Your job contains 1 sequence.
>033677
MFRCHPKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNS
VASLSYNHGGQLLAVASSCTYQEATVIEEPPQIFIIRIDDIQQQSACVGSSSRH
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 033677
(114 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2026446 - symbol:AT1G69400 "AT1G69400" species... 301 9.4e-27 1
TAIR|locus:2091211 - symbol:BUB3.1 "AT3G19590" species:37... 211 5.1e-17 1
TAIR|locus:2007248 - symbol:BUB3.2 "AT1G49910" species:37... 206 1.9e-16 1
WB|WBGene00013209 - symbol:bub-3 species:6239 "Caenorhabd... 169 3.1e-12 1
UNIPROTKB|Q9XWH0 - symbol:bub-3 "Protein BUB-3" species:6... 169 3.1e-12 1
DICTYBASE|DDB_G0292134 - symbol:bub3 "putative mitotic ch... 166 6.0e-12 1
ZFIN|ZDB-GENE-041010-210 - symbol:bub3 "BUB3 budding unin... 159 3.4e-11 1
ASPGD|ASPL0000047688 - symbol:sldB species:162425 "Emeric... 156 9.4e-11 1
UNIPROTKB|B4DDM6 - symbol:BUB3 "cDNA FLJ57899, highly sim... 151 9.5e-11 1
UNIPROTKB|Q5ZHW3 - symbol:BUB3 "Uncharacterized protein" ... 155 9.8e-11 1
UNIPROTKB|Q1JQB2 - symbol:BUB3 "Mitotic checkpoint protei... 151 2.7e-10 1
MGI|MGI:1343463 - symbol:Bub3 "budding uninhibited by ben... 151 2.7e-10 1
UNIPROTKB|O43684 - symbol:BUB3 "Mitotic checkpoint protei... 151 2.7e-10 1
UNIPROTKB|F2Z5F3 - symbol:BUB3 "Uncharacterized protein" ... 151 2.7e-10 1
UNIPROTKB|Q5RB58 - symbol:BUB3 "Mitotic checkpoint protei... 151 2.7e-10 1
POMBASE|SPAC23H3.08c - symbol:bub3 "mitotic spindle check... 138 6.9e-09 1
FB|FBgn0025457 - symbol:Bub3 "Bub3" species:7227 "Drosoph... 121 5.4e-07 1
SGD|S000000909 - symbol:GLE2 "RNA export factor associate... 117 1.8e-06 1
TAIR|locus:2025732 - symbol:RAE1 "AT1G80670" species:3702... 114 3.6e-06 1
UNIPROTKB|G4N5H8 - symbol:MGG_06111 "Mitotic checkpoint p... 114 3.6e-06 1
UNIPROTKB|G4NDD2 - symbol:MGG_00946 "Poly(A)+ RNA export ... 112 6.2e-06 1
POMBASE|SPBC16A3.05c - symbol:rae1 "RNA export factor, nu... 111 7.7e-06 1
CGD|CAL0001281 - symbol:orf19.1095 species:5476 "Candida ... 97 1.3e-05 2
UNIPROTKB|Q59QW3 - symbol:GLE2 "Likely WD40 repeat nuclea... 97 1.3e-05 2
FB|FBgn0034646 - symbol:Rae1 "Rae1" species:7227 "Drosoph... 108 1.7e-05 1
CGD|CAL0003474 - symbol:BUB3 species:5476 "Candida albica... 108 1.8e-05 1
RGD|1311540 - symbol:Rae1 "RAE1 RNA export 1 homolog (S. ... 104 4.8e-05 1
DICTYBASE|DDB_G0283835 - symbol:rae1 "putative mRNA expor... 103 5.4e-05 1
ASPGD|ASPL0000060741 - symbol:sonA species:162425 "Emeric... 103 6.0e-05 1
UNIPROTKB|Q7ZZY7 - symbol:Rae1/Gle2 "Rae1/Gle2" species:8... 102 7.9e-05 1
MGI|MGI:1913929 - symbol:Rae1 "RAE1 RNA export 1 homolog ... 102 7.9e-05 1
UNIPROTKB|J3QT28 - symbol:BUB3 "Mitotic checkpoint protei... 98 0.00013 1
SGD|S000005552 - symbol:BUB3 "Kinetochore checkpoint WD40... 99 0.00015 1
UNIPROTKB|E1C7F8 - symbol:Gga.22300 "Uncharacterized prot... 99 0.00017 1
UNIPROTKB|Q5E9A4 - symbol:RAE1 "mRNA export factor" speci... 99 0.00017 1
UNIPROTKB|E2RSV2 - symbol:RAE1 "Uncharacterized protein" ... 99 0.00017 1
UNIPROTKB|P78406 - symbol:RAE1 "mRNA export factor" speci... 99 0.00017 1
UNIPROTKB|A5GFN6 - symbol:RAE1 "mRNA export factor" speci... 99 0.00017 1
UNIPROTKB|E1BDF6 - symbol:E1BDF6 "Uncharacterized protein... 77 0.00026 2
UNIPROTKB|Q29RH4 - symbol:THOC3 "THO complex subunit 3" s... 77 0.00026 2
UNIPROTKB|E2RC43 - symbol:THOC3 "Uncharacterized protein"... 77 0.00026 2
UNIPROTKB|Q96J01 - symbol:THOC3 "THO complex subunit 3" s... 77 0.00026 2
UNIPROTKB|F1S386 - symbol:THOC3 "Uncharacterized protein"... 77 0.00026 2
MGI|MGI:1920916 - symbol:Thoc3 "THO complex 3" species:10... 77 0.00026 2
RGD|1311669 - symbol:Thoc3 "THO complex 3" species:10116 ... 77 0.00026 2
SGD|S000004951 - symbol:LST8 "Protein required for the tr... 94 0.00042 1
ZFIN|ZDB-GENE-040426-1029 - symbol:rae1 "RAE1 RNA export ... 94 0.00058 1
UNIPROTKB|G4MUL1 - symbol:MGG_07284 "Target-rapamycin com... 93 0.00059 1
>TAIR|locus:2026446 [details] [associations]
symbol:AT1G69400 "AT1G69400" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 KO:K02180 GO:GO:0080008
IPI:IPI00525022 RefSeq:NP_564965.1 UniGene:At.35426
ProteinModelPortal:F4I241 SMR:F4I241 EnsemblPlants:AT1G69400.1
GeneID:843272 KEGG:ath:AT1G69400 OMA:YSFRCHP Uniprot:F4I241
Length = 314
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 57/90 (63%), Positives = 72/90 (80%)
Query: 2 FRCHPKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSV 61
FRCHPKS++GR V +N + FSP G FVTGDNEGYV +W+A+SRRRL ELPR+SNS+
Sbjct: 218 FRCHPKSRNGRLDGVCINAIEFSPCGSGTFVTGDNEGYVISWNAKSRRRLNELPRYSNSI 277
Query: 62 ASLSYNHGGQLLAVASSCTYQEATVIEEPP 91
ASL+++H G+LLA+ASS TYQ+A EE P
Sbjct: 278 ASLAFDHTGELLAIASSHTYQDAKEKEEAP 307
>TAIR|locus:2091211 [details] [associations]
symbol:BUB3.1 "AT3G19590" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0000776 "kinetochore"
evidence=IDA] [GO:0007094 "mitotic spindle assembly checkpoint"
evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000776
GO:GO:0007094 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AP000417 GO:GO:0009524
HOGENOM:HOG000208822 KO:K02180 OMA:NAISFHS GO:GO:0080008
ProtClustDB:CLSN2682694 UniGene:At.8134 EMBL:AY087404 EMBL:BT004273
EMBL:BT006152 IPI:IPI00532277 PIR:T52386 RefSeq:NP_566644.1
ProteinModelPortal:Q9LJN8 SMR:Q9LJN8 IntAct:Q9LJN8 STRING:Q9LJN8
PaxDb:Q9LJN8 PRIDE:Q9LJN8 EnsemblPlants:AT3G19590.1 GeneID:821496
KEGG:ath:AT3G19590 TAIR:At3g19590 InParanoid:Q9LJN8
PhylomeDB:Q9LJN8 ArrayExpress:Q9LJN8 Genevestigator:Q9LJN8
Uniprot:Q9LJN8
Length = 340
Score = 211 (79.3 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 38/89 (42%), Positives = 60/89 (67%)
Query: 2 FRCHPKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSV 61
F+CH KS+ GR + PVN + F P+ G F TG +G+V WD +++RL++ ++ S+
Sbjct: 228 FKCHRKSEAGRDIVYPVNSIAFHPIY-GTFATGGCDGFVNIWDGNNKKRLYQYSKYPTSI 286
Query: 62 ASLSYNHGGQLLAVASSCTYQEATVIEEP 90
++LS++ GQLLAVASS T++E +EP
Sbjct: 287 SALSFSRDGQLLAVASSYTFEEGEKSQEP 315
>TAIR|locus:2007248 [details] [associations]
symbol:BUB3.2 "AT1G49910" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000208822 KO:K02180
EMBL:AC074110 IPI:IPI00527088 RefSeq:NP_175413.1 UniGene:At.38135
ProteinModelPortal:Q9C701 SMR:Q9C701 STRING:Q9C701
EnsemblPlants:AT1G49910.1 GeneID:841414 KEGG:ath:AT1G49910
TAIR:At1g49910 InParanoid:Q9C701 OMA:SEDGRDI PhylomeDB:Q9C701
ProtClustDB:CLSN2682694 ArrayExpress:Q9C701 Genevestigator:Q9C701
Uniprot:Q9C701
Length = 339
Score = 206 (77.6 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 38/89 (42%), Positives = 59/89 (66%)
Query: 2 FRCHPKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSV 61
F+CH KS+DGR + PVN + F P+ G F +G +G+V WD +++RL++ ++ S+
Sbjct: 227 FKCHRKSEDGRDIVYPVNAIAFHPIY-GTFASGGCDGFVNIWDGNNKKRLYQYSKYPTSI 285
Query: 62 ASLSYNHGGQLLAVASSCTYQEATVIEEP 90
A+LS++ G LLAVASS T++E EP
Sbjct: 286 AALSFSRDGGLLAVASSYTFEEGDKPHEP 314
>WB|WBGene00013209 [details] [associations]
symbol:bub-3 species:6239 "Caenorhabditis elegans"
[GO:0007067 "mitosis" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI] [GO:0007094 "mitotic
spindle assembly checkpoint" evidence=IMP] [GO:0033316 "meiotic
spindle assembly checkpoint" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0007067
GO:GO:0007094 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00530000063440 HOGENOM:HOG000208822 KO:K02180
OMA:NAISFHS EMBL:AL032648 PIR:T27185 RefSeq:NP_496879.1
ProteinModelPortal:Q9XWH0 SMR:Q9XWH0 DIP:DIP-26143N IntAct:Q9XWH0
MINT:MINT-1052446 STRING:Q9XWH0 PaxDb:Q9XWH0
EnsemblMetazoa:Y54G9A.6 GeneID:175018 KEGG:cel:CELE_Y54G9A.6
UCSC:Y54G9A.6 CTD:175018 WormBase:Y54G9A.6 InParanoid:Q9XWH0
NextBio:886426 GO:GO:0033316 Uniprot:Q9XWH0
Length = 343
