Confidence 3556677789999999999999999999975 3455543 333 33 46889999988888888877763
No 75
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=93.60 E-value=0.53 Score=33.16 Aligned_cols=62 Identities=13% Similarity=0.119 Sum_probs=50.9
Q ss_pred ceEEEeeCCeEEEEeCCC----CeeeEEeecCCCeeeeeecC-CCCceeeeCCcceEeeeeccccce
Q 033675 32 LALVATLNGTVHLVDTKR----GESRWSFSMGKPIYSSFTRN-DPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 32 taLVatlDGTiYLVd~~s----~r~~WSFStGsPIYSSYqA~-~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
..+.++.||+|.++|..+ +++.-.+....++.+---.| +...++-++.|=.+++.+..-|+.
T Consensus 219 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 219 LMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp EEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTS
T ss_pred EEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 788889999999999988 78888888888888764444 556788888899999998887765
No 76
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=93.50 E-value=0.61 Score=31.74 Aligned_cols=65 Identities=9% Similarity=0.105 Sum_probs=49.1
Q ss_pred CCCCceEEEeeCCeEEEEeCC--CCeeeEEeec-CCCeeeeeecCC--CCceeeeCCcceEeeeeccccc
Q 033675 28 ESGDLALVATLNGTVHLVDTK--RGESRWSFSM-GKPIYSSFTRND--PDFYVDVGEDWKLYFHRKGIGK 92 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~--s~r~~WSFSt-GsPIYSSYqA~~--~~~fidcgdDW~LY~h~~~~GK 92 (114)
+.....++|+.||+|++++.. +++....+.. ..+|.+---.++ ...++-++.|-.+.+-+..-|+
T Consensus 21 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 90 (379)
T 3jrp_A 21 YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR 90 (379)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTE
T ss_pred CCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCc
Confidence 345677788899999999877 7788877763 467765533344 5778899999999988888886
No 77
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=93.39 E-value=0.48 Score=34.60 Aligned_cols=62 Identities=18% Similarity=0.180 Sum_probs=47.5
Q ss_pred CCCCCceEEEeeCCeEEEEeCCCCeeeEEeecC--CCeeeeeecCCCCceeeeCCcceEeeeec
Q 033675 27 PESGDLALVATLNGTVHLVDTKRGESRWSFSMG--KPIYSSFTRNDPDFYVDVGEDWKLYFHRK 88 (114)
Q Consensus 27 ~~~~~taLVatlDGTiYLVd~~s~r~~WSFStG--sPIYSSYqA~~~~~fidcgdDW~LY~h~~ 88 (114)
++...+..+|+.||+|.++|..+++++-.|-.| .+|++--=-|+...++-+.+|=.+-.++.
T Consensus 278 Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 278 DMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp CTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred CCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 345566777899999999999999999998654 67776422335567889999988877774
No 78
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=93.37 E-value=0.85 Score=33.25 Aligned_cols=66 Identities=12% Similarity=0.129 Sum_probs=48.8
Q ss_pred CCCCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 27 PESGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 27 ~~~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
++.....++|+.||+|.++|..+++....+......-.+... +...+.-++.|..++.++......
T Consensus 156 spdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~-~~~~l~sgs~d~~i~~~d~~~~~~ 221 (420)
T 4gga_A 156 IKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW-NSYILSSGSRSGHIHHHDVRVAEH 221 (420)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE-ETTEEEEEETTSEEEEEETTSSSC
T ss_pred CCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee-CCCEEEEEeCCCceeEeeecccce
Confidence 345677888999999999999999999998754443333332 445677788888888887765544
No 79
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=93.35 E-value=0.4 Score=32.83 Aligned_cols=64 Identities=19% Similarity=0.187 Sum_probs=48.0
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeecCC-CeeeeeecCCCCceeeeCCcceEeeeeccc--cc
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSMGK-PIYSSFTRNDPDFYVDVGEDWKLYFHRKGI--GK 92 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFStGs-PIYSSYqA~~~~~fidcgdDW~LY~h~~~~--GK 92 (114)
+.....++++.||+|+++|..++++...|.... ++.+- +..+++-++-+|.|=.+++.+..- |+
T Consensus 212 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~~~d~~i~i~~~~~~~~~ 278 (372)
T 1k8k_C 212 ANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAV-TFITESSLVAAGHDCFPVLFTYDSAAGK 278 (372)
T ss_dssp SSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEE-EEEETTEEEEEETTSSCEEEEEETTTTE
T ss_pred CCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEE-EEecCCCEEEEEeCCeEEEEEccCcCce
Confidence 355678888999999999999999999998664 66544 444444567777887777777666 54
No 80
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=93.32 E-value=1.1 Score=31.71 Aligned_cols=66 Identities=12% Similarity=0.114 Sum_probs=49.8
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
+.....+.|+.||+|.++|..+++..-.|.. ..+|.+-.-.|+...++-+++|=.+.+.+..-++.
T Consensus 194 ~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~ 260 (340)
T 1got_B 194 PDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE 260 (340)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred CCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 3455677888999999999999999988864 45666553334556788888898888888776665
No 81
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=93.28 E-value=0.67 Score=30.53 Aligned_cols=64 Identities=16% Similarity=0.048 Sum_probs=48.7
Q ss_pred CCceEEEeeCCeEEEEeCCCC---------eeeEEeec-CCCeeeeeecCC--CCceeeeCCcceEeeeeccccce
Q 033675 30 GDLALVATLNGTVHLVDTKRG---------ESRWSFSM-GKPIYSSFTRND--PDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~---------r~~WSFSt-GsPIYSSYqA~~--~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
....++|+.||+|.+++..++ ++...+.. .++|.+---.++ ...++-++.|-.+++.+..-++.
T Consensus 71 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~ 146 (351)
T 3f3f_A 71 GRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSD 146 (351)
T ss_dssp CSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTC
T ss_pred CCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHH
Confidence 567788899999999999887 55666653 456665544444 56788899999999999877664
No 82
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=93.27 E-value=1.3 Score=30.22 Aligned_cols=65 Identities=11% Similarity=0.013 Sum_probs=43.3
Q ss_pred CCCCceEEEee-CCeEEEEeCCCCee-eEEeecCCCeeeeeecCCC-CceeeeCCcc----eEeeeeccccce
Q 033675 28 ESGDLALVATL-NGTVHLVDTKRGES-RWSFSMGKPIYSSFTRNDP-DFYVDVGEDW----KLYFHRKGIGKM 93 (114)
Q Consensus 28 ~~~~taLVatl-DGTiYLVd~~s~r~-~WSFStGsPIYSSYqA~~~-~~fidcgdDW----~LY~h~~~~GK~ 93 (114)
+.....++++. |++|+.+|..++++ ...+..+..........+. ...+ +..+= ++++.+..-|+.
T Consensus 49 ~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~ 120 (331)
T 3u4y_A 49 SDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNKF 120 (331)
T ss_dssp SSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTEE
T ss_pred CCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEE-EecCCCCcccEEEEECCCCCe
Confidence 34455667766 88999999999998 7777776654442344433 3322 44444 788888887776
No 83
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=93.03 E-value=1.3 Score=30.94 Aligned_cols=63 Identities=6% Similarity=-0.095 Sum_probs=48.6
Q ss_pred CCceEEEeeCCeEEEEeCCCCeeeEEeec-------CCCeeeeeecCCC-CceeeeCCcc---eEeeeeccccc
Q 033675 30 GDLALVATLNGTVHLVDTKRGESRWSFSM-------GKPIYSSFTRNDP-DFYVDVGEDW---KLYFHRKGIGK 92 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r~~WSFSt-------GsPIYSSYqA~~~-~~fidcgdDW---~LY~h~~~~GK 92 (114)
+...++++.||+|.++|..++++...+.. +.++.+---.|++ ..++-+++|- .+++.+...++
T Consensus 178 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~ 251 (416)
T 2pm9_A 178 AHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN 251 (416)
T ss_dssp TTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT
T ss_pred CcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC
Confidence 45677778999999999999999999987 5667665333443 4677888887 88888887764
No 84
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=92.93 E-value=0.67 Score=31.53 Aligned_cols=64 Identities=5% Similarity=0.033 Sum_probs=47.0
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEee-----cCCCeeeeeecCC---CCceeeeCCcceEeeeeccccc
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFS-----MGKPIYSSFTRND---PDFYVDVGEDWKLYFHRKGIGK 92 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFS-----tGsPIYSSYqA~~---~~~fidcgdDW~LY~h~~~~GK 92 (114)
.....++++.||+|+++|..+++..|... ..++|.+---.|+ ...++-++.|-.+++-+...|+
T Consensus 171 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 171 ESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp TTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred CCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence 56788889999999999988877555443 2566765533334 4668888999988888877764
No 85
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=92.92 E-value=1.6 Score=30.74 Aligned_cols=62 Identities=10% Similarity=0.029 Sum_probs=47.1
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecCCCC-ceeeeCCcceEeeeecccc
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRNDPD-FYVDVGEDWKLYFHRKGIG 91 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~~~~-~fidcgdDW~LY~h~~~~G 91 (114)
.....++++.||+|+++|. ++++...+.. ..+|.+---.|+.. .++-|+.|-.+++-+...+
T Consensus 174 ~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 237 (383)
T 3ei3_B 174 SRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNI 237 (383)
T ss_dssp TTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGC
T ss_pred CCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCC
Confidence 5667888999999999998 6888888874 45565543333444 6889999999988888773
No 86
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=92.91 E-value=1.5 Score=29.96 Aligned_cols=67 Identities=9% Similarity=-0.067 Sum_probs=49.2
Q ss_pred CCCCceEEEeeCCeEEEEe------------------CCCCeeeEEeec-CCCeeeeeecCCCCceeeeCCcceEeeeec
Q 033675 28 ESGDLALVATLNGTVHLVD------------------TKRGESRWSFSM-GKPIYSSFTRNDPDFYVDVGEDWKLYFHRK 88 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd------------------~~s~r~~WSFSt-GsPIYSSYqA~~~~~fidcgdDW~LY~h~~ 88 (114)
+.....++++.||+|+++| ..++++.-.|.. ..++.+-.-.++...++-+++|=.+++-+.
T Consensus 152 ~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~ 231 (372)
T 1k8k_C 152 PNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADA 231 (372)
T ss_dssp TTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEG
T ss_pred CCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 3556777888999999999 557888888853 445655433334557788888888998888
Q ss_pred ccccee
Q 033675 89 GIGKMK 94 (114)
Q Consensus 89 ~~GK~k 94 (114)
.-|+..
T Consensus 232 ~~~~~~ 237 (372)
T 1k8k_C 232 DKKMAV 237 (372)
T ss_dssp GGTTEE
T ss_pred CCCcee
Confidence 888763
No 87
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=92.90 E-value=0.68 Score=33.99 Aligned_cols=64 Identities=22% Similarity=0.284 Sum_probs=45.9
Q ss_pred CCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecCCC-CceeeeCCcceEeeeeccccce
Q 033675 30 GDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRNDP-DFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~~~-~~fidcgdDW~LY~h~~~~GK~ 93 (114)
..+...|+.||+|.++|..++++..+|.. ..+|++---.|+. .+++-+++|-.+++-+...|+.
T Consensus 227 ~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~ 292 (344)
T 4gqb_B 227 SEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL 292 (344)
T ss_dssp TTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE
T ss_pred CcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE
Confidence 34455678999999999999999999874 4566654222333 3567889999999888887775
No 88
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=92.82 E-value=1.4 Score=31.27 Aligned_cols=66 Identities=12% Similarity=0.032 Sum_probs=47.7
Q ss_pred CCCCceEEEee--------CCeEEEEeCCCCeeeEEeecCCCeeeeeecCCC-CceeeeCCcceEeeeeccccce
Q 033675 28 ESGDLALVATL--------NGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDP-DFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 28 ~~~~taLVatl--------DGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~-~~fidcgdDW~LY~h~~~~GK~ 93 (114)
+.....++++. ||+|+++|..++++.+.+..+..+.+..-.++. ..|+-++.|=+++.-+..-|+.
T Consensus 263 ~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~ 337 (433)
T 3bws_A 263 KDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKV 337 (433)
T ss_dssp TTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcE
Confidence 34556677774 899999999999999988655555443222333 3577778888999888887776
No 89
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=92.82 E-value=0.76 Score=32.41 Aligned_cols=65 Identities=11% Similarity=-0.053 Sum_probs=46.1
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEee--cCCCeeeeeecCCC-CceeeeCCcceEeeeecccccee
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFS--MGKPIYSSFTRNDP-DFYVDVGEDWKLYFHRKGIGKMK 94 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFS--tGsPIYSSYqA~~~-~~fidcgdDW~LY~h~~~~GK~k 94 (114)
.....+.++.||+|.++|..+++....+. .+.++.+- +..+. ..+.-+++|=.+.+-+..-|+..
T Consensus 138 ~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~-~~~pdg~~lasg~~dg~i~iwd~~~~~~~ 205 (343)
T 3lrv_A 138 NTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSG-VLHKDSLLLALYSPDGILDVYNLSSPDQA 205 (343)
T ss_dssp -CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEE-EECTTSCEEEEECTTSCEEEEESSCTTSC
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEE-EECCCCCEEEEEcCCCEEEEEECCCCCCC
Confidence 45667779999999999999999977663 33445433 44444 45566688888888888877753
No 90
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=92.80 E-value=0.88 Score=32.84 Aligned_cols=64 Identities=16% Similarity=0.184 Sum_probs=48.2
Q ss_pred CCCCceEEEeeCCe-EEEEeCCCCeeeEEee---cCCCeeeeeecCCCCceeeeCCcceEeeeecccc
Q 033675 28 ESGDLALVATLNGT-VHLVDTKRGESRWSFS---MGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIG 91 (114)
Q Consensus 28 ~~~~taLVatlDGT-iYLVd~~s~r~~WSFS---tGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~G 91 (114)
+.....+.|+.||| |.++|..+++..-.|. ...+|++---.|+...++-+++|=.+.+-+..-+
T Consensus 205 ~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 205 RKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp TTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 35566778899999 9999999999999998 4577876543445567888888866666665443
No 91
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=92.74 E-value=1.3 Score=31.65 Aligned_cols=69 Identities=13% Similarity=0.114 Sum_probs=50.0
Q ss_pred CCCceEEEeeCCeEEEEeCCCC-------eeeEEee-cCCCeeeeeecCCC-CceeeeCCcceEeeeeccccceeeec
Q 033675 29 SGDLALVATLNGTVHLVDTKRG-------ESRWSFS-MGKPIYSSFTRNDP-DFYVDVGEDWKLYFHRKGIGKMKDIM 97 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~-------r~~WSFS-tGsPIYSSYqA~~~-~~fidcgdDW~LY~h~~~~GK~kl~~ 97 (114)
.....++|+.||+|.+++..++ ++...+. ...+|.+---.|+. ..++-++.|-.++..+..-|+.....
T Consensus 93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 170 (402)
T 2aq5_A 93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTL 170 (402)
T ss_dssp CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEE
Confidence 5567788889999999999888 5666665 34555544223333 47889999999999998888774443
No 92
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=92.73 E-value=1.1 Score=32.68 Aligned_cols=66 Identities=17% Similarity=0.217 Sum_probs=50.3
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecC-CCCceeeeCCcceEeeeeccccce
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRN-DPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~-~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
+.....+.++.||+|.++|..+++....+.....+.+.--.| +...++-++.|=.+.+-+..-|+.
T Consensus 175 p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~ 241 (393)
T 1erj_A 175 PSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL 241 (393)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCE
T ss_pred CCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 355677888999999999999999999998887777654334 445677778887777777666654
No 93
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=92.66 E-value=1.3 Score=29.95 Aligned_cols=67 Identities=9% Similarity=0.108 Sum_probs=47.8
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCe-eeEEeec--C---CCeeeeee---c-CCCCceeeeCCcceEeeeecccccee
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGE-SRWSFSM--G---KPIYSSFT---R-NDPDFYVDVGEDWKLYFHRKGIGKMK 94 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r-~~WSFSt--G---sPIYSSYq---A-~~~~~fidcgdDW~LY~h~~~~GK~k 94 (114)
+.....+.++.||+|.++|..+++ +...+.. | .++++--- . ++...++-+++|=.+++.+..-++..
T Consensus 127 ~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 203 (357)
T 3i2n_A 127 EGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALR 203 (357)
T ss_dssp -CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEE
T ss_pred CCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCcee
Confidence 345678888999999999999887 7777754 2 25654421 2 34456777788889999888888763
No 94
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=92.65 E-value=2.2 Score=31.13 Aligned_cols=51 Identities=8% Similarity=0.166 Sum_probs=37.3
Q ss_pred CCCceEEEe--eCCeEEEEeCCCCeeeEEeecCCCeeeeeecCCC-CceeeeCCc
Q 033675 29 SGDLALVAT--LNGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDP-DFYVDVGED 80 (114)
Q Consensus 29 ~~~taLVat--lDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~-~~fidcgdD 80 (114)
......+|+ .||+|.++|..+++....+..+++|++- ..+|+ ..+.-+.+|
T Consensus 144 Dg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v-~fspdg~~l~s~s~~ 197 (365)
T 4h5i_A 144 EGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDL-HFSTDGKVVAYITGS 197 (365)
T ss_dssp TSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEE-EECTTSSEEEEECSS
T ss_pred CCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEE-EEccCCceEEeccce
Confidence 344445666 7999999999999999999999999865 44443 445555555
No 95
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=92.65 E-value=1.5 Score=31.00 Aligned_cols=62 Identities=16% Similarity=0.205 Sum_probs=46.5
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecCCCCceeeeCCcceEeeeecc
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRNDPDFYVDVGEDWKLYFHRKG 89 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~~~~~fidcgdDW~LY~h~~~ 89 (114)
+.....+.|+.||+|.++|..+++..-.|.. ..++++----|+...++-++.|=.+.+-+..
T Consensus 86 ~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~ 148 (343)
T 2xzm_R 86 QENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNIL 148 (343)
T ss_dssp SSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESS
T ss_pred CCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEecc
Confidence 3456677889999999999999999988863 4567654333455678888888777777765
No 96
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=92.63 E-value=0.64 Score=31.53 Aligned_cols=66 Identities=12% Similarity=0.079 Sum_probs=51.3
Q ss_pred CCCceEEEeeCCeEEEEeCCCCe----eeEEeecCCCeeeeeecCCCC-ceeeeCCcceEeeeec-ccccee
Q 033675 29 SGDLALVATLNGTVHLVDTKRGE----SRWSFSMGKPIYSSFTRNDPD-FYVDVGEDWKLYFHRK-GIGKMK 94 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r----~~WSFStGsPIYSSYqA~~~~-~fidcgdDW~LY~h~~-~~GK~k 94 (114)
.....++++.||+|.+++..+++ +...+....+|.+-.-.++.. .++-++.|=.++..+. .-|+.+
T Consensus 22 ~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~ 93 (342)
T 1yfq_A 22 SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQ 93 (342)
T ss_dssp GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEE
T ss_pred CCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceE
Confidence 45667888899999999998888 788888888888764444556 6777888888888887 666653
No 97
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=92.56 E-value=1.5 Score=29.19 Aligned_cols=40 Identities=18% Similarity=0.197 Sum_probs=31.8
Q ss_pred CCCCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeee
Q 033675 27 PESGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSF 66 (114)
Q Consensus 27 ~~~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSY 66 (114)
++.....+.|+.||+|.+++..+++....+........+.
T Consensus 76 ~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~ 115 (318)
T 4ggc_A 76 IKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSL 115 (318)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEE
T ss_pred CCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEe
Confidence 4466778889999999999999999999987655544443
No 98
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=92.53 E-value=1.1 Score=31.37 Aligned_cols=65 Identities=17% Similarity=0.121 Sum_probs=50.0
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecCCC-CceeeeCCcceEeeeeccccce
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRNDP-DFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~~~-~~fidcgdDW~LY~h~~~~GK~ 93 (114)
.....+.++.||+|+++|..++++.-.+.. ..++.+---.|+. ..++-+++|=.+.+.+..-++.
T Consensus 274 ~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 274 DEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp CSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCC
T ss_pred CCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCC
Confidence 567788889999999999999999999875 4556544333344 5788889998888888776665
No 99
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=92.49 E-value=0.71 Score=32.82 Aligned_cols=63 Identities=13% Similarity=0.010 Sum_probs=44.2
Q ss_pred CCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecCCC--CceeeeCCcceEeeeeccccce
Q 033675 30 GDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRNDP--DFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~~~--~~fidcgdDW~LY~h~~~~GK~ 93 (114)
....+.++.||+|++++..+++..+.+.. +.++.+ ...++. ..|+-+.+|=.++.-+..-|+.
T Consensus 181 ~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~ 246 (433)
T 3bws_A 181 NELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKI-LLYDPIRDLVYCSNWISEDISVIDRKTKLE 246 (433)
T ss_dssp TEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEE-EEEETTTTEEEEEETTTTEEEEEETTTTEE
T ss_pred CEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeE-EEEcCCCCEEEEEecCCCcEEEEECCCCcE
Confidence 34445566789999999999999999974 334433 233332 3466776777899888877766
No 100
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=92.35 E-value=2.2 Score=30.44 Aligned_cols=66 Identities=17% Similarity=0.150 Sum_probs=47.0
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecC-CCCceeeeCCcceEeeeecccccee
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRN-DPDFYVDVGEDWKLYFHRKGIGKMK 94 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~-~~~~fidcgdDW~LY~h~~~~GK~k 94 (114)
.....+.++.||+|.++|..+++...++..+..--.+.+.+ +...++-++.|=.+.+.+..-|+..
