Query 033677
Match_columns 114
No_of_seqs 138 out of 1274
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 07:56:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033677.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033677hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mmy_A MRNA export factor; mRN 99.7 1.9E-15 6.6E-20 108.4 12.9 88 13-101 271-361 (368)
2 4h5i_A Guanine nucleotide-exch 99.6 1.3E-14 4.4E-19 107.4 12.3 65 14-79 268-333 (365)
3 1yfq_A Cell cycle arrest prote 99.6 1.6E-14 5.4E-19 103.4 11.5 95 2-99 238-340 (342)
4 3vu4_A KMHSV2; beta-propeller 99.4 1.4E-12 4.7E-17 95.9 12.4 71 13-84 193-270 (355)
5 2ymu_A WD-40 repeat protein; u 99.4 1.6E-12 5.4E-17 99.3 12.2 68 14-83 15-86 (577)
6 2ynn_A Coatomer subunit beta'; 99.4 2.5E-12 8.6E-17 92.3 12.1 65 14-79 12-76 (304)
7 4aow_A Guanine nucleotide-bind 99.4 3E-12 1E-16 91.2 12.0 65 14-79 37-107 (340)
8 2xzm_R RACK1; ribosome, transl 99.4 5.2E-12 1.8E-16 91.9 12.1 69 14-83 75-147 (343)
9 1vyh_C Platelet-activating fac 99.4 3.2E-12 1.1E-16 95.5 11.2 68 14-82 107-178 (410)
10 3ow8_A WD repeat-containing pr 99.4 5.3E-12 1.8E-16 91.7 12.0 69 14-83 205-277 (321)
11 3ow8_A WD repeat-containing pr 99.4 6.1E-12 2.1E-16 91.4 12.2 64 15-79 164-227 (321)
12 4ery_A WD repeat-containing pr 99.4 1.3E-11 4.5E-16 88.0 13.1 65 14-79 22-86 (312)
13 1got_B GT-beta; complex (GTP-b 99.4 1.1E-11 3.7E-16 90.2 12.3 65 14-79 183-247 (340)
14 3frx_A Guanine nucleotide-bind 99.4 5.3E-12 1.8E-16 91.2 10.5 68 14-82 64-135 (319)
15 4gqb_B Methylosome protein 50; 99.4 1.4E-11 4.7E-16 90.8 12.8 65 14-79 126-191 (344)
16 3zwl_B Eukaryotic translation 99.3 1.6E-11 5.5E-16 87.8 12.3 66 13-79 30-95 (369)
17 1got_B GT-beta; complex (GTP-b 99.3 2.4E-11 8.1E-16 88.4 13.0 65 14-79 54-118 (340)
18 3iz6_a 40S ribosomal protein R 99.3 4.1E-12 1.4E-16 93.8 8.7 65 14-79 65-129 (380)
19 4g56_B MGC81050 protein; prote 99.3 7.2E-12 2.5E-16 92.2 9.7 64 14-79 268-333 (357)
20 2hes_X YDR267CP; beta-propelle 99.3 3.7E-11 1.3E-15 87.2 13.3 69 14-83 57-136 (330)
21 2ynn_A Coatomer subunit beta'; 99.3 1.2E-11 4.3E-16 88.6 10.6 69 14-83 54-126 (304)
22 1vyh_C Platelet-activating fac 99.3 1.4E-11 4.7E-16 92.1 11.1 65 14-79 149-213 (410)
23 3fm0_A Protein CIAO1; WDR39,SG 99.3 2.3E-11 8E-16 88.7 12.0 65 14-79 60-126 (345)
24 2ymu_A WD-40 repeat protein; u 99.3 7.6E-12 2.6E-16 95.5 8.8 64 14-79 507-570 (577)
25 2hes_X YDR267CP; beta-propelle 99.3 4.7E-11 1.6E-15 86.6 12.6 65 14-79 106-174 (330)
26 4ggc_A P55CDC, cell division c 99.3 2.9E-11 1E-15 85.3 11.2 64 15-79 240-305 (318)
27 4ery_A WD repeat-containing pr 99.3 5.4E-11 1.9E-15 84.8 12.7 65 14-79 64-128 (312)
28 3f3f_A Nucleoporin SEH1; struc 99.3 4E-11 1.4E-15 84.5 11.4 65 14-79 10-80 (351)
29 2pbi_B Guanine nucleotide-bind 99.3 1.9E-11 6.6E-16 89.7 10.1 64 15-79 284-347 (354)
30 3vl1_A 26S proteasome regulato 99.3 3.8E-11 1.3E-15 88.2 11.5 66 13-79 137-202 (420)
31 2pm7_B Protein transport prote 99.3 4.6E-11 1.6E-15 85.4 11.6 69 14-83 8-84 (297)
32 4gqb_B Methylosome protein 50; 99.3 7.3E-11 2.5E-15 86.9 12.6 66 14-79 213-279 (344)
33 3f3f_A Nucleoporin SEH1; struc 99.3 3.4E-11 1.2E-15 84.9 10.2 65 14-79 213-327 (351)
34 2pbi_B Guanine nucleotide-bind 99.3 4.4E-11 1.5E-15 87.8 11.0 65 14-79 63-127 (354)
35 3lrv_A PRE-mRNA-splicing facto 99.3 2.1E-11 7.2E-16 88.5 9.2 67 15-82 170-241 (343)
36 3iz6_a 40S ribosomal protein R 99.3 4.5E-11 1.5E-15 88.2 11.0 65 14-79 248-319 (380)
37 1nr0_A Actin interacting prote 99.3 2.9E-11 1E-15 94.5 10.3 68 14-82 189-267 (611)
38 1erj_A Transcriptional repress 99.3 9.3E-11 3.2E-15 86.9 12.3 65 17-82 125-193 (393)
39 3frx_A Guanine nucleotide-bind 99.3 6.8E-11 2.3E-15 85.4 11.0 68 14-82 16-93 (319)
40 3mmy_A MRNA export factor; mRN 99.3 6.8E-11 2.3E-15 84.5 10.9 66 13-79 37-107 (368)
41 3bg1_A Protein SEC13 homolog; 99.2 2.4E-11 8.1E-16 87.7 8.0 65 14-79 12-80 (316)
42 4e54_B DNA damage-binding prot 99.2 2.8E-11 9.5E-16 90.7 8.7 68 15-82 119-193 (435)
43 3fm0_A Protein CIAO1; WDR39,SG 99.2 8.8E-11 3E-15 85.6 11.1 65 14-79 104-171 (345)
44 3k26_A Polycomb protein EED; W 99.2 2.4E-10 8.2E-15 81.7 12.7 66 14-79 114-182 (366)
45 3dm0_A Maltose-binding peripla 99.2 5.3E-11 1.8E-15 94.0 9.9 68 14-82 429-500 (694)
46 2aq5_A Coronin-1A; WD40 repeat 99.2 1.4E-10 4.7E-15 85.6 11.6 65 14-79 130-197 (402)
47 1nr0_A Actin interacting prote 99.2 1.4E-10 4.7E-15 90.7 12.1 68 14-82 146-218 (611)
48 3mkq_A Coatomer beta'-subunit; 99.2 1.6E-10 5.3E-15 91.5 12.1 65 14-79 12-76 (814)
49 2oit_A Nucleoporin 214KDA; NH2 99.2 7.5E-11 2.6E-15 89.5 9.9 65 14-79 148-213 (434)
50 3jrp_A Fusion protein of prote 99.2 9.5E-11 3.3E-15 84.2 9.9 65 14-79 10-78 (379)
51 3odt_A Protein DOA1; ubiquitin 99.2 1.4E-10 4.8E-15 81.4 10.5 64 14-79 17-80 (313)
52 1pgu_A Actin interacting prote 99.2 2.2E-10 7.4E-15 87.5 12.1 66 13-79 486-562 (615)
53 3sfz_A APAF-1, apoptotic pepti 99.2 2.3E-10 8E-15 94.7 13.1 65 14-79 614-678 (1249)
54 4g56_B MGC81050 protein; prote 99.2 1.1E-10 3.9E-15 85.7 10.1 66 13-79 137-203 (357)
55 1k8k_C P40, ARP2/3 complex 41 99.2 1.1E-10 3.8E-15 84.0 9.9 65 14-79 7-73 (372)
56 4ggc_A P55CDC, cell division c 99.2 2.7E-10 9.2E-15 80.3 11.5 59 18-79 28-88 (318)
57 2xzm_R RACK1; ribosome, transl 99.2 3.9E-10 1.3E-14 81.9 12.6 69 14-82 20-104 (343)
58 3k26_A Polycomb protein EED; W 99.2 2.8E-10 9.6E-15 81.4 11.6 65 14-79 68-137 (366)
59 2aq5_A Coronin-1A; WD40 repeat 99.2 2.8E-10 9.4E-15 84.0 11.7 67 13-79 79-153 (402)
60 2pm7_B Protein transport prote 99.2 2.9E-10 1E-14 81.2 11.2 65 14-79 52-122 (297)
61 2oaj_A Protein SNI1; WD40 repe 99.2 1.2E-10 4E-15 95.6 10.3 64 14-79 487-595 (902)
62 4e54_B DNA damage-binding prot 99.2 1E-10 3.5E-15 87.6 9.2 65 14-79 249-317 (435)
63 3dw8_B Serine/threonine-protei 99.2 2.9E-10 1E-14 83.9 11.3 70 9-79 22-116 (447)
64 1sq9_A Antiviral protein SKI8; 99.2 3.8E-10 1.3E-14 82.1 11.8 65 14-79 290-385 (397)
65 2pm9_A Protein WEB1, protein t 99.2 1.6E-10 5.5E-15 84.4 9.6 66 14-79 261-327 (416)
66 1erj_A Transcriptional repress 99.2 4.1E-10 1.4E-14 83.4 11.8 66 13-79 254-331 (393)
67 3ei3_B DNA damage-binding prot 99.2 5.7E-10 1.9E-14 81.4 12.4 64 14-79 203-272 (383)
68 1gxr_A ESG1, transducin-like e 99.2 6.9E-10 2.4E-14 78.5 12.3 65 14-79 140-204 (337)
69 1sq9_A Antiviral protein SKI8; 99.2 3.9E-10 1.3E-14 82.0 11.1 64 15-79 233-312 (397)
70 3bg1_A Protein SEC13 homolog; 99.2 2.1E-10 7.1E-15 82.7 9.5 66 14-79 56-126 (316)
71 4gq1_A NUP37; propeller, trans 99.1 8.5E-11 2.9E-15 87.3 7.3 66 14-79 135-208 (393)
72 3dwl_C Actin-related protein 2 99.1 4.4E-11 1.5E-15 86.9 5.6 66 13-79 203-272 (377)
73 3dm0_A Maltose-binding peripla 99.1 7.2E-10 2.5E-14 87.5 12.8 71 13-83 380-459 (694)
74 4gga_A P55CDC, cell division c 99.1 5.5E-10 1.9E-14 83.1 11.4 68 16-84 321-394 (420)
75 3dwl_C Actin-related protein 2 99.1 9.6E-11 3.3E-15 85.0 7.1 65 14-79 54-121 (377)
76 3i2n_A WD repeat-containing pr 99.1 2.8E-10 9.5E-15 81.3 8.9 65 14-79 258-343 (357)
77 1gxr_A ESG1, transducin-like e 99.1 1.4E-09 4.8E-14 76.9 12.3 65 14-79 96-162 (337)
78 3ei3_B DNA damage-binding prot 99.1 1.1E-09 3.8E-14 79.8 12.1 63 15-79 163-226 (383)
79 3odt_A Protein DOA1; ubiquitin 99.1 8.6E-10 2.9E-14 77.4 11.0 63 14-79 224-286 (313)
80 1k8k_C P40, ARP2/3 complex 41 99.1 1.7E-09 5.7E-14 77.8 12.8 65 14-79 141-223 (372)
81 1r5m_A SIR4-interacting protei 99.1 1.6E-09 5.4E-14 78.7 12.4 64 14-79 107-170 (425)
82 1r5m_A SIR4-interacting protei 99.1 4.4E-10 1.5E-14 81.7 9.2 64 15-79 330-415 (425)
83 4gga_A P55CDC, cell division c 99.1 1E-09 3.5E-14 81.7 11.4 61 16-79 106-168 (420)
84 3jrp_A Fusion protein of prote 99.1 1E-09 3.4E-14 78.8 11.0 65 14-79 54-124 (379)
85 3gre_A Serine/threonine-protei 99.1 3.7E-10 1.3E-14 83.7 8.6 65 14-79 213-282 (437)
86 4a11_B DNA excision repair pro 99.1 1.7E-09 5.8E-14 78.3 12.0 70 13-83 243-363 (408)
87 4h5i_A Guanine nucleotide-exch 99.1 4.5E-10 1.5E-14 82.9 9.0 61 17-79 135-197 (365)
88 3dw8_B Serine/threonine-protei 99.1 8.1E-10 2.8E-14 81.5 10.0 66 13-79 224-306 (447)
89 3vl1_A 26S proteasome regulato 99.1 2.7E-09 9.4E-14 78.2 12.8 61 18-79 100-160 (420)
90 3zwl_B Eukaryotic translation 99.1 1.2E-09 4.1E-14 78.0 10.5 64 14-79 73-136 (369)
91 1yfq_A Cell cycle arrest prote 99.1 5E-10 1.7E-14 79.8 8.4 66 13-79 9-78 (342)
92 3lrv_A PRE-mRNA-splicing facto 99.1 2.4E-09 8.1E-14 77.6 12.0 64 16-79 126-191 (343)
93 2j04_B YDR362CP, TAU91; beta p 99.1 2E-10 6.8E-15 89.5 6.7 65 17-82 357-425 (524)
94 4aow_A Guanine nucleotide-bind 99.1 3.8E-09 1.3E-13 75.0 12.8 66 13-79 169-236 (340)
95 3mkq_A Coatomer beta'-subunit; 99.1 9.4E-10 3.2E-14 87.0 10.5 65 14-79 54-118 (814)
96 2vdu_B TRNA (guanine-N(7)-)-me 99.1 2.3E-09 7.9E-14 80.4 11.7 65 14-79 101-170 (450)
97 2j04_A TAU60, YPL007P, hypothe 99.1 1.3E-09 4.4E-14 86.5 10.6 65 15-83 85-158 (588)
98 2vdu_B TRNA (guanine-N(7)-)-me 99.0 1.5E-09 5.2E-14 81.4 9.8 64 14-79 194-261 (450)
99 2xyi_A Probable histone-bindin 99.0 3.2E-09 1.1E-13 79.4 11.3 66 13-79 275-343 (430)
100 4a11_B DNA excision repair pro 99.0 7E-09 2.4E-13 75.1 12.7 65 14-79 185-266 (408)
101 2pm9_A Protein WEB1, protein t 99.0 1E-09 3.4E-14 80.2 8.3 66 13-79 65-135 (416)
102 3i2n_A WD repeat-containing pr 99.0 1.5E-09 5.1E-14 77.5 9.0 65 14-79 64-138 (357)
103 1pgu_A Actin interacting prote 99.0 5.1E-09 1.8E-13 79.8 12.3 65 14-79 159-228 (615)
104 2j04_A TAU60, YPL007P, hypothe 99.0 1.9E-09 6.3E-14 85.5 9.9 60 17-79 131-201 (588)
105 2w18_A PALB2, fancn, partner a 99.0 1.9E-09 6.4E-14 81.0 9.3 50 30-79 297-347 (356)
106 3jro_A Fusion protein of prote 99.0 1.4E-09 4.8E-14 87.2 8.8 65 14-79 8-76 (753)
107 3v7d_B Cell division control p 99.0 6E-09 2E-13 77.7 11.6 64 14-79 161-226 (464)
108 2xyi_A Probable histone-bindin 99.0 9.9E-09 3.4E-13 76.7 12.4 67 13-79 229-299 (430)
109 4aez_A CDC20, WD repeat-contai 99.0 5.5E-09 1.9E-13 77.1 10.6 63 14-77 216-279 (401)
110 3jro_A Fusion protein of prote 98.9 7.8E-09 2.7E-13 82.9 11.3 65 14-79 52-122 (753)
111 2ovr_B FBW7, F-BOX/WD repeat p 98.9 8.2E-09 2.8E-13 76.9 10.8 77 14-100 361-442 (445)
112 3sfz_A APAF-1, apoptotic pepti 98.9 1.4E-08 4.9E-13 84.0 12.9 65 14-79 656-722 (1249)
113 4aez_A CDC20, WD repeat-contai 98.9 1.8E-08 6.2E-13 74.4 12.2 63 14-79 133-195 (401)
114 4gq1_A NUP37; propeller, trans 98.9 2.3E-09 7.9E-14 79.5 7.4 58 22-79 322-380 (393)
115 3gre_A Serine/threonine-protei 98.9 1.2E-08 4.2E-13 75.5 11.2 62 17-79 170-235 (437)
116 3v7d_B Cell division control p 98.9 1.6E-08 5.3E-13 75.4 11.6 63 14-79 309-371 (464)
117 2j04_B YDR362CP, TAU91; beta p 98.9 5.8E-09 2E-13 81.3 8.8 67 15-83 266-340 (524)
118 2oaj_A Protein SNI1; WD40 repe 98.9 4.9E-09 1.7E-13 86.1 8.5 68 14-83 574-659 (902)
119 2oit_A Nucleoporin 214KDA; NH2 98.8 8.4E-09 2.9E-13 78.2 6.4 64 15-79 92-171 (434)
120 2hqs_A Protein TOLB; TOLB, PAL 98.7 2.4E-07 8.3E-12 69.4 12.4 62 14-77 177-241 (415)
121 3vu4_A KMHSV2; beta-propeller 98.7 1.3E-07 4.4E-12 69.2 10.5 65 14-79 239-326 (355)
122 1p22_A F-BOX/WD-repeat protein 98.7 2.3E-07 7.7E-12 69.1 11.9 61 14-79 132-192 (435)
123 2w18_A PALB2, fancn, partner a 98.7 3.3E-08 1.1E-12 74.2 7.1 60 18-77 181-245 (356)
124 3bws_A Protein LP49; two-domai 98.7 1.2E-07 4E-12 69.8 9.3 62 15-77 169-230 (433)
125 1l0q_A Surface layer protein; 98.7 3.4E-07 1.2E-11 66.5 11.4 61 17-79 33-94 (391)
126 1p22_A F-BOX/WD-repeat protein 98.7 1.9E-07 6.5E-12 69.5 10.2 60 15-79 296-355 (435)
127 2ovr_B FBW7, F-BOX/WD repeat p 98.6 4.9E-07 1.7E-11 67.2 11.7 61 14-79 158-218 (445)
128 2hqs_A Protein TOLB; TOLB, PAL 98.6 7.4E-07 2.5E-11 66.7 12.1 63 15-79 222-287 (415)
129 3bws_A Protein LP49; two-domai 98.6 9.7E-07 3.3E-11 64.9 12.1 62 15-78 344-420 (433)
130 2ojh_A Uncharacterized protein 98.6 4.8E-07 1.6E-11 62.2 9.3 62 15-78 41-104 (297)
131 2ojh_A Uncharacterized protein 98.4 9.6E-07 3.3E-11 60.7 8.1 64 15-79 172-237 (297)
132 1k32_A Tricorn protease; prote 98.4 8.4E-07 2.9E-11 73.2 8.6 64 15-79 378-441 (1045)
133 1l0q_A Surface layer protein; 98.4 6.1E-06 2.1E-10 59.8 12.1 62 16-79 200-265 (391)
134 2ecf_A Dipeptidyl peptidase IV 98.4 1.7E-06 5.8E-11 68.1 9.3 64 15-79 36-129 (741)
135 3hfq_A Uncharacterized protein 98.3 8.6E-06 3E-10 58.4 11.5 62 17-79 241-306 (347)
136 1pby_B Quinohemoprotein amine 98.3 1.1E-05 3.6E-10 56.8 10.5 59 17-79 242-300 (337)
137 3vgz_A Uncharacterized protein 98.2 1.3E-05 4.4E-10 57.0 10.3 74 19-94 275-349 (353)
138 1nir_A Nitrite reductase; hemo 98.2 1.5E-05 5.2E-10 62.0 11.1 59 18-78 181-245 (543)
139 2ecf_A Dipeptidyl peptidase IV 98.2 4.3E-06 1.5E-10 65.8 7.0 61 17-79 110-172 (741)
140 1ri6_A Putative isomerase YBHE 98.2 1.3E-05 4.6E-10 56.4 8.9 62 15-78 37-103 (343)
141 1xfd_A DIP, dipeptidyl aminope 98.2 9.3E-07 3.2E-11 69.3 3.1 60 18-79 19-81 (723)
142 3o4h_A Acylamino-acid-releasin 98.1 5.8E-06 2E-10 63.7 7.3 59 19-79 153-215 (582)
143 1ri6_A Putative isomerase YBHE 98.1 1.9E-05 6.6E-10 55.6 9.1 61 17-79 232-297 (343)
144 3scy_A Hypothetical bacterial 98.1 5.3E-05 1.8E-09 54.6 11.5 61 17-79 260-326 (361)
145 3u4y_A Uncharacterized protein 98.1 2.4E-05 8.3E-10 55.3 9.2 61 16-78 176-240 (331)
146 3vgz_A Uncharacterized protein 98.1 3.1E-05 1.1E-09 55.0 9.8 62 17-79 186-251 (353)
147 3scy_A Hypothetical bacterial 98.1 8.2E-05 2.8E-09 53.6 11.9 62 17-79 212-279 (361)
148 3o4h_A Acylamino-acid-releasin 98.1 3.7E-06 1.3E-10 64.8 4.7 63 15-79 194-266 (582)
149 2xdw_A Prolyl endopeptidase; a 98.0 4.2E-05 1.4E-09 60.6 10.0 83 16-100 125-217 (710)
150 1k32_A Tricorn protease; prote 98.0 1.7E-05 5.8E-10 65.5 7.9 63 15-79 420-492 (1045)
151 1jmx_B Amine dehydrogenase; ox 98.0 2.1E-05 7.2E-10 55.7 7.5 61 17-78 44-111 (349)
152 1xfd_A DIP, dipeptidyl aminope 98.0 7.1E-06 2.4E-10 64.3 5.2 61 17-79 115-193 (723)
153 1z68_A Fibroblast activation p 98.0 1.2E-05 3.9E-10 63.3 6.0 61 17-79 61-130 (719)
154 3hfq_A Uncharacterized protein 98.0 7.2E-05 2.4E-09 53.5 9.7 64 15-79 85-161 (347)
155 3u4y_A Uncharacterized protein 97.9 2.8E-05 9.7E-10 55.0 7.3 61 17-79 42-104 (331)
156 4a5s_A Dipeptidyl peptidase 4 97.9 2.2E-05 7.5E-10 62.6 7.4 59 19-79 65-132 (740)
157 1pby_B Quinohemoprotein amine 97.9 2.4E-05 8.3E-10 55.0 6.8 61 17-79 83-155 (337)
158 1jmx_B Amine dehydrogenase; ox 97.9 5.2E-05 1.8E-09 53.6 8.5 58 20-78 4-62 (349)
159 1nir_A Nitrite reductase; hemo 97.9 2.1E-05 7.1E-10 61.2 6.8 55 23-79 145-199 (543)
160 2z3z_A Dipeptidyl aminopeptida 97.9 4.7E-05 1.6E-09 59.6 8.6 58 16-77 82-139 (706)
161 2z3z_A Dipeptidyl aminopeptida 97.9 2.9E-05 9.8E-10 60.9 7.0 61 18-79 183-278 (706)
162 2dg1_A DRP35, lactonase; beta 97.9 0.00014 4.9E-09 51.6 9.9 62 17-79 46-107 (333)
163 2bkl_A Prolyl endopeptidase; m 97.8 4.2E-05 1.4E-09 60.6 7.4 82 16-100 121-211 (695)
164 1z68_A Fibroblast activation p 97.8 2E-05 7E-10 61.9 5.5 57 20-78 20-79 (719)
165 3pe7_A Oligogalacturonate lyas 97.8 7.4E-05 2.5E-09 53.9 7.5 58 21-79 41-101 (388)
166 1jof_A Carboxy-CIS,CIS-muconat 97.8 0.00045 1.5E-08 50.2 11.6 63 16-79 145-213 (365)
167 3azo_A Aminopeptidase; POP fam 97.8 2.9E-05 1E-09 60.4 5.0 63 15-79 129-208 (662)
168 2gop_A Trilobed protease; beta 97.7 0.00014 4.7E-09 51.9 8.1 61 16-79 59-124 (347)