Score = 169 (64.5 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 34/83 (40%), Positives = 50/83 (60%)
Query: 2 FRCH-PKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNS 60
F+CH K DG + PV+ V F P G F TG +G V WD +R+R+ +L +F S
Sbjct: 237 FKCHREKDTDGTELIHPVHTVAFHP-KYGTFATGGADGIVNIWDPFNRKRIIQLHKFETS 295
Query: 61 VASLSYNHGGQLLAVASSCTYQE 83
++SLS+N G LA+A+S Y++
Sbjct: 296 ISSLSFNEDGSQLAIATSYQYEK 318
>UNIPROTKB|Q9XWH0 [details] [associations]
symbol:bub-3 "Protein BUB-3" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009792 GO:GO:0007067 GO:GO:0007094 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00530000063440
HOGENOM:HOG000208822 KO:K02180 OMA:NAISFHS EMBL:AL032648 PIR:T27185
RefSeq:NP_496879.1 ProteinModelPortal:Q9XWH0 SMR:Q9XWH0
DIP:DIP-26143N IntAct:Q9XWH0 MINT:MINT-1052446 STRING:Q9XWH0
PaxDb:Q9XWH0 EnsemblMetazoa:Y54G9A.6 GeneID:175018
KEGG:cel:CELE_Y54G9A.6 UCSC:Y54G9A.6 CTD:175018 WormBase:Y54G9A.6
InParanoid:Q9XWH0 NextBio:886426 GO:GO:0033316 Uniprot:Q9XWH0
Length = 343
Score = 169 (64.5 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 34/83 (40%), Positives = 50/83 (60%)
Query: 2 FRCH-PKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNS 60
F+CH K DG + PV+ V F P G F TG +G V WD +R+R+ +L +F S
Sbjct: 237 FKCHREKDTDGTELIHPVHTVAFHP-KYGTFATGGADGIVNIWDPFNRKRIIQLHKFETS 295
Query: 61 VASLSYNHGGQLLAVASSCTYQE 83
++SLS+N G LA+A+S Y++
Sbjct: 296 ISSLSFNEDGSQLAIATSYQYEK 318
>DICTYBASE|DDB_G0292134 [details] [associations]
symbol:bub3 "putative mitotic checkpoint protein"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0000776 "kinetochore"
evidence=ISS] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0292134 GO:GO:0005634
GenomeReviews:CM000155_GR GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000187 eggNOG:COG2319 KO:K02180
OMA:NAISFHS RefSeq:XP_629851.1 HSSP:P26449
ProteinModelPortal:Q54DM1 STRING:Q54DM1 EnsemblProtists:DDB0233126
GeneID:8628531 KEGG:ddi:DDB_G0292134 ProtClustDB:CLSZ2429485
Uniprot:Q54DM1
Length = 331
Score = 166 (63.5 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 35/90 (38%), Positives = 53/90 (58%)
Query: 2 FRCHPKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSV 61
F+CH ++ G + PVN + F+P G F TG + V WD +R+RL L + S+
Sbjct: 226 FKCHRLTESGVDVVYPVNCIAFNP-HYGTFATGGCDKNVFFWDGANRKRLHALKTYPTSI 284
Query: 62 ASLSYNHGGQLLAVASSCTYQEATVIEEPP 91
+S+S+N G +LAVASS T++E + PP
Sbjct: 285 SSMSFNTDGNILAVASSYTFEEGEK-DHPP 313
>ZFIN|ZDB-GENE-041010-210 [details] [associations]
symbol:bub3 "BUB3 budding uninhibited by
benzimidazoles 3 homolog (yeast)" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-041010-210
Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 CTD:9184 GeneTree:ENSGT00530000063440
HOVERGEN:HBG002942 KO:K02180 OMA:NAISFHS EMBL:CU694280
EMBL:AY391411 IPI:IPI00488477 RefSeq:NP_991272.1 UniGene:Dr.78635
STRING:Q6TNV6 Ensembl:ENSDART00000130726 GeneID:403012
KEGG:dre:403012 NextBio:20816819 Uniprot:Q6TNV6
Length = 326
Score = 159 (61.0 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 33/89 (37%), Positives = 53/89 (59%)
Query: 2 FRCHPKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSV 61
F+CH ++G + PVN + F + F TG ++G+V WD +++RL + R+ +S+
Sbjct: 221 FKCHRLKENGIEQVYPVNAISFHSV-HNTFATGGSDGFVNIWDPFNKKRLCQFHRYPSSI 279
Query: 62 ASLSYNHGGQLLAVASSCTYQEATVIEEP 90
ASLS++ G LLA+ASS QE + P
Sbjct: 280 ASLSFSTDGSLLAIASSYM-QELGDVSHP 307
>ASPGD|ASPL0000047688 [details] [associations]
symbol:sldB species:162425 "Emericella nidulans"
[GO:0007094 "mitotic spindle assembly checkpoint" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0034613 "cellular
protein localization" evidence=IEA] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
EMBL:BN001307 HOGENOM:HOG000208822 OMA:NAISFHS
ProteinModelPortal:C8VP05 EnsemblFungi:CADANIAT00009151
Uniprot:C8VP05
Length = 357
Score = 156 (60.0 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 28/82 (34%), Positives = 52/82 (63%)
Query: 2 FRCHPKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSV 61
F+CH ++ D + PVN + F P+ G F +G +G VA WD ++RR+ + ++ +SV
Sbjct: 249 FKCHRQTSDDVDVVYPVNSLAFHPI-HGTFASGGGDGVVALWDGIAKRRIRQYQKYPSSV 307
Query: 62 ASLSYNHGGQLLAVASSCTYQE 83
A+++++ G+ LA+A S Y++
Sbjct: 308 AAVAFSSNGKYLAIAISPGYED 329
>UNIPROTKB|B4DDM6 [details] [associations]
symbol:BUB3 "cDNA FLJ57899, highly similar to Mitotic
checkpoint protein BUB3" species:9606 "Homo sapiens" [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0051983
"regulation of chromosome segregation" evidence=IEA] [GO:0071173
"spindle assembly checkpoint" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000070 EMBL:AC012391 GO:GO:0051983
GO:GO:0071173 HOVERGEN:HBG002942 UniGene:Hs.418533 HGNC:HGNC:1151
ChiTaRS:Bub3 EMBL:AK293255 IPI:IPI01010654 SMR:B4DDM6 STRING:B4DDM6
Ensembl:ENST00000538238 Uniprot:B4DDM6
Length = 248
Score = 151 (58.2 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 28/81 (34%), Positives = 49/81 (60%)
Query: 2 FRCHPKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSV 61
F+CH ++ + PVN + F + F TG ++G+V WD +++RL + R+ S+
Sbjct: 141 FKCHRLKENNIEQIYPVNAISFHNI-HNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSI 199
Query: 62 ASLSYNHGGQLLAVASSCTYQ 82
ASL++++ G LA+ASS Y+
Sbjct: 200 ASLAFSNDGTTLAIASSYMYE 220
>UNIPROTKB|Q5ZHW3 [details] [associations]
symbol:BUB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008608 "attachment of spindle
microtubules to kinetochore" evidence=IEA] [GO:0051983 "regulation
of chromosome segregation" evidence=IEA] [GO:0071173 "spindle
assembly checkpoint" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000070 GO:GO:0008608
GO:GO:0051983 GO:GO:0071173 CTD:9184 GeneTree:ENSGT00530000063440
HOGENOM:HOG000208822 HOVERGEN:HBG002942 KO:K02180 OMA:NAISFHS
EMBL:AADN02078913 EMBL:AADN02078914 EMBL:AADN02078915
EMBL:AADN02078916 EMBL:AADN02078917 EMBL:AJ721021 IPI:IPI00587104
RefSeq:NP_001006506.1 UniGene:Gga.4735 STRING:Q5ZHW3
Ensembl:ENSGALT00000015758 Ensembl:ENSGALT00000032994 GeneID:423949
KEGG:gga:423949 InParanoid:Q5ZHW3 NextBio:20826345 Uniprot:Q5ZHW3
Length = 329
Score = 155 (59.6 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 32/89 (35%), Positives = 52/89 (58%)
Query: 2 FRCHPKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSV 61
F+CH ++ + PVN + F + F TG ++G+V WD +++RL + R+ S+
Sbjct: 224 FKCHRLKENNIEQIYPVNAISFHNV-HNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSI 282
Query: 62 ASLSYNHGGQLLAVASSCTYQEATVIEEP 90
ASL++++ G LA+ASS Y E IE P
Sbjct: 283 ASLAFSNDGTTLAIASSYMY-EMDDIEHP 310
>UNIPROTKB|Q1JQB2 [details] [associations]
symbol:BUB3 "Mitotic checkpoint protein BUB3" species:9913
"Bos taurus" [GO:0051983 "regulation of chromosome segregation"
evidence=ISS] [GO:0071173 "spindle assembly checkpoint"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000777
"condensed chromosome kinetochore" evidence=IEA] [GO:0008608
"attachment of spindle microtubules to kinetochore" evidence=IEA]
[GO:0000070 "mitotic sister chromatid segregation" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0007126 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000070 GO:GO:0008608
GO:GO:0051983 GO:GO:0000777 GO:GO:0071173 EMBL:BT030579
EMBL:BC116090 IPI:IPI00701223 RefSeq:NP_001069645.1
UniGene:Bt.26981 ProteinModelPortal:Q1JQB2 SMR:Q1JQB2 STRING:Q1JQB2
PRIDE:Q1JQB2 Ensembl:ENSBTAT00000057027 GeneID:539594
KEGG:bta:539594 CTD:9184 GeneTree:ENSGT00530000063440
HOGENOM:HOG000208822 HOVERGEN:HBG002942 KO:K02180 OMA:NAISFHS
OrthoDB:EOG4R7VB2 NextBio:20878093 ArrayExpress:Q1JQB2
Uniprot:Q1JQB2
Length = 326
Score = 151 (58.2 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 28/81 (34%), Positives = 49/81 (60%)