T Consensus 91 ~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~ 157 (321)
T 3ow8_A 91 TLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKE 157 (321)
T ss_dssp SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCcee
Confidence 44567788999999999999999999998765332233444 4455666677777777777766653
No 101
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=92.05 E-value=2.3 Score=30.58 Aligned_cols=64 Identities=11% Similarity=0.085 Sum_probs=48.2
Q ss_pred CCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 30 GDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
....+.|+.||+|.++|..+++..-.|.. ..+|.+---.|+...++-+++|=.+.+-+.+-++.
T Consensus 210 g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~ 274 (354)
T 2pbi_B 210 GNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADRE 274 (354)
T ss_dssp CCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 45777889999999999999999988864 45566543334556788889998887777766654
No 102
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=91.96 E-value=0.77 Score=32.92 Aligned_cols=66 Identities=17% Similarity=0.063 Sum_probs=50.1
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEee--cCCCeeeeeecC----CCCceeeeCCcceEeeeeccccce
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFS--MGKPIYSSFTRN----DPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFS--tGsPIYSSYqA~----~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
+.....++|+.||+|.++|..++++.-++. ...+|.+-.-.| +...++-+++|=.+++-+..-|+.
T Consensus 224 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 295 (437)
T 3gre_A 224 EECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHC 295 (437)
T ss_dssp TTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEE
T ss_pred CCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcE
Confidence 356778889999999999999999988774 455676543222 223677888898899988888876
No 103
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=91.88 E-value=2.3 Score=32.99 Aligned_cols=68 Identities=10% Similarity=0.152 Sum_probs=51.4
Q ss_pred CCCCCceEEEeeCCeEEEEeCCCCeeeEEee-cCCCeeeeeecCCCCceeeeCCcceEeeeecccccee
Q 033675 27 PESGDLALVATLNGTVHLVDTKRGESRWSFS-MGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMK 94 (114)
Q Consensus 27 ~~~~~taLVatlDGTiYLVd~~s~r~~WSFS-tGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~k 94 (114)
++.....++++-||+|.+++..+++...++. ..+||.+---.|+...++-+++|=.++.-+..-|+..
T Consensus 22 sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~ 90 (814)
T 3mkq_A 22 HPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKV 90 (814)
T ss_dssp CSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 3456677888899999999999999999998 4556665433334456777788888888887777763
No 104
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=91.67 E-value=0.75 Score=33.89 Aligned_cols=63 Identities=11% Similarity=0.088 Sum_probs=49.8
Q ss_pred CCceEEEeeCCeEEEEeCCCCeeeEEeecC--CCeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 30 GDLALVATLNGTVHLVDTKRGESRWSFSMG--KPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r~~WSFStG--sPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
....+.|+.||+|++++..+++..-.|..| +++.+- ..++...++-+++|=.+.+-+..-|+.
T Consensus 210 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~-~~sd~~~l~s~~~d~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 210 HQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSI-CCGKDYLLLSAGGDDKIFAWDWKTGKN 274 (450)
T ss_dssp CEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEE-EECSTTEEEEEESSSEEEEEETTTCCE
T ss_pred CcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEE-EECCCCEEEEEeCCCeEEEEECCCCcE
Confidence 457888999999999999999998886544 556544 222566788899999999999888886
No 105
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=91.58 E-value=2.6 Score=29.80 Aligned_cols=65 Identities=12% Similarity=0.110 Sum_probs=47.0
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeecCC---CeeeeeecC-CCCceeeeCCcceEeeeeccccce
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSMGK---PIYSSFTRN-DPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFStGs---PIYSSYqA~-~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
+.....+.++.||+|.++|..+++....+.... +|.+- ..+ +...++-+++|=.+++-+..-++.
T Consensus 236 p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~-~~s~~g~~l~~g~~d~~i~vwd~~~~~~ 304 (340)
T 1got_B 236 PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSV-SFSKSGRLLLAGYDDFNCNVWDALKADR 304 (340)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEE-EECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred CCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEE-EECCCCCEEEEECCCCeEEEEEcccCcE
Confidence 456678889999999999999999999887544 44443 333 445667777787777777666655
No 106
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=91.53 E-value=0.69 Score=36.40 Aligned_cols=65 Identities=14% Similarity=0.190 Sum_probs=49.5
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
+.....+.++.||+|.++|..+++...++..+++|.+. ..+++..++-++.|=.+.+-+...|+.
T Consensus 571 pdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~-~~sp~~~~l~~~~~~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 571 PDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHAL-CFSPNRYWLCAATEHGIKIWDLESKSI 635 (694)
T ss_dssp TTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEE-EECSSSSEEEEEETTEEEEEETTTTEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEE-EEcCCCcEEEEEcCCCEEEEECCCCCC
Confidence 35567778889999999999999999999999888765 445556666666665676666666654
No 107
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=91.44 E-value=2.9 Score=30.07 Aligned_cols=66 Identities=24% Similarity=0.179 Sum_probs=49.6
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecC--CCCceeeeCCcceEeeeecccccee
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRN--DPDFYVDVGEDWKLYFHRKGIGKMK 94 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~--~~~~fidcgdDW~LY~h~~~~GK~k 94 (114)
.....+.|+-||+|.++|..+++..=+|.. +.++.+---++ +...++-++.|=.++.-+..-|+..
T Consensus 165 ~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~ 233 (354)
T 2pbi_B 165 SDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCV 233 (354)
T ss_dssp SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEE
T ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 445677899999999999999999988874 44555432223 2356888999999999888888763
No 108
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=91.26 E-value=1 Score=29.62 Aligned_cols=64 Identities=8% Similarity=0.076 Sum_probs=44.7
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEe----e-cCCCeeeeeecC--CCCceeeeCCcceEeeeecccc
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSF----S-MGKPIYSSFTRN--DPDFYVDVGEDWKLYFHRKGIG 91 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSF----S-tGsPIYSSYqA~--~~~~fidcgdDW~LY~h~~~~G 91 (114)
+.....++|+.||+|.+++..+++..|.. . ..++|.+-.-.+ +...++-++.|=.+.+.+..-|
T Consensus 21 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~ 91 (351)
T 3f3f_A 21 FYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPD 91 (351)
T ss_dssp SSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTT
T ss_pred CCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCC
Confidence 35567788899999999999887544443 2 456676553333 3567888888877777777665
No 109
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=91.13 E-value=4.1 Score=31.62 Aligned_cols=66 Identities=11% Similarity=0.014 Sum_probs=50.6
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecCCCCceeeeCCcceEeeeecccccee
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMK 94 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~k 94 (114)
.....++++.||+|.+++..++++..++.. ..++.+.--.|+...++-++.|=.+++.+..-|+..
T Consensus 197 ~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~ 263 (814)
T 3mkq_A 197 DKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVE 263 (814)
T ss_dssp TCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEE
T ss_pred CCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 566788889999999999999999999974 445554433334456888888888888888877763
No 110
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=91.12 E-value=1.3 Score=32.66 Aligned_cols=66 Identities=14% Similarity=0.043 Sum_probs=50.4
Q ss_pred CCCCCceEEEeeCCeEEEEeCCCCeeeEEee--cCCCeeeeeecC----------CCCceeeeCCcceEeeeeccccc
Q 033675 27 PESGDLALVATLNGTVHLVDTKRGESRWSFS--MGKPIYSSFTRN----------DPDFYVDVGEDWKLYFHRKGIGK 92 (114)
Q Consensus 27 ~~~~~taLVatlDGTiYLVd~~s~r~~WSFS--tGsPIYSSYqA~----------~~~~fidcgdDW~LY~h~~~~GK 92 (114)
++.....++++.||+|++++..++++...+. ...+|.+---.| +...++-+++|=.+++.+..-|+
T Consensus 497 s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 574 (615)
T 1pgu_A 497 SPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM 574 (615)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTT
T ss_pred CCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCc
Confidence 3456677788899999999999999999986 466776553333 44567778888888888887773
No 111
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=91.00 E-value=3.6 Score=30.25 Aligned_cols=65 Identities=14% Similarity=0.160 Sum_probs=47.8
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecC-CCCceeeeCCcceEeeeeccccce
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRN-DPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~-~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
..+..+.|+.||+|.++|..+++..-+|......-.+...+ +...++-|+.|=.+.+-+..-|+.
T Consensus 203 ~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~ 268 (410)
T 1vyh_C 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKEC 268 (410)
T ss_dssp SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCce
Confidence 55677889999999999999999988887544433334444 445688888887777777666655
No 112
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=90.86 E-value=0.87 Score=31.72 Aligned_cols=65 Identities=6% Similarity=-0.054 Sum_probs=48.0
Q ss_pred CCCceEEEeeCCeEEEEeCC------------------CCeeeEEeecCCCeeeeeecCCCCceeeeCCcceEeeeeccc
Q 033675 29 SGDLALVATLNGTVHLVDTK------------------RGESRWSFSMGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGI 90 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~------------------s~r~~WSFStGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~ 90 (114)
.....++++.||+|.++|.. .+++.-.|....+|.+---.|+...++-+++|-.+++.+..-
T Consensus 157 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~ 236 (377)
T 3dwl_C 157 NNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSA 236 (377)
T ss_dssp TSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECS
T ss_pred CCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 45677888999999999974 467777776667777654344556788888898888888777
Q ss_pred cce
Q 033675 91 GKM 93 (114)
Q Consensus 91 GK~ 93 (114)
|+.
T Consensus 237 ~~~ 239 (377)
T 3dwl_C 237 PEQ 239 (377)
T ss_dssp TTS
T ss_pred CCC
Confidence 765
No 113
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=90.84 E-value=1.4 Score=31.17 Aligned_cols=64 Identities=16% Similarity=0.123 Sum_probs=45.6
Q ss_pred CCCCceEEEeeCCeEEEEeC-CCCeeeEEeecCCCeeeeeecCCCCceeeeCCcceEeeeeccccc
Q 033675 28 ESGDLALVATLNGTVHLVDT-KRGESRWSFSMGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGK 92 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~-~s~r~~WSFStGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK 92 (114)
+.....+.|+.||+|.++|. ..+++.-.+..+.+|.+- +.++...++-+|.|=.+.+-+..-++
T Consensus 223 ~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v-~~sp~~~~la~~~d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 223 PNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQI-AFNPKLQWVAVGTDQGVKIFNLMTQS 287 (343)
T ss_dssp TTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEE-EECSSSCEEEEEESSCEEEEESSSCC
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEE-EECCCCCEEEEECCCCEEEEEeCCCC
Confidence 45567778899999999998 667777788788887643 55566667778877666655544443
No 114
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=90.31 E-value=2.9 Score=28.11 Aligned_cols=64 Identities=9% Similarity=0.034 Sum_probs=47.9
Q ss_pred CCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 30 GDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
....+.++.||+|.+++..++++.-.+.. .++|.+-.-.|+...++-++.|=.+.+-+...++.
T Consensus 185 ~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~ 249 (340)
T 4aow_A 185 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH 249 (340)
T ss_dssp SCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEE
T ss_pred CcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCce
Confidence 34456678999999999999999988863 45666543334556788888998888888777766
No 115
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=89.41 E-value=5 Score=29.47 Aligned_cols=63 Identities=13% Similarity=0.126 Sum_probs=48.3
Q ss_pred CCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecC-CCCceeeeCCcceEeeeeccccce
Q 033675 30 GDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRN-DPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~-~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
....+.|+.||+|.++|..+++..-.+.. ..+|.+- ... +..+++-+++|=.+++-+..-|+.
T Consensus 308 g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v-~~~~~g~~l~s~s~D~~i~vwd~~~~~~ 372 (410)
T 1vyh_C 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGV-LFHSGGKFILSCADDKTLRVWDYKNKRC 372 (410)
T ss_dssp CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEE-EECSSSSCEEEEETTTEEEEECCTTSCC
T ss_pred CCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEE-EEcCCCCEEEEEeCCCeEEEEECCCCce
Confidence 55778899999999999999999998864 3345443 333 446788899998888888776665
No 116
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=89.30 E-value=2.4 Score=27.34 Aligned_cols=61 Identities=7% Similarity=0.089 Sum_probs=43.3
Q ss_pred EeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecCCCCceeeeCCcceEeeeeccc-cceeeec
Q 033675 36 ATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGI-GKMKDIM 97 (114)
Q Consensus 36 atlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~-GK~kl~~ 97 (114)
++.|++|++++..++++...+..+.++.+. +.++++-++=++.|=.++.-+..- |+.+...
T Consensus 18 ~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~-~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~ 79 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRVVWQTPELFEAP-NWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVD 79 (297)
T ss_dssp CCCCEEEEEEETTTTEEEEEEEESSCCEEE-EECTTSSEEEEEETTEEEEEESSSCCSCEECC
T ss_pred CCcceeEEEEeCCCCceeeeccCCcceEee-EECCCCCEEEEEcCCeEEEEeCCCCCCceEec
Confidence 357999999999999998777777777654 444444444444555899988877 7664433
No 117
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=88.87 E-value=4.2 Score=33.75 Aligned_cols=65 Identities=6% Similarity=0.050 Sum_probs=52.2
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
+.....+.++.||+|.+++..+++.........++.+. ...+++.++-++.|=.+++-+..-|+.
T Consensus 1013 ~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~v~vwd~~~~~~ 1077 (1249)
T 3sfz_A 1013 ADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDF-RLLQDSRLLSWSFDGTVKVWNVITGRI 1077 (1249)
T ss_dssp SSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEE-EECSSSEEEEEESSSEEEEEETTTTCC
T ss_pred CCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEE-EEcCCCcEEEEECCCcEEEEECCCCce
Confidence 35567778889999999999999998877777777654 455566788888998999888888876
No 118
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=88.60 E-value=2.8 Score=29.62 Aligned_cols=62 Identities=11% Similarity=0.127 Sum_probs=43.7
Q ss_pred CceEEEeeCCeEEEEeCCCCee----eEEeecCC-------------CeeeeeecCCCCceeeeCCcceEeeeeccc-cc
Q 033675 31 DLALVATLNGTVHLVDTKRGES----RWSFSMGK-------------PIYSSFTRNDPDFYVDVGEDWKLYFHRKGI-GK 92 (114)
Q Consensus 31 ~taLVatlDGTiYLVd~~s~r~----~WSFStGs-------------PIYSSYqA~~~~~fidcgdDW~LY~h~~~~-GK 92 (114)
...++|+.||+|.++|..+++. ...|.... +|.+- +.++++-++=++.+=.+++.+... |+
T Consensus 240 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~s~~g~~l~~~~~~~v~iwd~~~~~~ 318 (447)
T 3dw8_B 240 NTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDV-KFSHSGRYMMTRDYLSVKVWDLNMENR 318 (447)
T ss_dssp TEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEE-EECTTSSEEEEEESSEEEEEETTCCSS
T ss_pred cEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEE-EECCCCCEEEEeeCCeEEEEeCCCCcc
Confidence 6888999999999999999887 67776654 56554 444444444444447888888775 55
Q ss_pred e
Q 033675 93 M 93 (114)
Q Consensus 93 ~ 93 (114)
.
T Consensus 319 ~ 319 (447)
T 3dw8_B 319 P 319 (447)
T ss_dssp C
T ss_pred c
Confidence 4
No 119
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=88.53 E-value=2.2 Score=29.66 Aligned_cols=65 Identities=2% Similarity=-0.061 Sum_probs=37.1
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCe---eeEEe-ecCCCeeeeeecCCCCceeeeCCcceEeeeeccccc
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGE---SRWSF-SMGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGK 92 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r---~~WSF-StGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK 92 (114)
+.....+.++.||+|.+++..+++ +.-.+ ....+|.+---.|+...++-+++|=.+++.+..-++
T Consensus 65 ~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 133 (377)
T 3dwl_C 65 PKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQEN 133 (377)
T ss_dssp TTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC----
T ss_pred CCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcc
Confidence 345677888999999999998887 44444 344556554333355667778888777777766665
No 120
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=88.01 E-value=6.7 Score=32.53 Aligned_cols=65 Identities=14% Similarity=0.233 Sum_probs=49.9
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecC-CCCceeeeCCcceEeeeecccccee
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRN-DPDFYVDVGEDWKLYFHRKGIGKMK 94 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~-~~~~fidcgdDW~LY~h~~~~GK~k 94 (114)
......+|+.||+|.+++..+++...++.. ..+|.+- +.+ +...++-++.|=.+.+-+..-|+..
T Consensus 626 ~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~-~~s~~~~~l~s~~~d~~v~vwd~~~~~~~ 692 (1249)
T 3sfz_A 626 DGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCC-AFSSDDSYIATCSADKKVKIWDSATGKLV 692 (1249)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE-EECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEE-EEecCCCEEEEEeCCCeEEEEECCCCceE
Confidence 455667788999999999999999999874 3455443 444 4467888889988998888888763
No 121
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=87.88 E-value=3.6 Score=31.84 Aligned_cols=66 Identities=17% Similarity=0.144 Sum_probs=45.5
Q ss_pred CCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecCCCCceeeeCCcceEeeeeccc-----cceeee
Q 033675 30 GDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGI-----GKMKDI 96 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~-----GK~kl~ 96 (114)
++..++++.||+|+++|..++++.--...+..+.+ .+.+|.+-++=+..|-++|+.+..- |+.+..
T Consensus 91 pd~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~-~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~ 161 (706)
T 2z3z_A 91 GRGLVVLFTQGGLVGFDMLARKVTYLFDTNEETAS-LDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAV 161 (706)
T ss_dssp TTTEEEEEETTEEEEEETTTTEEEEEECCTTCCTT-CEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEES
T ss_pred CCCeEEEEECCEEEEEECCCCceEEccCCcccccC-CcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEe
Confidence 34566677899999999999988765554444432 3445554455556778999999887 776543
No 122
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=87.50 E-value=4.6 Score=29.61 Aligned_cols=69 Identities=7% Similarity=-0.048 Sum_probs=44.2
Q ss_pred CCCceEEEeeCCeEEEEeCCCCee--eEEee-cCCCeeeeeecC-CCCceeeeCCcceEeeeeccccceeeec
Q 033675 29 SGDLALVATLNGTVHLVDTKRGES--RWSFS-MGKPIYSSFTRN-DPDFYVDVGEDWKLYFHRKGIGKMKDIM 97 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~--~WSFS-tGsPIYSSYqA~-~~~~fidcgdDW~LY~h~~~~GK~kl~~ 97 (114)
.+.+..+|+.||+|.+++..+++. .-.+. -.++|.+-.=.| +...++-|+.|=.+.+-+..-+..+...
T Consensus 131 ~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 203 (435)
T 4e54_B 131 HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFA 203 (435)
T ss_dssp CTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEE
T ss_pred CCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEe
Confidence 445677899999999998776653 33332 345676542222 3456888999977766666555444433
No 123
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=87.46 E-value=5.6 Score=27.65 Aligned_cols=66 Identities=11% Similarity=0.025 Sum_probs=49.1
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecC-CCeeeeeecCCCCceeeeCCcceEeeeecccccee
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMG-KPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMK 94 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStG-sPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~k 94 (114)
.....+.|+.||+|.++|..+++..-.+..- .++.+.--.|+...++-+++|=.+.+-+..-|+..
T Consensus 197 ~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~ 263 (304)
T 2ynn_A 197 DKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVE 263 (304)
T ss_dssp TCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEE
T ss_pred CCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCcee
Confidence 3456788999999999999999999888643 45554332334456888999988888787777763
No 124
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=86.45 E-value=6.7 Score=27.54 Aligned_cols=61 Identities=20% Similarity=0.201 Sum_probs=43.5
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecCCCCceeeeCCcceEeeeec
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRNDPDFYVDVGEDWKLYFHRK 88 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~~~~~fidcgdDW~LY~h~~ 88 (114)
+.....+.|+.||+|.++|..+++..-.|.. .+++.+---.++...++-++.|=.+.+-+.
T Consensus 75 ~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~ 136 (319)
T 3frx_A 75 ADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI 136 (319)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEET
T ss_pred CCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 4556778899999999999999999888863 345655422334466788888865555554
No 125
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=86.04 E-value=7.1 Score=30.65 Aligned_cols=62 Identities=23% Similarity=0.235 Sum_probs=46.7
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecCCCCceeeeCCcceEeeeecc
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRNDPDFYVDVGEDWKLYFHRKG 89 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~~~~~fidcgdDW~LY~h~~~ 89 (114)
+.....+.++.||+|.++|..+++..-.|.. ..+|.+---.++...++-|+.|=.+.+.+..
T Consensus 440 ~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~ 502 (694)
T 3dm0_A 440 SDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTL 502 (694)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred CCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECC
Confidence 3556778899999999999999999888853 4566655333466778899999777766643
No 126
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=85.59 E-value=8.1 Score=27.72 Aligned_cols=66 Identities=12% Similarity=0.068 Sum_probs=47.2
Q ss_pred CCCceEEEee--CCeEEEEeCCCCeeeEEeecCCCeeeeeecCCCCceeeeCCc----------ceEeeeecccccee
Q 033675 29 SGDLALVATL--NGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPDFYVDVGED----------WKLYFHRKGIGKMK 94 (114)
Q Consensus 29 ~~~taLVatl--DGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~~~fidcgdD----------W~LY~h~~~~GK~k 94 (114)
..+..+|+.. +++|+.+|..++++.+.+..|.-...-...++...|+-|..+ =.+|.-+..-|+..