169 1q7f_A NHL, brain tumor CG1071 97.7 0.00056 1.9E-08 47.6 10.8 61 16-79 207-270 (286)
170 3fvz_A Peptidyl-glycine alpha- 97.7 0.0004 1.4E-08 49.9 10.2 64 15-79 23-111 (329)
171 2oiz_A Aromatic amine dehydrog 97.7 0.00017 5.8E-09 53.0 7.6 52 18-71 307-360 (361)
172 3azo_A Aminopeptidase; POP fam 97.6 0.0002 6.8E-09 55.7 7.6 62 17-79 189-262 (662)
173 2oiz_A Aromatic amine dehydrog 97.6 0.00021 7.2E-09 52.5 7.4 55 21-78 259-324 (361)
174 1pjx_A Dfpase, DIISOPROPYLFLUO 97.6 0.00065 2.2E-08 47.5 9.3 62 17-79 227-288 (314)
175 2xdw_A Prolyl endopeptidase; a 97.5 0.00072 2.5E-08 53.5 10.3 61 18-79 173-253 (710)
176 3e5z_A Putative gluconolactona 97.5 0.00038 1.3E-08 48.9 7.8 60 16-78 28-88 (296)
177 1jof_A Carboxy-CIS,CIS-muconat 97.5 0.00024 8.2E-09 51.7 6.7 62 17-79 255-330 (365)
178 4a5s_A Dipeptidyl peptidase 4 97.5 9.6E-05 3.3E-09 58.9 4.8 59 18-79 19-82 (740)
179 3pe7_A Oligogalacturonate lyas 97.5 0.00018 6.1E-09 51.9 5.4 69 22-100 296-384 (388)
180 1q7f_A NHL, brain tumor CG1071 97.5 0.001 3.4E-08 46.3 9.2 62 16-79 164-227 (286)
181 1xip_A Nucleoporin NUP159; bet 97.4 0.0013 4.5E-08 49.7 10.1 61 14-77 161-232 (388)
182 3g4e_A Regucalcin; six bladed 97.4 0.00085 2.9E-08 47.5 8.7 62 17-79 200-262 (297)
183 2gop_A Trilobed protease; beta 97.4 0.00042 1.4E-08 49.3 6.8 57 18-78 106-189 (347)
184 2bkl_A Prolyl endopeptidase; m 97.4 0.00042 1.4E-08 54.8 7.2 60 19-79 171-247 (695)
185 3c5m_A Oligogalacturonate lyas 97.4 0.00028 9.5E-09 50.7 5.6 60 18-79 38-101 (396)
186 1xip_A Nucleoporin NUP159; bet 97.4 0.00046 1.6E-08 52.1 7.0 54 17-79 128-181 (388)
187 1rwi_B Serine/threonine-protei 97.4 0.0025 8.6E-08 43.6 10.2 63 16-79 192-254 (270)
188 1qks_A Cytochrome CD1 nitrite 97.4 0.0024 8.2E-08 50.2 11.2 61 17-79 198-264 (567)
189 2dg1_A DRP35, lactonase; beta 97.3 0.0017 5.8E-08 46.0 8.5 61 17-79 234-300 (333)
190 3no2_A Uncharacterized protein 97.2 0.0011 3.8E-08 47.1 6.7 48 28-75 5-53 (276)
191 3e5z_A Putative gluconolactona 97.1 0.0016 5.4E-08 45.6 7.3 57 18-79 220-277 (296)
192 1yr2_A Prolyl oligopeptidase; 97.1 0.0015 5.2E-08 52.0 7.1 81 16-99 163-251 (741)
193 3fvz_A Peptidyl-glycine alpha- 97.0 0.0053 1.8E-07 44.0 9.3 62 15-77 90-162 (329)
194 3iuj_A Prolyl endopeptidase; h 97.0 0.00097 3.3E-08 52.9 5.8 82 15-100 128-217 (693)
195 3c5m_A Oligogalacturonate lyas 97.0 0.0019 6.3E-08 46.4 6.3 58 17-78 239-302 (396)
196 1yr2_A Prolyl oligopeptidase; 96.9 0.0058 2E-07 48.6 9.3 59 19-79 212-288 (741)
197 2mad_H Methylamine dehydrogena 96.9 0.0056 1.9E-07 45.4 8.7 58 20-78 70-144 (373)
198 1rwi_B Serine/threonine-protei 96.8 0.0057 2E-07 41.7 7.6 62 17-79 151-212 (270)
199 2ghs_A AGR_C_1268P; regucalcin 96.8 0.014 4.8E-07 41.8 9.6 60 18-79 232-292 (326)
200 2mad_H Methylamine dehydrogena 96.6 0.03 1E-06 41.4 11.0 56 20-77 271-337 (373)
201 1mda_H Methylamine dehydrogena 96.6 0.0021 7.1E-08 48.1 4.6 57 20-77 69-142 (368)
202 2z2n_A Virginiamycin B lyase; 96.6 0.029 1E-06 38.4 9.9 60 16-77 15-75 (299)
203 3dsm_A Uncharacterized protein 96.5 0.0085 2.9E-07 43.1 7.1 61 18-79 174-245 (328)
204 2qe8_A Uncharacterized protein 96.5 0.035 1.2E-06 40.0 10.2 62 17-79 249-311 (343)
205 3no2_A Uncharacterized protein 96.5 0.017 5.7E-07 40.9 8.3 58 17-78 38-96 (276)
206 2z2n_A Virginiamycin B lyase; 96.5 0.036 1.2E-06 37.9 9.8 62 16-78 57-118 (299)
207 1pjx_A Dfpase, DIISOPROPYLFLUO 96.4 0.011 3.8E-07 41.1 6.9 61 16-78 18-91 (314)
208 3hrp_A Uncharacterized protein 96.4 0.018 6.3E-07 43.0 8.5 61 15-78 130-190 (409)
209 3sjl_D Methylamine dehydrogena 96.3 0.0051 1.8E-07 46.4 5.0 58 20-78 82-156 (386)
210 1qks_A Cytochrome CD1 nitrite 96.2 0.015 5.2E-07 45.6 7.5 52 27-79 166-217 (567)
211 3g4e_A Regucalcin; six bladed 96.1 0.1 3.6E-06 36.5 10.6 59 16-77 54-116 (297)
212 3dr2_A Exported gluconolactona 95.9 0.037 1.3E-06 39.0 7.8 59 17-78 46-105 (305)
213 2qe8_A Uncharacterized protein 95.9 0.045 1.5E-06 39.4 8.3 62 17-79 121-215 (343)
214 2qc5_A Streptogramin B lactona 95.9 0.1 3.6E-06 35.5 9.8 60 16-77 62-122 (300)
215 3c75_H MADH, methylamine dehyd 95.9 0.0085 2.9E-07 45.7 4.4 58 20-78 122-196 (426)
216 2qc5_A Streptogramin B lactona 95.7 0.13 4.5E-06 35.0 9.8 59 17-77 189-248 (300)
217 3hrp_A Uncharacterized protein 95.7 0.15 5.2E-06 37.9 10.7 60 16-77 323-398 (409)
218 3dr2_A Exported gluconolactona 95.7 0.028 9.5E-07 39.6 6.3 59 17-78 132-207 (305)
219 3dsm_A Uncharacterized protein 95.5 0.11 3.7E-06 37.2 8.8 56 18-76 46-101 (328)
220 2hz6_A Endoplasmic reticulum t 95.0 0.023 7.9E-07 41.7 4.0 50 28-79 9-58 (369)
221 2xe4_A Oligopeptidase B; hydro 95.0 0.019 6.3E-07 46.2 3.7 60 17-79 175-241 (751)
222 2ghs_A AGR_C_1268P; regucalcin 95.0 0.35 1.2E-05 34.4 10.2 61 16-77 179-248 (326)
223 2p4o_A Hypothetical protein; p 94.9 0.18 6E-06 35.6 8.4 57 17-76 33-89 (306)
224 3sjl_D Methylamine dehydrogena 94.6 0.12 4E-06 38.9 7.1 54 21-77 38-96 (386)
225 1mda_H Methylamine dehydrogena 94.5 0.1 3.5E-06 38.8 6.6 55 21-77 269-333 (368)
226 2xe4_A Oligopeptidase B; hydro 94.3 0.2 6.9E-06 40.2 8.2 59 19-78 224-290 (751)
227 1yiq_A Quinohemoprotein alcoho 94.2 0.053 1.8E-06 43.3 4.7 56 22-78 481-538 (689)
228 2ece_A 462AA long hypothetical 94.0 0.16 5.6E-06 39.2 6.8 83 17-101 322-426 (462)
229 3iuj_A Prolyl endopeptidase; h 93.9 0.64 2.2E-05 36.7 10.4 58 19-78 178-253 (693)
230 1npe_A Nidogen, entactin; glyc 93.9 0.64 2.2E-05 31.7 9.2 60 18-78 38-98 (267)
231 3tc9_A Hypothetical hydrolase; 93.1 0.74 2.5E-05 34.5 9.1 61 18-78 228-289 (430)
232 1kb0_A Quinohemoprotein alcoho 92.9 0.12 4.1E-06 41.2 4.7 58 20-78 481-540 (677)
233 3qqz_A Putative uncharacterize 92.9 0.67 2.3E-05 32.8 8.2 60 15-75 172-240 (255)
234 3c75_H MADH, methylamine dehyd 92.9 0.36 1.2E-05 36.7 7.1 49 27-77 83-136 (426)
235 2p4o_A Hypothetical protein; p 92.9 0.56 1.9E-05 32.9 7.8 60 18-79 214-278 (306)
236 1fwx_A Nitrous oxide reductase 92.6 0.2 7E-06 39.8 5.5 62 17-79 332-408 (595)
237 2ece_A 462AA long hypothetical 92.4 0.38 1.3E-05 37.2 6.7 58 20-78 192-272 (462)
238 3pbp_A Nucleoporin NUP82; beta 92.0 1.4 4.9E-05 33.9 9.3 62 15-77 124-198 (452)
239 2iwa_A Glutamine cyclotransfer 91.7 2.3 7.7E-05 30.2 9.7 57 18-77 23-82 (266)
240 3qqz_A Putative uncharacterize 91.4 2.7 9.3E-05 29.6 10.4 59 16-77 27-87 (255)
241 3nol_A Glutamine cyclotransfer 91.4 1.7 5.9E-05 31.0 8.8 63 17-82 173-247 (262)
242 1npe_A Nidogen, entactin; glyc 91.0 2.6 8.8E-05 28.6 9.9 61 16-78 122-186 (267)
243 2fp8_A Strictosidine synthase; 90.1 1.8 6.2E-05 30.3 8.0 59 17-77 186-247 (322)
244 3nok_A Glutaminyl cyclase; bet 89.8 1.5 5.1E-05 31.4 7.3 35 18-54 57-91 (268)
245 4hw6_A Hypothetical protein, I 89.7 3 0.0001 31.2 9.4 60 15-76 138-199 (433)
246 3kya_A Putative phosphatase; s 89.5 1.4 4.7E-05 34.2 7.4 61 18-78 249-329 (496)
247 2iwa_A Glutamine cyclotransfer 89.4 1.8 6.3E-05 30.7 7.6 60 18-79 154-226 (266)
248 1flg_A Protein (quinoprotein e 89.0 0.82 2.8E-05 35.8 5.9 51 28-78 497-549 (582)
249 4a9v_A PHOX; hydrolase, beta-p 88.6 4.4 0.00015 32.3 9.7 64 15-79 475-551 (592)
250 2fp8_A Strictosidine synthase; 88.4 1.6 5.4E-05 30.6 6.7 56 18-75 21-97 (322)
251 2p9w_A MAL S 1 allergenic prot 88.3 2.6 8.9E-05 31.1 7.8 61 17-79 138-205 (334)
252 3v64_C Agrin; beta propeller, 88.3 3.4 0.00012 29.8 8.5 62 16-78 159-222 (349)
253 1kb0_A Quinohemoprotein alcoho 88.2 0.86 2.9E-05 36.2 5.6 41 38-79 457-497 (677)
254 3v65_B Low-density lipoprotein 87.8 3.8 0.00013 30.0 8.5 62 16-78 202-265 (386)
255 4hw6_A Hypothetical protein, I 87.3 2.3 7.9E-05 31.9 7.3 61 18-78 230-292 (433)
256 1fwx_A Nitrous oxide reductase 86.5 4.4 0.00015 32.3 8.7 60 18-79 136-215 (595)
257 1ijq_A LDL receptor, low-densi 86.5 6.7 0.00023 27.7 9.5 60 17-78 121-183 (316)
258 3tc9_A Hypothetical hydrolase; 86.4 3.2 0.00011 31.0 7.6 59 17-77 138-197 (430)
259 1w6s_A Methanol dehydrogenase 86.1 1.5 5.2E-05 34.5 5.9 51 28-78 484-536 (599)
260 2ad6_A Methanol dehydrogenase 86.1 1.6 5.3E-05 34.0 5.9 47 28-74 475-522 (571)
261 3sre_A PON1, serum paraoxonase 85.7 3.2 0.00011 30.7 7.2 63 15-79 220-287 (355)
262 1tl2_A L10, protein (tachylect 85.5 1.3 4.4E-05 31.3 4.7 55 19-76 91-152 (236)
263 3sre_A PON1, serum paraoxonase 85.4 2.1 7.1E-05 31.7 6.0 61 15-79 164-241 (355)
264 3mbr_X Glutamine cyclotransfer 85.3 7 0.00024 27.4 8.5 63 17-82 151-226 (243)
265 1yiq_A Quinohemoprotein alcoho 85.3 1.4 4.9E-05 35.0 5.4 42 37-79 454-495 (689)
266 1kv9_A Type II quinohemoprotei 85.0 1.4 4.8E-05 34.9 5.2 52 27-78 468-521 (668)
267 4gq2_M Nucleoporin NUP120; bet 84.8 1.9 6.6E-05 35.8 6.2 38 16-54 236-273 (950)
268 3nol_A Glutamine cyclotransfer 84.4 7.9 0.00027 27.5 8.5 56 19-77 46-103 (262)
269 3nok_A Glutaminyl cyclase; bet 84.2 7.9 0.00027 27.7 8.4 63 17-82 182-257 (268)
270 1tl2_A L10, protein (tachylect 83.9 0.86 2.9E-05 32.2 3.2 55 17-75 42-104 (236)
271 3das_A Putative oxidoreductase 83.5 11 0.00038 27.6 9.4 53 16-69 32-90 (347)
272 3p5b_L Low density lipoprotein 82.5 12 0.00042 27.4 9.3 62 16-78 202-265 (400)
273 1ijq_A LDL receptor, low-densi 82.4 9.5 0.00032 26.9 8.3 60 17-76 78-137 (316)
274 2hz6_A Endoplasmic reticulum t 82.3 3.5 0.00012 29.8 6.1 43 29-72 174-217 (369)
275 2ism_A Putative oxidoreductase 82.2 5.7 0.00019 28.7 7.2 59 16-75 75-151 (352)
276 1cru_A Protein (soluble quinop 82.2 14 0.00046 27.9 9.5 53 16-69 27-87 (454)
277 3zwu_A Alkaline phosphatase PH 82.1 10 0.00035 30.1 9.0 60 17-77 477-549 (592)
278 2p9w_A MAL S 1 allergenic prot 82.0 13 0.00045 27.4 10.3 80 19-99 16-108 (334)
279 2ism_A Putative oxidoreductase 82.0 12 0.00041 26.9 9.5 50 16-69 31-85 (352)
280 3hxj_A Pyrrolo-quinoline quino 81.9 2.3 8E-05 29.2 4.8 53 18-75 179-231 (330)
281 3hxj_A Pyrrolo-quinoline quino 81.5 2.9 9.8E-05 28.7 5.2 56 18-76 139-194 (330)
282 3p5b_L Low density lipoprotein 81.4 11 0.00037 27.7 8.6 61 16-76 159-219 (400)
283 3v65_B Low-density lipoprotein 81.2 9.2 0.00031 27.9 8.1 60 16-75 116-175 (386)
284 3mbr_X Glutamine cyclotransfer 81.2 12 0.0004 26.2 9.0 36 18-55 23-60 (243)
285 4fhn_B Nucleoporin NUP120; pro 79.7 1.8 6.2E-05 36.5 4.2 37 17-54 239-275 (1139)
286 3sov_A LRP-6, low-density lipo 79.5 14 0.00047 26.3 8.4 62 16-78 122-185 (318)
287 2xbg_A YCF48-like protein; pho 79.2 14 0.00048 26.1 8.3 61 16-78 205-269 (327)
288 1k3i_A Galactose oxidase precu 78.7 4.7 0.00016 31.6 6.1 57 20-78 460-530 (656)
289 3kya_A Putative phosphatase; s 78.6 12 0.00043 28.9 8.3 63 17-79 140-213 (496)
290 3a9g_A Putative uncharacterize 78.4 9.9 0.00034 27.5 7.4 58 16-76 29-94 (354)
291 3a9g_A Putative uncharacterize 77.6 9.2 0.00031 27.7 7.0 58 17-75 74-151 (354)
292 3v64_C Agrin; beta propeller, 77.5 17 0.00058 26.0 10.0 60 17-76 74-133 (349)
293 3sov_A LRP-6, low-density lipo 77.0 11 0.00038 26.8 7.3 60 17-76 80-139 (318)
294 2xbg_A YCF48-like protein; pho 76.6 17 0.00059 25.6 9.6 56 17-76 164-222 (327)
295 4a2l_A BT_4663, two-component 75.3 27 0.00093 27.7 9.7 59 16-76 406-469 (795)
296 3m0c_C LDL receptor, low-densi 74.1 16 0.00055 29.8 8.2 60 16-76 471-531 (791)
297 2g8s_A Glucose/sorbosone dehyd 73.5 17 0.00059 26.1 7.6 52 15-69 17-76 (353)
298 1cru_A Protein (soluble quinop 69.5 32 0.0011 25.9 8.5 19 17-36 145-163 (454)
299 3m0c_C LDL receptor, low-densi 69.0 46 0.0016 27.1 11.0 61 17-78 515-577 (791)
300 3q7m_A Lipoprotein YFGL, BAMB; 68.7 6.1 0.00021 28.0 4.2 28 29-56 319-346 (376)
301 3f7f_A Nucleoporin NUP120; nuc 68.7 12 0.00043 30.4 6.3 35 18-55 224-258 (729)
302 1k3i_A Galactose oxidase precu 68.1 14 0.00048 28.8 6.4 56 20-77 247-305 (656)
303 3q7m_A Lipoprotein YFGL, BAMB; 67.8 26 0.00089 24.6 7.4 29 28-56 53-81 (376)
304 4a0p_A LRP6, LRP-6, low-densit 67.6 31 0.0011 27.1 8.3 58 16-75 389-449 (628)
305 4a2l_A BT_4663, two-component 67.4 45 0.0015 26.4 9.7 61 16-78 357-425 (795)
306 3s94_A LRP-6, low-density lipo 66.9 24 0.00083 27.7 7.6 60 16-76 84-144 (619)
307 1n7d_A LDL receptor, low-densi 63.0 6.6 0.00022 31.3 3.7 60 17-77 497-558 (699)
308 4a0p_A LRP6, LRP-6, low-densit 63.0 47 0.0016 26.1 8.6 61 16-76 37-97 (628)
309 2ad6_A Methanol dehydrogenase 61.9 18 0.00062 28.0 5.9 26 30-55 318-343 (571)
310 3das_A Putative oxidoreductase 61.6 38 0.0013 24.8 7.3 57 18-77 142-220 (347)
311 3amr_A 3-phytase; beta-propell 59.7 36 0.0012 25.2 6.9 66 16-82 128-205 (355)
312 2g8s_A Glucose/sorbosone dehyd 59.0 45 0.0015 23.9 7.3 60 17-76 272-340 (353)
313 1kv9_A Type II quinohemoprotei 57.9 56 0.0019 25.6 8.2 36 20-56 234-288 (668)
314 2wg3_C Hedgehog-interacting pr 57.1 39 0.0013 25.6 6.9 61 15-76 13-90 (463)
315 2xzh_A Clathrin heavy chain 1; 56.3 60 0.0021 24.2 10.2 46 20-66 264-309 (365)
316 2be1_A Serine/threonine-protei 55.2 54 0.0018 23.9 7.2 28 29-56 11-38 (339)
317 1n7d_A LDL receptor, low-densi 54.6 7.2 0.00025 31.1 2.6 58 17-74 454-511 (699)
318 1w6s_A Methanol dehydrogenase 54.3 28 0.00095 27.3 5.9 27 29-55 324-350 (599)
319 1flg_A Protein (quinoprotein e 53.1 21 0.0007 27.8 4.9 42 37-79 465-506 (582)
320 3ei3_A DNA damage-binding prot 51.3 1.1E+02 0.0039 26.0 9.7 58 17-78 515-579 (1158)
321 3v9f_A Two-component system se 50.9 89 0.0031 24.6 9.0 58 16-76 450-512 (781)
322 3pbp_A Nucleoporin NUP82; beta 50.2 72 0.0025 24.5 7.3 43 37-79 40-86 (452)
323 3sbq_A Nitrous-oxide reductase 49.0 80 0.0027 25.4 7.6 61 18-79 380-455 (638)
324 1sqj_A OXG-RCBH, oligoxylogluc 48.8 79 0.0027 25.5 7.8 53 16-69 15-74 (789)
325 3s94_A LRP-6, low-density lipo 45.5 1.1E+02 0.0037 24.0 8.5 61 16-76 349-409 (619)
326 1bpo_A Protein (clathrin); cla 44.9 1.1E+02 0.0037 23.8 11.0 46 20-66 263-308 (494)
327 2wg3_C Hedgehog-interacting pr 41.7 1.1E+02 0.0038 23.1 9.1 17 59-75 139-155 (463)
328 2cn3_A Xyloglucanase, beta-1,4 39.7 1.3E+02 0.0045 23.8 7.8 58 17-75 24-90 (737)
329 3v9f_A Two-component system se 37.3 1.5E+02 0.0051 23.3 9.9 57 16-75 495-555 (781)
330 2xzh_A Clathrin heavy chain 1; 29.7 1.7E+02 0.006 21.8 11.0 72 20-96 71-145 (365)
331 3a0f_A Xyloglucanase; beta-pro 29.3 2.2E+02 0.0075 22.7 8.6 60 15-75 20-93 (763)
332 3ei3_A DNA damage-binding prot 28.9 2.4E+02 0.0081 24.1 7.9 63 16-79 554-626 (1158)
333 3ott_A Two-component system se 28.5 1.5E+02 0.0053 23.1 6.4 57 18-76 193-249 (758)
334 1f35_A Olfactory marker protei 27.7 1.2E+02 0.0043 19.4 4.9 40 62-101 67-112 (162)
335 3sbq_A Nitrous-oxide reductase 25.7 43 0.0015 26.9 2.7 40 39-78 299-342 (638)
336 1q47_A Semaphorin 3A; beta pro 25.6 2.3E+02 0.0078 21.7 7.1 51 29-79 422-482 (495)
337 4hvt_A Ritya.17583.B, post-pro 25.1 2.6E+02 0.009 22.3 8.6 60 17-78 351-416 (711)
338 3al9_A Plexin-A2; beta-propell 23.5 1.5E+02 0.005 23.1 5.3 62 18-79 402-471 (539)
339 2wl1_A Pyrin, marenostrin; amy 20.8 1.9E+02 0.0064 19.0 5.0 22 35-56 139-160 (191)
340 2be1_A Serine/threonine-protei 20.1 61 0.0021 23.6 2.4 27 29-55 112-138 (339)
No 1
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.66 E-value=1.9e-15 Score=108.36 Aligned_cols=88 Identities=23% Similarity=0.475 Sum_probs=79.4
Q ss_pred CeecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCCCcccccc---cCC
Q 033677 13 HHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSCTYQEATV---IEE 89 (114)
Q Consensus 13 ~~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d~~~~~~~---~~~ 89 (114)
.+.++|++++|+| ++++|++++.||.|++||+++++.+..+..|..+|++++|+|+|++||+++.|+|..+-+ .+.