Query: 2 FRCHPKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSV 61
F+CH ++ + PVN + F + F TG ++G+V WD +++RL + R+ S+
Sbjct: 221 FKCHRLKENNIEQIYPVNAISFHNI-HNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSI 279
Query: 62 ASLSYNHGGQLLAVASSCTYQ 82
ASL++++ G LA+ASS Y+
Sbjct: 280 ASLAFSNDGTTLAIASSYMYE 300
>MGI|MGI:1343463 [details] [associations]
symbol:Bub3 "budding uninhibited by benzimidazoles 3 homolog
(S. cerevisiae)" species:10090 "Mus musculus" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0000776
"kinetochore" evidence=ISO] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=IMP]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0008608 "attachment of spindle microtubules to
kinetochore" evidence=ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051983 "regulation of chromosome segregation"
evidence=IDA] [GO:0071173 "spindle assembly checkpoint"
evidence=ISO;IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1343463 GO:GO:0005634 GO:GO:0007126
GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000070
GO:GO:0008608 GO:GO:0051983 GO:GO:0000777 GO:GO:0071173 CTD:9184
GeneTree:ENSGT00530000063440 HOGENOM:HOG000208822
HOVERGEN:HBG002942 KO:K02180 OMA:NAISFHS OrthoDB:EOG4R7VB2
EMBL:AF149822 EMBL:U67327 EMBL:AK088534 EMBL:BC025089
IPI:IPI00626752 RefSeq:NP_033904.2 UniGene:Mm.441749 UniGene:Mm.927
ProteinModelPortal:Q9WVA3 SMR:Q9WVA3 IntAct:Q9WVA3 STRING:Q9WVA3
PhosphoSite:Q9WVA3 REPRODUCTION-2DPAGE:Q9WVA3 PaxDb:Q9WVA3
PRIDE:Q9WVA3 Ensembl:ENSMUST00000084502 GeneID:12237 KEGG:mmu:12237
InParanoid:Q6ZWM5 NextBio:280670 Bgee:Q9WVA3 Genevestigator:Q9WVA3
GermOnline:ENSMUSG00000066979 Uniprot:Q9WVA3
Length = 326
Score = 151 (58.2 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 28/81 (34%), Positives = 49/81 (60%)
Query: 2 FRCHPKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSV 61
F+CH ++ + PVN + F + F TG ++G+V WD +++RL + R+ S+
Sbjct: 221 FKCHRLKENNIEQIYPVNAISFHNI-HNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSI 279
Query: 62 ASLSYNHGGQLLAVASSCTYQ 82
ASL++++ G LA+ASS Y+
Sbjct: 280 ASLAFSNDGTTLAIASSYMYE 300
>UNIPROTKB|O43684 [details] [associations]
symbol:BUB3 "Mitotic checkpoint protein BUB3" species:9606
"Homo sapiens" [GO:0007126 "meiosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0051983 "regulation of chromosome
segregation" evidence=IEA] [GO:0000777 "condensed chromosome
kinetochore" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0071173 "spindle assembly checkpoint"
evidence=IDA] [GO:0008608 "attachment of spindle microtubules to
kinetochore" evidence=IDA] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000087 "M
phase of mitotic cell cycle" evidence=TAS] [GO:0000236 "mitotic
prometaphase" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0007094
"mitotic spindle assembly checkpoint" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051439
"regulation of ubiquitin-protein ligase activity involved in
mitotic cell cycle" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_6850 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0005634 GO:GO:0007126
Reactome:REACT_115566 Reactome:REACT_21300 GO:GO:0000776
GO:GO:0051301 GO:GO:0007094 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 EMBL:CH471066 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000070 EMBL:AC012391 GO:GO:0051436
GO:GO:0008608 Reactome:REACT_8017 GO:GO:0031145 GO:GO:0000236
GO:GO:0051983 GO:GO:0000777 CTD:9184 HOGENOM:HOG000208822
HOVERGEN:HBG002942 KO:K02180 OMA:NAISFHS OrthoDB:EOG4R7VB2
EMBL:AF047472 EMBL:AF047473 EMBL:AF053304 EMBL:AF081496
EMBL:AK312546 EMBL:BC005138 EMBL:BC022438 IPI:IPI00013468
IPI:IPI00514701 RefSeq:NP_001007794.1 RefSeq:NP_004716.1
UniGene:Hs.418533 ProteinModelPortal:O43684 SMR:O43684
DIP:DIP-24205N IntAct:O43684 MINT:MINT-5005850 STRING:O43684
PhosphoSite:O43684 PaxDb:O43684 PRIDE:O43684 DNASU:9184
Ensembl:ENST00000368858 Ensembl:ENST00000368865 GeneID:9184
KEGG:hsa:9184 UCSC:uc001lhd.2 UCSC:uc001lhe.2 GeneCards:GC10P124903
HGNC:HGNC:1151 HPA:HPA003601 MIM:603719 neXtProt:NX_O43684
PharmGKB:PA25467 InParanoid:O43684 PhylomeDB:O43684 ChiTaRS:Bub3
GenomeRNAi:9184 NextBio:34433 ArrayExpress:O43684 Bgee:O43684
CleanEx:HS_BUB3 Genevestigator:O43684 GermOnline:ENSG00000154473
Uniprot:O43684
Length = 328
Score = 151 (58.2 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 28/81 (34%), Positives = 49/81 (60%)
Query: 2 FRCHPKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSV 61
F+CH ++ + PVN + F + F TG ++G+V WD +++RL + R+ S+
Sbjct: 221 FKCHRLKENNIEQIYPVNAISFHNI-HNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSI 279
Query: 62 ASLSYNHGGQLLAVASSCTYQ 82
ASL++++ G LA+ASS Y+
Sbjct: 280 ASLAFSNDGTTLAIASSYMYE 300
>UNIPROTKB|F2Z5F3 [details] [associations]
symbol:BUB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071173 "spindle assembly checkpoint" evidence=IEA]
[GO:0051983 "regulation of chromosome segregation" evidence=IEA]
[GO:0008608 "attachment of spindle microtubules to kinetochore"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000776
"kinetochore" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000070
GO:GO:0008608 GO:GO:0051983 GO:GO:0071173 CTD:9184
GeneTree:ENSGT00530000063440 KO:K02180 OMA:NAISFHS EMBL:CU468341
RefSeq:XP_003359438.1 UniGene:Ssc.9930 ProteinModelPortal:F2Z5F3
SMR:F2Z5F3 IntAct:F2Z5F3 PRIDE:F2Z5F3 Ensembl:ENSSSCT00000011737
GeneID:100156053 KEGG:ssc:100156053 Uniprot:F2Z5F3
Length = 328
Score = 151 (58.2 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 28/81 (34%), Positives = 49/81 (60%)
Query: 2 FRCHPKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSV 61
F+CH ++ + PVN + F + F TG ++G+V WD +++RL + R+ S+
Sbjct: 221 FKCHRLKENNIEQIYPVNAISFHNI-HNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSI 279
Query: 62 ASLSYNHGGQLLAVASSCTYQ 82
ASL++++ G LA+ASS Y+
Sbjct: 280 ASLAFSNDGTTLAIASSYMYE 300
>UNIPROTKB|Q5RB58 [details] [associations]
symbol:BUB3 "Mitotic checkpoint protein BUB3" species:9601
"Pongo abelii" [GO:0051983 "regulation of chromosome segregation"
evidence=ISS] [GO:0071173 "spindle assembly checkpoint"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0007126 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051983
GO:GO:0000777 GO:GO:0071173 CTD:9184 HOVERGEN:HBG002942 KO:K02180
EMBL:CR858797 RefSeq:NP_001125579.1 UniGene:Pab.19158
ProteinModelPortal:Q5RB58 GeneID:100172494 KEGG:pon:100172494
InParanoid:Q5RB58 Uniprot:Q5RB58
Length = 328
Score = 151 (58.2 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 28/81 (34%), Positives = 49/81 (60%)
Query: 2 FRCHPKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSV 61
F+CH ++ + PVN + F + F TG ++G+V WD +++RL + R+ S+
Sbjct: 221 FKCHRLKENNIEQIYPVNAISFHNI-HNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSI 279
Query: 62 ASLSYNHGGQLLAVASSCTYQ 82
ASL++++ G LA+ASS Y+
Sbjct: 280 ASLAFSNDGTTLAIASSYMYE 300
>POMBASE|SPAC23H3.08c [details] [associations]
symbol:bub3 "mitotic spindle checkpoint protein Bub3"
species:4896 "Schizosaccharomyces pombe" [GO:0000778 "condensed
nuclear chromosome kinetochore" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0007094 "mitotic spindle assembly
checkpoint" evidence=IMP] [GO:0033597 "mitotic checkpoint complex"
evidence=ISO] [GO:0034613 "cellular protein localization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC23H3.08c EMBL:CU329670 GO:GO:0034613
GO:GO:0051301 GO:GO:0007067 GenomeReviews:CU329670_GR GO:GO:0007094
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000778 HOGENOM:HOG000208822 KO:K02180
OMA:NAISFHS PIR:T38301 RefSeq:NP_593798.1 ProteinModelPortal:O42860