T Consensus 139 ~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~ 216 (328)
T 3dsm_A 139 YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVE 216 (328)
T ss_dssp ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEE
T ss_pred ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEE
Confidence 5667788874 899999999999999999887643333333344456666544 47888888777763
No 127
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=85.45 E-value=1.5 Score=35.61 Aligned_cols=64 Identities=5% Similarity=0.021 Sum_probs=46.4
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEE----eec-CCCeeeeeecCC---CCceeeeCCcceEeeeeccccc
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWS----FSM-GKPIYSSFTRND---PDFYVDVGEDWKLYFHRKGIGK 92 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WS----FSt-GsPIYSSYqA~~---~~~fidcgdDW~LY~h~~~~GK 92 (114)
.+...++++.||+|+++|..+++..|. +.. .++|.+---.|+ ...++-++.|-.+++-+...|+
T Consensus 169 d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 169 ESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp GGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred CCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence 467889999999999999888754443 332 556665533334 4678889999998888877764
No 128
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=85.29 E-value=4 Score=33.15 Aligned_cols=65 Identities=9% Similarity=0.105 Sum_probs=49.5
Q ss_pred CCCCceEEEeeCCeEEEEeCC--CCeeeEEeec-CCCeeeeeecCC--CCceeeeCCcceEeeeeccccc
Q 033675 28 ESGDLALVATLNGTVHLVDTK--RGESRWSFSM-GKPIYSSFTRND--PDFYVDVGEDWKLYFHRKGIGK 92 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~--s~r~~WSFSt-GsPIYSSYqA~~--~~~fidcgdDW~LY~h~~~~GK 92 (114)
+.....++|+.||+|.+++.. +++....+.. ..+|++---.++ ...++-++.|-.+++-+..-|+
T Consensus 19 ~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~ 88 (753)
T 3jro_A 19 YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR 88 (753)
T ss_dssp SSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTE
T ss_pred CCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 345677888899999999876 6677878763 467776533344 5678899999999998888776
No 129
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=85.19 E-value=5.9 Score=28.56 Aligned_cols=61 Identities=20% Similarity=0.052 Sum_probs=42.4
Q ss_pred CCCCCceEEEeeCCeEEEEeCCCCeeeEEee-----cCCCeeeeeecCCCCceeeeCCcceEeeee
Q 033675 27 PESGDLALVATLNGTVHLVDTKRGESRWSFS-----MGKPIYSSFTRNDPDFYVDVGEDWKLYFHR 87 (114)
Q Consensus 27 ~~~~~taLVatlDGTiYLVd~~s~r~~WSFS-----tGsPIYSSYqA~~~~~fidcgdDW~LY~h~ 87 (114)
++.....+.++-||+|+++|..+++....+. -..+|.+---.|+...++-++.|=.+.+-+
T Consensus 307 s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~ 372 (380)
T 3iz6_a 307 SISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWA 372 (380)
T ss_dssp CSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred CCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEe
Confidence 3466777888899999999999999988873 234555442333556778888885555444
No 130
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=83.89 E-value=10 Score=27.35 Aligned_cols=67 Identities=15% Similarity=0.129 Sum_probs=45.6
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeecCCC-------eeeeeecCCC-CceeeeCCcceEeeeecccccee
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSMGKP-------IYSSFTRNDP-DFYVDVGEDWKLYFHRKGIGKMK 94 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFStGsP-------IYSSYqA~~~-~~fidcgdDW~LY~h~~~~GK~k 94 (114)
+.....+.|+.||+|.++|..+++..-.+..... .-.+...+++ ..++-.++|=.+++-+...|+..
T Consensus 259 p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~ 333 (380)
T 3iz6_a 259 PDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMV 333 (380)
T ss_dssp TTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEE
T ss_pred cCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceE
Confidence 3556677889999999999999999877764321 2233344444 45556667777777777666653
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=83.54 E-value=6.8 Score=25.17 Aligned_cols=62 Identities=8% Similarity=-0.067 Sum_probs=35.3
Q ss_pred EEEeeCCeEEEEeCCC-CeeeEEeecC--CCeeeeeecCCC-CceeeeC----CcceEeeeeccccceeee
Q 033675 34 LVATLNGTVHLVDTKR-GESRWSFSMG--KPIYSSFTRNDP-DFYVDVG----EDWKLYFHRKGIGKMKDI 96 (114)
Q Consensus 34 LVatlDGTiYLVd~~s-~r~~WSFStG--sPIYSSYqA~~~-~~fidcg----dDW~LY~h~~~~GK~kl~ 96 (114)
|+.+-||+|++++..+ +++.-.+... ..+. +.+.+++ ..++=+. ...++|..+..-|+.+..
T Consensus 56 l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~ 125 (297)
T 2ojh_A 56 LLLNSEGLLYRLSLAGDPSPEKVDTGFATICNN-DHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLM 125 (297)
T ss_dssp EEEEETTEEEEEESSSCCSCEECCCTTCCCBCS-CCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEEC
T ss_pred EEEEcCCeEEEEeCCCCCCceEecccccccccc-ceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEe
Confidence 4445599999999988 7766444322 2222 2344433 3333333 257888887766665443
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=82.98 E-value=8.8 Score=26.04 Aligned_cols=63 Identities=10% Similarity=-0.010 Sum_probs=44.5
Q ss_pred CCceEE-EeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecCC-CC-ceeeeCCcceEeeeeccccce
Q 033675 30 GDLALV-ATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRND-PD-FYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 30 ~~taLV-atlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~-~~-~fidcgdDW~LY~h~~~~GK~ 93 (114)
.+.++| +.-||+|+++|..+++....+..+..-- ....++ .. .|+-+.+|-+++.-+..-|+.
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~ 74 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP 74 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSC
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce
Confidence 444444 4568999999999999998887653222 334443 33 577777777999999888884
No 133
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=82.72 E-value=8 Score=28.37 Aligned_cols=61 Identities=8% Similarity=-0.111 Sum_probs=40.4
Q ss_pred eEEEeeCCeEEEEeCC--CCeeeEEee---cCCCeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 33 ALVATLNGTVHLVDTK--RGESRWSFS---MGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 33 aLVatlDGTiYLVd~~--s~r~~WSFS---tGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
+++++.||+|.+++.. +++..-.+. .+.++.+---.|+...++-++.|-.++.-+..-|+.
T Consensus 118 ~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~ 183 (450)
T 2vdu_B 118 IACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPE 183 (450)
T ss_dssp EEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCC
T ss_pred EEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccc
Confidence 4567789999999988 888887774 345555432223445566666777777766555543
No 134
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=82.32 E-value=8.3 Score=30.04 Aligned_cols=66 Identities=15% Similarity=0.124 Sum_probs=48.3
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEee--------cCCCeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFS--------MGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFS--------tGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
+.......|+.||+|.+++..+++..-.|. -..++++---.|+...++-++.|=.+.+-+..-|+.
T Consensus 200 pdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~ 273 (611)
T 1nr0_A 200 PDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKV 273 (611)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred CCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCce
Confidence 345566778999999999999999888873 335666543334556788899997777777776665
No 135
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=82.30 E-value=8.4 Score=27.19 Aligned_cols=67 Identities=12% Similarity=0.082 Sum_probs=42.8
Q ss_pred CCCCCceEEEeeCCeEEEEeCCCCe-----------eeEEeecC-------------CCeeeeeecCCC--CceeeeCCc
Q 033675 27 PESGDLALVATLNGTVHLVDTKRGE-----------SRWSFSMG-------------KPIYSSFTRNDP--DFYVDVGED 80 (114)
Q Consensus 27 ~~~~~taLVatlDGTiYLVd~~s~r-----------~~WSFStG-------------sPIYSSYqA~~~--~~fidcgdD 80 (114)
++.....++|+.||+|.+++..+++ +.-.|..- ++|.+---.|+. ..++-++.|
T Consensus 37 s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d 116 (447)
T 3dw8_B 37 NHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTND 116 (447)
T ss_dssp CSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECS
T ss_pred CCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCC
Confidence 3456677788999999999988887 35555433 445544333333 468888888
Q ss_pred ceEeeeeccccce
Q 033675 81 WKLYFHRKGIGKM 93 (114)
Q Consensus 81 W~LY~h~~~~GK~ 93 (114)
=.+.+-+..-++.
T Consensus 117 ~~i~iw~~~~~~~ 129 (447)
T 3dw8_B 117 KTIKLWKISERDK 129 (447)
T ss_dssp SCEEEEEEEEEEE
T ss_pred CeEEEEecccccC
Confidence 7777666655443
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=82.18 E-value=12 Score=29.61 Aligned_cols=60 Identities=12% Similarity=0.049 Sum_probs=39.8
Q ss_pred ceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecC-CCCc-eeeeCCcceEeeeec--cccce
Q 033675 32 LALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRN-DPDF-YVDVGEDWKLYFHRK--GIGKM 93 (114)
Q Consensus 32 taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~-~~~~-fidcgdDW~LY~h~~--~~GK~ 93 (114)
+...+..||+|.++|..++++...+..|...++. ..+ +..+ |+-..| =.+++-+. .-|+.
T Consensus 151 ~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v-~~spdg~~l~v~~~d-~~V~v~D~~~~t~~~ 214 (543)
T 1nir_A 151 FSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHIS-RMSASGRYLLVIGRD-ARIDMIDLWAKEPTK 214 (543)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEE-EECTTSCEEEEEETT-SEEEEEETTSSSCEE
T ss_pred EEEEEcCCCeEEEEECCCceEEEEEecCcccceE-EECCCCCEEEEECCC-CeEEEEECcCCCCcE
Confidence 3344556899999999999999999998886644 333 3333 444444 45666665 44554
No 137
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=81.87 E-value=9.6 Score=29.05 Aligned_cols=63 Identities=5% Similarity=-0.107 Sum_probs=42.5
Q ss_pred CCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 30 GDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
+...+.++.||+|.++|..+++....... +.++.+--=-|+...++-++.|=.++.-+.+ |+.
T Consensus 162 ~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~ 225 (434)
T 2oit_A 162 PSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQE 225 (434)
T ss_dssp TTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCE
T ss_pred CCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Ccc
Confidence 45666789999999999999877665543 4556554222344556666677677777776 554
No 138
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=81.72 E-value=9.9 Score=32.22 Aligned_cols=65 Identities=17% Similarity=0.109 Sum_probs=49.3
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
+...+..+|+.||+|++++..+++..-.+....+|.+-- ..++...+-+++|=.+.+-+..-|+.
T Consensus 27 pdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~-fspg~~L~S~s~D~~v~lWd~~~~~~ 91 (902)
T 2oaj_A 27 FTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMR-FVKGIYLVVINAKDTVYVLSLYSQKV 91 (902)
T ss_dssp TTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEE-EETTTEEEEEETTCEEEEEETTTCSE
T ss_pred CCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEE-EcCCCEEEEEECcCeEEEEECCCCcE
Confidence 355677888999999999999999888777777887653 22344678888887777777766664
No 139
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=81.12 E-value=12 Score=27.46 Aligned_cols=64 Identities=8% Similarity=-0.040 Sum_probs=45.0
Q ss_pred CCCceEEEeeCCeEEEEeCCCC---eeeEEee-cCCCeeeeeecCCCC-ceeeeCCcceEeeeeccccc
Q 033675 29 SGDLALVATLNGTVHLVDTKRG---ESRWSFS-MGKPIYSSFTRNDPD-FYVDVGEDWKLYFHRKGIGK 92 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~---r~~WSFS-tGsPIYSSYqA~~~~-~fidcgdDW~LY~h~~~~GK 92 (114)
.....++++-||+|+++|..++ ++.+.+. .++++.+---.|+.. .++-+++|-.+.+.+.+.++
T Consensus 243 ~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~ 311 (430)
T 2xyi_A 243 HESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 311 (430)
T ss_dssp CTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT
T ss_pred CCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC
Confidence 3455567778999999999887 6888884 445665442223333 47788899888888877644
No 140
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=81.01 E-value=13 Score=26.64 Aligned_cols=72 Identities=11% Similarity=0.088 Sum_probs=45.5
Q ss_pred CceEEEe-eCCeEEEEeCCCCeeeEEeecCC-------CeeeeeecCCCCceeee-CCcceEeeeeccccce-eeecccC
Q 033675 31 DLALVAT-LNGTVHLVDTKRGESRWSFSMGK-------PIYSSFTRNDPDFYVDV-GEDWKLYFHRKGIGKM-KDIMKST 100 (114)
Q Consensus 31 ~taLVat-lDGTiYLVd~~s~r~~WSFStGs-------PIYSSYqA~~~~~fidc-gdDW~LY~h~~~~GK~-kl~~~s~ 100 (114)
+.++|+. .+|+|+.+|..++++.+.+..|. |..-.+ .+...|+-. |.+=+++.-+..-|+. +.+....
T Consensus 95 g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~ 172 (328)
T 3dsm_A 95 EKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI 172 (328)
T ss_dssp TEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS
T ss_pred CeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC
Confidence 4667777 79999999999999999999876 322121 233345543 2234677777777765 3333333
Q ss_pred CCce
Q 033675 101 TPNC 104 (114)
Q Consensus 101 ~~~~ 104 (114)
.|++
T Consensus 173 ~p~~ 176 (328)
T 3dsm_A 173 QPTS 176 (328)
T ss_dssp CBCC
T ss_pred Cccc
Confidence 4544
No 141
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=79.66 E-value=0.38 Score=34.07 Aligned_cols=14 Identities=43% Similarity=0.467 Sum_probs=0.0
Q ss_pred CchhhHHHHHHHHH
Q 033675 1 MRRSLIFLLLLTVI 14 (114)
Q Consensus 1 mrr~li~ll~~~v~ 14 (114)
|||.+++++++++.
T Consensus 1 M~~~~~~~~~l~~~ 14 (294)
T 3m8t_A 1 MRRLTAALCALTLL 14 (294)
T ss_dssp --------------
T ss_pred CchHHHHHHHHHHh
Confidence 88877666555433
No 142
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=75.46 E-value=19 Score=25.50 Aligned_cols=64 Identities=8% Similarity=0.084 Sum_probs=42.4
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCe--eeEEeec-CCCeeeeeecCCCCceeeeCCcceEeeeecccc
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGE--SRWSFSM-GKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIG 91 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r--~~WSFSt-GsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~G 91 (114)
+.....+.|+.||+|.+++..+++ ..-.+.. ..+|.+---.|+...++-|+.|=.+++-+..-+
T Consensus 71 p~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~ 137 (345)
T 3fm0_A 71 PCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEE 137 (345)
T ss_dssp TTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTT
T ss_pred CCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCC
Confidence 456677888999999999877764 4445542 345655433345567888888877777665544
No 143
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=75.10 E-value=16 Score=26.75 Aligned_cols=59 Identities=17% Similarity=0.148 Sum_probs=42.3
Q ss_pred ceEEEeeCCeEEEEeCCC-CeeeEEee-cCCCeeeeeecCCC-CceeeeCCcceEeeeeccc
Q 033675 32 LALVATLNGTVHLVDTKR-GESRWSFS-MGKPIYSSFTRNDP-DFYVDVGEDWKLYFHRKGI 90 (114)
Q Consensus 32 taLVatlDGTiYLVd~~s-~r~~WSFS-tGsPIYSSYqA~~~-~~fidcgdDW~LY~h~~~~ 90 (114)
..++++.||+|.++|..+ +++.-.|. ...+|.+---.|+. ..++-++.|=.+.+.+...
T Consensus 292 ~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 292 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp EEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred EEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 566889999999999987 56777776 35566655333334 3488888887777777655
No 144
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=73.11 E-value=4.9 Score=28.89 Aligned_cols=36 Identities=17% Similarity=0.268 Sum_probs=30.4
Q ss_pred CCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeee
Q 033675 30 GDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSS 65 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSS 65 (114)
+..+++++-||+|.++|..++++.-++...+++.+-
T Consensus 71 ~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v 106 (355)
T 3vu4_A 71 NYVAFVTGVKEVVHIWDDVKKQDVSRIKVDAPVKDL 106 (355)
T ss_dssp SEEEEECSSTTEEEEEETTTTEEEEEEECSSCEEEE
T ss_pred CEEEEEECCccEEEEEECCCCcEEEEEECCCceEEE
Confidence 445678889999999999999999999888887654
No 145
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=70.94 E-value=32 Score=27.19 Aligned_cols=66 Identities=14% Similarity=0.055 Sum_probs=43.8
Q ss_pred CCCCCceEEEeeCCeEEEEeC--CCCeeeEEeecCCCeeeeeecCC----CC--ceeeeCCcceEeeeeccccce
Q 033675 27 PESGDLALVATLNGTVHLVDT--KRGESRWSFSMGKPIYSSFTRND----PD--FYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 27 ~~~~~taLVatlDGTiYLVd~--~s~r~~WSFStGsPIYSSYqA~~----~~--~fidcgdDW~LY~h~~~~GK~ 93 (114)
++...+.+|++.||+|.++|. .++++.-++..|.-.++- ..++ .+ .|+-+..|=++-.-+..-++.
T Consensus 187 spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~v-a~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~ 260 (543)
T 1nir_A 187 SASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSV-ESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEP 260 (543)
T ss_dssp CTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEE-EECCSTTCTTTEEEEEEEESSEEEEEETTTCCE
T ss_pred CCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceE-EeCCCcCCCCCEEEEEEccCCeEEEEecccccc
Confidence 457778999999999999999 899999998877654432 3333 32 244444444454445444443
No 146
>2l4j_A YES-associated protein 2 (YAP2); WW domain, medaka, transcription; NMR {Oryzias latipes}
Probab=70.81 E-value=9.1 Score=22.49 Aligned_cols=37 Identities=22% Similarity=0.448 Sum_probs=27.0
Q ss_pred CCCCCCCCCCCCCceEEEeeCCeEEEEeCCCCeeeEE
Q 033675 19 PPTSPRASPESGDLALVATLNGTVHLVDTKRGESRWS 55 (114)
Q Consensus 19 p~~s~~~~~~~~~taLVatlDGTiYLVd~~s~r~~WS 55 (114)
|..++...++-+.-.-..+-+|.+|+++..+++--|.
T Consensus 3 ~~~~~~~~~LP~gWe~~~~~~G~~Yyinh~t~~TtWe 39 (46)
T 2l4j_A 3 PNSSPASGPLPEGWEQAITPEGEIYYINHKNKTTSWL 39 (46)
T ss_dssp TTTSTTTSCCCTTCEEEECTTSCEEEEETTTTEEECS
T ss_pred CccCCcCCCCCcCceeEECCCCCEEEEECCCCCEeCC
Confidence 4444444555566666666899999999999998884
No 147
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=69.82 E-value=15 Score=28.63 Aligned_cols=54 Identities=13% Similarity=0.081 Sum_probs=35.5
Q ss_pred CCeEEEEeCCCCeee--EEeecCCCeeeeeecCCCCceeeeCCcceEeeeeccccceee
Q 033675 39 NGTVHLVDTKRGESR--WSFSMGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMKD 95 (114)
Q Consensus 39 DGTiYLVd~~s~r~~--WSFStGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~kl 95 (114)
||+|++++..+|+.. .... ..+. +.+.+|.+-+|-+..|-++|..+..-|+.+.
T Consensus 89 ~~~i~~~d~~~g~~~~~~~l~--~~~~-~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~ 144 (719)
T 1z68_A 89 TATYYIYDLSNGEFVRGNELP--RPIQ-YLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQ 144 (719)
T ss_dssp EEEEEEEETTTTEECCSSCCC--SSBC-CEEECSSTTCEEEEETTEEEEESSTTSCCEE
T ss_pred ceEEEEEECCCCccccceecC--cccc-cceECCCCCEEEEEECCeEEEEeCCCCCcEE
Confidence 799999999999874 2232 2222 2234455445555567799999988887643
No 148
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=69.16 E-value=15 Score=26.21 Aligned_cols=62 Identities=11% Similarity=0.144 Sum_probs=37.7
Q ss_pred CCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecCCCCceeeeCCcceEeeeecccccee
Q 033675 30 GDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMK 94 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~k 94 (114)
+.+.++...+|+|+.++.++++.. .+..+..+++-...++...++-+.+ .||.-+..-|+.+
T Consensus 61 ~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~~~v~~i~~~~dg~l~v~~~~--gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 61 GTAWWFNILERELHELHLASGRKT-VHALPFMGSALAKISDSKQLIASDD--GLFLRDTATGVLT 122 (326)
T ss_dssp TEEEEEEGGGTEEEEEETTTTEEE-EEECSSCEEEEEEEETTEEEEEETT--EEEEEETTTCCEE
T ss_pred CEEEEEECCCCEEEEEECCCCcEE-EEECCCcceEEEEeCCCeEEEEECC--CEEEEECCCCcEE
Confidence 344445556788888888877654 2333455555544445556666544 4777777667664
No 149
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=69.07 E-value=3 Score=27.29 Aligned_cols=57 Identities=16% Similarity=0.253 Sum_probs=15.8
Q ss_pred CchhhHHHHHHHHHhhcCCCCCCCCCCCCCCceEEEeeCCeEEEE----eCCCCeeeEEee
Q 033675 1 MRRSLIFLLLLTVILSSLPPTSPRASPESGDLALVATLNGTVHLV----DTKRGESRWSFS 57 (114)
Q Consensus 1 mrr~li~ll~~~v~l~s~p~~s~~~~~~~~~taLVatlDGTiYLV----d~~s~r~~WSFS 57 (114)
|+|.+.++|++++++..++..+.++.-..+...+.+....++-|- ......+.|...