T Consensus 271 ~~~~~v~~~~~sp-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~~~~ 349 (368)
T 3mmy_A 271 QDIYAVNGIAFHP-VHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQK 349 (368)
T ss_dssp EEECCEEEEEECT-TTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGCCTTS
T ss_pred ccccceEEEEEec-CCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccccccccCCCc
Confidence 4456899999999 999999999999999999999999999999999999999999999999999999987754 367
Q ss_pred CCcEEEEEcCcc
Q 033677 90 PPQIFIIRIDDI 101 (114)
Q Consensus 90 ~~~i~i~~~~~~ 101 (114)
++.|+++++.+.
T Consensus 350 ~~~i~~~~~~~~ 361 (368)
T 3mmy_A 350 KNYIFLRNAAEE 361 (368)
T ss_dssp CCEEEEECCTTT
T ss_pred cceeeehhcCcc
Confidence 778999998764
No 2
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.60 E-value=1.3e-14 Score=107.35 Aligned_cols=65 Identities=9% Similarity=0.050 Sum_probs=60.9
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEe-cCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFEL-PRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~-~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|++|+|+| ++++|++|+.|+.|++||+++++++..+ .+|..+|++|+|||||++||+|+.|
T Consensus 268 ~~~~V~~~~~Sp-dg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D 333 (365)
T 4h5i_A 268 RFKGITSMDVDM-KGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAA 333 (365)
T ss_dssp SCSCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETT
T ss_pred CCCCeEeEEECC-CCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCC
Confidence 356799999999 9999999999999999999999988876 6899999999999999999999999
No 3
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.59 E-value=1.6e-14 Score=103.39 Aligned_cols=95 Identities=25% Similarity=0.523 Sum_probs=82.4
Q ss_pred ceeeeecCCCCCeecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCC-CCCeEEEEECCCCCEEEEEeCCC
Q 033677 2 FRCHPKSKDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRF-SNSVASLSYNHGGQLLAVASSCT 80 (114)
Q Consensus 2 ~~ch~~~~~~~~~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~-~~~v~~v~fspdg~~la~~s~d~ 80 (114)
|++|+....+..|.++|++++|+| ++.+|++++.||.|++||+++++.+..+..+ ..+|++++ |+|++||+++.|.
T Consensus 238 ~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg 314 (342)
T 1yfq_A 238 FRCHRLNLKDTNLAYPVNSIEFSP-RHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDD 314 (342)
T ss_dssp EECCCCCTTCCSSCCCEEEEEECT-TTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECT
T ss_pred eecccccccccccceeEEEEEEcC-CCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCC
Confidence 456665444455677999999999 9999999999999999999999999999888 99999999 9999999999999
Q ss_pred c-ccccc-----cCCCCcEEEEE-cC
Q 033677 81 Y-QEATV-----IEEPPQIFIIR-ID 99 (114)
Q Consensus 81 ~-~~~~~-----~~~~~~i~i~~-~~ 99 (114)
| .++.+ ...++.|||+. ++
T Consensus 315 ~~~~~~~~~~~~~~~~~~i~~~~~~~ 340 (342)
T 1yfq_A 315 TFKTNAAIDQTIELNASSIYIIFDYE 340 (342)
T ss_dssp HHHHCSSSCTTSCCCCCEEEEEETCS
T ss_pred cccccccccccCCCCCceEEEecccc
Confidence 9 87765 58888999999 53
No 4
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.45 E-value=1.4e-12 Score=95.87 Aligned_cols=71 Identities=17% Similarity=0.247 Sum_probs=64.1
Q ss_pred CeecCeEEEEECCCCCCEEEEEeCCCc-EEEEeCCCCeeeEEec-C-CCCCeEEEEECCCCCEEEEEeCC----Ccccc
Q 033677 13 HHLVPVNDVVFSPLSRGAFVTGDNEGY-VAAWDAQSRRRLFELP-R-FSNSVASLSYNHGGQLLAVASSC----TYQEA 84 (114)
Q Consensus 13 ~~~~~V~~v~f~p~~~~~~~t~s~Dg~-I~iwD~~~~~~~~~~~-~-~~~~v~~v~fspdg~~la~~s~d----~~~~~ 84 (114)
.|..+|++|+|+| ++.+|++|+.||+ |++||+++++++..+. + |..+|++++|+|+|++||+++.| .|+..
T Consensus 193 ~h~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 193 AHTNPIKMVRLNR-KSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp CCSSCEEEEEECT-TSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred ccCCceEEEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 3567899999999 9999999999998 9999999999999887 5 89999999999999999999988 46643
No 5
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.43 E-value=1.6e-12 Score=99.33 Aligned_cols=68 Identities=26% Similarity=0.415 Sum_probs=61.9
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC----Cccc
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC----TYQE 83 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d----~~~~ 83 (114)
|..+|++|+|+| ++++|++|+.|+.|++||. +++++..+.+|...|++++|+|||++||+++.| .|+.
T Consensus 15 H~~~V~~~a~sp-dg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~ 86 (577)
T 2ymu_A 15 HSSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR 86 (577)
T ss_dssp CSSCEEEEEECT-TSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCCcEEEEEECC-CCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 467899999999 9999999999999999995 677888899999999999999999999999988 5763
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.42 E-value=2.5e-12 Score=92.26 Aligned_cols=65 Identities=15% Similarity=0.183 Sum_probs=61.3
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|++|+|+| ++.+|++++.||.|++||++++..+..+..+..+|.+++|+|++++|++|+.|
T Consensus 12 h~~~V~~~~fsp-~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d 76 (304)
T 2ynn_A 12 RSDRVKGIDFHP-TEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD 76 (304)
T ss_dssp ECSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT
T ss_pred CCCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCC
Confidence 355699999999 99999999999999999999999999999999999999999999999999988
No 7
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.42 E-value=3e-12 Score=91.18 Aligned_cols=65 Identities=15% Similarity=0.184 Sum_probs=57.5
Q ss_pred eecCeEEEEECCCC-CCEEEEEeCCCcEEEEeCCCCe-----eeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLS-RGAFVTGDNEGYVAAWDAQSRR-----RLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~-~~~~~t~s~Dg~I~iwD~~~~~-----~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|++|+|+| + +++|+|||.||+|++||+.+.+ ....+.+|...|++++|+|+|++|++++.|
T Consensus 37 H~~~V~~v~~sp-~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d 107 (340)
T 4aow_A 37 HNGWVTQIATTP-QFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 107 (340)
T ss_dssp CSSCEEEEEECT-TCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ccCCEEEEEEeC-CCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc
Confidence 467899999999 6 5899999999999999987643 455677899999999999999999999988
No 8
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.39 E-value=5.2e-12 Score=91.85 Aligned_cols=69 Identities=13% Similarity=0.187 Sum_probs=63.7
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC----Cccc
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC----TYQE 83 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d----~~~~ 83 (114)
|..+|++++|+| ++.+|++|+.|++|++||+++++.+..+.+|..+|.+++|+|+|++|++++.| .|+.
T Consensus 75 h~~~V~~~~~~~-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~ 147 (343)
T 2xzm_R 75 HNHFVSDLALSQ-ENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNI 147 (343)
T ss_dssp CSSCEEEEEECS-STTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEES
T ss_pred CCCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEec
Confidence 466899999999 99999999999999999999999999999999999999999999999999988 4653
No 9
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.39 E-value=3.2e-12 Score=95.54 Aligned_cols=68 Identities=28% Similarity=0.517 Sum_probs=63.8
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC----Ccc
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC----TYQ 82 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d----~~~ 82 (114)
|..+|++++|+| ++.+|++|+.||.|++||+.+++....+.+|...|++++|+|+|++||+|+.| .|+
T Consensus 107 h~~~V~~~~~~p-~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd 178 (410)
T 1vyh_C 107 HRSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178 (410)
T ss_dssp CSSCEEEEEECS-SSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEE
T ss_pred cCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEe
Confidence 567899999999 99999999999999999999999999999999999999999999999999988 465
No 10
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.39 E-value=5.3e-12 Score=91.68 Aligned_cols=69 Identities=22% Similarity=0.398 Sum_probs=63.6
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC----Cccc
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC----TYQE 83 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d----~~~~ 83 (114)
|..+|++++|+| ++++|++|+.||.|++||+++++....+.+|...|.+++|+|+|.+|++++.| .|+.
T Consensus 205 h~~~v~~l~~sp-d~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~ 277 (321)
T 3ow8_A 205 HAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDV 277 (321)
T ss_dssp CSSCCCEEEECT-TSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred cCCceeEEEEcC-CCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence 456799999999 99999999999999999999999888999999999999999999999999988 4663
No 11
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.39 E-value=6.1e-12 Score=91.35 Aligned_cols=64 Identities=22% Similarity=0.339 Sum_probs=60.5
Q ss_pred ecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 15 LVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
...|.+++|+| ++++|++|+.||.|++||+++++.+..+..|..+|++++|+|+|++||+|+.|
T Consensus 164 ~~~v~~~~~sp-dg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~d 227 (321)
T 3ow8_A 164 GKFILSIAYSP-DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDD 227 (321)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTT
T ss_pred CceEEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCC
Confidence 44689999999 99999999999999999999999999999999999999999999999999988
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.38 E-value=1.3e-11 Score=88.00 Aligned_cols=65 Identities=18% Similarity=0.308 Sum_probs=61.4
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|++++|+| ++++|++++.||.|++||+.+++....+..|...|.+++|+|++++|++++.|
T Consensus 22 h~~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 86 (312)
T 4ery_A 22 HTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD 86 (312)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred cCCcEEEEEECC-CCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCC
Confidence 467899999999 99999999999999999999999888899999999999999999999999988
No 13
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.36 E-value=1.1e-11 Score=90.22 Aligned_cols=65 Identities=17% Similarity=0.311 Sum_probs=61.5
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|++++|+| ++.+|++|+.||.|++||++++.+...+..|...|++++|+|+|.+||+|+.|
T Consensus 183 h~~~v~~~~~~~-~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d 247 (340)
T 1got_B 183 HTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDD 247 (340)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCC
Confidence 456799999999 99999999999999999999999999999999999999999999999999988
No 14
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.36 E-value=5.3e-12 Score=91.24 Aligned_cols=68 Identities=12% Similarity=0.207 Sum_probs=63.7
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC----Ccc
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC----TYQ 82 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d----~~~ 82 (114)
|..+|++++|+| ++.+|++|+.|++|++||+++++.+..+.+|..+|.+++|+|++.+|++|+.| .|+
T Consensus 64 h~~~v~~~~~s~-dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd 135 (319)
T 3frx_A 64 HSHIVQDCTLTA-DGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWT 135 (319)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred CcccEEEEEECC-CCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 466799999999 99999999999999999999999999999999999999999999999999998 465
No 15
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.36 E-value=1.4e-11 Score=90.76 Aligned_cols=65 Identities=17% Similarity=0.167 Sum_probs=60.7
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCC-CEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGG-QLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg-~~la~~s~d 79 (114)
|..+|++|+|+| ++++|++|+.||.|++||+++++++..+.+|...|++++|+|++ .+|++++.|
T Consensus 126 H~~~V~~v~~sp-dg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D 191 (344)
T 4gqb_B 126 HDDIVSTVSVLS-SGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSED 191 (344)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETT
T ss_pred CCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccc
Confidence 466799999999 99999999999999999999999999999999999999999998 478889888
No 16
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.35 E-value=1.6e-11 Score=87.79 Aligned_cols=66 Identities=14% Similarity=0.207 Sum_probs=62.1
Q ss_pred CeecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 13 HHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 13 ~~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
.|..+|++++|+| ++++|++++.||.|++||+.+++.+..+..|...|++++|+|++++|++++.|
T Consensus 30 ~h~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 95 (369)
T 3zwl_B 30 GHERPLTQVKYNK-EGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSAD 95 (369)
T ss_dssp CCSSCEEEEEECT-TSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EeeceEEEEEEcC-CCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCC
Confidence 3567899999999 99999999999999999999999999999999999999999999999999988
No 17
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.34 E-value=2.4e-11 Score=88.40 Aligned_cols=65 Identities=17% Similarity=0.380 Sum_probs=61.5
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|++++|+| ++++|++|+.||.|++||+.+++.+..+..+...|.+++|+|+|++||+|+.|
T Consensus 54 H~~~v~~~~~s~-d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 118 (340)
T 1got_B 54 HLAKIYAMHWGT-DSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD 118 (340)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCC
Confidence 467899999999 99999999999999999999999898899999999999999999999999988
No 18
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.33 E-value=4.1e-12 Score=93.83 Aligned_cols=65 Identities=17% Similarity=0.313 Sum_probs=61.6
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|++++|+| ++++|++|+.||+|++||+.+++....+..|...|.+++|+|+|++||+|+.|
T Consensus 65 H~~~V~~~~~sp-~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d 129 (380)
T 3iz6_a 65 HSGKVYSLDWTP-EKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLD 129 (380)
T ss_dssp CSSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSS
T ss_pred cccEEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCC
Confidence 467899999999 99999999999999999999999999999999999999999999999999988
No 19
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.33 E-value=7.2e-12 Score=92.18 Aligned_cols=64 Identities=11% Similarity=0.094 Sum_probs=56.8
Q ss_pred eecCeEEEEECCCCC-CEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECC-CCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSR-GAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNH-GGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~-~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fsp-dg~~la~~s~d 79 (114)
|..+|++|+|+| ++ .+|++|+.||+|++||+++++.+.. .+|...|++|+|+| ++.+||+++.|
T Consensus 268 ~~~~v~~l~~sp-~~~~~lasgs~D~~i~iwd~~~~~~~~~-~~H~~~V~~vafsP~d~~~l~s~s~D 333 (357)
T 4g56_B 268 HSQNITGLAYSY-HSSPFLASISEDCTVAVLDADFSEVFRD-LSHRDFVTGVAWSPLDHSKFTTVGWD 333 (357)
T ss_dssp CSSCEEEEEECS-SSSCCEEEEETTSCEEEECTTSCEEEEE-CCCSSCEEEEEECSSSTTEEEEEETT
T ss_pred cceeEEEEEEcC-CCCCEEEEEeCCCEEEEEECCCCcEeEE-CCCCCCEEEEEEeCCCCCEEEEEcCC
Confidence 456799999999 76 6799999999999999999887654 47999999999999 79999999988
No 20
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.33 E-value=3.7e-11 Score=87.16 Aligned_cols=69 Identities=19% Similarity=0.365 Sum_probs=56.1
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCC-------CeeeEEecCCCCCeEEEEECCCCCEEEEEeCC----Ccc
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQS-------RRRLFELPRFSNSVASLSYNHGGQLLAVASSC----TYQ 82 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~-------~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d----~~~ 82 (114)
|..+|++|+|+| ++++|++|+.|+.|++||++. .+.+..+.+|..+|.+++|+|+|++||+|+.| .|+
T Consensus 57 h~~~v~~v~~sp-~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd 135 (330)
T 2hes_X 57 HKKAIRSVAWRP-HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWE 135 (330)
T ss_dssp CCSCEEEEEECT-TSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred ccCCEEEEEECC-CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 677899999999 999999999999999999853 34566778999999999999999999999988 466
Q ss_pred c
Q 033677 83 E 83 (114)
Q Consensus 83 ~ 83 (114)
.
T Consensus 136 ~ 136 (330)
T 2hes_X 136 T 136 (330)
T ss_dssp C
T ss_pred c
Confidence 4
No 21
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.33 E-value=1.2e-11 Score=88.60 Aligned_cols=69 Identities=9% Similarity=0.183 Sum_probs=63.7
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC----Cccc
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC----TYQE 83 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d----~~~~ 83 (114)
|..+|.+++|+| ++++|++|+.|+.|++||+++++.+..+..|...|++++|+|++.+|++|+.| .|+.
T Consensus 54 ~~~~v~~~~~~~-~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~ 126 (304)
T 2ynn_A 54 TETPVRAGKFIA-RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNW 126 (304)
T ss_dssp CSSCEEEEEEEG-GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEG
T ss_pred cCCcEEEEEEeC-CCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEEC
Confidence 356799999999 99999999999999999999999999999999999999999999999999998 4663
No 22
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.32 E-value=1.4e-11 Score=92.08 Aligned_cols=65 Identities=22% Similarity=0.269 Sum_probs=61.6
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|++|+|+| ++++|++|+.||.|++||+.+++++..+.+|...|++++|+|+|.+|++|+.|
T Consensus 149 h~~~V~~v~~~~-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D 213 (410)
T 1vyh_C 149 HTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRD 213 (410)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETT
T ss_pred cCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCC
Confidence 466899999999 99999999999999999999999999999999999999999999999999988
No 23
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.32 E-value=2.3e-11 Score=88.71 Aligned_cols=65 Identities=23% Similarity=0.364 Sum_probs=59.5
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCC--eeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSR--RRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~--~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|++|+|+| ++++|++|+.|+.|++||+..+ +++..+.+|..+|++++|+|+|++||+++.|
T Consensus 60 h~~~v~~~~~sp-~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D 126 (345)
T 3fm0_A 60 HQRTVRKVAWSP-CGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD 126 (345)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred cCCcEEEEEECC-CCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECC
Confidence 467899999999 9999999999999999999876 4567788999999999999999999999988
No 24
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.30 E-value=7.6e-12 Score=95.51 Aligned_cols=64 Identities=30% Similarity=0.430 Sum_probs=58.9
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|++|+|+| ++++|++++.||.|++||. +++.+..+.+|..+|++++|+|||++|++++.|
T Consensus 507 h~~~v~~l~~s~-dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D 570 (577)
T 2ymu_A 507 HSSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSD 570 (577)
T ss_dssp CSSCEEEEEECT-TSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred CCCCEEEEEEcC-CCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC
Confidence 456799999999 9999999999999999996 577788889999999999999999999999988
No 25
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.30 E-value=4.7e-11 Score=86.60 Aligned_cols=65 Identities=22% Similarity=0.223 Sum_probs=56.4
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCC----CeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQS----RRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~----~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|++|+|+| ++++|++|+.|+.|++||++. .+++..+..|...|++++|+|++.+||+++.|
T Consensus 106 h~~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D 174 (330)
T 2hes_X 106 HENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD 174 (330)
T ss_dssp ---CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT
T ss_pred CCCcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC
Confidence 467899999999 999999999999999999953 24566788999999999999999999999988
No 26
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.30 E-value=2.9e-11 Score=85.31 Aligned_cols=64 Identities=20% Similarity=0.366 Sum_probs=57.4
Q ss_pred ecCeEEEEECCCCCCEEEEEe--CCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 15 LVPVNDVVFSPLSRGAFVTGD--NEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s--~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
..++..+.|.| .+..+++++ .||.|++||+++++.+..+.+|..+|++++|+|||++||+|+.|
T Consensus 240 ~~~v~~~~~~~-~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D 305 (318)
T 4ggc_A 240 HSQVCSILWSP-HYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAAD 305 (318)
T ss_dssp SSCEEEEEEET-TTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred eeeeeeeeecc-cccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecC
Confidence 45688999999 777766544 79999999999999999999999999999999999999999988
No 27
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.30 E-value=5.4e-11 Score=84.75 Aligned_cols=65 Identities=25% Similarity=0.367 Sum_probs=61.4
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|++++|+| ++++|++++.||.|++||+++++.+..+..|...|.+++|+|++.+|++++.|
T Consensus 64 h~~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 128 (312)
T 4ery_A 64 HKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 128 (312)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT
T ss_pred CCCceEEEEEcC-CCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC
Confidence 456799999999 99999999999999999999999999999999999999999999999999988
No 28
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.29 E-value=4e-11 Score=84.52 Aligned_cols=65 Identities=17% Similarity=0.171 Sum_probs=58.3
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCC----eeeEEecCCCCCeEEEEECC--CCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSR----RRLFELPRFSNSVASLSYNH--GGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~----~~~~~~~~~~~~v~~v~fsp--dg~~la~~s~d 79 (114)
|..+|++++|+| ++++|++|+.||.|++||+.++ +....+..|..+|++++|+| ++++|++++.|
T Consensus 10 H~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d 80 (351)
T 3f3f_A 10 HDDLVHDVVYDF-YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD 80 (351)
T ss_dssp CSSCEEEEEECS-SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred cccceeEEEEcC-CCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC
Confidence 466799999999 9999999999999999999876 45566778999999999999 69999999988
No 29
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.29 E-value=1.9e-11 Score=89.67 Aligned_cols=64 Identities=23% Similarity=0.268 Sum_probs=60.5
Q ss_pred ecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 15 LVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
..++.+++|+| ++.+|++|+.|+.|++||+.+++.+..+.+|...|++++|+|||++||+|+.|
T Consensus 284 ~~~~~~~~~s~-~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D 347 (354)
T 2pbi_B 284 IFGASSVDFSL-SGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWD 347 (354)
T ss_dssp CSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred ccceeEEEEeC-CCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCC
Confidence 45789999999 99999999999999999999999888899999999999999999999999988
No 30
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.29 E-value=3.8e-11 Score=88.20 Aligned_cols=66 Identities=17% Similarity=0.257 Sum_probs=62.0
Q ss_pred CeecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 13 HHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 13 ~~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
.|..+|++++|+| ++.+|++++.||.|++||+++++.+..+..|...|++++|+|++.+|++++.|
T Consensus 137 ~h~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 202 (420)
T 3vl1_A 137 AHVSEITKLKFFP-SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLD 202 (420)
T ss_dssp SSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETT
T ss_pred cccCccEEEEECC-CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCC
Confidence 3567899999999 99999999999999999999999898999999999999999999999999988
No 31
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.29 E-value=4.6e-11 Score=85.37 Aligned_cols=69 Identities=17% Similarity=0.260 Sum_probs=60.5
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCC--eeeEEecCCCCCeEEEEECCC--CCEEEEEeCC----Cccc
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSR--RRLFELPRFSNSVASLSYNHG--GQLLAVASSC----TYQE 83 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~--~~~~~~~~~~~~v~~v~fspd--g~~la~~s~d----~~~~ 83 (114)
|..+|++++|+| ++++|++|+.|+.|++||+.+. +.+..+.+|..+|.+++|+|+ |++||+|+.| .|+.