IntAct:O42860 STRING:O42860 EnsemblFungi:SPAC23H3.08c.1
GeneID:2541856 KEGG:spo:SPAC23H3.08c eggNOG:NOG330182
OrthoDB:EOG4XKZH8 NextBio:20802944 GO:GO:0033597 Uniprot:O42860
Length = 320
Score = 138 (53.6 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 2 FRCHPKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSV 61
F+CH + + + PVND+ F P+ + T +G VA WD Q R+RL L ++
Sbjct: 220 FKCHRQIQKDYDIVYPVNDLKFHPIHQ-TLATAGGDGVVAFWDIQVRKRLRVLNPSKINI 278
Query: 62 ASLSYNHGGQLLAVASSCTYQEA 84
+S+S+N G +LA+A+ C +EA
Sbjct: 279 SSISFNVDGSMLAIAT-CAQEEA 300
>FB|FBgn0025457 [details] [associations]
symbol:Bub3 "Bub3" species:7227 "Drosophila melanogaster"
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000776 "kinetochore"
evidence=IDA] [GO:0007093 "mitotic cell cycle checkpoint"
evidence=NAS] [GO:0007094 "mitotic spindle assembly checkpoint"
evidence=IDA] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005875 GO:GO:0005654 GO:GO:0000776
GO:GO:0007052 GO:GO:0007094 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AF075594 EMBL:AF088846
IntAct:O76523 STRING:O76523 FlyBase:FBgn0025457 InParanoid:O76523
OrthoDB:EOG4M9072 Uniprot:O76523
Length = 327
Score = 121 (47.7 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 2 FRCHPKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSV 61
F+CH + + PVN + F + + F TG ++G V WD +++RL + + S+
Sbjct: 222 FKCHRNREQNIEQIYPVNALSFHNVYQ-TFATGGSDGIVNIWDGFNKKRLCQFHEYDTSI 280
Query: 62 ASLSYNHGGQLLAVASSCTY 81
++L+++ G LA+ C+Y
Sbjct: 281 STLNFSSDGSALAIG--CSY 298
>SGD|S000000909 [details] [associations]
symbol:GLE2 "RNA export factor associated with the nuclear
pore complex (NPC)" species:4932 "Saccharomyces cerevisiae"
[GO:0005643 "nuclear pore" evidence=IEA;IDA] [GO:0016021 "integral
to membrane" evidence=ISM] [GO:0000973 "posttranscriptional
tethering of RNA polymerase II gene DNA at nuclear periphery"
evidence=IMP] [GO:0000972 "transcription-dependent tethering of RNA
polymerase II gene DNA at nuclear periphery" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031081
"nuclear pore distribution" evidence=IMP] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:2000728
"regulation of mRNA export from nucleus in response to heat stress"
evidence=IMP] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016973 "poly(A)+ mRNA
export from nucleus" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000909 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0015031
GO:GO:0031965 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005643 EMBL:BK006939 EMBL:U18839
GeneTree:ENSGT00530000063440 TCDB:9.A.14.1.1 GO:GO:0016973
EMBL:AY692884 PIR:S50610 RefSeq:NP_011033.3 RefSeq:NP_011037.3
ProteinModelPortal:P40066 SMR:P40066 DIP:DIP-2452N IntAct:P40066
MINT:MINT-483363 STRING:P40066 PaxDb:P40066 PeptideAtlas:P40066
EnsemblFungi:YER107C GeneID:856844 GeneID:856848 KEGG:sce:YER107C
KEGG:sce:YER112W CYGD:YER107c HOGENOM:HOG000208823 KO:K12623
KO:K14298 OMA:RCITCAP OrthoDB:EOG4C5GT5 NextBio:983165
Genevestigator:P40066 GermOnline:YER107C GO:GO:0031081
GO:GO:0000973 GO:GO:2000728 Uniprot:P40066
Length = 365
Score = 117 (46.2 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 31/96 (32%), Positives = 42/96 (43%)
Query: 2 FRCHPKSKDGR------HHLV-PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFEL 54
F+CH ++ R LV PVN + F PL G FVT +G WD R RL
Sbjct: 249 FKCHRQTNPNRAPGSNGQSLVYPVNSIAFHPLY-GTFVTAGGDGTFNFWDKNQRHRLKGY 307
Query: 55 PRFSNSVASLSYNHGGQLLAVASSCTYQEATVIEEP 90
P S+ S+N G + A A S + + + P
Sbjct: 308 PTLQASIPVCSFNRNGSVFAYALSYDWHQGHMGNRP 343
>TAIR|locus:2025732 [details] [associations]
symbol:RAE1 "AT1G80670" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AC011713 EMBL:U53501
GO:GO:0080008 HOGENOM:HOG000208823 KO:K14298 OMA:RVAIQYV
EMBL:AY087683 IPI:IPI00547787 PIR:A96839 PIR:S71241
RefSeq:NP_178182.1 UniGene:At.24472 ProteinModelPortal:Q38942
SMR:Q38942 IntAct:Q38942 STRING:Q38942 PaxDb:Q38942 PRIDE:Q38942
EnsemblPlants:AT1G80670.1 GeneID:844406 KEGG:ath:AT1G80670
GeneFarm:2856 TAIR:At1g80670 InParanoid:Q38942 PhylomeDB:Q38942
ProtClustDB:CLSN2681924 Genevestigator:Q38942 GermOnline:AT1G80670
Uniprot:Q38942
Length = 349
Score = 114 (45.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 26/89 (29%), Positives = 44/89 (49%)
Query: 2 FRCHPKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSV 61
F+CH +DG + + VN + F P+ G F T ++G WD S++RL + R + +
Sbjct: 237 FKCH---RDG-NDIYSVNSLNFHPV-HGTFATAGSDGAFNFWDKDSKQRLKAMSRCNQPI 291
Query: 62 ASLSYNHGGQLLAVASSCTYQEATVIEEP 90
S+NH G + A A+ + + P
Sbjct: 292 PCSSFNHDGSIYAYAACYDWSKGAENHNP 320
>UNIPROTKB|G4N5H8 [details] [associations]
symbol:MGG_06111 "Mitotic checkpoint protein BUB3"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CM001233 KO:K02180
RefSeq:XP_003711978.1 ProteinModelPortal:G4N5H8
EnsemblFungi:MGG_06111T0 GeneID:2684287 KEGG:mgr:MGG_06111
Uniprot:G4N5H8
Length = 352
Score = 114 (45.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 30/89 (33%), Positives = 49/89 (55%)
Query: 2 FRCH--PKSKDGRHHLV-PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFS 58
F+CH P KD L+ PV+ + F P FV+G +G VA WD++++RR+ P
Sbjct: 237 FKCHRGPDPKDPDTELIYPVDSLAFHP-EYLTFVSGGGDGQVALWDSEAKRRMKIYPMNG 295
Query: 59 NSVA-SLSYNHGGQLLAVASSCTYQEATV 86
A +L+++ G+ LA+ + C E T+
Sbjct: 296 GLAARTLAFSADGRFLAIGT-CPGFEDTM 323
>UNIPROTKB|G4NDD2 [details] [associations]
symbol:MGG_00946 "Poly(A)+ RNA export protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 EMBL:CM001235 GO:GO:0005643 GO:GO:0016973 KO:K14298
GO:GO:0031081 GO:GO:0000973 GO:GO:2000728 RefSeq:XP_003718005.1
ProteinModelPortal:G4NDD2 EnsemblFungi:MGG_00946T0 GeneID:2674766
KEGG:mgr:MGG_00946 Uniprot:G4NDD2
Length = 358
Score = 112 (44.5 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 25/78 (32%), Positives = 38/78 (48%)
Query: 2 FRCHPKSKDGRHHLV-PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNS 60
F+CH + G V VND+ F P+ G F T ++G WD ++ RL P S
Sbjct: 245 FKCHRDAPQGSVTSVHAVNDISFHPV-HGTFSTAGSDGTFHFWDKDAKHRLKGYPNVGGS 303
Query: 61 VASLSYNHGGQLLAVASS 78
+ + ++N G + A A S
Sbjct: 304 ITATTFNKNGNIFAYAVS 321
>POMBASE|SPBC16A3.05c [details] [associations]
symbol:rae1 "RNA export factor, nucleoporin Rae1"
species:4896 "Schizosaccharomyces pombe" [GO:0000054 "ribosomal
subunit export from nucleus" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005643 "nuclear pore" evidence=ISO;IDA] [GO:0006606 "protein
import into nucleus" evidence=TAS] [GO:0010389 "regulation of G2/M
transition of mitotic cell cycle" evidence=IMP] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IMP] [GO:0007094
"mitotic spindle assembly checkpoint" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC16A3.05c Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005643 GenomeReviews:CU329671_GR
GO:GO:0006606 GO:GO:0010389 GO:GO:0016973 HOGENOM:HOG000208823
KO:K14298 OMA:RCITCAP OrthoDB:EOG4C5GT5 GO:GO:0000054 EMBL:U14951
PIR:A56119 RefSeq:NP_596784.1 ProteinModelPortal:P41838
DIP:DIP-59117N STRING:P41838 PRIDE:P41838
EnsemblFungi:SPBC16A3.05c.1 GeneID:2539741 KEGG:spo:SPBC16A3.05c
NextBio:20800892 Uniprot:P41838
Length = 352
Score = 111 (44.1 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 23/77 (29%), Positives = 35/77 (45%)
Query: 2 FRCHPKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSV 61
FRCH + VN + F P G F T ++G + WD S +RL P ++
Sbjct: 241 FRCHRNQAGNSADVYSVNSIAFHP-QYGTFSTAGSDGTFSFWDKDSHQRLKSYPNVGGTI 299
Query: 62 ASLSYNHGGQLLAVASS 78
+ ++N G + A A S
Sbjct: 300 SCSTFNRTGDIFAYAIS 316
>CGD|CAL0001281 [details] [associations]
symbol:orf19.1095 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0031081