T Consensus 1 M~~~~~~ll~~~~l~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 61 (237)
T 3sob_L 1 MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQ 61 (237)
T ss_dssp -----------------------CCCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEE
T ss_pred CCcchhHHHHHHHHHHhhcccCccceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEE
Confidence 777776666665555555554444332222223444555555554 123557888663
No 150
>2ez5_W Dnedd4, E3 ubiquitin-protein ligase NEDD4; WW domain, PY motif, binding affinity, signalling protein,ligase; NMR {Drosophila melanogaster}
Probab=68.87 E-value=9 Score=22.46 Aligned_cols=34 Identities=18% Similarity=0.361 Sum_probs=25.4
Q ss_pred CCCCCCCCCCceEEEeeCCeEEEEeCCCCeeeEE
Q 033675 22 SPRASPESGDLALVATLNGTVHLVDTKRGESRWS 55 (114)
Q Consensus 22 s~~~~~~~~~taLVatlDGTiYLVd~~s~r~~WS 55 (114)
++....+-+.-.-..+.+|.+|+++..+++--|.
T Consensus 5 ~~~~~~LP~gWe~~~~~~Gr~Yyinh~t~~TtW~ 38 (46)
T 2ez5_W 5 SGEEEPLPPRWSMQVAPNGRTFFIDHASRRTTWI 38 (46)
T ss_dssp SCCSCCCCTTEEEEECTTSSEEEEETTTTEEESB
T ss_pred CCCCCCCCcCcEEEEcCCCCEEEEECCCCCEecc
Confidence 4444455566666666799999999999998884
No 151
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=66.50 E-value=29 Score=23.89 Aligned_cols=65 Identities=9% Similarity=0.114 Sum_probs=43.3
Q ss_pred CCCCceEEEeeCCeEEEEeCCC--CeeeEEee-cCCCeeeeeecCC--CCceeeeCCcceEeeeeccccc
Q 033675 28 ESGDLALVATLNGTVHLVDTKR--GESRWSFS-MGKPIYSSFTRND--PDFYVDVGEDWKLYFHRKGIGK 92 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s--~r~~WSFS-tGsPIYSSYqA~~--~~~fidcgdDW~LY~h~~~~GK 92 (114)
+.....+.|+.||+|.+++... ++..=.|. -..++++--=.++ ...++-|+.|-.+.+-+..-|+
T Consensus 19 ~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~ 88 (297)
T 2pm7_B 19 YYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGR 88 (297)
T ss_dssp TTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSC
T ss_pred CCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCc
Confidence 4456777889999999998764 45555553 2356665422222 4568889999877777766664
No 152
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=66.20 E-value=38 Score=25.15 Aligned_cols=68 Identities=12% Similarity=0.114 Sum_probs=41.2
Q ss_pred CCCCceEEEeeCC---eEEEEeCCCCeeeEEeecCCCeeeeeecCCCCc--eeee--CCcceEeeeeccccceeee
Q 033675 28 ESGDLALVATLNG---TVHLVDTKRGESRWSFSMGKPIYSSFTRNDPDF--YVDV--GEDWKLYFHRKGIGKMKDI 96 (114)
Q Consensus 28 ~~~~taLVatlDG---TiYLVd~~s~r~~WSFStGsPIYSSYqA~~~~~--fidc--gdDW~LY~h~~~~GK~kl~ 96 (114)
+.....++++.|+ +|+++|..+|+..--......+. +.+.+|.+- ++-+ +.++++|.-+..-|+.+..
T Consensus 188 pdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~-~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l 262 (415)
T 2hqs_A 188 PDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNG-APAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQV 262 (415)
T ss_dssp TTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEE-EEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEC
T ss_pred CCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCccc-CEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeC
Confidence 3444555666665 99999999998874333333333 334444432 2233 3367899998887776433
No 153
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=65.24 E-value=27 Score=23.22 Aligned_cols=66 Identities=12% Similarity=0.077 Sum_probs=39.5
Q ss_pred CCCCceEEEee-CCeEEEEeC---CCCeeeEEeecCCCeeeeeecCCC-CceeeeCCcceEeeeeccc-cce
Q 033675 28 ESGDLALVATL-NGTVHLVDT---KRGESRWSFSMGKPIYSSFTRNDP-DFYVDVGEDWKLYFHRKGI-GKM 93 (114)
Q Consensus 28 ~~~~taLVatl-DGTiYLVd~---~s~r~~WSFStGsPIYSSYqA~~~-~~fidcgdDW~LY~h~~~~-GK~ 93 (114)
+.....++++. ||+|++++. .++++.-.+..+..+++---.|+. ..|+-+..|=+++.-+..- |+.
T Consensus 93 ~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 164 (343)
T 1ri6_A 93 HQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL 164 (343)
T ss_dssp TTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred CCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce
Confidence 34445556654 889999988 566777777777665543222232 2455553455676666555 655
No 154
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A
Probab=65.09 E-value=24 Score=22.59 Aligned_cols=22 Identities=14% Similarity=0.339 Sum_probs=12.1
Q ss_pred ceEEEeeCCeEEEEeCCCCeeeEE
Q 033675 32 LALVATLNGTVHLVDTKRGESRWS 55 (114)
Q Consensus 32 taLVatlDGTiYLVd~~s~r~~WS 55 (114)
..++-.-||.+.+.+ +++++|+
T Consensus 52 ~~l~l~~~GNLvl~d--~~~~~W~ 73 (112)
T 1xd5_A 52 CVLKMQNDGNLVIYS--GSRAIWA 73 (112)
T ss_dssp EEEEECTTSCEEEEE--TTEEEEE
T ss_pred EEEEEeCCCCEEEEc--CCEEEEE
Confidence 344444566666665 4556665
No 155
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=64.84 E-value=25 Score=29.76 Aligned_cols=63 Identities=19% Similarity=0.165 Sum_probs=46.0
Q ss_pred CCceEEEeeCCeEEEEeCCCCeeeEEeecC-------------------CCeeeeeecCCCCceeeeCCcceEeeeeccc
Q 033675 30 GDLALVATLNGTVHLVDTKRGESRWSFSMG-------------------KPIYSSFTRNDPDFYVDVGEDWKLYFHRKGI 90 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r~~WSFStG-------------------sPIYSSYqA~~~~~fidcgdDW~LY~h~~~~ 90 (114)
....++|+-||+| ++|..++++.-.|... .++.+--=-|+...++-+++|=.+.+-+..-
T Consensus 164 ~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~ 242 (902)
T 2oaj_A 164 IGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANS 242 (902)
T ss_dssp EEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTT
T ss_pred CCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Confidence 3578899999999 9999999998887643 3455432223445688888997777777776
Q ss_pred cce
Q 033675 91 GKM 93 (114)
Q Consensus 91 GK~ 93 (114)
|+.
T Consensus 243 g~~ 245 (902)
T 2oaj_A 243 GHM 245 (902)
T ss_dssp CCE
T ss_pred CcE
Confidence 764
No 156
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*
Probab=64.19 E-value=16 Score=23.74 Aligned_cols=23 Identities=17% Similarity=0.395 Sum_probs=14.4
Q ss_pred ceEEEeeCCeEEEEeCCCCeeeEE
Q 033675 32 LALVATLNGTVHLVDTKRGESRWS 55 (114)
Q Consensus 32 taLVatlDGTiYLVd~~s~r~~WS 55 (114)
..|+-.-||.+.+.+. .++++|+
T Consensus 53 ~~l~l~~~GnLvl~d~-~~~~vW~ 75 (115)
T 2dpf_A 53 CRLTLLSDGNLVIYDH-NNNDVWG 75 (115)
T ss_dssp CEEEECTTSCEEEECT-TCCEEEE
T ss_pred eEEEECCCCcEEEECC-CceEEEE
Confidence 4455556777777764 4567775
No 157
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=64.16 E-value=33 Score=23.76 Aligned_cols=70 Identities=13% Similarity=0.015 Sum_probs=39.5
Q ss_pred CCCCCceEEEeeCCeEEEEeCCCCeee--EEeecCCCeeeeeecCCCCcee-----------------------eeCCcc
Q 033675 27 PESGDLALVATLNGTVHLVDTKRGESR--WSFSMGKPIYSSFTRNDPDFYV-----------------------DVGEDW 81 (114)
Q Consensus 27 ~~~~~taLVatlDGTiYLVd~~s~r~~--WSFStGsPIYSSYqA~~~~~fi-----------------------dcgdDW 81 (114)
++.....++++.|++||+++..+++.. +.+..+..-+..+.+++.+-++ ..+.+-
T Consensus 89 spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (388)
T 3pe7_A 89 SPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCC 168 (388)
T ss_dssp CTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCE
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcc
Confidence 345555666777889999998888754 3333332222222223222222 133456
Q ss_pred eEeeeeccccceeee
Q 033675 82 KLYFHRKGIGKMKDI 96 (114)
Q Consensus 82 ~LY~h~~~~GK~kl~ 96 (114)
+||.-+..-|+.+..
T Consensus 169 ~l~~~d~~~g~~~~l 183 (388)
T 3pe7_A 169 RLMRVDLKTGESTVI 183 (388)
T ss_dssp EEEEEETTTCCEEEE
T ss_pred eEEEEECCCCceEEe
Confidence 788888777776444
No 158
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=63.80 E-value=34 Score=23.72 Aligned_cols=65 Identities=14% Similarity=0.079 Sum_probs=38.6
Q ss_pred ceEEEeeCC--eEEEEeCCCCeeeEEeecCC-CeeeeeecCCCCceeeeCCcceEeeeeccccceeee
Q 033675 32 LALVATLNG--TVHLVDTKRGESRWSFSMGK-PIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMKDI 96 (114)
Q Consensus 32 taLVatlDG--TiYLVd~~s~r~~WSFStGs-PIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~kl~ 96 (114)
+++++..|| .||+++..++++.--..... ++++..-.|+....+=..+|..+|.-+..-|+.+..
T Consensus 50 l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~ 117 (388)
T 3pe7_A 50 LLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVV 117 (388)
T ss_dssp EEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred EEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceee
Confidence 444444478 49999999998875443222 222222222334444445678899888888876543
No 159
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=62.02 E-value=37 Score=23.64 Aligned_cols=64 Identities=14% Similarity=0.193 Sum_probs=43.1
Q ss_pred CCCceEEEeeCCeEEEEeCCCCe--eeEEee-cCCCeeeeeecC--CCCceeeeCCcceEeeeeccccc
Q 033675 29 SGDLALVATLNGTVHLVDTKRGE--SRWSFS-MGKPIYSSFTRN--DPDFYVDVGEDWKLYFHRKGIGK 92 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r--~~WSFS-tGsPIYSSYqA~--~~~~fidcgdDW~LY~h~~~~GK 92 (114)
.....+.|+.||+|.++|..+++ ..-.|. -..++++--=.+ +...++-|+.|=.+.+-+..-|+
T Consensus 24 ~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~ 92 (316)
T 3bg1_A 24 YGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGT 92 (316)
T ss_dssp GGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSC
T ss_pred CCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCc
Confidence 45567778899999999988765 345554 235676542222 24678889988777776666554
No 160
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=61.19 E-value=34 Score=22.90 Aligned_cols=57 Identities=18% Similarity=0.225 Sum_probs=33.1
Q ss_pred eeCCeEEEEeCCCCeeeEEeec------CCCeeeeeecCC-CCceeeeCCcceEeeeeccccceeee
Q 033675 37 TLNGTVHLVDTKRGESRWSFSM------GKPIYSSFTRND-PDFYVDVGEDWKLYFHRKGIGKMKDI 96 (114)
Q Consensus 37 tlDGTiYLVd~~s~r~~WSFSt------GsPIYSSYqA~~-~~~fidcgdDW~LY~h~~~~GK~kl~ 96 (114)
+.+|+|+.++..+++.. .+.. +..+++-...++ ...|+-..++ .++.-+.. |+.+..
T Consensus 43 ~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~-~l~~~d~~-g~~~~~ 106 (314)
T 1pjx_A 43 KPAGEILRIDLKTGKKT-VICKPEVNGYGGIPAGCQCDRDANQLFVADMRL-GLLVVQTD-GTFEEI 106 (314)
T ss_dssp EECCEEEEECTTTCCEE-EEECCEETTEECCEEEEEECSSSSEEEEEETTT-EEEEEETT-SCEEEC
T ss_pred CCCCEEEEEeCCCCcEE-EEEecccCCCCCCCceEEEecCCCcEEEEECCC-CEEEEeCC-CCEEEE
Confidence 67889999987777764 2322 122333333334 3346654444 78887777 877543
No 161
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=60.62 E-value=32 Score=23.95 Aligned_cols=64 Identities=16% Similarity=0.081 Sum_probs=37.3
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecCCCCceeeeCCcceEeeeeccccceee
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMKD 95 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~kl 95 (114)
...+.++...+++||.++..+++.. .+..+..+.+-.-.++...++.. +=.++.-+..-|+.+.
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~ 87 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQ-RVTMDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAVV 87 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEE-EEECSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCcEE-EEeCCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEE
Confidence 3444555556788888888877653 34444555544333444445543 3378777776676643
No 162
>2ysf_A E3 ubiquitin-protein ligase itchy homolog; AIP4, NAPP1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=60.61 E-value=15 Score=20.81 Aligned_cols=31 Identities=19% Similarity=0.246 Sum_probs=23.0
Q ss_pred CCCCCCCceEEEeeCCeEEEEeCCCCeeeEE
Q 033675 25 ASPESGDLALVATLNGTVHLVDTKRGESRWS 55 (114)
Q Consensus 25 ~~~~~~~taLVatlDGTiYLVd~~s~r~~WS 55 (114)
...+-..-.-..+-+|.+|+++..+++--|.
T Consensus 5 ~~~LP~gWe~~~~~~G~~Yy~nh~t~~ttw~ 35 (40)
T 2ysf_A 5 SSGLPEGWEMRFTVDGIPYFVDHNRRTTTYI 35 (40)
T ss_dssp CCCCCSSEEEEECTTCCEEEEETTTCCEESS
T ss_pred cCCCCcCcEEEEcCCCCEEEEECCCCcEecC
Confidence 3445555555566799999999999988873
No 163
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=60.61 E-value=26 Score=23.14 Aligned_cols=22 Identities=14% Similarity=0.383 Sum_probs=10.7
Q ss_pred eEEEeeCCeEEEEeCCCCeeeEE
Q 033675 33 ALVATLNGTVHLVDTKRGESRWS 55 (114)
Q Consensus 33 aLVatlDGTiYLVd~~s~r~~WS 55 (114)
.++-.-||.+.|.+ ..++++|+
T Consensus 64 ~l~l~~dGNLVl~d-~~~~~lW~ 85 (119)
T 1b2p_A 64 RAVLQPDGVLVVIT-NENVTVWQ 85 (119)
T ss_dssp EEEECTTSCEEEEC-TTCCEEEE
T ss_pred EEEEccCCEEEEEe-CCCcEEEc
Confidence 34444455555554 23455554
No 164
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=60.48 E-value=38 Score=23.24 Aligned_cols=64 Identities=8% Similarity=-0.076 Sum_probs=34.4
Q ss_pred eEEEeeCC--eEEEEeCCCCeeeEEeecCCCeeeeeecCCC-CceeeeCCcceEeeeeccccceeee
Q 033675 33 ALVATLNG--TVHLVDTKRGESRWSFSMGKPIYSSFTRNDP-DFYVDVGEDWKLYFHRKGIGKMKDI 96 (114)
Q Consensus 33 aLVatlDG--TiYLVd~~s~r~~WSFStGsPIYSSYqA~~~-~~fidcgdDW~LY~h~~~~GK~kl~ 96 (114)
++++..+| .||+++..++++.--.......+.....++. ...+=+..+=+||..+..-|+.+..
T Consensus 51 ~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 51 LFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp EEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred EEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 44444444 7999999988865433222222222332333 3322333334899988877776443
No 165
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=60.17 E-value=55 Score=25.32 Aligned_cols=63 Identities=11% Similarity=0.022 Sum_probs=38.6
Q ss_pred CCCceEEEee-CC-----eEEEEeCCCCeeeEEeec--CCC----------------------eeeeeecCCCCceeeeC
Q 033675 29 SGDLALVATL-NG-----TVHLVDTKRGESRWSFSM--GKP----------------------IYSSFTRNDPDFYVDVG 78 (114)
Q Consensus 29 ~~~taLVatl-DG-----TiYLVd~~s~r~~WSFSt--GsP----------------------IYSSYqA~~~~~fidcg 78 (114)
......+++. || +|++++..+|+..-.+.. +.| -..+++.++.+-++=++
T Consensus 47 dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~ 126 (741)
T 2ecf_A 47 DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFP 126 (741)
T ss_dssp TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEE
T ss_pred CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEE
Confidence 3444445555 88 999999999887655532 221 12445555555455444
Q ss_pred CcceEeeeecccc
Q 033675 79 EDWKLYFHRKGIG 91 (114)
Q Consensus 79 dDW~LY~h~~~~G 91 (114)
.+-++|.-+..-|
T Consensus 127 ~~~~i~~~d~~~~ 139 (741)
T 2ecf_A 127 LGGELYLYDLKQE 139 (741)
T ss_dssp ETTEEEEEESSSC
T ss_pred eCCcEEEEECCCC
Confidence 4578888877666
No 166
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=59.96 E-value=38 Score=23.13 Aligned_cols=61 Identities=13% Similarity=0.181 Sum_probs=35.6
Q ss_pred EEEeeCCeEEEEeCCCCeeeEEe-ecCCCeeeeeecCCCCceeeeCCc----ceEeeeecccccee
Q 033675 34 LVATLNGTVHLVDTKRGESRWSF-SMGKPIYSSFTRNDPDFYVDVGED----WKLYFHRKGIGKMK 94 (114)
Q Consensus 34 LVatlDGTiYLVd~~s~r~~WSF-StGsPIYSSYqA~~~~~fidcgdD----W~LY~h~~~~GK~k 94 (114)
++++.+|.|+.++.++++..--+ ..+..+++-...++...|+-..++ =.+|.-+..-|+.+
T Consensus 60 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~ 125 (333)
T 2dg1_A 60 LLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ 125 (333)
T ss_dssp EEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE
T ss_pred EEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEE
Confidence 34567888888888877765333 334445554433444456554444 46777666655543
No 167
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=59.77 E-value=23 Score=25.89 Aligned_cols=56 Identities=11% Similarity=0.049 Sum_probs=34.3
Q ss_pred CCeEEEEeCCCCeeeEEeec--CCCeeeeeecCCCCceeeeCCcceEeeeecccccee
Q 033675 39 NGTVHLVDTKRGESRWSFSM--GKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMK 94 (114)
Q Consensus 39 DGTiYLVd~~s~r~~WSFSt--GsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~k 94 (114)
+++|+++|..+|+..-.+.. .++|.+-...++++-+|-+|.|=.+++=+..-||.|
T Consensus 377 ~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 377 LRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQQEARTR 434 (435)
T ss_dssp CCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC-----
T ss_pred CCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCcCeee
Confidence 35789999999988887753 345655444455555555665657887777777764
No 168
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=59.26 E-value=36 Score=25.84 Aligned_cols=26 Identities=23% Similarity=0.175 Sum_probs=20.2
Q ss_pred CCCCCceEEEeeCCeEEEEeCCCCeee
Q 033675 27 PESGDLALVATLNGTVHLVDTKRGESR 53 (114)
Q Consensus 27 ~~~~~taLVatlDGTiYLVd~~s~r~~ 53 (114)
++.....++|+.||+|.++|.. ++..
T Consensus 201 spdg~~lasgs~dg~v~iwd~~-~~~~ 226 (434)
T 2oit_A 201 SPKGKQLAVGKQNGTVVQYLPT-LQEK 226 (434)
T ss_dssp CTTSSCEEEEETTSCEEEECTT-CCEE
T ss_pred cCCCCEEEEEcCCCcEEEEccC-Cccc
Confidence 3456778889999999999987 4433
No 169
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=59.15 E-value=55 Score=26.08 Aligned_cols=66 Identities=14% Similarity=0.141 Sum_probs=47.2
Q ss_pred CCCCCceEEEee--CCeEEEEeCCCCeeeEEeecCCCeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 27 PESGDLALVATL--NGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 27 ~~~~~taLVatl--DGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
++....++|+.. +++|.++|..++++.=.+..+.. ..-|......|+.-|+|.-.+|+-.+.-||+
T Consensus 145 spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 145 TPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp CTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-EEEEEEETTEEEEEETTSCEEEEECCSSSCC
T ss_pred cCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc-ceeecCCCceeEEECCCCCEEEEECCCCCeE
Confidence 456677889875 68999999999999999977653 2222222345678888887777766666775
No 170
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=57.39 E-value=44 Score=28.83 Aligned_cols=64 Identities=6% Similarity=0.037 Sum_probs=48.2
Q ss_pred CCCCCceEEEeeCCeEEEEeCCCCe-------eeEEeecCC-----CeeeeeecCCCCceeeeCCcceEeeeeccccc
Q 033675 27 PESGDLALVATLNGTVHLVDTKRGE-------SRWSFSMGK-----PIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGK 92 (114)
Q Consensus 27 ~~~~~taLVatlDGTiYLVd~~s~r-------~~WSFStGs-----PIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK 92 (114)
+|.+..-.+|+.||+|-+++..+++ ..-.|..+. .+++- ..+|++ ++-.+.|-.++.=+..-++
T Consensus 138 SPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sV-awSPdg-Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 138 NPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHI-VWYEDV-LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp CSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEE-EEETTE-EEEEETTCCEEEECCCSSS
T ss_pred cCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEE-EEcCCc-EEEEeCCCeEEEEECCCCc
Confidence 5788899999999999999999886 356765544 67765 344445 8888888888777765555
No 171
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=57.27 E-value=54 Score=27.51 Aligned_cols=67 Identities=16% Similarity=0.082 Sum_probs=42.2
Q ss_pred CCCCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecCCCCcee-eeC----------CcceEeeeeccccce
Q 033675 27 PESGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPDFYV-DVG----------EDWKLYFHRKGIGKM 93 (114)
Q Consensus 27 ~~~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~~~fi-dcg----------dDW~LY~h~~~~GK~ 93 (114)
++......+++-|++|+++|..+|+..-....+.....+.+.+|.+-++ =++ .+.++|.-+..-|+.