T Consensus 8 h~~~V~~~~~s~-~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~ 84 (297)
T 2pm7_B 8 HNEMIHDAVMDY-YGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKE 84 (297)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEB
T ss_pred CcCceEEEEECC-CCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEc
Confidence 466799999999 9999999999999999999753 567788899999999999874 8999999988 5764
No 32
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.28 E-value=7.3e-11 Score=86.89 Aligned_cols=66 Identities=23% Similarity=0.272 Sum_probs=57.0
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCC-CEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGG-QLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg-~~la~~s~d 79 (114)
+...+++++|+|.++++|++|+.||.|++||+++++++..+.+|...|++++|+|+| ++||+|+.|
T Consensus 213 ~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D 279 (344)
T 4gqb_B 213 PGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSED 279 (344)
T ss_dssp -CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETT
T ss_pred eeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCC
Confidence 355689999999445789999999999999999999999999999999999999998 579999988
No 33
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.27 E-value=3.4e-11 Score=84.87 Aligned_cols=65 Identities=23% Similarity=0.338 Sum_probs=58.3
Q ss_pred eecCeEEEEECCCCC----CEEEEEeCCCcEEEEeCCCC-----------------------------------------
Q 033677 14 HLVPVNDVVFSPLSR----GAFVTGDNEGYVAAWDAQSR----------------------------------------- 48 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~----~~~~t~s~Dg~I~iwD~~~~----------------------------------------- 48 (114)
|..+|++++|+| ++ ++|++++.||.|++||++++
T Consensus 213 h~~~i~~~~~~p-~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (351)
T 3f3f_A 213 HKSLIRSISWAP-SIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQ 291 (351)
T ss_dssp CCSCEEEEEECC-CSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------C
T ss_pred CCcceeEEEECC-CCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeec
Confidence 467899999999 87 79999999999999999875
Q ss_pred -----eeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 49 -----RRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 49 -----~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
+.+..+..|...|++++|+|+|++||+++.|
T Consensus 292 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 327 (351)
T 3f3f_A 292 SNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDD 327 (351)
T ss_dssp CSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETT
T ss_pred ccccccEEEEEecccccEEEEEEcCCCCEEEEecCC
Confidence 5666677899999999999999999999988
No 34
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.27 E-value=4.4e-11 Score=87.75 Aligned_cols=65 Identities=17% Similarity=0.224 Sum_probs=60.7
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|++++|+| ++.+|++|+.||.|++||..+++....+..+...|.+++|+|+|.+||+++.|
T Consensus 63 H~~~V~~~~~s~-d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d 127 (354)
T 2pbi_B 63 HGNKVLCMDWCK-DKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLD 127 (354)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTT
T ss_pred CCCeEEEEEECC-CCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCC
Confidence 467899999999 99999999999999999999998888888888899999999999999999988
No 35
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.27 E-value=2.1e-11 Score=88.51 Aligned_cols=67 Identities=10% Similarity=0.173 Sum_probs=60.1
Q ss_pred ecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeee-EEecC-CCCCeEEEEECCCCCEEEEEeCC---Ccc
Q 033677 15 LVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRL-FELPR-FSNSVASLSYNHGGQLLAVASSC---TYQ 82 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~-~~~~~-~~~~v~~v~fspdg~~la~~s~d---~~~ 82 (114)
..+|++++|+| ++.+|++|+.||.|++||+++++.+ ..+.. |..+|++++|+|+|.+|++++.+ .|+
T Consensus 170 ~~~i~~~~~~p-dg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd 241 (343)
T 3lrv_A 170 DVEYSSGVLHK-DSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFD 241 (343)
T ss_dssp SCCCCEEEECT-TSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEE
T ss_pred CCceEEEEECC-CCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEE
Confidence 44699999999 9999999999999999999999877 67777 89999999999999999999955 465
No 36
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.27 E-value=4.5e-11 Score=88.22 Aligned_cols=65 Identities=28% Similarity=0.381 Sum_probs=57.2
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCC-------CCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFS-------NSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~-------~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|++|+|+| ++.+|++|+.||+|++||++++..+..+..+. ..|++++|+|+|++|++|+.|
T Consensus 248 h~~~v~~v~~~p-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d 319 (380)
T 3iz6_a 248 HEGDINSVKFFP-DGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN 319 (380)
T ss_dssp CSSCCCEEEECT-TSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT
T ss_pred cCCCeEEEEEec-CCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC
Confidence 466799999999 99999999999999999999998887775432 248999999999999999988
No 37
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.26 E-value=2.9e-11 Score=94.52 Aligned_cols=68 Identities=21% Similarity=0.326 Sum_probs=61.8
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEec-------CCCCCeEEEEECCCCCEEEEEeCC----Ccc
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELP-------RFSNSVASLSYNHGGQLLAVASSC----TYQ 82 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~-------~~~~~v~~v~fspdg~~la~~s~d----~~~ 82 (114)
|..+|++|+|+| ++++|++++.||+|++||+.+++.+..+. +|...|.+++|+|+|++||+++.| .|+
T Consensus 189 H~~~V~~v~fsp-dg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd 267 (611)
T 1nr0_A 189 HTKFVHSVRYNP-DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWN 267 (611)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccCceEEEEECC-CCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 466799999999 99999999999999999999998887774 688999999999999999999998 476
No 38
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.26 E-value=9.3e-11 Score=86.89 Aligned_cols=65 Identities=25% Similarity=0.448 Sum_probs=61.2
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC----Ccc
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC----TYQ 82 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d----~~~ 82 (114)
.|++++|+| ++++|++|+.||.|++||+++++.+..+.+|...|.+++|+|+|++|++++.| .|+
T Consensus 125 ~v~~v~~s~-dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd 193 (393)
T 1erj_A 125 YIRSVCFSP-DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWD 193 (393)
T ss_dssp BEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEE
Confidence 489999999 99999999999999999999999999999999999999999999999999988 465
No 39
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.25 E-value=6.8e-11 Score=85.37 Aligned_cols=68 Identities=13% Similarity=0.148 Sum_probs=59.0
Q ss_pred eecCeEEEEECCCCC-CEEEEEeCCCcEEEEeCCC-----CeeeEEecCCCCCeEEEEECCCCCEEEEEeCC----Ccc
Q 033677 14 HLVPVNDVVFSPLSR-GAFVTGDNEGYVAAWDAQS-----RRRLFELPRFSNSVASLSYNHGGQLLAVASSC----TYQ 82 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~-~~~~t~s~Dg~I~iwD~~~-----~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d----~~~ 82 (114)
|..+|++|+|+| ++ ++|++|+.|++|++||+.. +..+..+.+|...|++++|+|+|++|++|+.| .|+
T Consensus 16 H~~~V~~l~~~~-~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd 93 (319)
T 3frx_A 16 HNGWVTSLATSA-GQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWD 93 (319)
T ss_dssp CSSCEEEEEECS-SCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccceEEEEEccC-CCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 467799999999 65 8999999999999999864 23456788999999999999999999999988 576
No 40
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.25 E-value=6.8e-11 Score=84.49 Aligned_cols=66 Identities=17% Similarity=0.265 Sum_probs=58.4
Q ss_pred CeecCeEEEEECCCC---CCEEEEEeCCCcEEEEeCCC-Ceee-EEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 13 HHLVPVNDVVFSPLS---RGAFVTGDNEGYVAAWDAQS-RRRL-FELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 13 ~~~~~V~~v~f~p~~---~~~~~t~s~Dg~I~iwD~~~-~~~~-~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
.|..+|++|+|+| + +++|++|+.||.|++||+++ +..+ ..+..|..+|++++|+|++++|++++.|
T Consensus 37 ~h~~~v~~~~~~~-~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 107 (368)
T 3mmy_A 37 SPDDSIGCLSFSP-PTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD 107 (368)
T ss_dssp CCSSCEEEEEECC-TTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCceEEEEEcC-CCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC
Confidence 3567899999999 7 58999999999999999997 4444 6677899999999999999999999988
No 41
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.24 E-value=2.4e-11 Score=87.71 Aligned_cols=65 Identities=18% Similarity=0.209 Sum_probs=56.9
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCe--eeEEecCCCCCeEEEEECC--CCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRR--RLFELPRFSNSVASLSYNH--GGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~--~~~~~~~~~~~v~~v~fsp--dg~~la~~s~d 79 (114)
|..+|++|+|+| ++++|++|+.|++|++||++++. .+..+.+|..+|.+++|+| +|++||+++.|
T Consensus 12 H~~~V~~v~~s~-~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D 80 (316)
T 3bg1_A 12 HEDMIHDAQMDY-YGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD 80 (316)
T ss_dssp --CCEEEEEECG-GGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT
T ss_pred ccCeEEEeeEcC-CCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC
Confidence 467899999999 99999999999999999998764 4567889999999999986 48999999988
No 42
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.24 E-value=2.8e-11 Score=90.67 Aligned_cols=68 Identities=12% Similarity=0.189 Sum_probs=56.5
Q ss_pred ecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeee--EEecCCCCCeEEEEECC-CCCEEEEEeCC----Ccc
Q 033677 15 LVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRL--FELPRFSNSVASLSYNH-GGQLLAVASSC----TYQ 82 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~--~~~~~~~~~v~~v~fsp-dg~~la~~s~d----~~~ 82 (114)
...|++|+|+|.++++|++|+.||.|++||+.++... ..+.+|..+|++|+|+| ++.+|++++.| .|+
T Consensus 119 ~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd 193 (435)
T 4e54_B 119 DRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQD 193 (435)
T ss_dssp SSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEE
T ss_pred CCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEee
Confidence 3459999999944579999999999999999876543 34457999999999998 68999999988 465
No 43
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.24 E-value=8.8e-11 Score=85.63 Aligned_cols=65 Identities=23% Similarity=0.317 Sum_probs=58.3
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCC---eeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSR---RRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~---~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|++|+|+| ++++|++|+.|+.|++||++++ .++..+..|...|++++|+|++++||+++.|
T Consensus 104 h~~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d 171 (345)
T 3fm0_A 104 HENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYD 171 (345)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETT
T ss_pred CCCCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCC
Confidence 466799999999 9999999999999999999875 3455677899999999999999999999988
No 44
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.22 E-value=2.4e-10 Score=81.73 Aligned_cols=66 Identities=15% Similarity=0.256 Sum_probs=60.0
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEe---cCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFEL---PRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~---~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|++++|+|.++++|++++.||.|++||+++++.+..+ ..+...|.+++|+|++.+|++++.|
T Consensus 114 ~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 182 (366)
T 3k26_A 114 HGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD 182 (366)
T ss_dssp CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCC
Confidence 46679999999955689999999999999999999988887 6789999999999999999999987
No 45
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.22 E-value=5.3e-11 Score=93.97 Aligned_cols=68 Identities=21% Similarity=0.283 Sum_probs=63.6
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC----Ccc
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC----TYQ 82 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d----~~~ 82 (114)
|..+|++|+|+| ++++|++|+.||.|++||+.++.....+.+|...|.+++|+|++++|++++.| .|+
T Consensus 429 h~~~v~~v~~s~-~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd 500 (694)
T 3dm0_A 429 HSHFVEDVVLSS-DGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWN 500 (694)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCcEEEEEECC-CCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEE
Confidence 467799999999 99999999999999999999999999999999999999999999999999988 576
No 46
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.22 E-value=1.4e-10 Score=85.58 Aligned_cols=65 Identities=15% Similarity=0.386 Sum_probs=60.4
Q ss_pred eecCeEEEEECCCCC-CEEEEEeCCCcEEEEeCCCCeeeEEe--cCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSR-GAFVTGDNEGYVAAWDAQSRRRLFEL--PRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~-~~~~t~s~Dg~I~iwD~~~~~~~~~~--~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|++|+|+| ++ ++|++++.||.|++||+++++.+..+ ..|...|++++|+|+|.+|++++.|
T Consensus 130 h~~~v~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 197 (402)
T 2aq5_A 130 HTKRVGIVAWHP-TAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD 197 (402)
T ss_dssp CSSCEEEEEECS-SBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT
T ss_pred CCCeEEEEEECc-CCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC
Confidence 467899999999 86 79999999999999999999999888 7899999999999999999999988
No 47
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.22 E-value=1.4e-10 Score=90.68 Aligned_cols=68 Identities=25% Similarity=0.395 Sum_probs=62.2
Q ss_pred eecCeEEEEECCCCCC-EEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC----Ccc
Q 033677 14 HLVPVNDVVFSPLSRG-AFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC----TYQ 82 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~-~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d----~~~ 82 (114)
|..+|++++|+| ++. .|++|+.|++|++||..++++...+.+|...|++++|+|||++||+++.| .|+
T Consensus 146 h~~~v~~v~f~p-~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd 218 (611)
T 1nr0_A 146 QARAMNSVDFKP-SRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYN 218 (611)
T ss_dssp CSSCEEEEEECS-SSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCCCceEEEECC-CCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEE
Confidence 467899999999 775 79999999999999999988888899999999999999999999999998 465
No 48
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.21 E-value=1.6e-10 Score=91.52 Aligned_cols=65 Identities=15% Similarity=0.186 Sum_probs=61.3
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|.+++|+| ++.+|++++.||.|++||+.+++.+..+..|..+|++++|+|+|++||+++.|
T Consensus 12 h~~~v~~i~~sp-~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 76 (814)
T 3mkq_A 12 RSDRVKGIDFHP-TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD 76 (814)
T ss_dssp ECSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT
T ss_pred CCCceEEEEECC-CCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCC
Confidence 456799999999 99999999999999999999999999999999999999999999999999987
No 49
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.21 E-value=7.5e-11 Score=89.51 Aligned_cols=65 Identities=17% Similarity=0.181 Sum_probs=58.9
Q ss_pred eecCeEEEEECCCC-CCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLS-RGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~-~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|++|+|+| + +++|++++.||.|++||++++..+.....|...|++++|+|+|++||+|+.|
T Consensus 148 h~~~V~~v~~~p-~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~d 213 (434)
T 2oit_A 148 AGGMVIDMKWNP-TVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQN 213 (434)
T ss_dssp GGGSEEEEEECS-SCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETT
T ss_pred CCCceEEEEECC-CCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCC
Confidence 567899999999 6 7899999999999999999987766666788899999999999999999988
No 50
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.21 E-value=9.5e-11 Score=84.21 Aligned_cols=65 Identities=17% Similarity=0.243 Sum_probs=58.5
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCC--CCeeeEEecCCCCCeEEEEECCC--CCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQ--SRRRLFELPRFSNSVASLSYNHG--GQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~--~~~~~~~~~~~~~~v~~v~fspd--g~~la~~s~d 79 (114)
|..+|++++|+| ++++|++|+.||.|++||+. +.+.+..+..|..+|++++|+|+ +.+|++++.|
T Consensus 10 h~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d 78 (379)
T 3jrp_A 10 HNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD 78 (379)
T ss_dssp CCCCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred CcccEEEEEEcC-CCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC
Confidence 456799999999 99999999999999999998 55666778899999999999987 9999999988
No 51
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.21 E-value=1.4e-10 Score=81.44 Aligned_cols=64 Identities=19% Similarity=0.185 Sum_probs=59.7
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|++++| | ++++|++++.||.|++||+.++.....+..+...|++++|+|++++|++++.|
T Consensus 17 h~~~v~~~~~-~-~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 80 (313)
T 3odt_A 17 HDQDVRDVVA-V-DDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKD 80 (313)
T ss_dssp CSSCEEEEEE-E-ETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETT
T ss_pred CCCCcEEEEe-c-CCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCC
Confidence 4667999999 8 89999999999999999999998888888899999999999999999999988
No 52
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.20 E-value=2.2e-10 Score=87.47 Aligned_cols=66 Identities=21% Similarity=0.191 Sum_probs=61.4
Q ss_pred CeecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecC-CCCCeEEEEECC----------CCCEEEEEeCC
Q 033677 13 HHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPR-FSNSVASLSYNH----------GGQLLAVASSC 79 (114)
Q Consensus 13 ~~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~-~~~~v~~v~fsp----------dg~~la~~s~d 79 (114)
.|..+|++++|+| ++++|++++.||.|++||+.+++.+..+.. |..+|++++|+| ++++||+++.|
T Consensus 486 ~~~~~v~~~~~s~-~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~d 562 (615)
T 1pgu_A 486 PLRAKPSYISISP-SETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLD 562 (615)
T ss_dssp CCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETT
T ss_pred CccCceEEEEECC-CCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCC
Confidence 3567899999999 999999999999999999999998888877 999999999999 99999999988
No 53
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.20 E-value=2.3e-10 Score=94.67 Aligned_cols=65 Identities=14% Similarity=0.267 Sum_probs=62.1
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|++++|+| ++.+|++|+.||.|++||+.+++.+..+.+|...|++++|+|+|++||+++.|
T Consensus 614 h~~~v~~~~~s~-~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 678 (1249)
T 3sfz_A 614 HTDAVYHACFSQ-DGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSAD 678 (1249)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ccccEEEEEECC-CCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCC
Confidence 567899999999 99999999999999999999999999999999999999999999999999988
No 54
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.20 E-value=1.1e-10 Score=85.74 Aligned_cols=66 Identities=17% Similarity=0.180 Sum_probs=60.6
Q ss_pred CeecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCC-EEEEEeCC
Q 033677 13 HHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQ-LLAVASSC 79 (114)
Q Consensus 13 ~~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~-~la~~s~d 79 (114)
.|..+|++|+|+| ++++|++|+.||.|++||+++++.+..+..|...|++++|+|++. ++++++.|
T Consensus 137 ~h~~~V~~v~~sp-dg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~d 203 (357)
T 4g56_B 137 EHDDIVKTLSVFS-DGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGED 203 (357)
T ss_dssp CCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETT
T ss_pred CCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccC
Confidence 3567899999999 999999999999999999999999999999999999999999885 78888877
No 55
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.20 E-value=1.1e-10 Score=83.97 Aligned_cols=65 Identities=11% Similarity=0.233 Sum_probs=60.0
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCe--eeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRR--RLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~--~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|++++|+| ++++|++++.||.|++||+.+++ .+..+..|...|++++|+|++++|++++.|
T Consensus 7 ~~~~i~~~~~s~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d 73 (372)
T 1k8k_C 7 LVEPISCHAWNK-DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD 73 (372)
T ss_dssp CSSCCCEEEECT-TSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT
T ss_pred cCCCeEEEEECC-CCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC
Confidence 356799999999 99999999999999999999887 788888999999999999999999999987
No 56
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.20 E-value=2.7e-10 Score=80.33 Aligned_cols=59 Identities=25% Similarity=0.323 Sum_probs=50.7
Q ss_pred eEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEec--CCCCCeEEEEECCCCCEEEEEeCC
Q 033677 18 VNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELP--RFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~--~~~~~v~~v~fspdg~~la~~s~d 79 (114)
++.|+|++ ++ +|++| .|++|++||+.+++++..+. .|...|++++|+|+|++||+|+.|
T Consensus 28 ~~~l~WS~-~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D 88 (318)
T 4ggc_A 28 LNLVDWSS-GN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS 88 (318)
T ss_dssp CBCEEECT-TS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT
T ss_pred ceEEEECC-CC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC
Confidence 57799999 64 66665 59999999999998887665 567789999999999999999988
No 57
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.19 E-value=3.9e-10 Score=81.90 Aligned_cols=69 Identities=14% Similarity=0.150 Sum_probs=58.4
Q ss_pred eecCeEEEEE-----CCCCCCEEEEEeCCCcEEEEeCCCC-------eeeEEecCCCCCeEEEEECCCCCEEEEEeCC--
Q 033677 14 HLVPVNDVVF-----SPLSRGAFVTGDNEGYVAAWDAQSR-------RRLFELPRFSNSVASLSYNHGGQLLAVASSC-- 79 (114)
Q Consensus 14 ~~~~V~~v~f-----~p~~~~~~~t~s~Dg~I~iwD~~~~-------~~~~~~~~~~~~v~~v~fspdg~~la~~s~d-- 79 (114)
|..+|++|+| +|.++.+|++|+.|++|++||+.+. .....+.+|...|++++|+|++.+|++|+.|
T Consensus 20 H~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~ 99 (343)
T 2xzm_R 20 HSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKT 99 (343)
T ss_dssp CSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSE
T ss_pred chhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCc
Confidence 4667999999 5536789999999999999999753 3456678999999999999999999999988
Q ss_pred --Ccc
Q 033677 80 --TYQ 82 (114)
Q Consensus 80 --~~~ 82 (114)
.|+
T Consensus 100 v~lwd 104 (343)
T 2xzm_R 100 LRLWD 104 (343)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 465
No 58
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.19 E-value=2.8e-10 Score=81.37 Aligned_cols=65 Identities=9% Similarity=0.104 Sum_probs=59.6
Q ss_pred eecCeEEEEECCCC----CCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECC-CCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLS----RGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNH-GGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~----~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fsp-dg~~la~~s~d 79 (114)
+...|++++|+| + +.+|++|+.||.|++||+.+++.+..+..|..+|++++|+| ++.+|++++.|
T Consensus 68 ~~~~v~~~~~~~-~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d 137 (366)
T 3k26_A 68 ADENFYTCAWTY-DSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKD 137 (366)
T ss_dssp TTCCEEEEEEEE-CTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETT
T ss_pred CCCcEEEEEecc-CCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCC
Confidence 345699999999 7 56899999999999999999999999999999999999999 89999999987
No 59
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.19 E-value=2.8e-10 Score=83.95 Aligned_cols=67 Identities=18% Similarity=0.383 Sum_probs=59.6
Q ss_pred CeecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCC-------eeeEEecCCCCCeEEEEECCCC-CEEEEEeCC
Q 033677 13 HHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSR-------RRLFELPRFSNSVASLSYNHGG-QLLAVASSC 79 (114)
Q Consensus 13 ~~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~-------~~~~~~~~~~~~v~~v~fspdg-~~la~~s~d 79 (114)
.|..+|++++|+|.++++|++|+.||.|++||+.++ +.+..+.+|...|++++|+|++ .+|++++.|
T Consensus 79 ~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d 153 (402)
T 2aq5_A 79 GHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD 153 (402)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT
T ss_pred cCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC
Confidence 357789999999955689999999999999999987 5677788999999999999998 699999988
No 60
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.18 E-value=2.9e-10 Score=81.16 Aligned_cols=65 Identities=28% Similarity=0.348 Sum_probs=56.8
Q ss_pred eecCeEEEEECCCC--CCEEEEEeCCCcEEEEeCCCCe--eeEEecCCCCCeEEEEECCC--CCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLS--RGAFVTGDNEGYVAAWDAQSRR--RLFELPRFSNSVASLSYNHG--GQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~--~~~~~t~s~Dg~I~iwD~~~~~--~~~~~~~~~~~v~~v~fspd--g~~la~~s~d 79 (114)