"nuclear pore distribution" evidence=IEA] [GO:0016973 "poly(A)+
mRNA export from nucleus" evidence=IEA] [GO:0010389 "regulation of
G2/M transition of mitotic cell cycle" evidence=IEA] [GO:2000728
"regulation of mRNA export from nucleus in response to heat stress"
evidence=IEA] [GO:0000973 "posttranscriptional tethering of RNA
polymerase II gene DNA at nuclear periphery" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0001281 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000168
EMBL:AACQ01000169 KO:K14298 RefSeq:XP_712083.1 RefSeq:XP_712107.1
ProteinModelPortal:Q59QW3 STRING:Q59QW3 GeneID:3646293
GeneID:3646319 KEGG:cal:CaO19.1095 KEGG:cal:CaO19.8697
Uniprot:Q59QW3
Length = 383
Score = 97 (39.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 21/76 (27%), Positives = 35/76 (46%)
Query: 3 RCHPKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVA 62
R S H VN + F P+ G F T ++G WD +++RL P +++
Sbjct: 275 RTTSSSNANESHAYSVNAISFHPIY-GTFSTAGSDGTFCFWDKDAKQRLKSFPELPGAIS 333
Query: 63 SLSYNHGGQLLAVASS 78
+ ++N G + A A S
Sbjct: 334 ATAFNKTGTIFAYAIS 349
Score = 32 (16.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 5/7 (71%), Positives = 6/7 (85%)
Query: 2 FRCHPKS 8
F+CH KS
Sbjct: 250 FKCHRKS 256
>UNIPROTKB|Q59QW3 [details] [associations]
symbol:GLE2 "Likely WD40 repeat nuclear pore protein Gle2p"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001281 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000168 EMBL:AACQ01000169 KO:K14298 RefSeq:XP_712083.1
RefSeq:XP_712107.1 ProteinModelPortal:Q59QW3 STRING:Q59QW3
GeneID:3646293 GeneID:3646319 KEGG:cal:CaO19.1095
KEGG:cal:CaO19.8697 Uniprot:Q59QW3
Length = 383
Score = 97 (39.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 21/76 (27%), Positives = 35/76 (46%)
Query: 3 RCHPKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVA 62
R S H VN + F P+ G F T ++G WD +++RL P +++
Sbjct: 275 RTTSSSNANESHAYSVNAISFHPIY-GTFSTAGSDGTFCFWDKDAKQRLKSFPELPGAIS 333
Query: 63 SLSYNHGGQLLAVASS 78
+ ++N G + A A S
Sbjct: 334 ATAFNKTGTIFAYAIS 349
Score = 32 (16.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 5/7 (71%), Positives = 6/7 (85%)
Query: 2 FRCHPKS 8
F+CH KS
Sbjct: 250 FKCHRKS 256
>FB|FBgn0034646 [details] [associations]
symbol:Rae1 "Rae1" species:7227 "Drosophila melanogaster"
[GO:2000045 "regulation of G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0051297
"centrosome organization" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045886 "negative regulation of synaptic growth at
neuromuscular junction" evidence=IMP] [GO:0010506 "regulation of
autophagy" evidence=IMP] [GO:0005643 "nuclear pore" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005635 GO:GO:0051297 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:2000045 EMBL:AY118568
UniGene:Dm.11463 ProteinModelPortal:Q7JVX4 STRING:Q7JVX4
PaxDb:Q7JVX4 PRIDE:Q7JVX4 FlyBase:FBgn0034646 InParanoid:Q7JVX4
OrthoDB:EOG42NGFW ArrayExpress:Q7JVX4 Bgee:Q7JVX4 Uniprot:Q7JVX4
Length = 360
Score = 108 (43.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 23/76 (30%), Positives = 36/76 (47%)
Query: 2 FRCHPKS-KDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNS 60
F+CH + G + VND+ F P+ G VT ++G + WD +R +L S
Sbjct: 252 FKCHRTTGTSGYQDIYAVNDIAFHPV-HGTLVTVGSDGTFSFWDKDARTKLKSSETMDQS 310
Query: 61 VASLSYNHGGQLLAVA 76
+ +N GQ+ A A
Sbjct: 311 ITKCGFNANGQIFAYA 326
>CGD|CAL0003474 [details] [associations]
symbol:BUB3 species:5476 "Candida albicans" [GO:0043130
"ubiquitin binding" evidence=IEA] [GO:0033597 "mitotic checkpoint
complex" evidence=IEA] [GO:0000778 "condensed nuclear chromosome
kinetochore" evidence=IEA] [GO:0044774 "mitotic DNA integrity
checkpoint" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 SMART:SM00320
CGD:CAL0003474 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 KO:K02180 eggNOG:NOG330182 EMBL:AACQ01000171
EMBL:AACQ01000170 RefSeq:XP_712037.1 RefSeq:XP_712058.1
STRING:Q59QR8 GeneID:3646341 GeneID:3646362 KEGG:cal:CaO19.10178
KEGG:cal:CaO19.2655 Uniprot:Q59QR8
Length = 373
Score = 108 (43.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 27/87 (31%), Positives = 42/87 (48%)
Query: 2 FRCH----PKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRF 57
F+CH P + + PVN + F+ G T ++GYV WD + R+R+ + PRF
Sbjct: 252 FKCHRHPDPNPESAGDLVYPVNSLDFNH-KYGTLFTAGSDGYVCLWDCKKRKRMRQYPRF 310
Query: 58 SN------SVASLSYNHGGQLLAVASS 78
+ S+ L N L+ VA+S
Sbjct: 311 LSAENEPESIVKLKINRQDNLMVVATS 337
>RGD|1311540 [details] [associations]
symbol:Rae1 "RAE1 RNA export 1 homolog (S. pombe)" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0071407 "cellular response to organic
cyclic compound" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1311540 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00530000063440 HOVERGEN:HBG002942
HOGENOM:HOG000208823 KO:K14298 OMA:RVAIQYV CTD:8480
OrthoDB:EOG4XD3R8 EMBL:BC104721 EMBL:BC105758 IPI:IPI00357999
RefSeq:NP_001028880.1 UniGene:Rn.14600 ProteinModelPortal:Q3SWS8
STRING:Q3SWS8 PRIDE:Q3SWS8 Ensembl:ENSRNOT00000038182 GeneID:362281
KEGG:rno:362281 UCSC:RGD:1311540 InParanoid:Q3SWS8 NextBio:679325
Genevestigator:Q3SWS8 GermOnline:ENSRNOG00000021295 Uniprot:Q3SWS8
Length = 368
Score = 104 (41.7 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 24/92 (26%), Positives = 40/92 (43%)
Query: 2 FRCHPKS---KDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFS 58
F+CH + + VN + F P+ G T ++G + WD +R +L +
Sbjct: 257 FKCHRSNGTNTSAPQDIYAVNGIAFHPV-HGTLATVGSDGRFSFWDKDARTKLKTSEQLD 315
Query: 59 NSVASLSYNHGGQLLAVASSCTYQEATVIEEP 90
VA+ +NH G + A ASS + + P
Sbjct: 316 QPVAACGFNHNGNIFAYASSYDWSKGHEFYNP 347
>DICTYBASE|DDB_G0283835 [details] [associations]
symbol:rae1 "putative mRNA export protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0016973 "poly(A)+ mRNA export from
nucleus" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0283835 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003723 EMBL:AAFI02000057 GO:GO:0016973 KO:K14298 OMA:RVAIQYV
RefSeq:XP_638901.1 ProteinModelPortal:Q54QH0 STRING:Q54QH0
PRIDE:Q54QH0 EnsemblProtists:DDB0237902 GeneID:8624298
KEGG:ddi:DDB_G0283835 Uniprot:Q54QH0
Length = 342
Score = 103 (41.3 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 24/89 (26%), Positives = 47/89 (52%)
Query: 2 FRCHPKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSV 61
F+CH ++ + VN++ F+ L G F T ++G + WD +S+ RL + + S+
Sbjct: 233 FKCHRENDTVAY---AVNNISFA-LPYGTFATAGSDGGFSFWDKESKFRLKQFSKLPQSI 288
Query: 62 ASLSYNHGGQLLAVASSCTYQEATVIEEP 90
++ ++N L A ASS + + + +P
Sbjct: 289 STATFNLDASLYAYASSYDWSKGSQYFDP 317
>ASPGD|ASPL0000060741 [details] [associations]
symbol:sonA species:162425 "Emericella nidulans"
[GO:0034399 "nuclear periphery" evidence=IDA] [GO:0005643 "nuclear
pore" evidence=ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA]
[GO:0010389 "regulation of G2/M transition of mitotic cell cycle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:BN001308
EMBL:AACD01000019 HOGENOM:HOG000208823 KO:K14298 OMA:RVAIQYV
RefSeq:XP_658983.1 ProteinModelPortal:G5EAY9
EnsemblFungi:CADANIAT00001229 GeneID:2877155 KEGG:ani:AN1379.2
Uniprot:G5EAY9
Length = 362
Score = 103 (41.3 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 24/92 (26%), Positives = 43/92 (46%)
Query: 2 FRCH---PKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFS 58
F+CH P ++ +++ VN + F P+ G F T +G WD ++ RL P
Sbjct: 247 FKCHRETPPNQRDINNIYSVNAISFHPV-HGTFSTAGADGTFHFWDKDAKHRLKGYPSVG 305
Query: 59 NSVASLSYNHGGQLLAVASSCTYQEATVIEEP 90
+++S ++N G + A A S + + P
Sbjct: 306 GTISSTAFNRTGNIFAYAVSYDWSKGYSANTP 337
>UNIPROTKB|Q7ZZY7 [details] [associations]
symbol:Rae1/Gle2 "Rae1/Gle2" species:8355 "Xenopus laevis"