T Consensus 387 SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~ 464 (1045)
T 1k32_A 387 DRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI 464 (1045)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEE
T ss_pred CCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcE
Confidence 3455666778889999999999998877663333222344555443333 221 235888888776764
No 172
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=56.35 E-value=41 Score=22.35 Aligned_cols=61 Identities=8% Similarity=-0.021 Sum_probs=36.0
Q ss_pred CCCCceEEEe-eCCeEEEEeCCC-Cee------eEEeecCCCeeeeeecCCCC-ceeeeCCcceEeeeec
Q 033675 28 ESGDLALVAT-LNGTVHLVDTKR-GES------RWSFSMGKPIYSSFTRNDPD-FYVDVGEDWKLYFHRK 88 (114)
Q Consensus 28 ~~~~taLVat-lDGTiYLVd~~s-~r~------~WSFStGsPIYSSYqA~~~~-~fidcgdDW~LY~h~~ 88 (114)
+.....+|++ .||+|++++..+ ++. .+....|....+-.-.|+.. .|+-+..|=.++..+.
T Consensus 138 ~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~ 207 (343)
T 1ri6_A 138 PDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWEL 207 (343)
T ss_dssp TTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEES
T ss_pred CCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 3455667777 899999999887 765 45566665444321122333 4555545555555554
No 173
>2ysh_A GAS-7, growth-arrest-specific protein 7; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=56.20 E-value=16 Score=20.18 Aligned_cols=32 Identities=19% Similarity=0.194 Sum_probs=23.8
Q ss_pred CCCCCCceEEEeeCCeEEEEeCCCCeeeEEee
Q 033675 26 SPESGDLALVATLNGTVHLVDTKRGESRWSFS 57 (114)
Q Consensus 26 ~~~~~~taLVatlDGTiYLVd~~s~r~~WSFS 57 (114)
..+-+.-.-.-+-+|.+|.++..+++.-|.--
T Consensus 6 ~~LP~gW~~~~d~~Gr~YY~n~~T~~t~We~P 37 (40)
T 2ysh_A 6 SGLPPGWQSYLSPQGRRYYVNTTTNETTWERP 37 (40)
T ss_dssp SSCCTTCEEEECTTSCEEEECSSSCCEESSSC
T ss_pred CCCCCCceEEECCCCCEEEEECCCCCEeCCCC
Confidence 34445555556679999999999999988543
No 174
>2dmv_A Itchy homolog E3 ubiquitin protein ligase; WW domain, three stranded antiparallel beta sheet, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.06 E-value=18 Score=20.53 Aligned_cols=30 Identities=17% Similarity=0.181 Sum_probs=22.4
Q ss_pred CCCCCceEEEeeCCeEEEEeCCCCeeeEEe
Q 033675 27 PESGDLALVATLNGTVHLVDTKRGESRWSF 56 (114)
Q Consensus 27 ~~~~~taLVatlDGTiYLVd~~s~r~~WSF 56 (114)
++-+.-.-.-+-+|.+|.++..+++.-|.-
T Consensus 7 ~LP~GWe~~~d~~Gr~YY~n~~t~~T~We~ 36 (43)
T 2dmv_A 7 GLPPGWEQRVDQHGRVYYVDHVEKRTTWDR 36 (43)
T ss_dssp SCCTTEEEEECTTSCEEEEETTTCCEESSC
T ss_pred CCCCCceEEECCCCCEEEEECCCCCEecCC
Confidence 344445555556999999999999998854
No 175
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=55.43 E-value=39 Score=26.89 Aligned_cols=62 Identities=16% Similarity=0.022 Sum_probs=42.3
Q ss_pred CceEEEeeCCeEEEEeCCCC-eeeEEeec-CCCeeee-eecCCC--CceeeeCCcceEeeeeccccc
Q 033675 31 DLALVATLNGTVHLVDTKRG-ESRWSFSM-GKPIYSS-FTRNDP--DFYVDVGEDWKLYFHRKGIGK 92 (114)
Q Consensus 31 ~taLVatlDGTiYLVd~~s~-r~~WSFSt-GsPIYSS-YqA~~~--~~fidcgdDW~LY~h~~~~GK 92 (114)
...++|+.||||.++|..++ .+...+.. .++|.+- ..-+++ ..++-|+.|=.+-+-+.+-|+
T Consensus 278 ~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~ 344 (524)
T 2j04_B 278 TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIA 344 (524)
T ss_dssp SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHH
T ss_pred CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCC
Confidence 46778899999999999876 45554432 3567764 233443 467899999777666665554
No 176
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=54.97 E-value=72 Score=24.74 Aligned_cols=30 Identities=10% Similarity=0.101 Sum_probs=23.3
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEee
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFS 57 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFS 57 (114)
+.....+.|+.||+|.++|..+++..-.+.
T Consensus 249 pdg~~l~s~s~D~~v~lWd~~~~~~~~~~~ 278 (611)
T 1nr0_A 249 PDGTKIASASADKTIKIWNVATLKVEKTIP 278 (611)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCceeeeec
Confidence 345567778899999999999888765554
No 177
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=54.90 E-value=40 Score=27.22 Aligned_cols=62 Identities=11% Similarity=0.050 Sum_probs=37.9
Q ss_pred ceEE-EeeCCeEEEEeCCCCeeeEEeecCCC-eeeee--ecCCCCce-------------eeeCCcceEeeeeccccce
Q 033675 32 LALV-ATLNGTVHLVDTKRGESRWSFSMGKP-IYSSF--TRNDPDFY-------------VDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 32 taLV-atlDGTiYLVd~~s~r~~WSFStGsP-IYSSY--qA~~~~~f-------------idcgdDW~LY~h~~~~GK~ 93 (114)
..|+ ++.||||-++|..+|+.+-.|..+.. ..+-+ ..+|++-+ .-+.+|-.+-.++...||.
T Consensus 194 ~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~ 272 (356)
T 2w18_A 194 EALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLS 272 (356)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEE
T ss_pred ceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEE
Confidence 3444 58999999999999999999985543 12211 11222222 2356777777777777765
No 178
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=54.12 E-value=55 Score=23.09 Aligned_cols=65 Identities=11% Similarity=0.065 Sum_probs=39.2
Q ss_pred CCCCCceEEEeeCCeEEEEeCCCCeeeEE--eecC--CCeeeeeecCCCCceeeeCCcceEeeeecccc
Q 033675 27 PESGDLALVATLNGTVHLVDTKRGESRWS--FSMG--KPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIG 91 (114)
Q Consensus 27 ~~~~~taLVatlDGTiYLVd~~s~r~~WS--FStG--sPIYSSYqA~~~~~fidcgdDW~LY~h~~~~G 91 (114)
++.......|+.||+|.+++..+++..-. +..| .+|.+---.|+...++-++.|=.+..-+..-+
T Consensus 25 sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~ 93 (345)
T 3fm0_A 25 NPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQD 93 (345)
T ss_dssp CTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC
T ss_pred CCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCC
Confidence 34566777889999999999888764332 2232 34554322234456777777765555544433
No 179
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=53.57 E-value=20 Score=29.25 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=29.3
Q ss_pred CCCCCceEEEeeCCeEEEEeCC--CCeeeEEeecCC
Q 033675 27 PESGDLALVATLNGTVHLVDTK--RGESRWSFSMGK 60 (114)
Q Consensus 27 ~~~~~taLVatlDGTiYLVd~~--s~r~~WSFStGs 60 (114)
++...+++|++.||+|+.+|.. ++++..+...|.
T Consensus 205 SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~ 240 (567)
T 1qks_A 205 SASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS 240 (567)
T ss_dssp CTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC
Confidence 4567789999999999999996 889998888775
No 180
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=52.63 E-value=66 Score=23.63 Aligned_cols=64 Identities=14% Similarity=0.196 Sum_probs=43.8
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeec-CCCeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSM-GKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
+...+...|+-||+|.++|. ++++.=.|.. ..+|.+---.|+....+-+++|-.+.+-+. -|+.
T Consensus 26 pdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~-~~~~ 90 (577)
T 2ymu_A 26 PDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQL 90 (577)
T ss_dssp TTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCE
T ss_pred CCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCE
Confidence 34556677889999999995 6777777753 345655422235566788889988888774 3544
No 181
>2pfu_A Biopolymer transport EXBD protein; TONB system, proton motive force, periplasmic domain; NMR {Escherichia coli}
Probab=51.79 E-value=22 Score=21.95 Aligned_cols=29 Identities=10% Similarity=0.260 Sum_probs=18.9
Q ss_pred hcCCCCCCCCC-CCCCCceEEEeeCCeEEE
Q 033675 16 SSLPPTSPRAS-PESGDLALVATLNGTVHL 44 (114)
Q Consensus 16 ~s~p~~s~~~~-~~~~~taLVatlDGTiYL 44 (114)
+.+|..+..+. ..+....+.-+-||++|+
T Consensus 5 v~LP~a~~~~~~~~~~~i~i~I~~dg~i~~ 34 (99)
T 2pfu_A 5 VNLPASTSTPQPRPEKPVYLSVKADNSMFI 34 (99)
T ss_dssp CCCCCCCCCCCCCCCCCCEEEEETTTEEEE
T ss_pred CcCCCCCCCCCCCCCCCEEEEEeCCCCEEE
Confidence 35776655442 234557777788999887
No 182
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=50.41 E-value=73 Score=23.42 Aligned_cols=60 Identities=12% Similarity=0.059 Sum_probs=42.7
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecCCCCceeeeCCcceEeeee
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPDFYVDVGEDWKLYFHR 87 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~~~fidcgdDW~LY~h~ 87 (114)
+.....+.++.||++.+++..............++.+....++......++++-......
T Consensus 108 ~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (577)
T 2ymu_A 108 PDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 167 (577)
T ss_dssp TTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccceeccc
Confidence 455677788899999999988887777777777787776666665556666555544443
No 183
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=50.02 E-value=11 Score=28.08 Aligned_cols=20 Identities=15% Similarity=0.140 Sum_probs=12.3
Q ss_pred CCCceEEEeeCCeEEEEeCC
Q 033675 29 SGDLALVATLNGTVHLVDTK 48 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~ 48 (114)
.....+..+.||.||+.|..
T Consensus 31 ~~P~~ia~~pdG~l~V~e~~ 50 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIAERP 50 (352)
T ss_dssp SCEEEEEECTTSCEEEEETT
T ss_pred CCceEEEEcCCCeEEEEeCC
Confidence 44555666666776666655
No 184
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=49.19 E-value=89 Score=24.09 Aligned_cols=26 Identities=8% Similarity=-0.028 Sum_probs=18.6
Q ss_pred EEEeeCCeEEEEeCCC-----CeeeEEeecC
Q 033675 34 LVATLNGTVHLVDTKR-----GESRWSFSMG 59 (114)
Q Consensus 34 LVatlDGTiYLVd~~s-----~r~~WSFStG 59 (114)
|+.+.|++||+++..+ ++..--...+
T Consensus 135 la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~ 165 (706)
T 2z3z_A 135 VAYVRNHNLYIARGGKLGEGMSRAIAVTIDG 165 (706)
T ss_dssp EEEEETTEEEEEECBCTTSCCCCCEESCSCC
T ss_pred EEEEECCeEEEEecCcccccCCCcEEeccCC
Confidence 4446899999999988 7766544433
No 185
>3hbr_A OXA-48; class D beta-lactamase, antibiotic, dimer, hydrolase; HET: KCX; 1.90A {Klebsiella pneumoniae}
Probab=48.88 E-value=2.1 Score=32.71 Aligned_cols=52 Identities=17% Similarity=0.221 Sum_probs=16.1
Q ss_pred CchhhHHHHHHHHHhhcCCCCCCCCCCCCCCc-eEEE--eeCCeEEEEeCCCCeee
Q 033675 1 MRRSLIFLLLLTVILSSLPPTSPRASPESGDL-ALVA--TLNGTVHLVDTKRGESR 53 (114)
Q Consensus 1 mrr~li~ll~~~v~l~s~p~~s~~~~~~~~~t-aLVa--tlDGTiYLVd~~s~r~~ 53 (114)
||..|+-+||++-++...|..+.... +..+. .++. ..+|++-+.|..+|++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~-e~~~l~~~f~~~~~~G~~V~~d~~tG~il 55 (265)
T 3hbr_A 1 MRVLALSAVFLVASIIGMPAVAKEWQ-ENKSWNAHFTEHKSQGVVVLWNENKQQGF 55 (265)
T ss_dssp ------------------------CE-ECGGGHHHHHTTTCCEEEEEEETTTTEEE
T ss_pred CchHHHHHHHHHHHHhcCcccccchh-hHHHHHHHHHhcCCcEEEEEEECCCCCEE
Confidence 67777656666666666665553221 11111 2222 34689999999999985
No 186
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=48.49 E-value=51 Score=28.61 Aligned_cols=58 Identities=14% Similarity=0.080 Sum_probs=38.8
Q ss_pred CCeEEEEeCCCCeeeEEeecCCC-----eeeeeecC--CCCceeeeCCcceEeeeeccccce-eeecccCCC
Q 033675 39 NGTVHLVDTKRGESRWSFSMGKP-----IYSSFTRN--DPDFYVDVGEDWKLYFHRKGIGKM-KDIMKSTTP 102 (114)
Q Consensus 39 DGTiYLVd~~s~r~~WSFStGsP-----IYSSYqA~--~~~~fidcgdDW~LY~h~~~~GK~-kl~~~s~~~ 102 (114)
.+.||++|..+|..+|.|..+.. .-|+-.+- +.|+++| .+|+=| ..|.+ |.-+.+.+|
T Consensus 222 ~~~Lyv~d~~tG~li~~i~~~~~~~~~~Gls~~~~~D~d~Dg~~D-----~~YaGD-l~GnlWRfDl~~~~~ 287 (570)
T 3hx6_A 222 KAALLIIDMETGAITRKLEVTGRTGVPNGLSSPRLADNNSDGVAD-----YAYAGD-LQGNLWRFDLIAGKV 287 (570)
T ss_dssp CEEEEEEETTTCCEEEEEEECCSTTSCCCEEEEEEECTTSSSBCC-----EEEEEE-TTSEEEEEECSCSSC
T ss_pred ccEEEEEECCCCceEEEEecCCCCccCCccccceEEecCCCCcee-----EEEEEe-CCCcEEEEEcCCCCc
Confidence 45899999999999999987542 23333333 3456666 467655 35777 777766665
No 187
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=47.82 E-value=76 Score=25.38 Aligned_cols=67 Identities=7% Similarity=-0.074 Sum_probs=42.4
Q ss_pred CCCCCceEEEeeC---------CeEEEEeCCCCeeeEEeec-CCCeeeeeecCCCCceeeeCCcceEeeeeccccceee
Q 033675 27 PESGDLALVATLN---------GTVHLVDTKRGESRWSFSM-GKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMKD 95 (114)
Q Consensus 27 ~~~~~taLVatlD---------GTiYLVd~~s~r~~WSFSt-GsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~kl 95 (114)
|+.....++++-| |.+|++|..+|+..- ... ...+. +-.-+|.+-.|-+..|-.||..+..-|+.+.
T Consensus 70 Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~-l~~~~~~~~-~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~ 146 (740)
T 4a5s_A 70 SPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT-EERIPNNTQ-WVTWSPVGHKLAYVWNNDIYVKIEPNLPSYR 146 (740)
T ss_dssp CTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC-SSCCCTTEE-EEEECSSTTCEEEEETTEEEEESSTTSCCEE
T ss_pred CCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE-cccCCCcce-eeEECCCCCEEEEEECCeEEEEECCCCceEE
Confidence 4445555666665 777899999998653 333 22232 2244455556666677899998887777543
No 188
>2law_A Yorkie homolog; YAP, SMAD1, CDK, signal transduction, signaling protein-TRAN complex; NMR {Homo sapiens}
Probab=47.71 E-value=28 Score=19.29 Aligned_cols=21 Identities=19% Similarity=0.487 Sum_probs=17.3
Q ss_pred EEeeCCeEEEEeCCCCeeeEE
Q 033675 35 VATLNGTVHLVDTKRGESRWS 55 (114)
Q Consensus 35 VatlDGTiYLVd~~s~r~~WS 55 (114)
..+-+|.+|+++..+++--|.
T Consensus 14 ~~~~~G~~Yy~nh~t~~ttW~ 34 (38)
T 2law_A 14 AMTQDGEIYYINHKNKTTSWL 34 (38)
T ss_dssp EEETTTEEEEEETTTTEEESS
T ss_pred EECCCCCEEEEECCCCCEeCC
Confidence 344799999999999988873
No 189
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=46.69 E-value=43 Score=21.60 Aligned_cols=33 Identities=15% Similarity=0.124 Sum_probs=18.1
Q ss_pred CCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeee
Q 033675 30 GDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYS 64 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYS 64 (114)
....|+---||.+-+.+. +++.|+=.+..|..+
T Consensus 19 g~y~l~~q~DgNLvly~~--~~~vW~ant~~~~~~ 51 (105)
T 4h3o_A 19 EPYHFIMQDDCNLVLYDH--STSTWASNTEIGGKS 51 (105)
T ss_dssp TTEEEEECTTSCEEEEET--TEEEEECCCCCTTCC
T ss_pred CCEEEEECCCCeEEEEEC--CEEEEEecCCCCCCc
Confidence 345555556666655542 456666555555443
No 190
>1ymz_A CC45; artificial protein, computational design, unknown function; NMR {Synthetic} SCOP: k.22.1.1
Probab=46.40 E-value=27 Score=19.65 Aligned_cols=27 Identities=11% Similarity=0.263 Sum_probs=20.7
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEE
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWS 55 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WS 55 (114)
-++-.-.-+-+|.+|.++..+++.-|.
T Consensus 10 P~gW~~~~~~~Gr~YY~n~~T~~t~We 36 (43)
T 1ymz_A 10 PPGWERRTDVEGKVYYFNVRTLTTTWE 36 (43)
T ss_dssp CSSEEEEECTTSCEEEEETTTTEEESS
T ss_pred CCCCEEEECCCCCEEEEECCCCCCccc
Confidence 334455556699999999999998884
No 191
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=44.73 E-value=76 Score=24.02 Aligned_cols=65 Identities=17% Similarity=0.149 Sum_probs=38.1
Q ss_pred CCCceEEEeeC----CeEEEEeCCCCeeeEEeecCCCeeeeeecCCC-CceeeeCCc--ceEeeeecccccee
Q 033675 29 SGDLALVATLN----GTVHLVDTKRGESRWSFSMGKPIYSSFTRNDP-DFYVDVGED--WKLYFHRKGIGKMK 94 (114)
Q Consensus 29 ~~~taLVatlD----GTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~-~~fidcgdD--W~LY~h~~~~GK~k 94 (114)
.......++.| ++||++|..+|+.. .+..+.-.-.+..-+|. ......++| ++||..+..-|+.+
T Consensus 160 DG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 160 RGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp ETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred CCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 34444445666 78999998888876 33332222233344433 333333333 58999988877766
No 192
>2ysg_A Syntaxin-binding protein 4; synip, STXBP4, WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=44.58 E-value=40 Score=18.82 Aligned_cols=28 Identities=11% Similarity=0.138 Sum_probs=20.6
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEE
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWS 55 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WS 55 (114)
+-..-.---+-+|.+|+++..+++--|.
T Consensus 8 LP~gWe~~~~~~Gr~Yy~nh~t~~ttW~ 35 (40)
T 2ysg_A 8 LPYGWEEAYTADGIKYFINHVTQTTSWI 35 (40)
T ss_dssp CCTTEEEEECSSSCEEEEESSSCCEECC
T ss_pred CCCCcEEEEcCCCCEEEEECCCCcCcCC
Confidence 3344444456799999999999988884
No 193
>1wr3_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus}
Probab=44.23 E-value=34 Score=18.41 Aligned_cols=24 Identities=13% Similarity=0.220 Sum_probs=18.5
Q ss_pred ceEEEeeCCeEEEEeCCCCeeeEE
Q 033675 32 LALVATLNGTVHLVDTKRGESRWS 55 (114)
Q Consensus 32 taLVatlDGTiYLVd~~s~r~~WS 55 (114)
-.-.-+-+|.+|.++..+++.-|.
T Consensus 9 We~~~d~~G~~Yy~n~~t~~t~We 32 (36)
T 1wr3_A 9 WEEKVDNLGRTYYVNHNNRSTQWH 32 (36)
T ss_dssp EEEEECSSSCEEEEETTTCCEESS
T ss_pred CEEEECCCCCEEEEECCCCCEeee
Confidence 333445689999999999998873
No 194
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=44.13 E-value=51 Score=24.11 Aligned_cols=32 Identities=16% Similarity=0.095 Sum_probs=26.0
Q ss_pred CCCceEEEe------eCCeEEEEeCCCCeeeEEeecCC
Q 033675 29 SGDLALVAT------LNGTVHLVDTKRGESRWSFSMGK 60 (114)
Q Consensus 29 ~~~taLVat------lDGTiYLVd~~s~r~~WSFStGs 60 (114)
.+..++|+. .||+||++|..++++.=.+..|.