|..+|++|+|+| + +++|++|+.||+|++||+++++ .+..+..|...|.+++|+|+ |.+||+++.|
T Consensus 52 H~~~V~~v~~s~-~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d 122 (297)
T 2pm7_B 52 HEGPVWRVDWAH-PKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD 122 (297)
T ss_dssp CSSCEEEEEECC-GGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred ccCCeEEEEecC-CCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC
Confidence 567899999986 4 6899999999999999998763 45667788999999999998 8999999988
No 61
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.18 E-value=1.2e-10 Score=95.60 Aligned_cols=64 Identities=9% Similarity=0.172 Sum_probs=57.4
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCe--------------------------------------------
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRR-------------------------------------------- 49 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~-------------------------------------------- 49 (114)
|..+|++|+|+| ++.+|++|+.||+|++||+.+++
T Consensus 487 h~~~V~svafsp-dg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 565 (902)
T 2oaj_A 487 KELAVDKISFAA-ETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGF 565 (902)
T ss_dssp SSCCEEEEEEET-TTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEE
T ss_pred CCCceeEEEecC-CCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcc
Confidence 456899999999 99999999999999999997652
Q ss_pred -eeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 50 -RLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 50 -~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
++..+.+|..+|++|+||||| +||+|+.|
T Consensus 566 ~~~~~l~~h~~~V~svafSpdG-~lAsgs~D 595 (902)
T 2oaj_A 566 MPSTAVHANKGKTSAINNSNIG-FVGIAYAA 595 (902)
T ss_dssp EEEEEECCCSCSEEEEEECBTS-EEEEEETT
T ss_pred ceeEEEEcCCCcEEEEEecCCc-EEEEEeCC
Confidence 356677899999999999999 99999998
No 62
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.18 E-value=1e-10 Score=87.61 Aligned_cols=65 Identities=18% Similarity=0.245 Sum_probs=55.7
Q ss_pred eecCeEEEEECCCCC-CEEEEEeCCCcEEEEeCCCCeeeEEe---cCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSR-GAFVTGDNEGYVAAWDAQSRRRLFEL---PRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~-~~~~t~s~Dg~I~iwD~~~~~~~~~~---~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|++|+|+| ++ .+|++|+.|+.|++||+++.+....+ ..|..+|++++|+|+|.+|++++.|
T Consensus 249 h~~~v~~v~~~p-~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D 317 (435)
T 4e54_B 249 HKKKVTHVALNP-CCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQK 317 (435)
T ss_dssp CSSCEEEEEECT-TCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESS
T ss_pred ccceEEeeeecC-CCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCC
Confidence 466899999999 66 58999999999999999886544333 4688999999999999999999988
No 63
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.17 E-value=2.9e-10 Score=83.91 Aligned_cols=70 Identities=13% Similarity=0.194 Sum_probs=60.1
Q ss_pred CCCCCeecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCe-----------eeEEecCCC------------CCeEEEE
Q 033677 9 KDGRHHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRR-----------RLFELPRFS------------NSVASLS 65 (114)
Q Consensus 9 ~~~~~~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~-----------~~~~~~~~~------------~~v~~v~ 65 (114)
.+..++..+|++|+|+| ++++|++|+.||.|++||+.++. ....+.+|. ..|++++
T Consensus 22 ~~~~~~~~~V~~v~~s~-~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~ 100 (447)
T 3dw8_B 22 DDDVAEADIISTVEFNH-SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIR 100 (447)
T ss_dssp SSCCCGGGSEEEEEECS-SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEE
T ss_pred cccccccCcEEEEEECC-CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEE
Confidence 34456778999999999 99999999999999999999776 466778887 8899999
Q ss_pred ECCCC--CEEEEEeCC
Q 033677 66 YNHGG--QLLAVASSC 79 (114)
Q Consensus 66 fspdg--~~la~~s~d 79 (114)
|+|++ .+|++++.|
T Consensus 101 ~~~~~~~~~l~s~s~d 116 (447)
T 3dw8_B 101 WLPQKNAAQFLLSTND 116 (447)
T ss_dssp ECCCCSSSEEEEEECS
T ss_pred EcCCCCcceEEEeCCC
Confidence 99998 789999888
No 64
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.17 E-value=3.8e-10 Score=82.10 Aligned_cols=65 Identities=18% Similarity=0.311 Sum_probs=60.6
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEec------CC---------------CCCeEEEEECCCC--
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELP------RF---------------SNSVASLSYNHGG-- 70 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~------~~---------------~~~v~~v~fspdg-- 70 (114)
|..+|.+++|+| ++++|++++.||.|++||+++++.+..+. .+ ..+|++++|+|+|
T Consensus 290 ~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~ 368 (397)
T 1sq9_A 290 HSSWVMSLSFND-SGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWR 368 (397)
T ss_dssp BSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTS
T ss_pred cCCcEEEEEECC-CCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccc
Confidence 567899999999 99999999999999999999999999888 77 8999999999998
Q ss_pred --------CEEEEEeCC
Q 033677 71 --------QLLAVASSC 79 (114)
Q Consensus 71 --------~~la~~s~d 79 (114)
++|++++.|
T Consensus 369 ~~~~~~~~~~l~s~~~d 385 (397)
T 1sq9_A 369 SGMGADLNESLCCVCLD 385 (397)
T ss_dssp BSTTCTTSCEEEEEETT
T ss_pred ccccccccceEEEecCC
Confidence 799999988
No 65
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.17 E-value=1.6e-10 Score=84.42 Aligned_cols=66 Identities=17% Similarity=0.242 Sum_probs=60.6
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCC-CEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGG-QLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg-~~la~~s~d 79 (114)
|..+|++++|+|.++.+|++++.||.|++||+++++.+..+..|...|++++|+|++ .+|++++.|
T Consensus 261 ~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d 327 (416)
T 2pm9_A 261 HQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFD 327 (416)
T ss_dssp CSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSS
T ss_pred ccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecC
Confidence 567899999998556899999999999999999999999999999999999999999 899999888
No 66
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.17 E-value=4.1e-10 Score=83.40 Aligned_cols=66 Identities=20% Similarity=0.232 Sum_probs=56.4
Q ss_pred CeecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCC------------eeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 13 HHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSR------------RRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 13 ~~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~------------~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
.|..+|++|+|+| ++.+|++|+.||.|++||+++. .+...+.+|...|.+++|+|++.+|++|+.|
T Consensus 254 ~h~~~v~~v~~~~-~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D 331 (393)
T 1erj_A 254 GHKDSVYSVVFTR-DGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKD 331 (393)
T ss_dssp CCSSCEEEEEECT-TSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETT
T ss_pred CCCCCEEEEEECC-CCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCC
Confidence 3567899999999 9999999999999999999763 3445667889999999999999999999988
No 67
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.17 E-value=5.7e-10 Score=81.39 Aligned_cols=64 Identities=19% Similarity=0.308 Sum_probs=56.6
Q ss_pred eecCeEEEEECCCCCC-EEEEEeCCCcEEEEeCCC----CeeeEEecCCCCCeEEEEECC-CCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRG-AFVTGDNEGYVAAWDAQS----RRRLFELPRFSNSVASLSYNH-GGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~-~~~t~s~Dg~I~iwD~~~----~~~~~~~~~~~~~v~~v~fsp-dg~~la~~s~d 79 (114)
|..+|.+++|+| ++. +|++++.||.|++||+++ +..+..+ .+...|++++|+| +|++|++++.|
T Consensus 203 h~~~v~~~~~~~-~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d 272 (383)
T 3ei3_B 203 HKAKVTHAEFNP-RCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQR 272 (383)
T ss_dssp SSSCEEEEEECS-SCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESS
T ss_pred CCCcEEEEEECC-CCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCC
Confidence 456799999999 887 999999999999999997 5555555 6889999999999 99999999987
No 68
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.16 E-value=6.9e-10 Score=78.47 Aligned_cols=65 Identities=12% Similarity=0.248 Sum_probs=60.5
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
+..+|++++|+| +++.|++++.||.|++||+++++.+..+..+...|++++|+|++++|++++.|
T Consensus 140 ~~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 204 (337)
T 1gxr_A 140 SAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD 204 (337)
T ss_dssp SSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecC
Confidence 345699999999 99999999999999999999999898998999999999999999999999987
No 69
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.16 E-value=3.9e-10 Score=82.05 Aligned_cols=64 Identities=25% Similarity=0.356 Sum_probs=60.1
Q ss_pred ecCeEEEEECCCCCCEEEEEeCC---CcEEEEeCCCCeeeEEecC-------------CCCCeEEEEECCCCCEEEEEeC
Q 033677 15 LVPVNDVVFSPLSRGAFVTGDNE---GYVAAWDAQSRRRLFELPR-------------FSNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s~D---g~I~iwD~~~~~~~~~~~~-------------~~~~v~~v~fspdg~~la~~s~ 78 (114)
..+|.+++|+| ++.+|++++.| |.|++||+++++.+..+.. +...|++++|+|++++|++++.
T Consensus 233 ~~~i~~i~~~~-~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 311 (397)
T 1sq9_A 233 SNSIRSVKFSP-QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW 311 (397)
T ss_dssp CCCEEEEEECS-STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET
T ss_pred CCccceEEECC-CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC
Confidence 56799999999 99999999999 9999999999998888887 8999999999999999999998
Q ss_pred C
Q 033677 79 C 79 (114)
Q Consensus 79 d 79 (114)
|
T Consensus 312 d 312 (397)
T 1sq9_A 312 D 312 (397)
T ss_dssp T
T ss_pred C
Confidence 8
No 70
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.16 E-value=2.1e-10 Score=82.73 Aligned_cols=66 Identities=23% Similarity=0.316 Sum_probs=56.6
Q ss_pred eecCeEEEEECC-CCCCEEEEEeCCCcEEEEeCCCC--eeeEEecCCCCCeEEEEECCC--CCEEEEEeCC
Q 033677 14 HLVPVNDVVFSP-LSRGAFVTGDNEGYVAAWDAQSR--RRLFELPRFSNSVASLSYNHG--GQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p-~~~~~~~t~s~Dg~I~iwD~~~~--~~~~~~~~~~~~v~~v~fspd--g~~la~~s~d 79 (114)
|..+|++|+|+| .++++|++|+.|++|++||++++ .....+.+|...|++++|+|+ |.+||+|+.|
T Consensus 56 H~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D 126 (316)
T 3bg1_A 56 HEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSD 126 (316)
T ss_dssp CSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSS
T ss_pred CCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCC
Confidence 466899999976 12689999999999999999886 355667789999999999998 7899999988
No 71
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.15 E-value=8.5e-11 Score=87.31 Aligned_cols=66 Identities=15% Similarity=0.204 Sum_probs=58.2
Q ss_pred eecCeEEEEECC-------CCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCC-CEEEEEeCC
Q 033677 14 HLVPVNDVVFSP-------LSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGG-QLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p-------~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg-~~la~~s~d 79 (114)
|..+|++|+|+| .++++|++||.|++|++||++++..+..+..+..+|.+++|+|++ .+|++++.|
T Consensus 135 H~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d 208 (393)
T 4gq1_A 135 HHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERN 208 (393)
T ss_dssp CSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETT
T ss_pred CCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCC
Confidence 577899999976 246799999999999999999888888888899999999999987 489999988
No 72
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.15 E-value=4.4e-11 Score=86.87 Aligned_cols=66 Identities=18% Similarity=0.145 Sum_probs=59.0
Q ss_pred CeecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCee----eEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 13 HHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRR----LFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 13 ~~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~----~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
.|..+|++++|+| ++++|++++.||.|++||+++++. +..+..|..+|++++|+|+|++|++++.+
T Consensus 203 ~~~~~v~~~~~sp-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~ 272 (377)
T 3dwl_C 203 PSGGWVHAVGFSP-SGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNY 272 (377)
T ss_dssp CCSSSEEEEEECT-TSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSS
T ss_pred cCCceEEEEEECC-CCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCC
Confidence 4567799999999 999999999999999999999877 67788899999999999999999998766
No 73
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.14 E-value=7.2e-10 Score=87.47 Aligned_cols=71 Identities=14% Similarity=0.119 Sum_probs=59.8
Q ss_pred CeecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCC-----eeeEEecCCCCCeEEEEECCCCCEEEEEeCC----Cccc
Q 033677 13 HHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSR-----RRLFELPRFSNSVASLSYNHGGQLLAVASSC----TYQE 83 (114)
Q Consensus 13 ~~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~-----~~~~~~~~~~~~v~~v~fspdg~~la~~s~d----~~~~ 83 (114)
.|..+|++|+|+|.+.++|++|+.||.|++||+.+. .....+.+|...|++++|+|+|++|++|+.| .|+.
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~ 459 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDL 459 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 356779999999933479999999999999999763 3445678999999999999999999999988 5663
No 74
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.14 E-value=5.5e-10 Score=83.12 Aligned_cols=68 Identities=19% Similarity=0.349 Sum_probs=59.8
Q ss_pred cCeEEEEECCCCCCEEEEEe--CCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC----Ccccc
Q 033677 16 VPVNDVVFSPLSRGAFVTGD--NEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC----TYQEA 84 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s--~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d----~~~~~ 84 (114)
..+..+.|.| ++..+++++ .||.|++||+.+++++..+.+|...|++++|+|||++||+|+.| .|+..
T Consensus 321 ~~v~~~~~~~-~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 321 SQVCSILWSP-HYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp SCEEEEEEET-TTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred cceeeeeecC-CCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 4588999999 887776654 79999999999999999999999999999999999999999998 47643
No 75
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.14 E-value=9.6e-11 Score=85.05 Aligned_cols=65 Identities=17% Similarity=0.240 Sum_probs=54.1
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCe---eeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRR---RLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~---~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|++++|+| ++++|++++.||.|++||++++. ....+..|...|++++|+|++++|++++.|
T Consensus 54 h~~~v~~~~~s~-~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 121 (377)
T 3dwl_C 54 HDKIVTCVDWAP-KSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGA 121 (377)
T ss_dssp CSSCEEEEEECT-TTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESS
T ss_pred CCceEEEEEEeC-CCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecC
Confidence 567899999999 99999999999999999999876 566677899999999999999999999987
No 76
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.12 E-value=2.8e-10 Score=81.29 Aligned_cols=65 Identities=20% Similarity=0.243 Sum_probs=56.1
Q ss_pred eecCeEEEEECCCCCC-EEEEEeCCCcEEEEeCCCC-------------------eeeEEecCCCCCeEEEEECCCCCEE
Q 033677 14 HLVPVNDVVFSPLSRG-AFVTGDNEGYVAAWDAQSR-------------------RRLFELPRFSNSVASLSYNHGGQLL 73 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~-~~~t~s~Dg~I~iwD~~~~-------------------~~~~~~~~~~~~v~~v~fspdg~~l 73 (114)
|..+|++++|+| ++. +|++++.||.|++||++++ +.+..+..|..+|++++|+|+|++|
T Consensus 258 ~~~~v~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 336 (357)
T 3i2n_A 258 HKSTVWQVRHLP-QNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGL 336 (357)
T ss_dssp CSSCEEEEEEET-TEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTE
T ss_pred CcCCEEEEEECC-CCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeE
Confidence 466799999999 887 8999999999999999854 3566677899999999999999988
Q ss_pred E-EEeCC
Q 033677 74 A-VASSC 79 (114)
Q Consensus 74 a-~~s~d 79 (114)
+ +++.|
T Consensus 337 ~~s~~~d 343 (357)
T 3i2n_A 337 CVCSSFD 343 (357)
T ss_dssp EEEEETT
T ss_pred EEEecCC
Confidence 8 67777
No 77
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.12 E-value=1.4e-09 Score=76.90 Aligned_cols=65 Identities=12% Similarity=0.160 Sum_probs=57.8
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCe--eeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRR--RLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~--~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
+..+|.+++|+| +++.|++++.||.|++||+++++ ....+..+...|++++|+|++++|++++.|
T Consensus 96 ~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 162 (337)
T 1gxr_A 96 RDNYIRSCKLLP-DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD 162 (337)
T ss_dssp TTSBEEEEEECT-TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCcEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC
Confidence 456799999999 99999999999999999999876 556677888999999999999999999987
No 78
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.12 E-value=1.1e-09 Score=79.84 Aligned_cols=63 Identities=22% Similarity=0.171 Sum_probs=57.6
Q ss_pred ecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCC-EEEEEeCC
Q 033677 15 LVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQ-LLAVASSC 79 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~-~la~~s~d 79 (114)
..+|.+++|+| ++..|++++.||.|++||++ ++.+..+..|...|.+++|+|++. +|++++.|
T Consensus 163 ~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 226 (383)
T 3ei3_B 163 DYWYCCVDVSV-SRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVD 226 (383)
T ss_dssp SCCEEEEEEET-TTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEETT
T ss_pred CCCeEEEEECC-CCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCC
Confidence 46799999999 99999999999999999994 667788889999999999999998 99999988
No 79
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.12 E-value=8.6e-10 Score=77.39 Aligned_cols=63 Identities=19% Similarity=0.195 Sum_probs=56.0
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|++++|+| ++ .|++++.||.|++||+++++.+..+..+..+|++++|+|+|+++ +++.|
T Consensus 224 ~~~~i~~~~~~~-~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~d 286 (313)
T 3odt_A 224 HESFVYCIKLLP-NG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDII-VGSSD 286 (313)
T ss_dssp CSSCEEEEEECT-TS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEE-EEETT
T ss_pred CCceEEEEEEec-CC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEE-EEeCC
Confidence 456799999999 77 68999999999999999999999998898999999999999855 57766
No 80
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.11 E-value=1.7e-09 Score=77.77 Aligned_cols=65 Identities=15% Similarity=0.127 Sum_probs=58.8
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCC------------------CCeeeEEecCCCCCeEEEEECCCCCEEEE
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQ------------------SRRRLFELPRFSNSVASLSYNHGGQLLAV 75 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~------------------~~~~~~~~~~~~~~v~~v~fspdg~~la~ 75 (114)
|..+|++++|+| ++++|++++.||.|++||++ .++.+..+..+...|++++|+|++++|++
T Consensus 141 ~~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 219 (372)
T 1k8k_C 141 IRSTVLSLDWHP-NSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAW 219 (372)
T ss_dssp CCSCEEEEEECT-TSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEE
T ss_pred cCCCeeEEEEcC-CCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEE
Confidence 456799999999 99999999999999999954 56777888889999999999999999999
Q ss_pred EeCC
Q 033677 76 ASSC 79 (114)
Q Consensus 76 ~s~d 79 (114)
++.|
T Consensus 220 ~~~d 223 (372)
T 1k8k_C 220 VSHD 223 (372)
T ss_dssp EETT
T ss_pred EeCC
Confidence 9988
No 81
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.11 E-value=1.6e-09 Score=78.74 Aligned_cols=64 Identities=19% Similarity=0.274 Sum_probs=58.2
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|++++|+| ++++|++++.||.|++|| .++..+..+..|..+|++++|+|++++|++++.|
T Consensus 107 ~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 170 (425)
T 1r5m_A 107 TTNQVTCLAWSH-DGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVE 170 (425)
T ss_dssp -CBCEEEEEECT-TSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETT
T ss_pred CCCceEEEEEcC-CCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecC
Confidence 466899999999 999999999999999999 5677788888999999999999999999999887
No 82
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.10 E-value=4.4e-10 Score=81.70 Aligned_cols=64 Identities=20% Similarity=0.213 Sum_probs=58.5
Q ss_pred ecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCe--------------------eeEEecCCCC--CeEEEEECCCCCE
Q 033677 15 LVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRR--------------------RLFELPRFSN--SVASLSYNHGGQL 72 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~--------------------~~~~~~~~~~--~v~~v~fspdg~~ 72 (114)
..+|.+++|+| ++++|++++.||.|++||++++. .+..+..+.. .|++++|+|+|++
T Consensus 330 ~~~i~~~~~s~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 408 (425)
T 1r5m_A 330 GVPIFAGRISQ-DGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNK 408 (425)
T ss_dssp TCCEEEEEECT-TSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSE
T ss_pred CccEEEEEEcC-CCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCce
Confidence 45799999999 99999999999999999999877 7888888866 9999999999999
Q ss_pred EEEEeCC
Q 033677 73 LAVASSC 79 (114)
Q Consensus 73 la~~s~d 79 (114)
||+++.|
T Consensus 409 l~~~~~d 415 (425)
T 1r5m_A 409 ISVAYSL 415 (425)
T ss_dssp EEEEESS
T ss_pred EEEEecC
Confidence 9999987
No 83
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.10 E-value=1e-09 Score=81.68 Aligned_cols=61 Identities=25% Similarity=0.285 Sum_probs=51.3
Q ss_pred cCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEec--CCCCCeEEEEECCCCCEEEEEeCC
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELP--RFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~--~~~~~v~~v~fspdg~~la~~s~d 79 (114)
+-++.|+|++ + ++|++|. |++|++||..++++...+. .|...|++|+|+|+|++||+|+.|
T Consensus 106 ~y~~~l~wS~-~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D 168 (420)
T 4gga_A 106 YYLNLVDWSS-G-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS 168 (420)
T ss_dssp TTCBCEEECT-T-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT
T ss_pred ccceeEEECC-C-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC
Confidence 3467799998 5 5777765 9999999999998776654 567789999999999999999998
No 84
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.10 E-value=1e-09 Score=78.83 Aligned_cols=65 Identities=29% Similarity=0.351 Sum_probs=58.9
Q ss_pred eecCeEEEEECCCC--CCEEEEEeCCCcEEEEeCCCCe--eeEEecCCCCCeEEEEECCC--CCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLS--RGAFVTGDNEGYVAAWDAQSRR--RLFELPRFSNSVASLSYNHG--GQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~--~~~~~t~s~Dg~I~iwD~~~~~--~~~~~~~~~~~v~~v~fspd--g~~la~~s~d 79 (114)
|..+|++++|+| + +++|++++.||.|++||+++++ .+..+..+...|++++|+|+ +.+|++++.|
T Consensus 54 h~~~v~~~~~~~-~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d 124 (379)
T 3jrp_A 54 HEGPVWRVDWAH-PKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD 124 (379)
T ss_dssp CSSCEEEEEECC-GGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred CCCcEEEEEeCC-CCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC
Confidence 467899999998 6 7999999999999999999886 66777789999999999999 9999999988
No 85
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.09 E-value=3.7e-10 Score=83.71 Aligned_cols=65 Identities=11% Similarity=0.170 Sum_probs=57.4
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEec-CCCCCeEEEEEC----CCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELP-RFSNSVASLSYN----HGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~-~~~~~v~~v~fs----pdg~~la~~s~d 79 (114)
|..+|++++|+| ++.+|++|+.||.|++||+++++.+..+. .+..+|++++|+ |++.+|++++.|
T Consensus 213 h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d 282 (437)
T 3gre_A 213 RHGAVSSICIDE-ECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSK 282 (437)
T ss_dssp GGCCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTT
T ss_pred CCCceEEEEECC-CCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCC
Confidence 567899999999 99999999999999999999999888876 677799999555 568899999888
No 86
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.09 E-value=1.7e-09 Score=78.33 Aligned_cols=70 Identities=16% Similarity=0.194 Sum_probs=59.7
Q ss_pred CeecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCe-------------------------------------------
Q 033677 13 HHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRR------------------------------------------- 49 (114)
Q Consensus 13 ~~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~------------------------------------------- 49 (114)
.|..+|++++|+| ++++|++++.||.|++||+++++
T Consensus 243 ~~~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~ 321 (408)
T 4a11_B 243 AHNGKVNGLCFTS-DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTV 321 (408)
T ss_dssp SCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEET
T ss_pred cccCceeEEEEcC-CCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEEC
Confidence 4567899999999 99999999999999999987643
Q ss_pred ----eeEEecCCCCCeEEEEECCCCCEEEEEeCC----Cccc
Q 033677 50 ----RLFELPRFSNSVASLSYNHGGQLLAVASSC----TYQE 83 (114)
Q Consensus 50 ----~~~~~~~~~~~v~~v~fspdg~~la~~s~d----~~~~ 83 (114)
.+..+..|..+|++++|+|+|.+|++++.| .|+.