[GO:0005515 "protein binding" evidence=IPI] [GO:0008017
"microtubule binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008017 HOVERGEN:HBG002942 EMBL:BC077196
EMBL:AY256464 RefSeq:NP_001083956.1 UniGene:Xl.56581 IntAct:Q7ZZY7
GeneID:399210 KEGG:xla:399210 CTD:399210 Uniprot:Q7ZZY7
Length = 368
Score = 102 (41.0 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 24/94 (25%), Positives = 42/94 (44%)
Query: 2 FRCHPKSKDGRHHLVP-----VNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPR 56
F+CH +G + P VND+ F P+ G T ++G + WD +R +L +
Sbjct: 257 FKCH--RSNGTNTAAPQDIYAVNDIAFHPV-HGTLATVGSDGRFSFWDKDARTKLKTSEQ 313
Query: 57 FSNSVASLSYNHGGQLLAVASSCTYQEATVIEEP 90
+ + +NH G + A +SS + + P
Sbjct: 314 LDQPITACCFNHNGNIFAYSSSYDWSKGHEFYNP 347
>MGI|MGI:1913929 [details] [associations]
symbol:Rae1 "RAE1 RNA export 1 homolog (S. pombe)"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0071407 "cellular
response to organic cyclic compound" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913929 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071407
GeneTree:ENSGT00530000063440 HOVERGEN:HBG002942
HOGENOM:HOG000208823 KO:K14298 OMA:RVAIQYV CTD:8480
OrthoDB:EOG4XD3R8 EMBL:AK079383 EMBL:AK146058 EMBL:AK156681
EMBL:BC059051 IPI:IPI00225719 RefSeq:NP_780321.1 UniGene:Mm.4113
ProteinModelPortal:Q8C570 SMR:Q8C570 IntAct:Q8C570 STRING:Q8C570
PhosphoSite:Q8C570 PaxDb:Q8C570 PRIDE:Q8C570
Ensembl:ENSMUST00000029013 GeneID:66679 KEGG:mmu:66679
InParanoid:Q8C570 NextBio:322353 Bgee:Q8C570 CleanEx:MM_RAE1
Genevestigator:Q8C570 GermOnline:ENSMUSG00000027509 Uniprot:Q8C570
Length = 368
Score = 102 (41.0 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 23/92 (25%), Positives = 40/92 (43%)
Query: 2 FRCHPKS---KDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFS 58
F+CH + + VN + F P+ G T ++G + WD +R +L +
Sbjct: 257 FKCHRSNGTNTSAPQDIYAVNGIAFHPV-HGTLATVGSDGRFSFWDKDARTKLKTSEQLD 315
Query: 59 NSVASLSYNHGGQLLAVASSCTYQEATVIEEP 90
+A+ +NH G + A ASS + + P
Sbjct: 316 QPIAACCFNHNGNIFAYASSYDWSKGHEFYNP 347
>UNIPROTKB|J3QT28 [details] [associations]
symbol:BUB3 "Mitotic checkpoint protein BUB3" species:9606
"Homo sapiens" [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0051983 "regulation of chromosome segregation"
evidence=IEA] [GO:0071173 "spindle assembly checkpoint"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC012391 HGNC:HGNC:1151 ChiTaRS:Bub3
ProteinModelPortal:J3QT28 Ensembl:ENST00000407911 Uniprot:J3QT28
Length = 278
Score = 98 (39.6 bits), Expect = 0.00013, P = 0.00013
Identities = 18/59 (30%), Positives = 32/59 (54%)
Query: 2 FRCHPKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNS 60
F+CH ++ + PVN + F + F TG ++G+V WD +++RL + R+ S
Sbjct: 221 FKCHRLKENNIEQIYPVNAISFHNI-HNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTS 278
>SGD|S000005552 [details] [associations]
symbol:BUB3 "Kinetochore checkpoint WD40 repeat protein"
species:4932 "Saccharomyces cerevisiae" [GO:0043130 "ubiquitin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0033597 "mitotic checkpoint complex" evidence=IDA;IPI]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0044774 "mitotic DNA
integrity checkpoint" evidence=IGI] [GO:0007094 "mitotic spindle
assembly checkpoint" evidence=TAS] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000005552 EMBL:X87331
EMBL:BK006948 GO:GO:0007094 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0000778 GO:GO:0043130 PDB:2I3S PDBsum:2I3S
KO:K02180 eggNOG:NOG330182 OrthoDB:EOG4XKZH8 GO:GO:0033597
EMBL:M64707 EMBL:Z74934 PIR:B39654 RefSeq:NP_014669.1 PDB:1U4C
PDB:1YFQ PDB:2I3T PDBsum:1U4C PDBsum:1YFQ PDBsum:2I3T
ProteinModelPortal:P26449 SMR:P26449 DIP:DIP-1219N IntAct:P26449
MINT:MINT-396573 STRING:P26449 PaxDb:P26449 PeptideAtlas:P26449
EnsemblFungi:YOR026W GeneID:854191 KEGG:sce:YOR026W CYGD:YOR026w
HOGENOM:HOG000247885 OMA:RFAFRCH EvolutionaryTrace:P26449
NextBio:976011 Genevestigator:P26449 GermOnline:YOR026W
GO:GO:0070683 Uniprot:P26449
Length = 341
Score = 99 (39.9 bits), Expect = 0.00015, P = 0.00015
Identities = 22/89 (24%), Positives = 47/89 (52%)
Query: 2 FRCHPKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFS-NS 60
FRCH + + PVN + FSP + + G ++G ++ W+ Q+R+++ +F+ +S
Sbjct: 238 FRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAG-SDGIISCWNLQTRKKIKNFAKFNEDS 296
Query: 61 VASLSYNHGGQLLAVASSCTYQEATVIEE 89
V ++ + LA + T++ I++
Sbjct: 297 VVKIACSDNILCLATSDD-TFKTNAAIDQ 324
>UNIPROTKB|E1C7F8 [details] [associations]
symbol:Gga.22300 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071407
GeneTree:ENSGT00530000063440 OMA:RVAIQYV EMBL:AADN02018984
IPI:IPI00818815 ProteinModelPortal:E1C7F8
Ensembl:ENSGALT00000012397 ArrayExpress:E1C7F8 Uniprot:E1C7F8
Length = 368
Score = 99 (39.9 bits), Expect = 0.00017, P = 0.00017
Identities = 22/92 (23%), Positives = 40/92 (43%)
Query: 2 FRCHPKS---KDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFS 58
F+CH + + VN + F P+ G T ++G + WD +R +L +
Sbjct: 257 FKCHRSNGTNTSAPQDIYAVNGIAFHPV-HGTLATVGSDGRFSFWDKDARTKLKTSEQLD 315
Query: 59 NSVASLSYNHGGQLLAVASSCTYQEATVIEEP 90
+++ +NH G + A ASS + + P
Sbjct: 316 QPISACCFNHNGNIFAYASSYDWSKGHEFYNP 347
>UNIPROTKB|Q5E9A4 [details] [associations]
symbol:RAE1 "mRNA export factor" species:9913 "Bos taurus"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071407
GeneTree:ENSGT00530000063440 HOVERGEN:HBG002942
HOGENOM:HOG000208823 KO:K14298 OMA:RVAIQYV EMBL:BT021016
EMBL:BC111248 IPI:IPI00690618 RefSeq:NP_001015585.1
UniGene:Bt.46468 ProteinModelPortal:Q5E9A4 STRING:Q5E9A4
PRIDE:Q5E9A4 Ensembl:ENSBTAT00000014523 GeneID:513080
KEGG:bta:513080 CTD:8480 InParanoid:Q5E9A4 OrthoDB:EOG4XD3R8
NextBio:20870693 Uniprot:Q5E9A4
Length = 368
Score = 99 (39.9 bits), Expect = 0.00017, P = 0.00017
Identities = 22/92 (23%), Positives = 40/92 (43%)
Query: 2 FRCHPKS---KDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFS 58
F+CH + + VN + F P+ G T ++G + WD +R +L +
Sbjct: 257 FKCHRSNGTNTSAPQDIYAVNGIAFHPV-HGTLATVGSDGRFSFWDKDARTKLKTSEQLD 315
Query: 59 NSVASLSYNHGGQLLAVASSCTYQEATVIEEP 90
+++ +NH G + A ASS + + P
Sbjct: 316 QPISACCFNHNGNIFAYASSYDWSKGHEFYNP 347
>UNIPROTKB|E2RSV2 [details] [associations]
symbol:RAE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071407
GeneTree:ENSGT00530000063440 KO:K14298 OMA:RVAIQYV CTD:8480
EMBL:AAEX03014037 RefSeq:XP_543066.2 ProteinModelPortal:E2RSV2
Ensembl:ENSCAFT00000019134 GeneID:485942 KEGG:cfa:485942
NextBio:20859833 Uniprot:E2RSV2
Length = 368
Score = 99 (39.9 bits), Expect = 0.00017, P = 0.00017
Identities = 22/92 (23%), Positives = 40/92 (43%)
Query: 2 FRCHPKS---KDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFS 58
F+CH + + VN + F P+ G T ++G + WD +R +L +
Sbjct: 257 FKCHRSNGTNTSAPQDIYAVNGIAFHPV-HGTLATVGSDGRFSFWDKDARTKLKTSEQLD 315
Query: 59 NSVASLSYNHGGQLLAVASSCTYQEATVIEEP 90
+++ +NH G + A ASS + + P
Sbjct: 316 QPISACCFNHNGNIFAYASSYDWSKGHEFYNP 347
>UNIPROTKB|P78406 [details] [associations]
symbol:RAE1 "mRNA export factor" species:9606 "Homo
sapiens" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0003723 "RNA binding"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005640
"nuclear outer membrane" evidence=TAS] [GO:0005643 "nuclear pore"
evidence=TAS] [GO:0005856 "cytoskeleton" evidence=TAS] [GO:0006406
"mRNA export from nucleus" evidence=TAS] [GO:0005635 "nuclear
envelope" evidence=TAS] [GO:0005975 "carbohydrate metabolic
process" evidence=TAS] [GO:0008645 "hexose transport" evidence=TAS]
[GO:0010827 "regulation of glucose transport" evidence=TAS]
[GO:0015758 "glucose transport" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0019221 "cytokine-mediated