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~ 51 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAF 51 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCE
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCC
Confidence 446788876 38899999999999988887774
No 195
>1w7f_A Beta-lactamase; hydrolase, isocitrate, bacillus licheniformis hydrolase; HET: ICT; 1.80A {Bacillus licheniformis}
Probab=43.64 E-value=12 Score=27.39 Aligned_cols=23 Identities=9% Similarity=0.111 Sum_probs=18.1
Q ss_pred CeEEEEeCCCCeeeEEeecCCCee
Q 033675 40 GTVHLVDTKRGESRWSFSMGKPIY 63 (114)
Q Consensus 40 GTiYLVd~~s~r~~WSFStGsPIY 63 (114)
+.++++|.++|+++ ++....+.+
T Consensus 61 ~~v~v~d~~tg~~l-~~n~~~~~~ 83 (307)
T 1w7f_A 61 LGIFALDTGTNRTV-TYRPDERFA 83 (307)
T ss_dssp EEEEEEETTTCCEE-EESTTSCEE
T ss_pred EEEEEEECCCCCEE-EECCCCccc
Confidence 34678899999986 888777766
No 196
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=43.36 E-value=43 Score=24.28 Aligned_cols=61 Identities=5% Similarity=-0.059 Sum_probs=40.9
Q ss_pred ceEEEeeCCeEEEEeCCCCeee-EEeecCCCeeeeeecCCC--CceeeeCCcceEeeeeccccce
Q 033675 32 LALVATLNGTVHLVDTKRGESR-WSFSMGKPIYSSFTRNDP--DFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 32 taLVatlDGTiYLVd~~s~r~~-WSFStGsPIYSSYqA~~~--~~fidcgdDW~LY~h~~~~GK~ 93 (114)
+..-|+.|+||-+||..++++. -.+.-.+|+.+- +..|. ..++-+++|=.+.+-+..-|+.
T Consensus 158 ~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v-~~~p~~~~~l~~~~~d~~v~~wd~~t~~~ 221 (393)
T 4gq1_A 158 VIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISV-QFRPSNPNQLIVGERNGNIRIFDWTLNLS 221 (393)
T ss_dssp EEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEE-EEETTEEEEEEEEETTSEEEEEETTCCC-
T ss_pred EEEEEECCCeEEEEECCCCceeeeecCCCCCcEEE-EECCCCCceEEecCCCCEEEEEECCCCcc
Confidence 3444678999999998766554 445556677653 44443 3577888888888877776665
No 197
>1wr7_A NEDD4-2; all-beta, ligase; NMR {Mus musculus}
Probab=41.68 E-value=46 Score=18.62 Aligned_cols=27 Identities=15% Similarity=0.364 Sum_probs=20.3
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEE
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWS 55 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WS 55 (114)
-..-.-..+-+|.+|+++..+++.-|.
T Consensus 10 P~gWe~~~~~~G~~Yy~n~~t~~t~We 36 (41)
T 1wr7_A 10 PPGWEMRIAPNGRPFFIDHNTKTTTWE 36 (41)
T ss_dssp CTTEEEEECTTSCEEEEETTTTEEESS
T ss_pred CCCcEEEEcCCCCEEEEECCCCCeecC
Confidence 344444455799999999999998883
No 198
>2kyk_A E3 ubiquitin-protein ligase itchy homolog; LMP2A, PY motif, WW domain; NMR {Homo sapiens}
Probab=40.47 E-value=39 Score=18.60 Aligned_cols=25 Identities=16% Similarity=0.219 Sum_probs=19.2
Q ss_pred CceEEEeeCCeEEEEeCCCCeeeEE
Q 033675 31 DLALVATLNGTVHLVDTKRGESRWS 55 (114)
Q Consensus 31 ~taLVatlDGTiYLVd~~s~r~~WS 55 (114)
.-.-.-+-+|.+|+++..+++.-|.
T Consensus 10 gWe~~~d~~G~~YY~n~~t~~t~We 34 (39)
T 2kyk_A 10 GWERRVDNMGRIYYVDHFTRTTTWQ 34 (39)
T ss_dssp SCEEEECTTSCEEEECSSSCCEECC
T ss_pred CcEEEEcCCCCEEEEECCCCCEecc
Confidence 3444445699999999999998884
No 199
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=40.45 E-value=65 Score=25.75 Aligned_cols=74 Identities=7% Similarity=-0.140 Sum_probs=46.1
Q ss_pred cCCCCCCCCC--CCCCCceEEEeeC-----CeEEEEeCCCCeeeEEeecCCCeeeeeecCCC--Cceeee----------
Q 033675 17 SLPPTSPRAS--PESGDLALVATLN-----GTVHLVDTKRGESRWSFSMGKPIYSSFTRNDP--DFYVDV---------- 77 (114)
Q Consensus 17 s~p~~s~~~~--~~~~~taLVatlD-----GTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~--~~fidc---------- 77 (114)
.+|+|.+-.. ++.+..++|+... |+|+.+|..++++.+.+..|.-- ....++. ..|+-.
T Consensus 69 ~~~~~~~~~~~p~~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~ 146 (426)
T 3c75_H 69 GEADEPVILEAPAPDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGK 146 (426)
T ss_dssp SCCCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEE
T ss_pred cCCccccccccCCCCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCC
Confidence 4555443222 2355678888874 79999999999999999998643 2333322 335544
Q ss_pred CCcceEeeeeccccce
Q 033675 78 GEDWKLYFHRKGIGKM 93 (114)
Q Consensus 78 gdDW~LY~h~~~~GK~ 93 (114)
++| .+..-|..-+|.
T Consensus 147 ~~~-~VsviD~~t~~v 161 (426)
T 3c75_H 147 RTD-YVEVFDPVTFLP 161 (426)
T ss_dssp EEE-EEEEECTTTCCE
T ss_pred CCC-EEEEEECCCCcE
Confidence 123 455556666665
No 200
>2kpz_A E3 ubiquitin-protein ligase NEDD4; WW domain, HTLV1, NEDD4, human modular domain, complex, HOST interaction, ligase; NMR {Homo sapiens} PDB: 2kq0_A 2laj_A*
Probab=40.25 E-value=33 Score=20.06 Aligned_cols=28 Identities=14% Similarity=0.312 Sum_probs=21.1
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEE
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWS 55 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WS 55 (114)
+-+.-.-.-+-+|.+|+++..+++.-|.
T Consensus 13 LP~gWe~~~~~~G~~Yy~nh~T~~ttWe 40 (49)
T 2kpz_A 13 LPKGWEVRHAPNGRPFFIDHNTKTTTWE 40 (49)
T ss_dssp CCTTEEEEECTTSCEEEEETTTTEEESS
T ss_pred CCCCcEEEECCCCCEEEEECCCCCEecC
Confidence 3344444455799999999999998884
No 201
>1e0m_A Wwprototype; SH3 prototype, protein design, de novo protein; NMR {} SCOP: k.22.1.1
Probab=39.76 E-value=43 Score=17.88 Aligned_cols=26 Identities=19% Similarity=0.221 Sum_probs=20.0
Q ss_pred CceEEEeeCCeEEEEeCCCCeeeEEe
Q 033675 31 DLALVATLNGTVHLVDTKRGESRWSF 56 (114)
Q Consensus 31 ~taLVatlDGTiYLVd~~s~r~~WSF 56 (114)
.-.-.-+-+|.+|.++..+++.-|..
T Consensus 7 gW~~~~~~~G~~Yy~n~~t~~t~W~~ 32 (37)
T 1e0m_A 7 GWDEYKTHNGKTYYYNHNTKTSTWTD 32 (37)
T ss_dssp TEEEEECSSCCEEEEETTTTEEESSC
T ss_pred CcEEEECCCCCEEEEECCCCCeeeeC
Confidence 33344457999999999999998853
No 202
>2zaj_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; BAI1-associated protein 1 (BAP-1); NMR {Homo sapiens}
Probab=39.72 E-value=59 Score=19.33 Aligned_cols=31 Identities=6% Similarity=-0.023 Sum_probs=23.6
Q ss_pred CCCCCCceEEEeeCCeEEEEeCCCCeeeEEe
Q 033675 26 SPESGDLALVATLNGTVHLVDTKRGESRWSF 56 (114)
Q Consensus 26 ~~~~~~taLVatlDGTiYLVd~~s~r~~WSF 56 (114)
.++-+.-.-..+.+|.+|+|+..+++--|.-
T Consensus 12 ~~LP~GWe~~~d~~Gr~YYvnh~t~~T~We~ 42 (49)
T 2zaj_A 12 LELPAGWEKIEDPVYGIYYVDHINRKTQYEN 42 (49)
T ss_dssp SCCCTTEEEEEETTTEEEEEETTTTEEESSC
T ss_pred CCCCcCceEEEcCCCCEEEEeCCCCCEecCC
Confidence 3445555556668999999999999988853
No 203
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=39.18 E-value=1.3e+02 Score=23.10 Aligned_cols=55 Identities=9% Similarity=-0.049 Sum_probs=31.9
Q ss_pred CeEEEEeCCCCeeeEEeecCCCe---eeeeecCCCCceeeeCCcceEeeeeccccceee
Q 033675 40 GTVHLVDTKRGESRWSFSMGKPI---YSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMKD 95 (114)
Q Consensus 40 GTiYLVd~~s~r~~WSFStGsPI---YSSYqA~~~~~fidcgdDW~LY~h~~~~GK~kl 95 (114)
++||++|..+++. -.+..+... -.+.+.+|.+-+|-...+-++|.-+..-|+.+.
T Consensus 91 ~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~ 148 (723)
T 1xfd_A 91 GYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIR 148 (723)
T ss_dssp SEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEE
T ss_pred eeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEE
Confidence 7888998888876 444433211 122233444434444444688888877776643
No 204
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=39.16 E-value=1.3e+02 Score=23.32 Aligned_cols=61 Identities=16% Similarity=0.078 Sum_probs=36.2
Q ss_pred EEEeeCCeEEEEeCCCC---eeeEEeecCCCeeeeeecCCCCceeeeCCcceEeeeeccccceee
Q 033675 34 LVATLNGTVHLVDTKRG---ESRWSFSMGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMKD 95 (114)
Q Consensus 34 LVatlDGTiYLVd~~s~---r~~WSFStGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~kl 95 (114)
|+.+-+|+|++++..++ ++.--...+.++.+ .+.+|.+-+|-+..|-++|.-+..-|+.+.
T Consensus 123 l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~~~~~-~~~SPDG~~la~~~~~~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 123 LLFPLGGELYLYDLKQEGKAAVRQLTHGEGFATD-AKLSPKGGFVSFIRGRNLWVIDLASGRQMQ 186 (741)
T ss_dssp EEEEETTEEEEEESSSCSTTSCCBCCCSSSCEEE-EEECTTSSEEEEEETTEEEEEETTTTEEEE
T ss_pred EEEEeCCcEEEEECCCCCcceEEEcccCCccccc-ccCCCCCCEEEEEeCCcEEEEecCCCCEEE
Confidence 33344599999999888 54322222344433 344555445555445589988877776643
No 205
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=39.02 E-value=1.1e+02 Score=24.65 Aligned_cols=52 Identities=13% Similarity=0.128 Sum_probs=33.8
Q ss_pred EEEeeCCeEEEEeCCCCeeeEEeecCC-CeeeeeecCCCC-ceeeeCCcceEee
Q 033675 34 LVATLNGTVHLVDTKRGESRWSFSMGK-PIYSSFTRNDPD-FYVDVGEDWKLYF 85 (114)
Q Consensus 34 LVatlDGTiYLVd~~s~r~~WSFStGs-PIYSSYqA~~~~-~fidcgdDW~LY~ 85 (114)
.-++.||||.++|..+|+..=++.... +..++...+|++ ..+-+.+|=.+++
T Consensus 299 ASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIkl 352 (356)
T 2w18_A 299 AAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFV 352 (356)
T ss_dssp EEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEE
T ss_pred EEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEE
Confidence 345589999999999999888886332 244444455543 4556777644443
No 206
>3hun_A Penicillin-binding protein 4; ampicillin, beta-lactamase, serine type D-Ala, D-Ala-carboxypeptidase, antibiotics; HET: ZZ7; 2.00A {Staphylococcus aureus} PDB: 3hum_A*
Probab=38.90 E-value=7.3 Score=32.75 Aligned_cols=22 Identities=9% Similarity=0.229 Sum_probs=19.2
Q ss_pred eEEEEeCCCCeeeEEeecCCCee
Q 033675 41 TVHLVDTKRGESRWSFSMGKPIY 63 (114)
Q Consensus 41 TiYLVd~~s~r~~WSFStGsPIY 63 (114)
..+++| ++|+++++-+...+.+
T Consensus 73 sail~D-~TG~vL~~kNad~~~~ 94 (453)
T 3hun_A 73 SAVNVS-QTGQLLYQYNIDTKWN 94 (453)
T ss_dssp EEEEEE-TTSBEEEEESTTCCBC
T ss_pred EEEEEE-CCCCEEEEECCCCccc
Confidence 456789 9999999999999887
No 207
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=38.47 E-value=1.1e+02 Score=22.10 Aligned_cols=45 Identities=18% Similarity=0.259 Sum_probs=28.5
Q ss_pred EEeeCCeEEEEeCCCCeeeEE-eecCCCeeeeeecCCCC-ceeeeCCc
Q 033675 35 VATLNGTVHLVDTKRGESRWS-FSMGKPIYSSFTRNDPD-FYVDVGED 80 (114)
Q Consensus 35 VatlDGTiYLVd~~s~r~~WS-FStGsPIYSSYqA~~~~-~fidcgdD 80 (114)
-++-||+|+++|..+++..-. ..-+.||.+- .-++.+ ...-+.+|
T Consensus 334 sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~sv-afspdG~~LA~as~~ 380 (393)
T 4gq1_A 334 AHSQHGLIQLINTYEKDSNSIPIQLGMPIVDF-CWHQDGSHLAIATEG 380 (393)
T ss_dssp EETTTTEEEEEETTCTTCCEEEEECSSCEEEE-EECTTSSEEEEEESS
T ss_pred EECCCCEEEEEECCCCcEEEEecCCCCcEEEE-EEcCCCCEEEEEeCC
Confidence 356799999999998877655 4455677754 444443 33334444
No 208
>2yse_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI-1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.31 E-value=67 Score=20.04 Aligned_cols=30 Identities=7% Similarity=0.010 Sum_probs=23.7
Q ss_pred CCCCCCceEEEeeCCeEEEEeCCCCeeeEE
Q 033675 26 SPESGDLALVATLNGTVHLVDTKRGESRWS 55 (114)
Q Consensus 26 ~~~~~~taLVatlDGTiYLVd~~s~r~~WS 55 (114)
..+-+.-.-..+-+|.+|+|+..+++--|.
T Consensus 12 ~~LP~GWE~~~d~~Gr~YYvnh~tk~T~We 41 (60)
T 2yse_A 12 LELPAGWEKIEDPVYGIYYVDHINRKTQYE 41 (60)
T ss_dssp SSCCSSEEEEECSSSCEEEEETTTTEEESS
T ss_pred CCCCCCcEEEECCCCCEEEEeCCCCCeecc
Confidence 445566666777899999999999998884
No 209
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=37.03 E-value=1.3e+02 Score=22.30 Aligned_cols=66 Identities=9% Similarity=0.028 Sum_probs=36.2
Q ss_pred CCceEEEee-CC--eEEEEeCCCCeeeEEeecCCCeeeeeecCCCCcee--eeCC--cceEeeeeccccceeee
Q 033675 30 GDLALVATL-NG--TVHLVDTKRGESRWSFSMGKPIYSSFTRNDPDFYV--DVGE--DWKLYFHRKGIGKMKDI 96 (114)
Q Consensus 30 ~~taLVatl-DG--TiYLVd~~s~r~~WSFStGsPIYSSYqA~~~~~fi--dcgd--DW~LY~h~~~~GK~kl~ 96 (114)
....++++- || +||+++..++++.--...+..+.+ ...++.+-+| -..+ +.++|.-+..-|+.+..
T Consensus 278 g~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~-~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l 350 (415)
T 2hqs_A 278 SQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQD-ADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVL 350 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEE-EEECTTSSEEEEEEECSSCEEEEEEETTTCCEEEC
T ss_pred CCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccC-eEECCCCCEEEEEECcCCceEEEEEECCCCCEEEe
Confidence 333344443 45 799999888876432223333332 3444443322 2222 47899988887877543
No 210
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=36.92 E-value=56 Score=21.09 Aligned_cols=27 Identities=22% Similarity=0.352 Sum_probs=19.0
Q ss_pred CceEEEeeCCeEEEEeCCCCeeeEEeec
Q 033675 31 DLALVATLNGTVHLVDTKRGESRWSFSM 58 (114)
Q Consensus 31 ~taLVatlDGTiYLVd~~s~r~~WSFSt 58 (114)
...|+-.-||.+++.+. .++++|+-.+
T Consensus 50 ~~~l~l~~dGnLvl~d~-~~~~vWss~t 76 (109)
T 3r0e_A 50 DCKLTLTDYGELVIKNG-DGSTVWKSGA 76 (109)
T ss_dssp SCEEEECTTSCEEEECT-TSCEEEECCC
T ss_pred cEEEEEcCCCeEEEEeC-CCCEEEcCCC
Confidence 45666677888888875 4678886443
No 211
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=36.74 E-value=79 Score=24.52 Aligned_cols=62 Identities=15% Similarity=0.110 Sum_probs=37.9
Q ss_pred ceEEEeeCCeEEEEeCCCCeeeEEeecCCC---eeeeeecCCCCceeeeCC----------cceEeeeeccccce
Q 033675 32 LALVATLNGTVHLVDTKRGESRWSFSMGKP---IYSSFTRNDPDFYVDVGE----------DWKLYFHRKGIGKM 93 (114)
Q Consensus 32 taLVatlDGTiYLVd~~s~r~~WSFStGsP---IYSSYqA~~~~~fidcgd----------DW~LY~h~~~~GK~ 93 (114)
..++++-||+|++++..+|+..=-+....- --.+++.+|.+-+|=++. |=.+|.-+..-|+.
T Consensus 28 ~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~ 102 (719)
T 1z68_A 28 EYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF 102 (719)
T ss_dssp EEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE
T ss_pred eEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcc
Confidence 344455799999999999887644432211 023556665544443322 46788888777765
No 212
>2yf1_A Major histocompatibility complex class I glycoPro haplotype B21; immune system, BF21, immune response, immunoglobulin domain; 2.75A {Gallus gallus} PDB: 2yez_A 2yf5_A 2yf6_A
Probab=36.41 E-value=56 Score=25.20 Aligned_cols=30 Identities=10% Similarity=0.171 Sum_probs=23.2
Q ss_pred CCCCCCCCCceEEEeeCCeEEEE-eCCCCee
Q 033675 23 PRASPESGDLALVATLNGTVHLV-DTKRGES 52 (114)
Q Consensus 23 ~~~~~~~~~taLVatlDGTiYLV-d~~s~r~ 52 (114)
+++.+..+....||-+|++.+.- |.+++|.
T Consensus 34 S~p~~g~P~f~~vG~VDd~qf~~yDS~~~r~ 64 (329)
T 2yf1_A 34 TDPGPGLPWFVDVGYVDGELFMHYNSTARRA 64 (329)
T ss_dssp SCCCTTSCSEEEEEEETTEEEEEEETTTCSC
T ss_pred CCCCCCCCceEEEEEcCCEEEEEEECCCCcE
Confidence 45666688899999999998866 7666653
No 213
>1tk7_A CG4244-PB; WW domain, notch, signaling protein; NMR {Drosophila melanogaster} SCOP: b.72.1.1 b.72.1.1
Probab=35.93 E-value=84 Score=19.99 Aligned_cols=32 Identities=13% Similarity=0.150 Sum_probs=23.8
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeecC
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSMG 59 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFStG 59 (114)
+.++-.-..+-+|.+|+++..+++--|.--..
T Consensus 13 LP~gWe~~~~~~Gr~Yy~n~~t~~t~W~~P~~ 44 (88)
T 1tk7_A 13 LPDGWEKKIQSDNRVYFVNHKNRTTQWEDPRT 44 (88)
T ss_dssp SSSSCCEEEETTTEEEEEETTTTEEEEESCCC
T ss_pred CCCCcEEEECCCCCEEEEECCCCCeEeecccc
Confidence 33444444557999999999999999986543
No 214
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=35.31 E-value=58 Score=25.02 Aligned_cols=59 Identities=14% Similarity=0.017 Sum_probs=37.1
Q ss_pred EEeeCCeEEEEeCCCCeeeEEeecCCC---eeeeeecCCCCceeeeC-C---------cceEeeeeccccce
Q 033675 35 VATLNGTVHLVDTKRGESRWSFSMGKP---IYSSFTRNDPDFYVDVG-E---------DWKLYFHRKGIGKM 93 (114)
Q Consensus 35 VatlDGTiYLVd~~s~r~~WSFStGsP---IYSSYqA~~~~~fidcg-d---------DW~LY~h~~~~GK~ 93 (114)
+.+.||+|++++..+|+..-.+....- --.+++.+|.+-+|=++ + +-.+|.-+..-|+.