T Consensus 322 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~ 363 (408)
T 4a11_B 322 YSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVP 363 (408)
T ss_dssp TTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred cCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeC
Confidence 344556788999999999999999999988 4663
No 87
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.09 E-value=4.5e-10 Score=82.85 Aligned_cols=61 Identities=15% Similarity=0.166 Sum_probs=52.8
Q ss_pred CeEEEEECCCCCCEEEE--EeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 17 PVNDVVFSPLSRGAFVT--GDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t--~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
.+..|+|+| +++++++ ++.|++|++||+++++++..+. +...|.+++|+|||++||+++.+
T Consensus 135 ~~~~v~fSp-Dg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~ 197 (365)
T 4h5i_A 135 YTKLVYISR-EGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS 197 (365)
T ss_dssp CEEEEEECT-TSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS
T ss_pred CEEEEEEcC-CCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccce
Confidence 377899999 9987764 4468999999999999888775 67789999999999999999876
No 88
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.08 E-value=8.1e-10 Score=81.53 Aligned_cols=66 Identities=14% Similarity=0.261 Sum_probs=56.5
Q ss_pred CeecCeEEEEECCCCC-CEEEEEeCCCcEEEEeCCCCee----eEEecCCCC------------CeEEEEECCCCCEEEE
Q 033677 13 HHLVPVNDVVFSPLSR-GAFVTGDNEGYVAAWDAQSRRR----LFELPRFSN------------SVASLSYNHGGQLLAV 75 (114)
Q Consensus 13 ~~~~~V~~v~f~p~~~-~~~~t~s~Dg~I~iwD~~~~~~----~~~~~~~~~------------~v~~v~fspdg~~la~ 75 (114)
.|..+|++++|+| ++ ++|++|+.||.|++||+++++. +..+..+.. .|++++|+|+|++|++
T Consensus 224 ~~~~~v~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 302 (447)
T 3dw8_B 224 ELTEVITAAEFHP-NSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMT 302 (447)
T ss_dssp GCCCCEEEEEECS-SCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEE
T ss_pred ccCcceEEEEECC-CCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEE
Confidence 3466799999999 87 8999999999999999999876 677777765 8999999999999998
Q ss_pred EeCC
Q 033677 76 ASSC 79 (114)
Q Consensus 76 ~s~d 79 (114)
++..
T Consensus 303 ~~~~ 306 (447)
T 3dw8_B 303 RDYL 306 (447)
T ss_dssp EESS
T ss_pred eeCC
Confidence 8763
No 89
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.08 E-value=2.7e-09 Score=78.22 Aligned_cols=61 Identities=15% Similarity=0.113 Sum_probs=55.3
Q ss_pred eEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 18 VNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
+....|+| ++++|++|+.||.|++||+++++....+..|...|++++|+|++++|++++.|
T Consensus 100 ~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d 160 (420)
T 3vl1_A 100 TAVDTAKL-QMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQD 160 (420)
T ss_dssp EEEEEECS-SSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETT
T ss_pred eEEEEEec-CCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCC
Confidence 33446888 89999999999999999999998888778999999999999999999999988
No 90
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.08 E-value=1.2e-09 Score=78.00 Aligned_cols=64 Identities=13% Similarity=0.143 Sum_probs=58.6
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|.+++|+| ++++|++++.||.|++||+++++.+..+. +..+|.+++|+|++++|++++.+
T Consensus 73 h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~ 136 (369)
T 3zwl_B 73 HTGTIWSIDVDC-FTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDN 136 (369)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECC
T ss_pred cCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCC
Confidence 466799999999 99999999999999999999999888776 78899999999999999998765
No 91
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.07 E-value=5e-10 Score=79.82 Aligned_cols=66 Identities=11% Similarity=0.207 Sum_probs=58.1
Q ss_pred CeecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCe---eeEEecCCCCCeEEEEECCCCC-EEEEEeCC
Q 033677 13 HHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRR---RLFELPRFSNSVASLSYNHGGQ-LLAVASSC 79 (114)
Q Consensus 13 ~~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~---~~~~~~~~~~~v~~v~fspdg~-~la~~s~d 79 (114)
.|..+|++++|+| ++.+|++++.||.|++||+.++. ....+..+...|++++|+|+++ +|++++.|
T Consensus 9 ~h~~~v~~~~~s~-~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 78 (342)
T 1yfq_A 9 APKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQ 78 (342)
T ss_dssp CCSSCEEEEEEEG-GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETT
T ss_pred CCCCcEEEEEEcC-CCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCC
Confidence 4567899999999 99999999999999999998776 3445558889999999999999 99999987
No 92
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.07 E-value=2.4e-09 Score=77.61 Aligned_cols=64 Identities=14% Similarity=0.042 Sum_probs=54.5
Q ss_pred cCeEEEEECCC-CCCEEEEEeCCCcEEEEeCCCCeeeEEec-CCCCCeEEEEECCCCCEEEEEeCC
Q 033677 16 VPVNDVVFSPL-SRGAFVTGDNEGYVAAWDAQSRRRLFELP-RFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 16 ~~V~~v~f~p~-~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~-~~~~~v~~v~fspdg~~la~~s~d 79 (114)
.+|.+++|+|. ++++|++++.||.|++||+++++.+.... .+...|++++|+|+|.+||+|+.|
T Consensus 126 ~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d 191 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD 191 (343)
T ss_dssp SCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT
T ss_pred CCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC
Confidence 57999999982 35789999999999999999998866554 445689999999999999999988
No 93
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.07 E-value=2e-10 Score=89.54 Aligned_cols=65 Identities=11% Similarity=0.152 Sum_probs=60.0
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC----Ccc
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC----TYQ 82 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d----~~~ 82 (114)
.|++|+|+| ++..|++++.|++|++||++++.++..+.+|...|++|+|||+|.+||+|+.| .|+
T Consensus 357 ~v~~v~fsp-~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd 425 (524)
T 2j04_B 357 NLVPVVYCP-QIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITN 425 (524)
T ss_dssp SCCCEEEET-TTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCB
T ss_pred cccceEeCC-CcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEe
Confidence 478899999 89999999999999999999998888888999999999999999999999988 566
No 94
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.07 E-value=3.8e-09 Score=75.00 Aligned_cols=66 Identities=18% Similarity=0.195 Sum_probs=59.6
Q ss_pred CeecCeEEEEECCCCC--CEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 13 HHLVPVNDVVFSPLSR--GAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 13 ~~~~~V~~v~f~p~~~--~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
.|...|..++|++ ++ .++++++.|+.|++||+++++.+..+.+|..+|++++|+|+|++||+|+.|
T Consensus 169 ~~~~~v~~~~~~~-~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D 236 (340)
T 4aow_A 169 SHSEWVSCVRFSP-NSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKD 236 (340)
T ss_dssp SCSSCEEEEEECS-CSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred cccCcccceEEcc-CCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCC
Confidence 3466789999988 54 578999999999999999999999999999999999999999999999988
No 95
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.07 E-value=9.4e-10 Score=87.04 Aligned_cols=65 Identities=9% Similarity=0.198 Sum_probs=61.3
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|.+++|+| +++.|++++.||.|++||+.+++.+..+..|...|++++|+|+|.+|++++.|
T Consensus 54 ~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 118 (814)
T 3mkq_A 54 TETPVRAGKFIA-RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD 118 (814)
T ss_dssp CSSCEEEEEEEG-GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT
T ss_pred CCCcEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCC
Confidence 456799999999 99999999999999999999999999999999999999999999999999988
No 96
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.05 E-value=2.3e-09 Score=80.39 Aligned_cols=65 Identities=12% Similarity=0.184 Sum_probs=56.6
Q ss_pred eecCeEEEEECCCCCCEE-EEEeCCCcEEEEeCC--CCeeeEEec--CCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAF-VTGDNEGYVAAWDAQ--SRRRLFELP--RFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~-~t~s~Dg~I~iwD~~--~~~~~~~~~--~~~~~v~~v~fspdg~~la~~s~d 79 (114)
+..+|++++|+| ++..| ++++.||.|++||+. +++.+..+. .+...|++++|+|+|++|++++.+
T Consensus 101 ~~~~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~ 170 (450)
T 2vdu_B 101 IYSYIRNLRLTS-DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKF 170 (450)
T ss_dssp CCCCEEEEEECT-TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred cCCceEEEEEcC-CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCC
Confidence 344799999999 88885 899999999999999 787777775 567889999999999999999876
No 97
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.05 E-value=1.3e-09 Score=86.47 Aligned_cols=65 Identities=14% Similarity=0.097 Sum_probs=55.3
Q ss_pred ecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCC-----CeEEEEECCCCCEEEEEeCC----Cccc
Q 033677 15 LVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSN-----SVASLSYNHGGQLLAVASSC----TYQE 83 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~-----~v~~v~fspdg~~la~~s~d----~~~~ 83 (114)
...|.+++|+| ++.+|++++.||.|++||.+. ++..+. +.. .|.+++|||||++||+|+.| .|+.
T Consensus 85 ~~~V~~vawSP-dG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~ 158 (588)
T 2j04_A 85 VCYPRVCKPSP-IDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSI 158 (588)
T ss_dssp SCCEEEEEECS-SSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEEC
T ss_pred CCcEEEEEECC-CCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEEC
Confidence 56799999999 999999999999999999654 555555 554 59999999999999999998 4763
No 98
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.03 E-value=1.5e-09 Score=81.38 Aligned_cols=64 Identities=17% Similarity=0.104 Sum_probs=58.2
Q ss_pred eecCeEEEEECCCC---CCEEEEEeCCCcEEEEeCCCCeeeEE-ecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLS---RGAFVTGDNEGYVAAWDAQSRRRLFE-LPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~---~~~~~t~s~Dg~I~iwD~~~~~~~~~-~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|++|+|+| + +.+|++++.|+.|++||++++..+.. +.+|...|++++|+ +|++|++++.|
T Consensus 194 h~~~v~~~~~sp-~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d 261 (450)
T 2vdu_B 194 HVSMLTDVHLIK-DSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGD 261 (450)
T ss_dssp CSSCEEEEEEEE-CTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESS
T ss_pred ccCceEEEEEcC-CCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCC
Confidence 456799999999 8 88999999999999999999887777 45889999999999 99999999988
No 99
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.02 E-value=3.2e-09 Score=79.45 Aligned_cols=66 Identities=21% Similarity=0.418 Sum_probs=57.5
Q ss_pred CeecCeEEEEECCCCCC-EEEEEeCCCcEEEEeCCC-CeeeEEecCCCCCeEEEEECCCCC-EEEEEeCC
Q 033677 13 HHLVPVNDVVFSPLSRG-AFVTGDNEGYVAAWDAQS-RRRLFELPRFSNSVASLSYNHGGQ-LLAVASSC 79 (114)
Q Consensus 13 ~~~~~V~~v~f~p~~~~-~~~t~s~Dg~I~iwD~~~-~~~~~~~~~~~~~v~~v~fspdg~-~la~~s~d 79 (114)
.|..+|++|+|+| ++. +|++|+.||.|++||+++ ...+..+..|...|++++|+|++. +||+++.|
T Consensus 275 ~~~~~v~~i~~~p-~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d 343 (430)
T 2xyi_A 275 AHTAEVNCLSFNP-YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 343 (430)
T ss_dssp CCSSCEEEEEECS-SCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETT
T ss_pred cCCCCeEEEEeCC-CCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCC
Confidence 3456799999999 774 899999999999999998 566778888999999999999995 78888887
No 100
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.02 E-value=7e-09 Score=75.07 Aligned_cols=65 Identities=22% Similarity=0.350 Sum_probs=55.2
Q ss_pred eecCeEEEEECCCCCC-EEEEEeCCCcEEEEeCCCCe-eeEEe---------------cCCCCCeEEEEECCCCCEEEEE
Q 033677 14 HLVPVNDVVFSPLSRG-AFVTGDNEGYVAAWDAQSRR-RLFEL---------------PRFSNSVASLSYNHGGQLLAVA 76 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~-~~~t~s~Dg~I~iwD~~~~~-~~~~~---------------~~~~~~v~~v~fspdg~~la~~ 76 (114)
|..+|++++|+| ++. +|++++.||.|++||+++.. .+..+ ..+...|++++|+|+|++|+++
T Consensus 185 ~~~~v~~~~~~~-~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 263 (408)
T 4a11_B 185 HRQEILAVSWSP-RYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTV 263 (408)
T ss_dssp CCSCEEEEEECS-SCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEE
T ss_pred CCCcEEEEEECC-CCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEe
Confidence 466799999999 776 79999999999999998764 33333 4677899999999999999999
Q ss_pred eCC
Q 033677 77 SSC 79 (114)
Q Consensus 77 s~d 79 (114)
+.|
T Consensus 264 ~~d 266 (408)
T 4a11_B 264 GTD 266 (408)
T ss_dssp ETT
T ss_pred cCC
Confidence 988
No 101
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.02 E-value=1e-09 Score=80.18 Aligned_cols=66 Identities=15% Similarity=0.224 Sum_probs=59.4
Q ss_pred CeecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCC----CeeeEEecCCCCCeEEEEECCC-CCEEEEEeCC
Q 033677 13 HHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQS----RRRLFELPRFSNSVASLSYNHG-GQLLAVASSC 79 (114)
Q Consensus 13 ~~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~----~~~~~~~~~~~~~v~~v~fspd-g~~la~~s~d 79 (114)
.|..+|++++|+| ++.+|++++.||.|++||+.+ .+.+..+..|..+|++++|+|+ +.+|++++.|
T Consensus 65 ~~~~~v~~~~~s~-~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 135 (416)
T 2pm9_A 65 QVDSKFNDLDWSH-NNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNN 135 (416)
T ss_dssp CCSSCEEEEEECS-SSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSS
T ss_pred ecCCceEEEEECC-CCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCC
Confidence 4567899999999 999999999999999999987 4577778889999999999998 8999999887
No 102
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.02 E-value=1.5e-09 Score=77.45 Aligned_cols=65 Identities=14% Similarity=0.331 Sum_probs=57.7
Q ss_pred eecCeEEEEECCCC---CCEEEEEeCCCcEEEEeCCCCe-eeEEecCCCCCeEEEE------ECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLS---RGAFVTGDNEGYVAAWDAQSRR-RLFELPRFSNSVASLS------YNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~---~~~~~t~s~Dg~I~iwD~~~~~-~~~~~~~~~~~v~~v~------fspdg~~la~~s~d 79 (114)
|..+|++++|+| + +.+|++++.||.|++||+++++ .+..+..|...|++++ |+|++++|++++.|
T Consensus 64 ~~~~v~~~~~~~-~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d 138 (357)
T 3i2n_A 64 KAKPIKCGTFGA-TSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRD 138 (357)
T ss_dssp ESSCEEEEECTT-CCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETT
T ss_pred ccCcEEEEEEcC-CCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCC
Confidence 456899999999 7 5899999999999999999887 7888889999999994 57899999999988
No 103
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.01 E-value=5.1e-09 Score=79.83 Aligned_cols=65 Identities=15% Similarity=0.172 Sum_probs=60.1
Q ss_pred eecCeEEEEECCCCCC-EEEEEeCCCcEEEEeCCCCeeeEEecCCCC---CeEEEEECCC-CCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRG-AFVTGDNEGYVAAWDAQSRRRLFELPRFSN---SVASLSYNHG-GQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~-~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~---~v~~v~fspd-g~~la~~s~d 79 (114)
|..+|++++|+| ++. +|++++.||.|++||+.+++.+..+..|.. .|++++|+|+ |++|++++.|
T Consensus 159 ~~~~v~~~~~~~-~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 228 (615)
T 1pgu_A 159 HSQRINACHLKQ-SRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSD 228 (615)
T ss_dssp CSSCEEEEEECS-SSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETT
T ss_pred CCccEEEEEECC-CCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCC
Confidence 456799999999 776 899999999999999999999999998988 9999999999 9999999987
No 104
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.01 E-value=1.9e-09 Score=85.54 Aligned_cols=60 Identities=13% Similarity=0.202 Sum_probs=52.0
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCee-------eEEe----cCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRR-------LFEL----PRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~-------~~~~----~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
.|.+++|+| ++++|++|+.||+|++||+.++.. +..+ .+|...|.+++|+||| +|+++.|
T Consensus 131 sv~svafSP-DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D 201 (588)
T 2j04_A 131 TYHCFEWNP-IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSN 201 (588)
T ss_dssp CEEEEEECS-SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETT
T ss_pred cEEEEEEcC-CCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCC
Confidence 589999999 999999999999999999998752 5665 5677899999999999 6667777
No 105
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.00 E-value=1.9e-09 Score=81.01 Aligned_cols=50 Identities=16% Similarity=0.113 Sum_probs=43.9
Q ss_pred EEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeE-EEEECCCCCEEEEEeCC
Q 033677 30 AFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVA-SLSYNHGGQLLAVASSC 79 (114)
Q Consensus 30 ~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~-~v~fspdg~~la~~s~d 79 (114)
++++++.||+|++||+.+++++.++.+|...+. .++|||||++||+|+.|
T Consensus 297 ~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D 347 (356)
T 2w18_A 297 CAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKD 347 (356)
T ss_dssp EEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTT
T ss_pred EEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECC
Confidence 578999999999999999999999998877554 68999999999999988
No 106
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.99 E-value=1.4e-09 Score=87.23 Aligned_cols=65 Identities=17% Similarity=0.243 Sum_probs=58.9
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCC--CCeeeEEecCCCCCeEEEEECCC--CCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQ--SRRRLFELPRFSNSVASLSYNHG--GQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~--~~~~~~~~~~~~~~v~~v~fspd--g~~la~~s~d 79 (114)
|..+|++++|+| ++++|++|+.||.|++||+. ++..+..+.+|..+|++++|+|+ |.+|++|+.|
T Consensus 8 H~~~V~~l~~s~-dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D 76 (753)
T 3jro_A 8 HNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD 76 (753)
T ss_dssp CCCCEEEECCCS-SSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT
T ss_pred CcceeEEEEECC-CCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC
Confidence 456799999999 99999999999999999998 45667778899999999999998 9999999988
No 107
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.99 E-value=6e-09 Score=77.72 Aligned_cols=64 Identities=16% Similarity=0.195 Sum_probs=58.9
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEEC--CCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYN--HGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fs--pdg~~la~~s~d 79 (114)
|..+|++++|+| ++ .|++|+.||.|++||+++++.+..+..|..+|++++|+ +++.+|++++.|
T Consensus 161 h~~~V~~l~~~~-~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d 226 (464)
T 3v7d_B 161 HDGGVWALKYAH-GG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRD 226 (464)
T ss_dssp CSSCEEEEEECS-TT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETT
T ss_pred CCcCEEEEEEcC-CC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCC
Confidence 567899999999 66 99999999999999999999999999999999999998 578899999988
No 108
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.97 E-value=9.9e-09 Score=76.74 Aligned_cols=67 Identities=22% Similarity=0.354 Sum_probs=57.8
Q ss_pred CeecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCC---eeeEEecCCCCCeEEEEECCCCC-EEEEEeCC
Q 033677 13 HHLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSR---RRLFELPRFSNSVASLSYNHGGQ-LLAVASSC 79 (114)
Q Consensus 13 ~~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~---~~~~~~~~~~~~v~~v~fspdg~-~la~~s~d 79 (114)
.|..+|++++|+|..+.+|++++.||.|++||+++. ..+..+..|...|++++|+|++. +||+|+.|
T Consensus 229 ~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d 299 (430)
T 2xyi_A 229 GHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD 299 (430)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT
T ss_pred CCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC
Confidence 356679999999944589999999999999999986 56667778999999999999987 78888887
No 109
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.97 E-value=5.5e-09 Score=77.13 Aligned_cols=63 Identities=22% Similarity=0.343 Sum_probs=56.4
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCC-CEEEEEe
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGG-QLLAVAS 77 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg-~~la~~s 77 (114)
|..+|.+++|+| ++.+|++|+.||.|++||+++++.+..+..+...|.+++|+|++ .++++++
T Consensus 216 ~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~ 279 (401)
T 4aez_A 216 HSSEVCGLAWRS-DGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGG 279 (401)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEEC
T ss_pred CCCCeeEEEEcC-CCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEec
Confidence 456799999999 99999999999999999999999888888999999999999977 5666664
No 110
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.94 E-value=7.8e-09 Score=82.89 Aligned_cols=65 Identities=29% Similarity=0.351 Sum_probs=59.1
Q ss_pred eecCeEEEEECCCC--CCEEEEEeCCCcEEEEeCCCCe--eeEEecCCCCCeEEEEECCC--CCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLS--RGAFVTGDNEGYVAAWDAQSRR--RLFELPRFSNSVASLSYNHG--GQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~--~~~~~t~s~Dg~I~iwD~~~~~--~~~~~~~~~~~v~~v~fspd--g~~la~~s~d 79 (114)
|..+|++++|+| + ++.|++|+.||.|++||++++. .+..+..|..+|++++|+|+ |.+|++|+.|
T Consensus 52 h~~~V~~l~~s~-~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d 122 (753)
T 3jro_A 52 HEGPVWRVDWAH-PKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD 122 (753)
T ss_dssp CSSCEEEEEECC-TTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred CcCceEEEEecC-CCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCC
Confidence 467899999998 7 8899999999999999999886 66777789999999999999 9999999988
No 111
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.94 E-value=8.2e-09 Score=76.93 Aligned_cols=77 Identities=19% Similarity=0.286 Sum_probs=63.0
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEe-----cCCCCCeEEEEECCCCCEEEEEeCCCcccccccC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFEL-----PRFSNSVASLSYNHGGQLLAVASSCTYQEATVIE 88 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~-----~~~~~~v~~v~fspdg~~la~~s~d~~~~~~~~~ 88 (114)
|..+|++++|++ ++|++|+.||.|++||+++++.+..+ ..+...|++++|+|+|.+||+|+.|. .