signaling pathway" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_111217 Reactome:REACT_15518
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 EMBL:CH471077 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0016032 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0044281 GO:GO:0005975 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005643 GO:GO:0019221 GO:GO:0015758
GO:GO:0010827 GO:GO:0055085 GO:GO:0003723 GO:GO:0006406
GO:GO:0008017 GO:GO:0005640 GO:GO:0071407 HOVERGEN:HBG002942
KO:K14298 EMBL:AL109955 EMBL:AL135939 PDB:3MMY PDBsum:3MMY CTD:8480
OrthoDB:EOG4XD3R8 EMBL:U84720 EMBL:U85943 EMBL:AY349350
EMBL:AK292247 EMBL:BC103754 EMBL:BC106924 EMBL:BC106923
IPI:IPI00019733 RefSeq:NP_001015885.1 RefSeq:NP_003601.1
UniGene:Hs.371698 ProteinModelPortal:P78406 SMR:P78406
DIP:DIP-41063N IntAct:P78406 MINT:MINT-121447 STRING:P78406
PhosphoSite:P78406 DMDM:3122666 PaxDb:P78406 PRIDE:P78406
Ensembl:ENST00000371242 Ensembl:ENST00000395840
Ensembl:ENST00000395841 GeneID:8480 KEGG:hsa:8480 UCSC:uc002xyg.3
GeneCards:GC20P055926 HGNC:HGNC:9828 HPA:HPA018242 MIM:603343
neXtProt:NX_P78406 PharmGKB:PA34182 InParanoid:P78406
PhylomeDB:P78406 EvolutionaryTrace:P78406 GenomeRNAi:8480
NextBio:31729 ArrayExpress:P78406 Bgee:P78406 CleanEx:HS_RAE1
Genevestigator:P78406 GermOnline:ENSG00000101146 Uniprot:P78406
Length = 368
Score = 99 (39.9 bits), Expect = 0.00017, P = 0.00017
Identities = 22/92 (23%), Positives = 40/92 (43%)
Query: 2 FRCHPKS---KDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFS 58
F+CH + + VN + F P+ G T ++G + WD +R +L +
Sbjct: 257 FKCHRSNGTNTSAPQDIYAVNGIAFHPV-HGTLATVGSDGRFSFWDKDARTKLKTSEQLD 315
Query: 59 NSVASLSYNHGGQLLAVASSCTYQEATVIEEP 90
+++ +NH G + A ASS + + P
Sbjct: 316 QPISACCFNHNGNIFAYASSYDWSKGHEFYNP 347
>UNIPROTKB|A5GFN6 [details] [associations]
symbol:RAE1 "mRNA export factor" species:9823 "Sus scrofa"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071407
GeneTree:ENSGT00530000063440 HOVERGEN:HBG002942
HOGENOM:HOG000208823 KO:K14298 OMA:RVAIQYV CTD:8480
OrthoDB:EOG4XD3R8 EMBL:CR956362 RefSeq:NP_001098766.1
UniGene:Ssc.2778 ProteinModelPortal:A5GFN6 STRING:A5GFN6
Ensembl:ENSSSCT00000008215 Ensembl:ENSSSCT00000036296
GeneID:100125839 KEGG:ssc:100125839 Uniprot:A5GFN6
Length = 368
Score = 99 (39.9 bits), Expect = 0.00017, P = 0.00017
Identities = 22/92 (23%), Positives = 40/92 (43%)
Query: 2 FRCHPKS---KDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFS 58
F+CH + + VN + F P+ G T ++G + WD +R +L +
Sbjct: 257 FKCHRSNGTNTSAPQDIYAVNGIAFHPV-HGTLATVGSDGRFSFWDKDARTKLKTSEQLD 315
Query: 59 NSVASLSYNHGGQLLAVASSCTYQEATVIEEP 90
+++ +NH G + A ASS + + P
Sbjct: 316 QPISACCFNHNGNIFAYASSYDWSKGHEFYNP 347
>UNIPROTKB|E1BDF6 [details] [associations]
symbol:E1BDF6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 IPI:IPI00732803 OMA:LAYACDD
EMBL:DAAA02027701 EMBL:DAAA02027702 EMBL:DAAA02027703
ProteinModelPortal:E1BDF6 Ensembl:ENSBTAT00000049661 Uniprot:E1BDF6
Length = 351
Score = 77 (32.2 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 21 VVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSCT 80
+ F P+ + F TG + V+ WD + R V +LS++H G++LA AS
Sbjct: 230 IKFDPMGK-YFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDH 288
Query: 81 YQEATVIE 88
+ + +E
Sbjct: 289 FIDIAEVE 296
Score = 39 (18.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 1 MFRCHPKSKDGRHHLVPVNDVVFS 24
+FR H K+++ H V+ V +S
Sbjct: 41 LFRGHSKTREFPAHSAKVHSVAWS 64
>UNIPROTKB|Q29RH4 [details] [associations]
symbol:THOC3 "THO complex subunit 3" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 KO:K12880 GO:GO:0003723 GO:GO:0051028 EMBL:BC114172
IPI:IPI00732803 RefSeq:NP_001039765.1 UniGene:Bt.3953
ProteinModelPortal:Q29RH4 GeneID:529231 KEGG:bta:529231 CTD:84321
HOVERGEN:HBG059732 NextBio:20874992 InterPro:IPR011659 Pfam:PF07676
Uniprot:Q29RH4
Length = 351
Score = 77 (32.2 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 21 VVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSCT 80
+ F P+ + F TG + V+ WD + R V +LS++H G++LA AS
Sbjct: 230 IKFDPMGK-YFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDH 288
Query: 81 YQEATVIE 88
+ + +E
Sbjct: 289 FIDIAEVE 296
Score = 39 (18.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 1 MFRCHPKSKDGRHHLVPVNDVVFS 24
+FR H K+++ H V+ V +S
Sbjct: 41 LFRGHSKTREFPAHSAKVHSVAWS 64
>UNIPROTKB|E2RC43 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046784 "intronless viral mRNA export from
host nucleus" evidence=IEA] [GO:0000346 "transcription export
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 KO:K12880 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 CTD:84321 InterPro:IPR011659
Pfam:PF07676 OMA:LAYACDD EMBL:AAEX03002980 RefSeq:XP_537899.2
ProteinModelPortal:E2RC43 Ensembl:ENSCAFT00000022750 GeneID:480781
KEGG:cfa:480781 NextBio:20855728 Uniprot:E2RC43
Length = 351
Score = 77 (32.2 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 21 VVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSCT 80
+ F P+ + F TG + V+ WD + R V +LS++H G++LA AS
Sbjct: 230 IKFDPMGK-YFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDH 288
Query: 81 YQEATVIE 88
+ + +E
Sbjct: 289 FIDIAEVE 296
Score = 39 (18.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 1 MFRCHPKSKDGRHHLVPVNDVVFS 24
+FR H K+++ H V+ V +S
Sbjct: 41 LFRGHSKTREFPAHSAKVHSVAWS 64
>UNIPROTKB|Q96J01 [details] [associations]
symbol:THOC3 "THO complex subunit 3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006406 "mRNA export from nucleus" evidence=IDA] [GO:0000346
"transcription export complex" evidence=IDA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
KO:K12880 GO:GO:0003723 GO:GO:0000346 GO:GO:0046784 CTD:84321
HOVERGEN:HBG059732 InterPro:IPR011659 Pfam:PF07676 EMBL:AC138965
EMBL:BC006849 EMBL:BC068499 IPI:IPI00063729 RefSeq:NP_115737.1
UniGene:Hs.484227 UniGene:Hs.715943 ProteinModelPortal:Q96J01
SMR:Q96J01 IntAct:Q96J01 STRING:Q96J01 PhosphoSite:Q96J01
DMDM:48474597 PaxDb:Q96J01 PRIDE:Q96J01 DNASU:84321
Ensembl:ENST00000265097 GeneID:84321 KEGG:hsa:84321 UCSC:uc003mdg.4
GeneCards:GC05M175344 HGNC:HGNC:19072 HPA:HPA042764 HPA:HPA044009
HPA:HPA045071 MIM:606929 neXtProt:NX_Q96J01 PharmGKB:PA134893535
HOGENOM:HOG000264781 InParanoid:Q96J01 OMA:LAYACDD
OrthoDB:EOG49ZXPJ PhylomeDB:Q96J01 ChiTaRS:THOC3 GenomeRNAi:84321
NextBio:74048 ArrayExpress:Q96J01 Bgee:Q96J01 CleanEx:HS_THOC3
Genevestigator:Q96J01 GermOnline:ENSG00000051596 Uniprot:Q96J01
Length = 351
Score = 77 (32.2 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 21 VVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSCT 80
+ F P+ + F TG + V+ WD + R V +LS++H G++LA AS
Sbjct: 230 IKFDPMGK-YFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDH 288
Query: 81 YQEATVIE 88
+ + +E
Sbjct: 289 FIDIAEVE 296
Score = 39 (18.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 1 MFRCHPKSKDGRHHLVPVNDVVFS 24
+FR H K+++ H V+ V +S
Sbjct: 41 LFRGHSKTREFLAHSAKVHSVAWS 64
>UNIPROTKB|F1S386 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 KO:K12880 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 InterPro:IPR011659 Pfam:PF07676
OMA:LAYACDD EMBL:CU993810 RefSeq:XP_003123712.1
Ensembl:ENSSSCT00000015360 GeneID:100524425 KEGG:ssc:100524425
Uniprot:F1S386
Length = 351
Score = 77 (32.2 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 21 VVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSCT 80
+ F P+ + F TG + V+ WD + R V +LS++H G++LA AS
Sbjct: 230 IKFDPMGK-YFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDH 288
Query: 81 YQEATVIE 88
+ + +E
Sbjct: 289 FIDIAEVE 296
Score = 39 (18.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 1 MFRCHPKSKDGRHHLVPVNDVVFS 24