T Consensus 32 ~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 103 (723)
T 1xfd_A 32 YREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP 103 (723)
T ss_dssp CCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC
T ss_pred EEeCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce
Confidence 447899999999999988766654331 02455666554443332 2 25677777766665
No 215
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=35.03 E-value=64 Score=20.59 Aligned_cols=30 Identities=17% Similarity=0.357 Sum_probs=19.7
Q ss_pred CCceEEEeeCCeEEEEeCCCCeeeEEeecCCC
Q 033675 30 GDLALVATLNGTVHLVDTKRGESRWSFSMGKP 61 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r~~WSFStGsP 61 (114)
...+|.-.-||.++|.+. ++++|+-.+..+
T Consensus 19 g~~~L~~q~dGnLvly~~--~~~vW~snt~~~ 48 (109)
T 3dzw_A 19 GRYVFIMQEDCNLVLYDV--DKPIWATNTGGL 48 (109)
T ss_dssp TTEEEEECTTSCEEEEET--TEEEEECCCTTS
T ss_pred CCEEEEEcCCCcEEEEeC--CEEEEECCcccC
Confidence 455666667777777665 577777666544
No 216
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=34.87 E-value=1.7e+02 Score=23.22 Aligned_cols=75 Identities=24% Similarity=0.237 Sum_probs=56.0
Q ss_pred CCCceEEEee----------CCeEEEEeCCCCeeeEEeecCCCeeeeeecCCC--CceeeeCCcceEeeeeccccce-ee
Q 033675 29 SGDLALVATL----------NGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDP--DFYVDVGEDWKLYFHRKGIGKM-KD 95 (114)
Q Consensus 29 ~~~taLVatl----------DGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~--~~fidcgdDW~LY~h~~~~GK~-kl 95 (114)
..+..+|+.- ..+|+.+|..++|+.=++..|.++++-.--+|. -.|+-++.+=.++.+|..-||. +-
T Consensus 290 ~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~ 369 (386)
T 3sjl_D 290 ALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRS 369 (386)
T ss_dssp TTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred CCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEE
Confidence 5567777764 258999999999999999999988875333343 3688888888999999999998 43
Q ss_pred ecccCCCc
Q 033675 96 IMKSTTPN 103 (114)
Q Consensus 96 ~~~s~~~~ 103 (114)
+..-..||
T Consensus 370 i~~~~~p~ 377 (386)
T 3sjl_D 370 VNQLGHGP 377 (386)
T ss_dssp ECCCCSSC
T ss_pred ecCCCCCc
Confidence 43344454
No 217
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=34.47 E-value=51 Score=21.20 Aligned_cols=29 Identities=21% Similarity=0.350 Sum_probs=16.7
Q ss_pred CceEEEeeCCeEEEEeCCCCeeeEEeecCCC
Q 033675 31 DLALVATLNGTVHLVDTKRGESRWSFSMGKP 61 (114)
Q Consensus 31 ~taLVatlDGTiYLVd~~s~r~~WSFStGsP 61 (114)
..+|.-.-||.+.+.+ .+++.|+=.+..|
T Consensus 21 ~~~l~~~~dGnlvl~~--~~~~vW~sn~~~~ 49 (110)
T 3a0c_A 21 SYRLIMQGDCNFVLYD--SGKPVWASNTGGL 49 (110)
T ss_dssp TEEEEECTTSCEEEEE--TTEEEEECCCTTS
T ss_pred CEEEEEcCCCcEEEEE--CCEEEEECCCCCC
Confidence 3445555566666665 3566666655444
No 218
>2ysd_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=34.20 E-value=81 Score=19.27 Aligned_cols=28 Identities=21% Similarity=0.388 Sum_probs=21.2
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEE
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWS 55 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WS 55 (114)
+-..-.--.+.+|.+|+++..+++--|.
T Consensus 15 LP~GWe~~~~~~Gr~Yyinh~tk~TtWe 42 (57)
T 2ysd_A 15 LPENWEMAYTENGEVYFIDHNTKTTSWL 42 (57)
T ss_dssp CCSSEEEEECSSCCEEEEETTTTEEESS
T ss_pred CCcCcEEEECCCCCEEEEECCCCcEecC
Confidence 3444444455799999999999998884
No 219
>2ysb_A Salvador homolog 1 protein; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: k.22.1.1
Probab=32.86 E-value=78 Score=18.68 Aligned_cols=29 Identities=17% Similarity=0.308 Sum_probs=21.9
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEe
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSF 56 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSF 56 (114)
+-+.-.--.+.+|.+|+++..+++--|.-
T Consensus 12 LP~gWe~~~~~~Gr~Yy~nh~t~~T~W~~ 40 (49)
T 2ysb_A 12 LPPGWSVDWTMRGRKYYIDHNTNTTHWSH 40 (49)
T ss_dssp CCTTEEEEECSSSCEEEEETTTTEEESSC
T ss_pred CCCCceEEECCCCCEEEEEcCCCCEEecC
Confidence 34444445567999999999999998853
No 220
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=32.49 E-value=61 Score=20.81 Aligned_cols=22 Identities=23% Similarity=0.419 Sum_probs=15.8
Q ss_pred eEEEeeCCeEEEEeCCCCeeeEE
Q 033675 33 ALVATLNGTVHLVDTKRGESRWS 55 (114)
Q Consensus 33 aLVatlDGTiYLVd~~s~r~~WS 55 (114)
.++-.-||.+.|.+. .++++|+
T Consensus 54 ~l~l~~dGNLVl~~~-~~~~~W~ 75 (110)
T 3a0c_A 54 RLTLHNNGNLVIYDQ-SNRVIWQ 75 (110)
T ss_dssp EEEECTTSCEEEECT-TCCEEEE
T ss_pred EEEEeCCCCEEEECC-CCcEEEe
Confidence 455566888888875 5678886
No 221
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=32.43 E-value=2e+02 Score=23.35 Aligned_cols=57 Identities=18% Similarity=0.101 Sum_probs=39.0
Q ss_pred ceEEEe-eCCeEEEEeCCCCeeeEEeecCCCeeeeeecCCCC-ceeeeCCcceEeeeecc
Q 033675 32 LALVAT-LNGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPD-FYVDVGEDWKLYFHRKG 89 (114)
Q Consensus 32 taLVat-lDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~~-~fidcgdDW~LY~h~~~ 89 (114)
..+|+. -||+|+++|..++++...+..|.-.+..--.+|.. .|+-..|+ .++.-|..
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg-~V~viD~~ 226 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDG-KVNMIDLW 226 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTS-EEEEEETT
T ss_pred eEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCC-eEEEEECC
Confidence 444444 47999999999999999999997766442222333 36655554 47777764
No 222
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=32.27 E-value=61 Score=20.69 Aligned_cols=25 Identities=16% Similarity=0.356 Sum_probs=16.0
Q ss_pred eEEEeeCCeEEEEeCCCCeeeEEeec
Q 033675 33 ALVATLNGTVHLVDTKRGESRWSFSM 58 (114)
Q Consensus 33 aLVatlDGTiYLVd~~s~r~~WSFSt 58 (114)
.|+-.-||.+.+.+. .++++|+-.+
T Consensus 53 ~l~l~~dGNLvl~~~-~~~~~W~S~t 77 (109)
T 3dzw_A 53 HLSMQSDGNLVVYSP-RNNPIWASNT 77 (109)
T ss_dssp EEEECTTSCEEEECT-TSCEEEECCC
T ss_pred EEEEeCCCCEEEECC-CCCEEEECCC
Confidence 455556788877765 3577886544
No 223
>3bx4_B Aggretin beta chain; toxin; 1.70A {Agkistrodon rhodostoma} PDB: 2vrp_B
Probab=32.05 E-value=9.7 Score=24.35 Aligned_cols=21 Identities=33% Similarity=0.338 Sum_probs=0.0
Q ss_pred CchhhHHHHHHHHHhhcCCCC
Q 033675 1 MRRSLIFLLLLTVILSSLPPT 21 (114)
Q Consensus 1 mrr~li~ll~~~v~l~s~p~~ 21 (114)
|+|.+.+.++++|++.++...
T Consensus 1 M~~~~~~~~~ll~~~~~~~~~ 21 (146)
T 3bx4_B 1 MGRFIFVSFGLLVVFLSLSGT 21 (146)
T ss_dssp ---------------------
T ss_pred CceeHHHHHHHHHHHHhccCC
Confidence 788766656666666555433
No 224
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=31.99 E-value=1.2e+02 Score=20.50 Aligned_cols=62 Identities=6% Similarity=-0.093 Sum_probs=34.0
Q ss_pred ceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeeeecCCCCceeeeCCcceEeeeecccccee
Q 033675 32 LALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKMK 94 (114)
Q Consensus 32 taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~k 94 (114)
+.++++.+|+|+.++.+++...|....+.| .+-.-.++...|+-...+=.++.-+..-|+.+
T Consensus 42 l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~ 103 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQLSPEMHPSHHQ-NGHCLNKQGHLIACSHGLRRLERQREPGGEWE 103 (296)
T ss_dssp EEEEEGGGTEEEEEETTSCEEEEESSCSSE-EEEEECTTCCEEEEETTTTEEEEECSTTCCEE
T ss_pred EEEEeCCCCEEEEEECCCCeEEEECCCCCc-ceeeECCCCcEEEEecCCCeEEEEcCCCCcEE
Confidence 455556678888888777744444333322 22222223344554444567777777667654
No 225
>2jxw_A WW domain-binding protein 4; WW domain containing protein, FBP21, WBP4, metal- binding, mRNA processing, mRNA splicing, nucleus, polymorphism; NMR {Homo sapiens}
Probab=31.26 E-value=92 Score=19.17 Aligned_cols=28 Identities=25% Similarity=0.289 Sum_probs=23.3
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEe
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSF 56 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSF 56 (114)
...-..+.+-||..|.++..+++.-|..
T Consensus 45 ~~~W~~~~~~~Gr~YyyN~~T~~s~We~ 72 (75)
T 2jxw_A 45 KTVWVEGLSEDGFTYYYNTETGESRWEK 72 (75)
T ss_dssp CCSEEEEEETTTEEEEEETTTTEEESSC
T ss_pred CccEEEEECCCCCEEEEECcCCCEeccC
Confidence 4556777788999999999999998854
No 226
>1wr4_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus} PDB: 2lb2_A*
Probab=31.02 E-value=63 Score=17.04 Aligned_cols=22 Identities=14% Similarity=0.318 Sum_probs=17.6
Q ss_pred EEEeeCCeEEEEeCCCCeeeEE
Q 033675 34 LVATLNGTVHLVDTKRGESRWS 55 (114)
Q Consensus 34 LVatlDGTiYLVd~~s~r~~WS 55 (114)
-.-+-+|.+|.++..+++.-|.
T Consensus 11 ~~~d~~g~~Yy~n~~t~~t~W~ 32 (36)
T 1wr4_A 11 ERKDAKGRTYYVNHNNRTTTWT 32 (36)
T ss_dssp EEECSSSCEEEEETTTTEEESS
T ss_pred EEECCCCCEEEEECCCCCEeCc
Confidence 3344689999999999998884
No 227
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=29.26 E-value=89 Score=20.13 Aligned_cols=24 Identities=17% Similarity=0.180 Sum_probs=12.7
Q ss_pred ceEEEeeCCeEEEEeCCCCeeeEEeec
Q 033675 32 LALVATLNGTVHLVDTKRGESRWSFSM 58 (114)
Q Consensus 32 taLVatlDGTiYLVd~~s~r~~WSFSt 58 (114)
..|+-.-||.+.|.+. +++|+-.+
T Consensus 26 ~~L~~q~dGnLvl~~~---~~vW~snt 49 (110)
T 3r0e_B 26 HQLVMQGDCNLVLYGG---KYGWQSNT 49 (110)
T ss_dssp CEEEECTTSCEEEECS---SSCEECCC
T ss_pred EEEEEcCCCeEEEECC---eEEEECCC
Confidence 4555555666555543 35565444
No 228
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=28.85 E-value=1.8e+02 Score=21.75 Aligned_cols=63 Identities=11% Similarity=0.011 Sum_probs=40.8
Q ss_pred CCceEEEee-CCeEEEEeCCCCeeeEEeecCCCeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 30 GDLALVATL-NGTVHLVDTKRGESRWSFSMGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 30 ~~taLVatl-DGTiYLVd~~s~r~~WSFStGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
.+...|+++ +|+++.+|..++++.-+|..|.|.=......+...|+-.|++ +|++-|..-.|.
T Consensus 75 g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~-~l~viD~~t~~v 138 (266)
T 2iwa_A 75 NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDGWGLATDGKILYGSDGTS-ILYEIDPHTFKL 138 (266)
T ss_dssp TTEEEEEETTCSEEEEEETTTTEEEEEEECCSSSCCEEEECSSSEEEECSSS-EEEEECTTTCCE
T ss_pred CCEEEEEEecCCEEEEEECCCCcEEEEEECCCCCeEEEEECCCEEEEECCCC-eEEEEECCCCcE
Confidence 455666665 689999999999999999887221111111123456666655 787777766555
No 229
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=28.78 E-value=1.4e+02 Score=20.28 Aligned_cols=51 Identities=14% Similarity=0.167 Sum_probs=30.2
Q ss_pred eEEEEeCCCCeeeEEeecCCCeeeeeecCCC-Cc--eeee-------------------------CCcceEeeeeccccc
Q 033675 41 TVHLVDTKRGESRWSFSMGKPIYSSFTRNDP-DF--YVDV-------------------------GEDWKLYFHRKGIGK 92 (114)
Q Consensus 41 TiYLVd~~s~r~~WSFStGsPIYSSYqA~~~-~~--fidc-------------------------gdDW~LY~h~~~~GK 92 (114)
.||+++..+|++.--+..+. .++++-++. .. |... +.+.+||..+..-|+
T Consensus 86 ~l~~~~~~~g~~~~l~~~~~--~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~ 163 (347)
T 2gop_A 86 EIWVADLETLSSKKILEAKN--IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE 163 (347)
T ss_dssp EEEEEETTTTEEEEEEEESE--EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE
T ss_pred eEEEEECCCCceEEEEcCCC--ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe
Confidence 49999988888765544443 333444433 22 2211 125789999988787
Q ss_pred e
Q 033675 93 M 93 (114)
Q Consensus 93 ~ 93 (114)
.
T Consensus 164 ~ 164 (347)
T 2gop_A 164 V 164 (347)
T ss_dssp E
T ss_pred E
Confidence 6
No 230
>2kxq_A E3 ubiquitin-protein ligase smurf2; WW, smurf2, TGF-beta, modular binding, protein BIN; NMR {Homo sapiens} PDB: 2lb0_A* 2laz_A*
Probab=28.64 E-value=1.1e+02 Score=19.47 Aligned_cols=32 Identities=22% Similarity=0.267 Sum_probs=24.2
Q ss_pred CCCCCceEEEeeCCeEEEEeCCCCeeeEEeec
Q 033675 27 PESGDLALVATLNGTVHLVDTKRGESRWSFSM 58 (114)
Q Consensus 27 ~~~~~taLVatlDGTiYLVd~~s~r~~WSFSt 58 (114)
.+.++-.-..+-+|.+|.++..+++--|.--.
T Consensus 9 ~LP~gWe~~~~~~Gr~YY~n~~t~~t~W~~P~ 40 (90)
T 2kxq_A 9 DLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPR 40 (90)
T ss_dssp SCCSSCEEEEETTTEEEEEETTTTEEESSCSS
T ss_pred CCCCCcEEEECCCCCEEEEECCCCeEeeeccc
Confidence 34455555556799999999999999997544
No 231
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=28.35 E-value=1.2e+02 Score=19.50 Aligned_cols=33 Identities=15% Similarity=0.217 Sum_probs=25.9
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecCCC
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMGKP 61 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStGsP 61 (114)
.....|+-.-||.+.|.+.+.++++|+-.+..+
T Consensus 23 ~g~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~ 55 (113)
T 3mez_B 23 TRDYSLVMRDDCNLVLTKGSKTNIVWESGTSGR 55 (113)
T ss_dssp ETTEEEEECTTSCEEEEETTTTEEEEECCCTTS
T ss_pred cCCEEEEEcCCCEEEEEECCCCEEEEECCcccC
Confidence 356778888899999998767899999766543
No 232
>2djy_A SMAD ubiquitination regulatory factor 2; beta sheet, polyproline type II helix, PPII, ligase/signaling protein complex; NMR {Homo sapiens} PDB: 2lb1_A
Probab=28.13 E-value=87 Score=17.78 Aligned_cols=26 Identities=19% Similarity=0.330 Sum_probs=19.7
Q ss_pred CCceEEEeeCCeEEEEeCCCCeeeEE
Q 033675 30 GDLALVATLNGTVHLVDTKRGESRWS 55 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r~~WS 55 (114)
..-.-..+-+|.+|+++..+++--|.
T Consensus 10 ~GWe~~~~~~G~~Yy~nh~t~~ttW~ 35 (42)
T 2djy_A 10 PGWEIRNTATGRVYFVDHNNRTTQFT 35 (42)
T ss_dssp SSEEEEECSSSCEEEEETTTTEEESS
T ss_pred cCcEEEECCCCCEEEEECCCCCEeCC
Confidence 34444446799999999999988883
No 233
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=28.12 E-value=32 Score=22.37 Aligned_cols=45 Identities=20% Similarity=0.335 Sum_probs=21.8
Q ss_pred hcCCCCC-CCCCCCCCCceEEEeeCCeEEEEeCCC--CeeeEEeecCC
Q 033675 16 SSLPPTS-PRASPESGDLALVATLNGTVHLVDTKR--GESRWSFSMGK 60 (114)
Q Consensus 16 ~s~p~~s-~~~~~~~~~taLVatlDGTiYLVd~~s--~r~~WSFStGs 60 (114)
.+-+|.+ +.+..+.-..+.|.--||.|.|+.... ..-.|.|-.|.
T Consensus 15 ~~~~p~~m~~~~~~~~~v~~vi~~~~~vLL~~r~~~~~~~~w~lPgG~ 62 (157)
T 4dyw_A 15 QTQGPGSMQHTEQPRVGCGAAIVRDGRILLIKRKRAPEAGCWGLPGGK 62 (157)
T ss_dssp -----------CCCEEEEEEEEEETTEEEEEEECSSSSTTCEECCEEE
T ss_pred cCCCCCCCCCCCCceeEEEEEEEECCEEEEEEecCCCCCCEEECCccc
Confidence 3334433 333333334444444599999996554 45679998664
No 234
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=27.77 E-value=1.5e+02 Score=20.44 Aligned_cols=77 Identities=16% Similarity=0.215 Sum_probs=42.1
Q ss_pred CCCCceEEEeeC--CeEEEEeCC--CCe--eeEEeecCCCeeeeeecCCC-C-ceeeeCCcc--eEeeeeccccceeeec
Q 033675 28 ESGDLALVATLN--GTVHLVDTK--RGE--SRWSFSMGKPIYSSFTRNDP-D-FYVDVGEDW--KLYFHRKGIGKMKDIM 97 (114)
Q Consensus 28 ~~~~taLVatlD--GTiYLVd~~--s~r--~~WSFStGsPIYSSYqA~~~-~-~fidcgdDW--~LY~h~~~~GK~kl~~ 97 (114)
+.....+|+..+ ++|.+++.+ +|+ ....+..|.... ....++. . .|+-+.++- .+|.-+..-|+.+...
T Consensus 268 pdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~-~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 268 PDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPR-NFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp TTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCC-EEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred CCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCc-eEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 344445566654 778776553 454 566666654332 2233333 2 356554444 4555677788885543
Q ss_pred ---ccCCCcee
Q 033675 98 ---KSTTPNCY 105 (114)
Q Consensus 98 ---~s~~~~~~ 105 (114)
....|+|-
T Consensus 347 ~~~~~~~p~~v 357 (361)
T 3scy_A 347 KDIKVDKPVCL 357 (361)
T ss_dssp CCEECSSEEEE
T ss_pred eeeeCCCCeEE
Confidence 33467774
No 235
>2a3m_A COG3005: nitrate/TMAO reductases, membrane-bound cytochrome C subunit; tetraheme cytochrome, electron transport; HET: HEM; 1.50A {Desulfovibrio desulfuricans subsp} PDB: 2a3p_A*
Probab=27.76 E-value=13 Score=25.45 Aligned_cols=20 Identities=30% Similarity=0.443 Sum_probs=0.0
Q ss_pred Cch-hhHHHHHHHHHhhcCCC
Q 033675 1 MRR-SLIFLLLLTVILSSLPP 20 (114)
Q Consensus 1 mrr-~li~ll~~~v~l~s~p~ 20 (114)
||| ++|++++.+|++..+|.
T Consensus 1 Mkk~~~~~~~~~~~~~~~~~a 21 (130)
T 2a3m_A 1 MRKSLFAVMVLALVAAFALPV 21 (130)
T ss_dssp ---------------------
T ss_pred CchhHHHHHHHHHHHHHHHHH
Confidence 777 44442344555555553
No 236
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=26.04 E-value=39 Score=29.35 Aligned_cols=30 Identities=23% Similarity=0.377 Sum_probs=26.3
Q ss_pred CCCceEEEeeCCeEEEEeCCCCeeeEEeecC
Q 033675 29 SGDLALVATLNGTVHLVDTKRGESRWSFSMG 59 (114)
Q Consensus 29 ~~~taLVatlDGTiYLVd~~s~r~~WSFStG 59 (114)
.+..++|++=||-+|.++.+ |+-.|.|=..
T Consensus 84 R~~~VyvGaNDGmLHaF~a~-G~E~wAfiP~ 113 (570)
T 3hx6_A 84 RAPRVYVGANDGMLHGFDTD-GNETFAFIPS 113 (570)
T ss_dssp CCCEEEEECSSSCEEECCSS-CCCCEEECCH
T ss_pred CccEEEEECCCceEEEECCC-CcEEEEECCH
Confidence 45788999999999999988 9999999654
No 237
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=25.89 E-value=1.7e+02 Score=20.26 Aligned_cols=60 Identities=8% Similarity=0.031 Sum_probs=35.8
Q ss_pred CCceEEEeeCCeEEEEeCCCCe--eeEEee-cCCCeeeeeecCC--CCceeeeCCcceEeeeecc
Q 033675 30 GDLALVATLNGTVHLVDTKRGE--SRWSFS-MGKPIYSSFTRND--PDFYVDVGEDWKLYFHRKG 89 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r--~~WSFS-tGsPIYSSYqA~~--~~~fidcgdDW~LY~h~~~ 89 (114)
....+.|+.||+|.++|..+++ ..-.+. -.+++.+---.|+ ...++-+++|=.+...+..