T Consensus 361 ~~~~v~~~~~~~---~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg-------~ 430 (445)
T 2ovr_B 361 HQSAVTCLQFNK---NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG-------T 430 (445)
T ss_dssp CSSCEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSS-------S
T ss_pred CCCCEEEEEECC---CEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCC-------C
Confidence 567899999987 69999999999999999999888777 36678899999999999999998873 1
Q ss_pred CCCcEEEEEcCc
Q 033677 89 EPPQIFIIRIDD 100 (114)
Q Consensus 89 ~~~~i~i~~~~~ 100 (114)
.+..|++-.++.
T Consensus 431 ~~~~l~v~df~~ 442 (445)
T 2ovr_B 431 EETKLLVLDFDV 442 (445)
T ss_dssp SCCEEEEEECCC
T ss_pred CccEEEEEECCC
Confidence 234466655544
No 112
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.93 E-value=1.4e-08 Score=84.04 Aligned_cols=65 Identities=22% Similarity=0.260 Sum_probs=60.0
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECC--CCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNH--GGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fsp--dg~~la~~s~d 79 (114)
|..+|.+++|+| ++.+|++++.||.|++||+.+++.+..+..|...|++++|+| ++.++++|+.|
T Consensus 656 h~~~v~~~~~s~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d 722 (1249)
T 3sfz_A 656 HEDEVLCCAFSS-DDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSND 722 (1249)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETT
T ss_pred CCCCEEEEEEec-CCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCC
Confidence 467899999999 999999999999999999999999999999999999999999 45688999887
No 113
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.93 E-value=1.8e-08 Score=74.35 Aligned_cols=63 Identities=24% Similarity=0.333 Sum_probs=58.0
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|++++|+| ++.+|++|+.||.|++||+.+++.+..+..|...|.+++|+ +++|++++.|
T Consensus 133 ~~~~v~~v~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d 195 (401)
T 4aez_A 133 ESTYVASVKWSH-DGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRS 195 (401)
T ss_dssp TTCCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETT
T ss_pred CCCCEEEEEECC-CCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCC
Confidence 456799999999 99999999999999999999999999999999999999994 6799999988
No 114
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.93 E-value=2.3e-09 Score=79.53 Aligned_cols=58 Identities=10% Similarity=0.127 Sum_probs=48.3
Q ss_pred EECCCCCC-EEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 22 VFSPLSRG-AFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 22 ~f~p~~~~-~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
.|+|.... ++++|+.||.|++||+.+++....+..+..+|++++|+|||++||+++.+
T Consensus 322 ~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~ 380 (393)
T 4gq1_A 322 CPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEG 380 (393)
T ss_dssp EECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESS
T ss_pred EEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 34441344 56678889999999999998888888888999999999999999999876
No 115
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.93 E-value=1.2e-08 Score=75.46 Aligned_cols=62 Identities=15% Similarity=0.147 Sum_probs=55.4
Q ss_pred CeEEEE--ECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecC--CCCCeEEEEECCCCCEEEEEeCC
Q 033677 17 PVNDVV--FSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPR--FSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~--f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~--~~~~v~~v~fspdg~~la~~s~d 79 (114)
.+.++. ++| ++.+|++++.||.|++||+++++.+..+.. |...|++++|+|++.+|++|+.|
T Consensus 170 ~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 235 (437)
T 3gre_A 170 YAVRMRAFVNE-EKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR 235 (437)
T ss_dssp CEEEEEEEECS-SCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT
T ss_pred CceEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC
Confidence 355555 567 788999999999999999999999988887 78899999999999999999988
No 116
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.92 E-value=1.6e-08 Score=75.45 Aligned_cols=63 Identities=14% Similarity=0.317 Sum_probs=58.5
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|.+++|+| +++.|++|+.||.|++||+++++.+..+..|...|.+++|+ +.+|++++.|
T Consensus 309 ~~~~v~~~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~d 371 (464)
T 3v7d_B 309 HTDRIYSTIYDH-ERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAAD 371 (464)
T ss_dssp CSSCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETT
T ss_pred CCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCC
Confidence 456799999999 99999999999999999999999999999999999999998 5799999988
No 117
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.90 E-value=5.8e-09 Score=81.26 Aligned_cols=67 Identities=15% Similarity=0.206 Sum_probs=56.8
Q ss_pred ecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCe-eeEEecCCCCCeEEE--EECCCC-CEEEEEeCC----Cccc
Q 033677 15 LVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRR-RLFELPRFSNSVASL--SYNHGG-QLLAVASSC----TYQE 83 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~-~~~~~~~~~~~v~~v--~fspdg-~~la~~s~d----~~~~ 83 (114)
..+|++++|+| + ..|++|+.||+|++||++++. ....+..|...|++| +|+|+| .+||+++.| .|+.
T Consensus 266 ~~~v~sv~~s~-~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~ 340 (524)
T 2j04_B 266 DSLITTFDFLS-P-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNP 340 (524)
T ss_dssp TTCEEEEEESS-S-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECG
T ss_pred CCCEEEEEecC-C-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEEC
Confidence 46799999998 6 489999999999999999764 345578899999999 678998 899999998 5763
No 118
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.89 E-value=4.9e-09 Score=86.06 Aligned_cols=68 Identities=15% Similarity=0.172 Sum_probs=58.2
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeE-----Eec-CCCCCeEEEEEC-----CCC---CEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLF-----ELP-RFSNSVASLSYN-----HGG---QLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~-----~~~-~~~~~v~~v~fs-----pdg---~~la~~s~d 79 (114)
|..+|++|+|+| ++ +|++|+.|++|++||++++..+. .+. +|...|++|+|+ ||| .+||+|+.|
T Consensus 574 h~~~V~svafSp-dG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D 651 (902)
T 2oaj_A 574 NKGKTSAINNSN-IG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDM 651 (902)
T ss_dssp CSCSEEEEEECB-TS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETT
T ss_pred CCCcEEEEEecC-Cc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecC
Confidence 567899999999 99 99999999999999998877654 232 788889999999 886 899999998
Q ss_pred ----Cccc
Q 033677 80 ----TYQE 83 (114)
Q Consensus 80 ----~~~~ 83 (114)
.|+.
T Consensus 652 ~tv~~wd~ 659 (902)
T 2oaj_A 652 GEVITYKI 659 (902)
T ss_dssp SEEEEEEE
T ss_pred CcEEEEEE
Confidence 5764
No 119
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.79 E-value=8.4e-09 Score=78.21 Aligned_cols=64 Identities=16% Similarity=0.199 Sum_probs=53.2
Q ss_pred ecCeEEEEECCCCCCEEE----EEeCCCcEEEEeCCCC--------ee---eEEecCCCCCeEEEEECCC-CCEEEEEeC
Q 033677 15 LVPVNDVVFSPLSRGAFV----TGDNEGYVAAWDAQSR--------RR---LFELPRFSNSVASLSYNHG-GQLLAVASS 78 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~----t~s~Dg~I~iwD~~~~--------~~---~~~~~~~~~~v~~v~fspd-g~~la~~s~ 78 (114)
..+|++++|+| ++++|+ +|+.|+.|++||+++. +. +..+.+|...|++++|+|+ +.+||+++.
T Consensus 92 ~~~v~~l~~sp-dg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 92 KFPIHHLALSC-DNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp SSCEEEEEECT-TSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred CCcccEEEEcC-CCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 34699999999 999988 7888999999998754 21 3344568889999999998 789999998
Q ss_pred C
Q 033677 79 C 79 (114)
Q Consensus 79 d 79 (114)
|
T Consensus 171 D 171 (434)
T 2oit_A 171 D 171 (434)
T ss_dssp T
T ss_pred C
Confidence 8
No 120
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.72 E-value=2.4e-07 Score=69.38 Aligned_cols=62 Identities=15% Similarity=0.155 Sum_probs=52.3
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCC---cEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEe
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEG---YVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg---~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s 77 (114)
|..+|.+++|+| +++.|++++.|+ .|++||+++++.. .+..+...+.+++|+|||+.||...
T Consensus 177 ~~~~v~~~~~Sp-dg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~ 241 (415)
T 2hqs_A 177 SPQPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFAL 241 (415)
T ss_dssp ESSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCcceeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEE
Confidence 345799999999 999999999885 9999999988764 4566778899999999999888443
No 121
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.71 E-value=1.3e-07 Score=69.18 Aligned_cols=65 Identities=9% Similarity=0.074 Sum_probs=50.3
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeee--EEe--------------------c-CCCCCeEEEEECCCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRL--FEL--------------------P-RFSNSVASLSYNHGG 70 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~--~~~--------------------~-~~~~~v~~v~fspdg 70 (114)
|..+|++++|+| ++++|++++.|+.|++||++..... ..+ . ....+...++|+|||
T Consensus 239 h~~~v~~~~~s~-~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~ 317 (355)
T 3vu4_A 239 DRADVVDMKWST-DGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISES 317 (355)
T ss_dssp CCSCEEEEEECT-TSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSS
T ss_pred CCCcEEEEEECC-CCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCC
Confidence 567899999999 9999999999999999999765311 111 0 112234679999999
Q ss_pred CEEEEEeCC
Q 033677 71 QLLAVASSC 79 (114)
Q Consensus 71 ~~la~~s~d 79 (114)
++|++++.|
T Consensus 318 ~~l~~~~~d 326 (355)
T 3vu4_A 318 SLVVVWPHT 326 (355)
T ss_dssp EEEEEETTT
T ss_pred CEEEEEeCC
Confidence 999999887
No 122
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.71 E-value=2.3e-07 Score=69.12 Aligned_cols=61 Identities=20% Similarity=0.251 Sum_probs=54.1
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
+..+|+++++. ++.|++|+.||.|++||+.+++....+.+|..+|++++| ++++|++|+.|
T Consensus 132 ~~~~v~~~~~d---~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~d 192 (435)
T 1p22_A 132 TSKGVYCLQYD---DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSD 192 (435)
T ss_dssp SCCCEEEEECC---SSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETT
T ss_pred CCCcEEEEEEC---CCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCC
Confidence 45568887764 579999999999999999999999999999999999999 68899999988
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.70 E-value=3.3e-08 Score=74.23 Aligned_cols=60 Identities=18% Similarity=0.214 Sum_probs=46.1
Q ss_pred eEEEEECC--CCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCC---CCeEEEEECCCCCEEEEEe
Q 033677 18 VNDVVFSP--LSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFS---NSVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 18 V~~v~f~p--~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~---~~v~~v~fspdg~~la~~s 77 (114)
+..++|+| .++.+|++++.|++|++||++++++++.+.++. ..+.+++|+|+|.++++++
T Consensus 181 v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s 245 (356)
T 2w18_A 181 ETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLS 245 (356)
T ss_dssp SCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC
T ss_pred eeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEec
Confidence 44444444 134678999999999999999999999997543 3677889999999886544
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.68 E-value=1.2e-07 Score=69.82 Aligned_cols=62 Identities=13% Similarity=0.070 Sum_probs=55.5
Q ss_pred ecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEe
Q 033677 15 LVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s 77 (114)
...|++++|+| ++.++++++.|+.|++||+++++.+..+..+...+..++|+|+|+++++++
T Consensus 169 ~~~v~~~~~~~-~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 230 (433)
T 3bws_A 169 LGFVETISIPE-HNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSN 230 (433)
T ss_dssp CCEEEEEEEGG-GTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEE
T ss_pred CCceeEEEEcC-CCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEe
Confidence 44799999999 889999999999999999999988888888888999999999999886555
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.67 E-value=3.4e-07 Score=66.51 Aligned_cols=61 Identities=18% Similarity=0.201 Sum_probs=51.0
Q ss_pred CeEEEEECCCCCCEE-EEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 17 PVNDVVFSPLSRGAF-VTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~-~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
.+.+++|+| +++.+ ++++.|+.|++||+.+++.+..+..+. .+..++|+|+|++|+++..+
T Consensus 33 ~~~~~~~s~-dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~ 94 (391)
T 1l0q_A 33 NPMGAVISP-DGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMA 94 (391)
T ss_dssp SEEEEEECT-TSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETT
T ss_pred CcceEEECC-CCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECC
Confidence 478999999 88765 778799999999999998887776544 89999999999988766543
No 126
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.66 E-value=1.9e-07 Score=69.53 Aligned_cols=60 Identities=12% Similarity=0.207 Sum_probs=46.6
Q ss_pred ecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 15 LVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
..+|.+++|++ +.|++|+.||.|++||+++++++..+..|...|++++| ++.+|++|+.|
T Consensus 296 ~~~v~~~~~~~---~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~d 355 (435)
T 1p22_A 296 KRGIACLQYRD---RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYD 355 (435)
T ss_dssp SSCEEEEEEET---TEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETT
T ss_pred CCcEEEEEeCC---CEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCC
Confidence 45577777754 57888888888888888888877778788888888887 57788888777
No 127
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.63 E-value=4.9e-07 Score=67.25 Aligned_cols=61 Identities=13% Similarity=0.238 Sum_probs=43.4
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|..+|.+++|++ +.|++|+.||.|++||+.+++.+..+..|...|.+++|+ +..|++|+.|
T Consensus 158 h~~~v~~~~~~~---~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~d 218 (445)
T 2ovr_B 158 HTGGVWSSQMRD---NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRD 218 (445)
T ss_dssp CSSCEEEEEEET---TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETT
T ss_pred CCCCEEEEEecC---CEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCC
Confidence 345677777765 477777777777777777777777777777777777774 4567777766
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.61 E-value=7.4e-07 Score=66.72 Aligned_cols=63 Identities=16% Similarity=0.084 Sum_probs=51.5
Q ss_pred ecCeEEEEECCCCCCEEE-EEeCCCc--EEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 15 LVPVNDVVFSPLSRGAFV-TGDNEGY--VAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~-t~s~Dg~--I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
...+.+++|+| +++.|+ +++.||. |.+||+++++. ..+..+...+..++|+|||++|++++.+
T Consensus 222 ~~~~~~~~~sp-dg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~ 287 (415)
T 2hqs_A 222 PRHNGAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQ 287 (415)
T ss_dssp SSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECT
T ss_pred CCcccCEEEcC-CCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECC
Confidence 34688999999 998776 7776664 99999998765 5566778889999999999999988753
No 129
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.59 E-value=9.7e-07 Score=64.88 Aligned_cols=62 Identities=15% Similarity=0.103 Sum_probs=52.4
Q ss_pred ecCeEEEEECCCCCCEEEEEeC---------------CCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeC
Q 033677 15 LVPVNDVVFSPLSRGAFVTGDN---------------EGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s~---------------Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~ 78 (114)
...+.+++|+| +++.|++++. ||.|++||+.+++.+..+.. ...+..++|+|+|++|++++.
T Consensus 344 ~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~ 420 (433)
T 3bws_A 344 FDKPNTIALSP-DGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDF 420 (433)
T ss_dssp SSSEEEEEECT-TSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEET
T ss_pred CCCCCeEEEcC-CCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEEC
Confidence 34588999999 9988877776 57999999999988877765 567899999999999988875
No 130
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.56 E-value=4.8e-07 Score=62.23 Aligned_cols=62 Identities=13% Similarity=0.085 Sum_probs=51.1
Q ss_pred ecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCC-CeeeEEecCC-CCCeEEEEECCCCCEEEEEeC
Q 033677 15 LVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQS-RRRLFELPRF-SNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~-~~~~~~~~~~-~~~v~~v~fspdg~~la~~s~ 78 (114)
...|.+++|+| ++++|++++ ++.|.+||+.+ ++.......+ ...+..++|+|+|++|++++.
T Consensus 41 ~~~v~~~~~sp-dg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 104 (297)
T 2ojh_A 41 PELFEAPNWSP-DGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDK 104 (297)
T ss_dssp SSCCEEEEECT-TSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEEC
T ss_pred CcceEeeEECC-CCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEe
Confidence 45689999999 999988876 78999999998 7665545444 367889999999999998883
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.43 E-value=9.6e-07 Score=60.68 Aligned_cols=64 Identities=9% Similarity=0.030 Sum_probs=51.5
Q ss_pred ecCeEEEEECCCCCCEEEEEe-CCCcEEEEeCC-CCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 15 LVPVNDVVFSPLSRGAFVTGD-NEGYVAAWDAQ-SRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s-~Dg~I~iwD~~-~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
...+..++|+| +++.|+.++ .++.+.+|+++ .+..+..+..+...+..++|+|+|++|++++.+
T Consensus 172 ~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 172 EGRNDGPDYSP-DGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYD 237 (297)
T ss_dssp SSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEE
T ss_pred CCccccceECC-CCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcC
Confidence 35689999999 888776655 58999999886 455566677777789999999999999888765
No 132
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.42 E-value=8.4e-07 Score=73.23 Aligned_cols=64 Identities=8% Similarity=0.010 Sum_probs=56.4
Q ss_pred ecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 15 LVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
...+..++|+| +++.|++++.++.|++||+.+++.......+...+..++|||||++||+++.+
T Consensus 378 ~~~~~~~~~Sp-DG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~ 441 (1045)
T 1k32_A 378 LGNVFAMGVDR-NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPL 441 (1045)
T ss_dssp CCSEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEE
T ss_pred ccceeeeEECC-CCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecC
Confidence 45688999999 99999999999999999999988776666788889999999999999887653
No 133
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.40 E-value=6.1e-06 Score=59.79 Aligned_cols=62 Identities=15% Similarity=0.120 Sum_probs=50.4
Q ss_pred cCeEEEEECCCCCCEEEEEe---CCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEE-eCC
Q 033677 16 VPVNDVVFSPLSRGAFVTGD---NEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVA-SSC 79 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s---~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~-s~d 79 (114)
..+.+++|+| +++.|++++ .++.|++||+++++.+..+..+ ..+..++|+|+|++|+++ +.|
T Consensus 200 ~~~~~~~~~~-~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~s~~~d 265 (391)
T 1l0q_A 200 AAPSGIAVNP-EGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG-PDPAGIAVTPDGKKVYVALSFX 265 (391)
T ss_dssp SEEEEEEECT-TSSEEEEEEECSSCCEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTT
T ss_pred CCccceEECC-CCCEEEEEecCcCCCcEEEEECCCCeEEEEEecC-CCccEEEEccCCCEEEEEcCCC
Confidence 3578999999 998888877 6899999999999888777654 457899999999977544 444
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.38 E-value=1.7e-06 Score=68.13 Aligned_cols=64 Identities=8% Similarity=0.010 Sum_probs=52.1
Q ss_pred ecCeEEEEECCCCCCEEEEEeC-CC-----cEEEEeCCCCeeeEEecCCCC------------------------CeEEE
Q 033677 15 LVPVNDVVFSPLSRGAFVTGDN-EG-----YVAAWDAQSRRRLFELPRFSN------------------------SVASL 64 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s~-Dg-----~I~iwD~~~~~~~~~~~~~~~------------------------~v~~v 64 (114)
...|..++|+| +++.|++++. || .|.+||+.+++....+..+.. .+..+
T Consensus 36 ~~~~~~~~~Sp-dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAP-DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECT-TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEec-CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 34689999999 9999999988 88 899999999876655543322 27899
Q ss_pred EECCCCCEEEEEeCC
Q 033677 65 SYNHGGQLLAVASSC 79 (114)
Q Consensus 65 ~fspdg~~la~~s~d 79 (114)
+|||||++|++++..
T Consensus 115 ~~SpDg~~l~~~~~~ 129 (741)
T 2ecf_A 115 QWSPDAQRLLFPLGG 129 (741)
T ss_dssp EECTTSSEEEEEETT
T ss_pred EECCCCCEEEEEeCC
Confidence 999999999988753
No 135
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.34 E-value=8.6e-06 Score=58.38 Aligned_cols=62 Identities=6% Similarity=0.079 Sum_probs=48.0
Q ss_pred CeEEEEECCCCCCEE-EEEeCCCcEEEEeCCCC---eeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 17 PVNDVVFSPLSRGAF-VTGDNEGYVAAWDAQSR---RRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~-~t~s~Dg~I~iwD~~~~---~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
.+..++|+| +++.| ++...++.|.+||+... +.+..+..+...+..++|+|||++|+++..+
T Consensus 241 ~~~~i~~sp-dG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~ 306 (347)
T 3hfq_A 241 GAAAIRLSH-DGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQN 306 (347)
T ss_dssp EEEEEEECT-TSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETT
T ss_pred cceeEEECC-CCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcC
Confidence 477899999 99865 56667899999999732 4444455555668899999999998888765
No 136
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.28 E-value=1.1e-05 Score=56.85 Aligned_cols=59 Identities=10% Similarity=0.152 Sum_probs=48.6
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
.+..++|+| +++.++++ ++.|.+||+.+++.+..+.. ...+..++|+|+|++|++++.+
T Consensus 242 ~~~~~~~s~-dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~ 300 (337)
T 1pby_B 242 FYFSTAVNP-AKTRAFGA--YNVLESFDLEKNASIKRVPL-PHSYYSVNVSTDGSTVWLGGAL 300 (337)
T ss_dssp CEEEEEECT-TSSEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECTTSCEEEEESBS
T ss_pred ceeeEEECC-CCCEEEEe--CCeEEEEECCCCcCcceecC-CCceeeEEECCCCCEEEEEcCC
Confidence 466899999 99888887 79999999999887776653 3567899999999988887554
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.23 E-value=1.3e-05 Score=56.97 Aligned_cols=74 Identities=23% Similarity=0.344 Sum_probs=54.5
Q ss_pred EEEEECCCCCCE-EEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCCCcccccccCCCCcEE
Q 033677 19 NDVVFSPLSRGA-FVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSCTYQEATVIEEPPQIF 94 (114)
Q Consensus 19 ~~v~f~p~~~~~-~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d~~~~~~~~~~~~~i~ 94 (114)
..++|+| +++. +++...++.|.+||..+++.+..+.. ...+..++|+|||++|+++.......+.+...+..|+
T Consensus 275 ~~~~~s~-dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~~~~~~~~~~~v~ 349 (353)
T 3vgz_A 275 LAVLFNP-ARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT-PTHPNSLALSADGKTLYVSVKQKSTKQQEATQPDDVI 349 (353)
T ss_dssp CCEEEET-TTTEEEEEETTTTEEEEEETTTTEEEEEEEC-CSEEEEEEECTTSCEEEEEEECCCBTTBCCSSCEEEE
T ss_pred ceEEECC-CCCEEEEEECCCCeEEEEECCCCeEEEEEec-CCCCCeEEEcCCCCEEEEEEcccccccccccCCCcEE
Confidence 4689999 8874 55555789999999999988777654 4568999999999988877766555544433444444
No 138
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.21 E-value=1.5e-05 Score=62.00 Aligned_cols=59 Identities=10% Similarity=0.081 Sum_probs=52.0
Q ss_pred eEEEEECCCCCCEEEEEeCCCcEEEEeC--CCCeeeEEecCCCCCeEEEEECC----CCCEEEEEeC
Q 033677 18 VNDVVFSPLSRGAFVTGDNEGYVAAWDA--QSRRRLFELPRFSNSVASLSYNH----GGQLLAVASS 78 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~Dg~I~iwD~--~~~~~~~~~~~~~~~v~~v~fsp----dg~~la~~s~ 78 (114)
+..++|+| ++++|++++.|+.|.+||+ .+++.+..+. ....+..++|+| ||+++++++.