+FR H K+++ H V+ V +S
Sbjct: 41 LFRGHSKTREFPAHSAKVHSVAWS 64
>MGI|MGI:1920916 [details] [associations]
symbol:Thoc3 "THO complex 3" species:10090 "Mus musculus"
[GO:0000346 "transcription export complex" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=ISO]
[GO:0051028 "mRNA transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1920916 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 KO:K12880
GO:GO:0003723 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:AK010668 EMBL:BC019603 IPI:IPI00311904
RefSeq:NP_082873.2 UniGene:Mm.292487 ProteinModelPortal:Q8VE80
SMR:Q8VE80 PhosphoSite:Q8VE80 PaxDb:Q8VE80 PRIDE:Q8VE80
Ensembl:ENSMUST00000026990 GeneID:73666 KEGG:mmu:73666
UCSC:uc007qod.2 InParanoid:Q8VE80 NextBio:338741 Bgee:Q8VE80
CleanEx:MM_THOC3 Genevestigator:Q8VE80
GermOnline:ENSMUSG00000025872 Uniprot:Q8VE80
Length = 351
Score = 77 (32.2 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 21 VVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSCT 80
+ F P+ + F TG + V+ WD + R V +LS++H G++LA AS
Sbjct: 230 IKFDPMGK-YFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDH 288
Query: 81 YQEATVIE 88
+ + +E
Sbjct: 289 FIDIAEVE 296
Score = 39 (18.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 1 MFRCHPKSKDGRHHLVPVNDVVFS 24
+FR H K+++ H V+ V +S
Sbjct: 41 LFRGHSKTREFPAHSAKVHSVAWS 64
>RGD|1311669 [details] [associations]
symbol:Thoc3 "THO complex 3" species:10116 "Rattus norvegicus"
[GO:0000346 "transcription export complex" evidence=IEA;ISO]
[GO:0006406 "mRNA export from nucleus" evidence=ISO] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311669 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12880 EMBL:CH474032
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:BC168852 IPI:IPI00364620
RefSeq:NP_001099529.1 UniGene:Rn.101956 STRING:B5DEY5
Ensembl:ENSRNOT00000000116 GeneID:290519 KEGG:rno:290519
UCSC:RGD:1311669 NextBio:631152 Genevestigator:B5DEY5
Uniprot:B5DEY5
Length = 351
Score = 77 (32.2 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 21 VVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSCT 80
+ F P+ + F TG + V+ WD + R V +LS++H G++LA AS
Sbjct: 230 IKFDPMGK-YFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDH 288
Query: 81 YQEATVIE 88
+ + +E
Sbjct: 289 FIDIAEVE 296
Score = 39 (18.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 1 MFRCHPKSKDGRHHLVPVNDVVFS 24
+FR H K+++ H V+ V +S
Sbjct: 41 LFRGHSKTREFPAHSAKVHSVAWS 64
>SGD|S000004951 [details] [associations]
symbol:LST8 "Protein required for the transport of Gap1p to
the cell surface" species:4932 "Saccharomyces cerevisiae"
[GO:0030950 "establishment or maintenance of actin cytoskeleton
polarity" evidence=IMP] [GO:0030295 "protein kinase activator
activity" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=IDA] [GO:0001558
"regulation of cell growth" evidence=IPI] [GO:0005774 "vacuolar
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IMP] [GO:0010008 "endosome membrane" evidence=IDA]
[GO:0000139 "Golgi membrane" evidence=IDA] [GO:0031505 "fungal-type
cell wall organization" evidence=IMP] [GO:0031929 "TOR signaling
cascade" evidence=IC;IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IMP] [GO:0031932
"TORC2 complex" evidence=IPI] [GO:0031931 "TORC1 complex"
evidence=IPI] [GO:0006810 "transport" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004951 GO:GO:0005774 GO:GO:0000139 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558
GO:GO:0031929 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BK006947 GO:GO:0030295 GO:GO:0010008
GO:GO:0031930 GO:GO:0031505 KO:K07034 GO:GO:0031931 GO:GO:0030950
RefSeq:NP_014399.3 GeneID:855736 KEGG:sce:YNR002C GO:GO:0031932
GO:GO:0031234 EMBL:X77114 RefSeq:NP_014392.3 GeneID:855726
KEGG:sce:YNL006W KO:K08266 GeneTree:ENSGT00390000014795
HOGENOM:HOG000208395 OMA:NNKGNCY EMBL:Z71282 PIR:S45461
ProteinModelPortal:P41318 SMR:P41318 DIP:DIP-5318N IntAct:P41318
MINT:MINT-562844 STRING:P41318 PaxDb:P41318 PeptideAtlas:P41318
EnsemblFungi:YNL006W CYGD:YNL006w OrthoDB:EOG4GF6PT NextBio:980099
Genevestigator:P41318 GermOnline:YNL006W Uniprot:P41318
Length = 303
Score = 94 (38.1 bits), Expect = 0.00042, P = 0.00042
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFEL-PRFSNSVASLSYNHGGQL 72
H PVN+VV P ++G ++ D +G + WD + +L P S+ SLS G +
Sbjct: 115 HNAPVNEVVIHP-NQGELISCDRDGNIRIWDLGENQCTHQLTPEDDTSLQSLSMASDGSM 173
Query: 73 LAVASS 78
LA A++
Sbjct: 174 LAAANT 179
>ZFIN|ZDB-GENE-040426-1029 [details] [associations]
symbol:rae1 "RAE1 RNA export 1 homolog (S. pombe)"
species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-040426-1029
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00530000063440
HOVERGEN:HBG002942 HSSP:P26449 HOGENOM:HOG000208823 KO:K14298
OMA:RVAIQYV CTD:8480 OrthoDB:EOG4XD3R8 EMBL:BC049445 EMBL:BC065853
IPI:IPI00501635 RefSeq:NP_957292.1 UniGene:Dr.75426
ProteinModelPortal:Q7ZWF0 STRING:Q7ZWF0 PRIDE:Q7ZWF0
Ensembl:ENSDART00000020333 GeneID:393973 KEGG:dre:393973
InParanoid:Q6P037 NextBio:20814944 ArrayExpress:Q7ZWF0 Bgee:Q7ZWF0
Uniprot:Q7ZWF0
Length = 368
Score = 94 (38.1 bits), Expect = 0.00058, P = 0.00058
Identities = 23/82 (28%), Positives = 38/82 (46%)
Query: 2 FRCHPKSKDGRHHLVP-----VNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPR 56
F+CH +G + P VN + F P+ G T ++G + WD +R +L +
Sbjct: 257 FKCH--RSNGTNTATPQDIYAVNAISFHPV-HGTLATVGSDGRFSFWDKDARTKLKTSEQ 313
Query: 57 FSNSVASLSYNHGGQLLAVASS 78
+ + +NH G + A ASS
Sbjct: 314 LDQPITACCFNHNGNIFAYASS 335
>UNIPROTKB|G4MUL1 [details] [associations]
symbol:MGG_07284 "Target-rapamycin complex subunit LST8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0001558 "regulation of cell growth"
evidence=ISS] [GO:0006810 "transport" evidence=ISS] [GO:0007165
"signal transduction" evidence=ISS] [GO:0010008 "endosome membrane"
evidence=ISS] [GO:0030295 "protein kinase activator activity"
evidence=ISS] [GO:0030950 "establishment or maintenance of actin
cytoskeleton polarity" evidence=ISS] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=ISS] [GO:0031505
"fungal-type cell wall organization" evidence=ISS] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=ISS] [GO:0031931
"TORC1 complex" evidence=ISS] [GO:0031932 "TORC2 complex"
evidence=ISS] [GO:0045860 "positive regulation of protein kinase
activity" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0000139 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558 GO:GO:0031929
GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030295
GO:GO:0010008 GO:GO:0031930 GO:GO:0031505 GO:GO:0031931
GO:GO:0030950 EMBL:CM001232 GO:GO:0031932 GO:GO:0031234 KO:K08266
RefSeq:XP_003715510.1 ProteinModelPortal:G4MUL1
EnsemblFungi:MGG_07284T0 GeneID:2683030 KEGG:mgr:MGG_07284
Uniprot:G4MUL1
Length = 317
Score = 93 (37.8 bits), Expect = 0.00059, P = 0.00059
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 13 HHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFEL-PRFSNSVASLSYNHGGQ 71
+H PVNDVV P ++G ++ D G + WD + E+ P SV+SL+ G
Sbjct: 114 NHQSPVNDVVIHP-NQGEIISCDRAGTIRLWDLADNKCTSEMVPEEDVSVSSLTVATDGS 172
Query: 72 LLAVASS 78
LL A++
Sbjct: 173 LLCAANN 179
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.131 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 114 101 0.00091 102 3 11 22 0.40 30
29 0.47 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 48
No. of states in DFA: 559 (59 KB)
Total size of DFA: 120 KB (2079 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.76u 0.10s 10.86t Elapsed: 00:00:00
Total cpu time: 10.77u 0.10s 10.87t Elapsed: 00:00:00
Start: Thu May 9 23:05:06 2013 End: Thu May 9 23:05:06 2013