T Consensus 71 ~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~ 135 (316)
T 3bg1_A 71 GNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYT 135 (316)
T ss_dssp SSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEEC
T ss_pred CCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecC
Confidence 4567788999999999988773 444443 2334544322222 2356666777555554443
No 238
>2ysi_A Transcription elongation regulator 1; Ca150, FBP28, WW domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.22.1.1
Probab=25.50 E-value=98 Score=17.46 Aligned_cols=26 Identities=23% Similarity=0.307 Sum_probs=20.8
Q ss_pred CCceEEEeeCCeEEEEeCCCCeeeEE
Q 033675 30 GDLALVATLNGTVHLVDTKRGESRWS 55 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r~~WS 55 (114)
+.-.-.-+-||..|.....+++--|.
T Consensus 10 ~~W~e~~~~~G~~YYyN~~T~eS~We 35 (40)
T 2ysi_A 10 EIWVENKTPDGKVYYYNARTRESAWT 35 (40)
T ss_dssp CSEEEEECTTSCEEEEETTTCCEESS
T ss_pred CCCEEEECCCCCEEEEECCCCCEEeC
Confidence 34444558899999999999999884
No 239
>1yu0_A Major tropism determinant (MTD-P1); C-type lectin, beta sandwich, beta prism, variability, diver generating retroelement, viral protein; 1.56A {Bordetella phage bpp-1} SCOP: b.163.1.1 d.169.1.8 PDB: 2iou_A 1yu1_A 1yu2_A 1yu4_A 1yu3_A
Probab=25.41 E-value=1.9e+02 Score=24.23 Aligned_cols=67 Identities=19% Similarity=0.317 Sum_probs=49.6
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEeecCCCeeeee----ecCCCCceeeeCCcceEeeeeccccceeeecccCCCc
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFSMGKPIYSSF----TRNDPDFYVDVGEDWKLYFHRKGIGKMKDIMKSTTPN 103 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFStGsPIYSSY----qA~~~~~fidcgdDW~LY~h~~~~GK~kl~~~s~~~~ 103 (114)
.++..+|+++-++++-++ .|.++|- |.-||+ | .++.++ +.-|+|.-+|.++ -|+....++.|-|.
T Consensus 61 ~~~~~~~~~t~~~~~~~~---~g~~i~~---~~~~~~-~~~~t~~~~~~--~~~g~dyyiy~~~--~g~~~~~~~~t~p~ 129 (381)
T 1yu0_A 61 DKSAVAFTRTGNATASIK---AGTIVEV---NGKLVQ-FTADTAITMPA--LTAGTDYAIYVCD--DGTVRADSNFSAPT 129 (381)
T ss_dssp CTTSCSEEEEETTEEEEC---TTEEEEE---TTEEEE-ESSCEECBCCC--CCTTEEEEEEEET--TSCEEEESCSSCCT
T ss_pred ccceEEEEEecCCeeEEE---eeeEEee---CCeeEE-EehhhhhcCcc--ccCCccEEEEEec--CCcEeccccccCCC
Confidence 377889999999999886 5778876 333554 3 222333 6789999999996 68899999998885
Q ss_pred ee
Q 033675 104 CY 105 (114)
Q Consensus 104 ~~ 105 (114)
-|
T Consensus 130 g~ 131 (381)
T 1yu0_A 130 GY 131 (381)
T ss_dssp TC
T ss_pred CC
Confidence 43
No 240
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=25.14 E-value=1.5e+02 Score=19.34 Aligned_cols=61 Identities=8% Similarity=0.038 Sum_probs=27.7
Q ss_pred CceEEEee-CCeEEEEeCCCCeeeEEe-e-cCCCeeeeeecCCCCceeeeCCcceEeeeeccccce
Q 033675 31 DLALVATL-NGTVHLVDTKRGESRWSF-S-MGKPIYSSFTRNDPDFYVDVGEDWKLYFHRKGIGKM 93 (114)
Q Consensus 31 ~taLVatl-DGTiYLVd~~s~r~~WSF-S-tGsPIYSSYqA~~~~~fidcgdDW~LY~h~~~~GK~ 93 (114)
...+|++. +|.|+.++.+ ++...-. . .+..+++-...++...|+-...+=.++.-+.. |+.
T Consensus 26 g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~ 89 (299)
T 2z2n_A 26 GKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII 89 (299)
T ss_dssp SCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE
Confidence 34555554 5677777766 5543221 1 12223332222333445544433356555544 554
No 241
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=24.85 E-value=2e+02 Score=20.86 Aligned_cols=34 Identities=12% Similarity=0.254 Sum_probs=26.3
Q ss_pred CCCCCceEEEee--CCeEEEEeCCCCeeeEE-eecCC
Q 033675 27 PESGDLALVATL--NGTVHLVDTKRGESRWS-FSMGK 60 (114)
Q Consensus 27 ~~~~~taLVatl--DGTiYLVd~~s~r~~WS-FStGs 60 (114)
++.....+|+.. +++|.++|..++++.-. +..+.
T Consensus 116 spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~ 152 (361)
T 2oiz_A 116 TTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG 152 (361)
T ss_dssp CTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT
T ss_pred CCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC
Confidence 446667888875 58999999999999877 65544
No 242
>2l5f_A PRE-mRNA-processing factor 40 homolog A; 2WW, HYPA, FBP11, protein binding; NMR {Homo sapiens}
Probab=24.76 E-value=1e+02 Score=19.76 Aligned_cols=35 Identities=14% Similarity=0.117 Sum_probs=25.9
Q ss_pred CCCCCCceEEEeeCCeEEEEeCCCCeeeEEeecCC
Q 033675 26 SPESGDLALVATLNGTVHLVDTKRGESRWSFSMGK 60 (114)
Q Consensus 26 ~~~~~~taLVatlDGTiYLVd~~s~r~~WSFStGs 60 (114)
+.+.+.-.-..+.||.+|.+...+++--|.--.+.
T Consensus 10 ~~lp~~W~e~~~~~Gr~YYyN~~T~~s~We~P~~~ 44 (92)
T 2l5f_A 10 SGAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDDL 44 (92)
T ss_dssp TBTTTTEEEEECTTSCEEEEETTTTEEESSCSGGG
T ss_pred CCCCCCcEEEEcCCCCEEEEECCCCceecccCccc
Confidence 34445555555669999999999999999766544
No 243
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=24.37 E-value=2.7e+02 Score=22.18 Aligned_cols=64 Identities=8% Similarity=0.216 Sum_probs=34.8
Q ss_pred CCceEEEeeCCeEEEEeCCCCeeeEEeecCCCe--e----eeeecCCCCceeeeCCc----c------eEeeeeccccce
Q 033675 30 GDLALVATLNGTVHLVDTKRGESRWSFSMGKPI--Y----SSFTRNDPDFYVDVGED----W------KLYFHRKGIGKM 93 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r~~WSFStGsPI--Y----SSYqA~~~~~fidcgdD----W------~LY~h~~~~GK~ 93 (114)
++..++++-||+|++++..+|+.. .+-+|... + .+|+.+|.+-+|=.+-+ | .+|..+..-|+.
T Consensus 26 ~dg~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~ 104 (740)
T 4a5s_A 26 SDHEYLYKQENNILVFNAEYGNSS-VFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQL 104 (740)
T ss_dssp SSSEEEEEETTEEEEEETTTCCEE-EEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE
T ss_pred CCCcEEEEcCCcEEEEECCCCceE-EEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcE
Confidence 344555555999999998888753 22222211 1 12555655444333222 2 456666666665
Q ss_pred e
Q 033675 94 K 94 (114)
Q Consensus 94 k 94 (114)
+
T Consensus 105 ~ 105 (740)
T 4a5s_A 105 I 105 (740)
T ss_dssp C
T ss_pred E
Confidence 4
No 244
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A*
Probab=23.22 E-value=78 Score=25.60 Aligned_cols=54 Identities=13% Similarity=0.166 Sum_probs=19.5
Q ss_pred hhHHHHHHHHHhhcCCCCCCCCCCCCCCceEEEeeCCeEEEEeCCCC--eeeEEee
Q 033675 4 SLIFLLLLTVILSSLPPTSPRASPESGDLALVATLNGTVHLVDTKRG--ESRWSFS 57 (114)
Q Consensus 4 ~li~ll~~~v~l~s~p~~s~~~~~~~~~taLVatlDGTiYLVd~~s~--r~~WSFS 57 (114)
.||..+|..++..+.|-....+....++-..+..-++.|+.++...| ++.+=.-
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~G~~iv~~~~~~G~~~~v~l~G 65 (458)
T 3qho_A 10 VLICTILAGLFGQVVPVYAENTTYQTPTGIYYEVRGDTIYMINVTSGEETPIHLFG 65 (458)
T ss_dssp ------------------------CCSSSEEEEEETTEEEEEETTTCCEEECCCEE
T ss_pred HHHHHHHHHHHhcccccccccCcCCCCCCCeEEEECCEEEEecCCCCCcceEEEEE
Confidence 44444443333334433322222224455678888898888765455 6654333
No 245
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=23.10 E-value=1.8e+02 Score=19.77 Aligned_cols=30 Identities=10% Similarity=-0.007 Sum_probs=21.2
Q ss_pred CCCCCceEEEeeCCeEEEEeCCCCeeeEEe
Q 033675 27 PESGDLALVATLNGTVHLVDTKRGESRWSF 56 (114)
Q Consensus 27 ~~~~~taLVatlDGTiYLVd~~s~r~~WSF 56 (114)
++.....++++.+++||+++..+++..--+
T Consensus 89 spdg~~l~~~~~~~~l~~~d~~~~~~~~~~ 118 (396)
T 3c5m_A 89 STDERAFFYVKNELNLMKVDLETLEEQVIY 118 (396)
T ss_dssp CTTSSEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred CCCCCEEEEEEcCCcEEEEECCCCCcEEEE
Confidence 444555667778889999999888754333
No 246
>1i5h_W Rnedd4, ubiquitin ligase NEDD4; NEDD4, WW domains, ENAC, PY motif, liddle syndrome, proline-rich, ligase; NMR {Rattus norvegicus} SCOP: b.72.1.1 PDB: 1yiu_A 2jo9_A 2joc_A*
Probab=22.97 E-value=1.2e+02 Score=17.74 Aligned_cols=29 Identities=10% Similarity=0.231 Sum_probs=21.5
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEe
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSF 56 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSF 56 (114)
+-+.-.-..+-+|.+|+++..+++--|.-
T Consensus 12 LP~gWe~~~~~~Gr~Yy~nh~t~~T~We~ 40 (50)
T 1i5h_W 12 LPPGWEERTHTDGRVFFINHNIKKTQWED 40 (50)
T ss_dssp CSTTEEEEECTTSCEEEEETTTTEEESSC
T ss_pred CCcCcEEEEcCCCCEEEEECCCCCEEeeC
Confidence 33444444567999999999999988853
No 247
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=22.09 E-value=87 Score=20.22 Aligned_cols=29 Identities=10% Similarity=0.028 Sum_probs=17.5
Q ss_pred CCceEEEeeCCeEEEEeCCCCeeeEEeecCCC
Q 033675 30 GDLALVATLNGTVHLVDTKRGESRWSFSMGKP 61 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r~~WSFStGsP 61 (114)
....|+-.-||.+.|.+... +|+-.+..+
T Consensus 20 g~~~L~~q~dGnLvl~~~~~---vW~snt~~~ 48 (111)
T 3mez_A 20 ESAAFVMQGDCNLVLYNEAG---GFQSNTHGR 48 (111)
T ss_dssp TTEEEEECTTSCEEEECSSC---CEECCCTTS
T ss_pred CCEEEEEccCCeEEEECCCC---EEECCcccC
Confidence 44566666677777765542 777655443
No 248
>1o6w_A PRP40, PRE-mRNA processing protein PRP40; WW domain PAIR, nuclear protein, mRNA splicing, ribonucleoprotein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1 b.72.1.1
Probab=21.82 E-value=71 Score=19.37 Aligned_cols=27 Identities=19% Similarity=0.384 Sum_probs=22.2
Q ss_pred CceEEEeeCCeEEEEeCCCCeeeEEee
Q 033675 31 DLALVATLNGTVHLVDTKRGESRWSFS 57 (114)
Q Consensus 31 ~taLVatlDGTiYLVd~~s~r~~WSFS 57 (114)
.-..+-+-+|.+|+++..+++--|..-
T Consensus 44 gW~~~~~~~Gr~Yy~n~~t~~t~W~~P 70 (75)
T 1o6w_A 44 GWKAAKTADGKVYYYNPTTRETSWTIP 70 (75)
T ss_dssp TCEEEECTTCCEEEEETTTTEEESSCC
T ss_pred eEEEEECCCCCEEEEECCCCCEECCCC
Confidence 455667789999999999999998654
No 249
>3ffv_A Protein SYD; membrane, translocon, secyeg, nanodisc, cell inner membrane, cell membrane, protein binding; 2.00A {Escherichia coli}
Probab=21.60 E-value=97 Score=23.33 Aligned_cols=25 Identities=28% Similarity=0.109 Sum_probs=21.0
Q ss_pred CCCceEEEeeC--CeEEEEeCCCCeee
Q 033675 29 SGDLALVATLN--GTVHLVDTKRGESR 53 (114)
Q Consensus 29 ~~~taLVatlD--GTiYLVd~~s~r~~ 53 (114)
-+.|.|+|+.| +.|--|++.||++.
T Consensus 128 ~~PT~FIg~td~e~~lIsv~N~sGeV~ 154 (181)
T 3ffv_A 128 LPPTLFIATLEEELEVISVCNLSGEVC 154 (181)
T ss_dssp CCCEEEEEECSSTTEEEEEETTTCCEE
T ss_pred CCCcEEEEEecCCCcEEEEECCCCeEE
Confidence 35689999986 68999999999985
No 250
>2qzu_A Putative sulfatase YIDJ; Q64XZ4_bacfr, arylsulfatase, BFR123, NESG, structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides fragilis}
Probab=21.59 E-value=49 Score=25.70 Aligned_cols=32 Identities=9% Similarity=0.071 Sum_probs=12.6
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCceEEEe
Q 033675 6 IFLLLLTVILSSLPPTSPRASPESGDLALVAT 37 (114)
Q Consensus 6 i~ll~~~v~l~s~p~~s~~~~~~~~~taLVat 37 (114)
|++|+++.+..+.+..+.++.+.++++.||.+
T Consensus 4 ~~~~~~~~~~~~~~~~~a~~~~~~PNIv~I~~ 35 (491)
T 2qzu_A 4 IIPQALLTMPILSTGLQAQEKQPTPNLVFIMA 35 (491)
T ss_dssp --------------CCSCCCCCSSCEEEEEEE
T ss_pred hHhHHHHHHHhhcccccccccCCCCCEEEEEe
Confidence 44455555666777777776566778777654
No 251
>2jmf_A E3 ubiquitin-protein ligase suppressor of deltex; WW domain, solution, complex, ligase/signaling protein complex; NMR {Drosophila melanogaster} SCOP: b.72.1.1 PDB: 2op7_A
Probab=21.57 E-value=1.3e+02 Score=18.05 Aligned_cols=28 Identities=14% Similarity=0.172 Sum_probs=20.9
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEE
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWS 55 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WS 55 (114)
+-..-.--.+-+|.+|+++..+++--|.
T Consensus 19 LP~GWe~~~~~~Gr~Yyinh~tk~TtW~ 46 (53)
T 2jmf_A 19 LPPGWEIRYTAAGERFFVDHNTRRTTFE 46 (53)
T ss_dssp CCTTEEEEECTTSCEEEEETTTCCEESS
T ss_pred CCcCcEEEEcCCCCEEEEeCCCCcEecC
Confidence 3344444455799999999999998884
No 252
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=21.28 E-value=1.8e+02 Score=22.47 Aligned_cols=32 Identities=16% Similarity=0.195 Sum_probs=26.3
Q ss_pred CCCceEEEee--CCeEEEEeCCCCeeeEEeecCC
Q 033675 29 SGDLALVATL--NGTVHLVDTKRGESRWSFSMGK 60 (114)
Q Consensus 29 ~~~taLVatl--DGTiYLVd~~s~r~~WSFStGs 60 (114)
.....+|+.. +|+|..+|..++|+.=++..|.
T Consensus 324 Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~ 357 (368)
T 1mda_H 324 DGASDNYANSAGTEVLDIYDAASDQDQSSVELDK 357 (368)
T ss_dssp SSSCEEEEEETTTTEEEEEESSSCEEEEECCCCS
T ss_pred CCCEEEEEccCCCCeEEEEECCCCcEEEEEECCC
Confidence 4456788886 8999999999999997777665
No 253
>2dwv_A Salvador homolog 1 protein; WW domain, dimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=21.00 E-value=1.4e+02 Score=17.56 Aligned_cols=30 Identities=10% Similarity=0.032 Sum_probs=23.5
Q ss_pred CCCCceEEEeeCCeEEEEeCCCCeeeEEee
Q 033675 28 ESGDLALVATLNGTVHLVDTKRGESRWSFS 57 (114)
Q Consensus 28 ~~~~taLVatlDGTiYLVd~~s~r~~WSFS 57 (114)
+-..-.-.-+.+|.+|+|+..+++--|.--
T Consensus 14 LP~GWe~~~d~~g~~YYvnh~t~~T~We~P 43 (49)
T 2dwv_A 14 LPPGWERVESSEFGTYYVDHTNKRAQYRHP 43 (49)
T ss_dssp CCTTEEEEEETTTEEEEEETTTTEEESSCC
T ss_pred CCcCcEEEECCCCCEEEEECCCCCEeccCc
Confidence 345566667779999999999999888643
No 254
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=20.97 E-value=2.2e+02 Score=19.84 Aligned_cols=22 Identities=23% Similarity=0.413 Sum_probs=13.1
Q ss_pred EEeeCCeEEEEeCCCCeeeEEee
Q 033675 35 VATLNGTVHLVDTKRGESRWSFS 57 (114)
Q Consensus 35 VatlDGTiYLVd~~s~r~~WSFS 57 (114)
..+.||+||+.|...+++ +.|.
T Consensus 38 a~~~~g~lyv~d~~~~~I-~~~d 59 (306)
T 2p4o_A 38 ASAPDGTIFVTNHEVGEI-VSIT 59 (306)
T ss_dssp EECTTSCEEEEETTTTEE-EEEC
T ss_pred EECCCCCEEEEeCCCCeE-EEEC
Confidence 334467777777666553 5554
No 255
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=20.79 E-value=82 Score=20.67 Aligned_cols=29 Identities=14% Similarity=0.279 Sum_probs=18.8
Q ss_pred CceEEEeeCCeEEEEeCCCCeeeEEeecCCC
Q 033675 31 DLALVATLNGTVHLVDTKRGESRWSFSMGKP 61 (114)
Q Consensus 31 ~taLVatlDGTiYLVd~~s~r~~WSFStGsP 61 (114)
..+|.-.-||.+.+.+. +++.|+=.+..|
T Consensus 31 ~~~L~~~~dgnlvly~~--~~~vW~sn~~~~ 59 (119)
T 1b2p_A 31 VYRFIMQTDCNLVLYDN--NNPIWATNTGGL 59 (119)
T ss_dssp EEEEEECTTSCEEEEET--TEEEEECCCTTS
T ss_pred CEEEEEecCCCEEEEEC--CEEEEeCCCccC
Confidence 34444445777777665 788898766554
No 256
>2bcf_A Probable D-alanyl-D-alanine carboxypeptidase DACB2; penicillin-binding protein, DD-2 carboxypeptidase, directed evolution; 2.30A {Mycobacterium tuberculosis}
Probab=20.37 E-value=2e+02 Score=21.61 Aligned_cols=24 Identities=13% Similarity=-0.078 Sum_probs=21.2
Q ss_pred CeEEEEeCCCCeeeEEeecCCCee
Q 033675 40 GTVHLVDTKRGESRWSFSMGKPIY 63 (114)
Q Consensus 40 GTiYLVd~~s~r~~WSFStGsPIY 63 (114)
..++++|.++|+++|+.+...+.+
T Consensus 20 ~~~~v~D~~tG~vl~~~n~d~~~~ 43 (276)
T 2bcf_A 20 QTWIVADLDSGQVLAGRDQNVAHP 43 (276)
T ss_dssp SEEEEEETTTCEEEEEESTTCCBC
T ss_pred cEEEEEECCCCCEEEEECCCCcCC
Confidence 467888999999999999999887
No 257
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=20.34 E-value=2.1e+02 Score=19.44 Aligned_cols=61 Identities=11% Similarity=0.091 Sum_probs=34.8
Q ss_pred CCceEEEeeCCeEEEEeCCCCe--eeEEee-cCCCeeeeeecCC---CCceeeeCCcceEeeeecccc
Q 033675 30 GDLALVATLNGTVHLVDTKRGE--SRWSFS-MGKPIYSSFTRND---PDFYVDVGEDWKLYFHRKGIG 91 (114)
Q Consensus 30 ~~taLVatlDGTiYLVd~~s~r--~~WSFS-tGsPIYSSYqA~~---~~~fidcgdDW~LY~h~~~~G 91 (114)
....+.|+.||+|.+++..+++ ..-.+. ...++.+- +..+ ...++-+++|=.+.+-+..-+
T Consensus 67 g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v-~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 67 GTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSV-QWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp CSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEE-EECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred CCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEE-EeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 4566778899999999988774 332332 12344433 3222 234666666655555544433
Done!