T Consensus 181 ~~~v~~sp-dg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~ 245 (543)
T 1nir_A 181 VHISRMSA-SGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAY 245 (543)
T ss_dssp EEEEEECT-TSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEE
T ss_pred cceEEECC-CCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEc
Confidence 77899999 9999999999999999999 7888887776 455679999999 9999988874
No 139
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.15 E-value=4.3e-06 Score=65.80 Aligned_cols=61 Identities=11% Similarity=0.134 Sum_probs=51.1
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCe--eeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRR--RLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~--~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
.|..++|+| +++.|++++. +.|.+||+.++. ....+..+...+..++|||||++||+++.+
T Consensus 110 ~v~~~~~Sp-Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~ 172 (741)
T 2ecf_A 110 GIVDYQWSP-DAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGR 172 (741)
T ss_dssp ESCCCEECT-TSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETT
T ss_pred CcceeEECC-CCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCC
Confidence 378899999 9999988886 999999999872 344566677889999999999999988754
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.15 E-value=1.3e-05 Score=56.43 Aligned_cols=62 Identities=24% Similarity=0.192 Sum_probs=46.8
Q ss_pred ecCeEEEEECCCCCCEEEEEeCC-CcEEEEeCC--CCe--eeEEecCCCCCeEEEEECCCCCEEEEEeC
Q 033677 15 LVPVNDVVFSPLSRGAFVTGDNE-GYVAAWDAQ--SRR--RLFELPRFSNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s~D-g~I~iwD~~--~~~--~~~~~~~~~~~v~~v~fspdg~~la~~s~ 78 (114)
...+..++|+| +++.|++++.+ +.|.+|++. +++ .+..+... ..+..++|+|+|++|++++.
T Consensus 37 ~~~~~~~~~sp-dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~ 103 (343)
T 1ri6_A 37 PGQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-GSLTHISTDHQGQFVFVGSY 103 (343)
T ss_dssp SSCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-SCCSEEEECTTSSEEEEEET
T ss_pred CCCCceEEECC-CCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-CCCcEEEEcCCCCEEEEEec
Confidence 34577899999 99888777776 999999997 444 33334333 37889999999998877765
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.15 E-value=9.3e-07 Score=69.31 Aligned_cols=60 Identities=5% Similarity=0.086 Sum_probs=50.1
Q ss_pred eEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCC---CeEEEEECCCCCEEEEEeCC
Q 033677 18 VNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSN---SVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~---~v~~v~fspdg~~la~~s~d 79 (114)
+.+++|+| +++++++ +.||.|++||+.+++....+..+.. .|.+++|||||++||+++.+
T Consensus 19 ~~~~~~sp-dg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~ 81 (723)
T 1xfd_A 19 DPEAKWIS-DTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNV 81 (723)
T ss_dssp CCCCCBSS-SSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESC
T ss_pred ccccEEcC-CCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecC
Confidence 56889999 9887665 7899999999999887766665544 48999999999999998765
No 142
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.14 E-value=5.8e-06 Score=63.71 Aligned_cols=59 Identities=12% Similarity=-0.132 Sum_probs=49.4
Q ss_pred EEEEECCCCCCEEEEEeCC----CcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 19 NDVVFSPLSRGAFVTGDNE----GYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 19 ~~v~f~p~~~~~~~t~s~D----g~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
.+++|+| +++.|+.++.| +.|.+||+.+++.. .+..+...+..++|||||+.||++..+
T Consensus 153 ~~~~~sp-DG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~ 215 (582)
T 3o4h_A 153 FGFVSDI-RGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETA 215 (582)
T ss_dssp CEEEEEE-ETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECS
T ss_pred ceEEECC-CCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCC
Confidence 6889999 99999988777 78999999887744 566777889999999999999955544
No 143
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.11 E-value=1.9e-05 Score=55.60 Aligned_cols=61 Identities=11% Similarity=0.168 Sum_probs=45.2
Q ss_pred CeEEEEECCCCCCEEE-EEeCCCcEEEEeCCC----CeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 17 PVNDVVFSPLSRGAFV-TGDNEGYVAAWDAQS----RRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~-t~s~Dg~I~iwD~~~----~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
.+..++|+| +++.|+ ++..++.|.+||+.. .+.+..+..... +..++|+|+|++|++++.+
T Consensus 232 ~~~~i~~s~-dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~ 297 (343)
T 1ri6_A 232 WAADIHITP-DGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQK 297 (343)
T ss_dssp CEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTT
T ss_pred CccceEECC-CCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCC
Confidence 466899999 887665 566799999999982 233444443333 8899999999988888743
No 144
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.11 E-value=5.3e-05 Score=54.60 Aligned_cols=61 Identities=15% Similarity=0.128 Sum_probs=45.6
Q ss_pred CeEEEEECCCCCCEEEEEeC--CCcEEEEeCC--CCe--eeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 17 PVNDVVFSPLSRGAFVTGDN--EGYVAAWDAQ--SRR--RLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~--Dg~I~iwD~~--~~~--~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
.+..++|+| +++.|+++.. ++.|.+|++. +++ .+..+.. ...+..++|+|||++|+++..+
T Consensus 260 ~~~~i~~sp-dg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~ 326 (361)
T 3scy_A 260 GSGDIHLSP-DGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRD 326 (361)
T ss_dssp CEEEEEECT-TSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETT
T ss_pred CcccEEECC-CCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECC
Confidence 357999999 9987766555 4899999986 343 3333444 5577899999999999888754
No 145
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.09 E-value=2.4e-05 Score=55.34 Aligned_cols=61 Identities=15% Similarity=0.217 Sum_probs=47.8
Q ss_pred cCeEEEEECCCCCCE-EEEEeCCCcEEEEeCCCCee---eEEecCCCCCeEEEEECCCCCEEEEEeC
Q 033677 16 VPVNDVVFSPLSRGA-FVTGDNEGYVAAWDAQSRRR---LFELPRFSNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~-~~t~s~Dg~I~iwD~~~~~~---~~~~~~~~~~v~~v~fspdg~~la~~s~ 78 (114)
..+..++|+| +++. ++++..++.|.+||+.+++. +..+.. ...+..++|+|||++|+++..
T Consensus 176 ~~~~~~~~sp-dg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~ 240 (331)
T 3u4y_A 176 TRPFNITFTP-DGNFAFVANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTE 240 (331)
T ss_dssp SSEEEEEECT-TSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECS
T ss_pred CCccceEECC-CCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCCCCEEEEEEc
Confidence 3468999999 8875 55566789999999998887 666653 456789999999997776654
No 146
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.09 E-value=3.1e-05 Score=54.98 Aligned_cols=62 Identities=11% Similarity=0.086 Sum_probs=51.4
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecC----CCCCeEEEEECCCCCEEEEEeCC
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPR----FSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~----~~~~v~~v~fspdg~~la~~s~d 79 (114)
.+..++|+| +++.|++++.++.|.+||..+++....+.. ....+..++|+|+|++++++..+
T Consensus 186 ~~~~~~~s~-dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 251 (353)
T 3vgz_A 186 MSTGLALDS-EGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK 251 (353)
T ss_dssp TCCCCEEET-TTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS
T ss_pred ccceEEECC-CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC
Confidence 367899999 999999999999999999999987776653 34567889999999987776654
No 147
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.07 E-value=8.2e-05 Score=53.57 Aligned_cols=62 Identities=10% Similarity=0.079 Sum_probs=45.4
Q ss_pred CeEEEEECCCCCCEEEEEe-CCCcEEEEeCCCCee--eEEec---CCCCCeEEEEECCCCCEEEEEeCC
Q 033677 17 PVNDVVFSPLSRGAFVTGD-NEGYVAAWDAQSRRR--LFELP---RFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s-~Dg~I~iwD~~~~~~--~~~~~---~~~~~v~~v~fspdg~~la~~s~d 79 (114)
.+..++|+| +++.+++++ .++.|.+||+.+++. +..+. .....+..++|+|||++|+++..+
T Consensus 212 ~~~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~ 279 (361)
T 3scy_A 212 GPRHLIFNS-DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRL 279 (361)
T ss_dssp CEEEEEECT-TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECS
T ss_pred CCeEEEEcC-CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCC
Confidence 467899999 998776666 689999999987643 22222 233457899999999988766543
No 148
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.06 E-value=3.7e-06 Score=64.82 Aligned_cols=63 Identities=17% Similarity=0.114 Sum_probs=51.9
Q ss_pred ecCeEEEEECCCCCCEEEEEeCCC--cEEEEeCCCCeeeEEecCCCCCeEEEE--------ECCCCCEEEEEeCC
Q 033677 15 LVPVNDVVFSPLSRGAFVTGDNEG--YVAAWDAQSRRRLFELPRFSNSVASLS--------YNHGGQLLAVASSC 79 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s~Dg--~I~iwD~~~~~~~~~~~~~~~~v~~v~--------fspdg~~la~~s~d 79 (114)
...+..++|+| +++.|+++..+| .|++||+.+++.. .+..+...+..++ |+|||.++++++.+
T Consensus 194 ~~~~~~~~~Sp-DG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 266 (582)
T 3o4h_A 194 EGSFSSASISP-GMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARRE 266 (582)
T ss_dssp SCEEEEEEECT-TSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEET
T ss_pred CCccccceECC-CCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcC
Confidence 34578999999 999999888888 8999999988766 6666666666667 99999888888766
No 149
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.01 E-value=4.2e-05 Score=60.62 Aligned_cols=83 Identities=11% Similarity=0.166 Sum_probs=56.3
Q ss_pred cCeEEEEECCCCCCEEEEEeCCC-----cEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCCCcc---cc--c
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNEG-----YVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSCTYQ---EA--T 85 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~Dg-----~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d~~~---~~--~ 85 (114)
..+..++|+| +++.|+.++.++ .|++||+.+++........ ..+..++|+|||+.|+.++.+.-. .+ .
T Consensus 125 ~~~~~~~~SP-Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~ 202 (710)
T 2xdw_A 125 VALRGYAFSE-DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTET 202 (710)
T ss_dssp EEEEEEEECT-TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCC
T ss_pred EEEEEEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccccc
Confidence 3578899999 999887765543 8999999998865432211 225679999999999988866320 01 1
Q ss_pred ccCCCCcEEEEEcCc
Q 033677 86 VIEEPPQIFIIRIDD 100 (114)
Q Consensus 86 ~~~~~~~i~i~~~~~ 100 (114)
+...+..||++.+..
T Consensus 203 ~~~~~~~v~~~~l~t 217 (710)
T 2xdw_A 203 STNLHQKLYYHVLGT 217 (710)
T ss_dssp CCCCCCEEEEEETTS
T ss_pred ccCCCCEEEEEECCC
Confidence 123345677777644
No 150
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.00 E-value=1.7e-05 Score=65.50 Aligned_cols=63 Identities=13% Similarity=0.116 Sum_probs=52.7
Q ss_pred ecCeEEEEECCCCCCEEEEEeCCC----------cEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 15 LVPVNDVVFSPLSRGAFVTGDNEG----------YVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s~Dg----------~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
..++..++|+| +++.|++++.++ .|++||+.+++ ...+..+...+..++|+|||++|++++.+
T Consensus 420 ~~~v~~~~~Sp-DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~ 492 (1045)
T 1k32_A 420 EAMITDFTISD-NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYR 492 (1045)
T ss_dssp SSCCCCEEECT-TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESC
T ss_pred CCCccceEECC-CCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecc
Confidence 44578999999 999888877654 99999999887 56667777788999999999999988864
No 151
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.00 E-value=2.1e-05 Score=55.65 Aligned_cols=61 Identities=15% Similarity=0.225 Sum_probs=47.9
Q ss_pred CeEEEEECCCCCCE-EEEEeCCCcEEEEeCCCCeeeEEecCCC------CCeEEEEECCCCCEEEEEeC
Q 033677 17 PVNDVVFSPLSRGA-FVTGDNEGYVAAWDAQSRRRLFELPRFS------NSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 17 ~V~~v~f~p~~~~~-~~t~s~Dg~I~iwD~~~~~~~~~~~~~~------~~v~~v~fspdg~~la~~s~ 78 (114)
.+..++|+| +++. +++...++.|.+||+.+++....+.... ..+..++|+|||++|+++..
T Consensus 44 ~~~~~~~s~-dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 111 (349)
T 1jmx_B 44 GPGTAMMAP-DNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVN 111 (349)
T ss_dssp SSCEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEE
T ss_pred CCceeEECC-CCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcc
Confidence 467899999 8875 4566678999999999988776665322 23788999999999988874
No 152
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.98 E-value=7.1e-06 Score=64.29 Aligned_cols=61 Identities=8% Similarity=0.007 Sum_probs=48.4
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCC------------------eEEEEECCCCCEEEEEeC
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNS------------------VASLSYNHGGQLLAVASS 78 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~------------------v~~v~fspdg~~la~~s~ 78 (114)
.+..++|+| +++.|+.++. +.|.+||+.+++.......+... +.+++|||||+.||+++.
T Consensus 115 ~~~~~~~SP-dG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~ 192 (723)
T 1xfd_A 115 KLQYAGWGP-KGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAI 192 (723)
T ss_dssp CCSBCCBCS-STTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEE
T ss_pred cccccEECC-CCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEE
Confidence 377899999 9999888875 79999999988766555443333 378999999999998875
Q ss_pred C
Q 033677 79 C 79 (114)
Q Consensus 79 d 79 (114)
+
T Consensus 193 ~ 193 (723)
T 1xfd_A 193 N 193 (723)
T ss_dssp E
T ss_pred C
Confidence 4
No 153
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.96 E-value=1.2e-05 Score=63.34 Aligned_cols=61 Identities=13% Similarity=0.129 Sum_probs=48.3
Q ss_pred CeEEEEECCCCCCEEEEEeC---------CCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 17 PVNDVVFSPLSRGAFVTGDN---------EGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~---------Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
.+..++|+| +++.|+.++. |+.|++||+.+++.+.. ......+..++|||||+.||++...
T Consensus 61 ~~~~~~~Sp-Dg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~-~~l~~~~~~~~~SPDG~~la~~~~~ 130 (719)
T 1z68_A 61 NASNYGLSP-DRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRG-NELPRPIQYLCWSPVGSKLAYVYQN 130 (719)
T ss_dssp TCSEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS-SCCCSSBCCEEECSSTTCEEEEETT
T ss_pred ceeeEEECC-CCCeEEEEecCceeEEeecceEEEEEECCCCccccc-eecCcccccceECCCCCEEEEEECC
Confidence 378999999 9999988876 78999999998875211 1123568899999999999988644
No 154
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.96 E-value=7.2e-05 Score=53.52 Aligned_cols=64 Identities=8% Similarity=0.064 Sum_probs=43.9
Q ss_pred ecCeEEEEECCCCCCEEEEEe-CCCcEEEEeCCC-C--eeeEEecCC---------CCCeEEEEECCCCCEEEEEeCC
Q 033677 15 LVPVNDVVFSPLSRGAFVTGD-NEGYVAAWDAQS-R--RRLFELPRF---------SNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s-~Dg~I~iwD~~~-~--~~~~~~~~~---------~~~v~~v~fspdg~~la~~s~d 79 (114)
...+..|+|+| ++++|++++ .++.|.+||+.. + ..+..+... ...+..++|+|||+++++...+
T Consensus 85 ~~~p~~~a~sp-dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~ 161 (347)
T 3hfq_A 85 GTPPAYVAVDE-ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS 161 (347)
T ss_dssp SCCCSEEEEET-TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT
T ss_pred CCCCEEEEECC-CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC
Confidence 34577899999 998777776 789999999963 2 222333211 1248899999999955554433
No 155
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.94 E-value=2.8e-05 Score=55.01 Aligned_cols=61 Identities=13% Similarity=0.114 Sum_probs=46.0
Q ss_pred CeEEEEECCCCCCEEEE-EeCCCcEEEEeCCCCee-eEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 17 PVNDVVFSPLSRGAFVT-GDNEGYVAAWDAQSRRR-LFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t-~s~Dg~I~iwD~~~~~~-~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
++ .++|+| +++.+++ +..++.|.+||..+++. ...+.....+..+++|+|+|++|+++..+
T Consensus 42 ~~-~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 104 (331)
T 3u4y_A 42 FV-DTAITS-DCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGL 104 (331)
T ss_dssp EE-EEEECS-SSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCS
T ss_pred cc-eEEEcC-CCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCC
Confidence 35 899999 8875555 44489999999999886 66665555665559999999988854433
No 156
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.94 E-value=2.2e-05 Score=62.56 Aligned_cols=59 Identities=20% Similarity=0.220 Sum_probs=48.4
Q ss_pred EEEEECCCCCCEEEEEeCC---------CcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 19 NDVVFSPLSRGAFVTGDNE---------GYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 19 ~~v~f~p~~~~~~~t~s~D---------g~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
++++|+| +++.|+.++.+ +.+.+||+.+++.. .+..+...+...+|||||+.||.+...
T Consensus 65 ~~~~~Sp-dg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~~~ 132 (740)
T 4a5s_A 65 NDYSISP-DGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVWNN 132 (740)
T ss_dssp CEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEETT
T ss_pred cceEECC-CCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEECC
Confidence 4589999 99998888876 66779999998754 455667789999999999999988643
No 157
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.94 E-value=2.4e-05 Score=54.96 Aligned_cols=61 Identities=16% Similarity=0.200 Sum_probs=49.1
Q ss_pred CeEEEEECCCCCCEEEEEe------------CCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 17 PVNDVVFSPLSRGAFVTGD------------NEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s------------~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
.+..++|+| +++.|++++ .++.|.+||+.+++.+..+.. ...+..++|+|+|++|++++.+
T Consensus 83 ~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~ 155 (337)
T 1pby_B 83 SLFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGLGRD 155 (337)
T ss_dssp CTTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEESSS
T ss_pred cccceEECC-CCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEeCCe
Confidence 466899999 998888875 579999999999887766654 4567889999999988877544
No 158
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.93 E-value=5.2e-05 Score=53.58 Aligned_cols=58 Identities=5% Similarity=-0.068 Sum_probs=46.2
Q ss_pred EEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCC-CCeEEEEECCCCCEEEEEeC
Q 033677 20 DVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFS-NSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 20 ~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~-~~v~~v~fspdg~~la~~s~ 78 (114)
++++.+ ++.++++++.++.|.+||..+++.+..+.... ..+..++|+|+|++++++..
T Consensus 4 g~~~~~-~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~ 62 (349)
T 1jmx_B 4 GPALKA-GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN 62 (349)
T ss_dssp CCCCCT-TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEET
T ss_pred cccccC-CCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeC
Confidence 456777 77889999999999999999998877775432 25789999999987665553
No 159
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.92 E-value=2.1e-05 Score=61.23 Aligned_cols=55 Identities=18% Similarity=0.082 Sum_probs=48.4
Q ss_pred ECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 23 FSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 23 f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|+| ++.++++++.|+.|.+||..+++++..+..... +..++|+|||++|++++.|
T Consensus 145 ~~p-~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d 199 (543)
T 1nir_A 145 LDL-PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRD 199 (543)
T ss_dssp CCG-GGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETT
T ss_pred cCC-CCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCC
Confidence 788 888899999999999999999998888873333 8899999999999999887
No 160
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.91 E-value=4.7e-05 Score=59.64 Aligned_cols=58 Identities=21% Similarity=0.255 Sum_probs=45.9
Q ss_pred cCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEe
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s 77 (114)
.+|.+++|+| + ..++.+. |+.|.+||+.+++... +..+...+..++|||||+.||++.
T Consensus 82 ~~v~~~~~sp-d-~~~~~~~-~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~~ 139 (706)
T 2z3z_A 82 FPSFRTLDAG-R-GLVVLFT-QGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYVR 139 (706)
T ss_dssp CCCEEEEETT-T-TEEEEEE-TTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEEE
T ss_pred cCceeEEECC-C-CeEEEEE-CCEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEEE
Confidence 5699999999 8 5555553 5999999999887544 445566788999999999999864
No 161
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.88 E-value=2.9e-05 Score=60.85 Aligned_cols=61 Identities=13% Similarity=0.174 Sum_probs=48.4
Q ss_pred eEEEEECCCCCCEEEEEe---------------------------------CCCcEEEEeCCCCeeeEEec--CCCCCeE
Q 033677 18 VNDVVFSPLSRGAFVTGD---------------------------------NEGYVAAWDAQSRRRLFELP--RFSNSVA 62 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s---------------------------------~Dg~I~iwD~~~~~~~~~~~--~~~~~v~ 62 (114)
+.+++|+| +++.|++++ .+..|.+||+.+++...... .+...+.
T Consensus 183 ~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 261 (706)
T 2z3z_A 183 EKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLT 261 (706)
T ss_dssp CCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEE
T ss_pred CceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEe
Confidence 57899999 999998887 44689999999887544332 3456789
Q ss_pred EEEECCCCCEEEEEeCC
Q 033677 63 SLSYNHGGQLLAVASSC 79 (114)
Q Consensus 63 ~v~fspdg~~la~~s~d 79 (114)
.++|+|||+.|++++.+
T Consensus 262 ~~~~spdg~~l~~~~~~ 278 (706)
T 2z3z_A 262 NLSWSPDENILYVAEVN 278 (706)
T ss_dssp EEEECTTSSEEEEEEEC
T ss_pred eEEEECCCCEEEEEEeC
Confidence 99999999999887654
No 162
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.87 E-value=0.00014 Score=51.63 Aligned_cols=62 Identities=11% Similarity=0.157 Sum_probs=49.7
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
.+.+++|.| ++++++++..++.|.+||..+++...........+..++|+|+|+++++...+
T Consensus 46 ~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~ 107 (333)
T 2dg1_A 46 QLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGD 107 (333)
T ss_dssp CEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTT
T ss_pred cccCcEECC-CCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCC
Confidence 468899999 88888888889999999998876544333456789999999999988776543
No 163
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.85 E-value=4.2e-05 Score=60.55 Aligned_cols=82 Identities=10% Similarity=-0.059 Sum_probs=53.6
Q ss_pred cCeEEEEECCCCCCEEE-----EEeCCCcEEEEeCCCCeeeEEecCCCCC--eEEEEECCCCCEEEEEeCCCccccc--c
Q 033677 16 VPVNDVVFSPLSRGAFV-----TGDNEGYVAAWDAQSRRRLFELPRFSNS--VASLSYNHGGQLLAVASSCTYQEAT--V 86 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~-----t~s~Dg~I~iwD~~~~~~~~~~~~~~~~--v~~v~fspdg~~la~~s~d~~~~~~--~ 86 (114)
..+..++|+| ++++|+ .|+.+..|++||+.+++.+. ..+... ...++|+|||+.|+.++.|.-..+. +
T Consensus 121 ~~~~~~~~SP-DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~ 197 (695)
T 2bkl_A 121 VSLGTWAVSW-DGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDE 197 (695)
T ss_dssp EEEEEEEECT-TSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGG
T ss_pred EEEEEEEECC-CCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCcccc
Confidence 4688999999 999887 44445789999999987541 111111 2679999999999988866321111 1
Q ss_pred cCCCCcEEEEEcCc
Q 033677 87 IEEPPQIFIIRIDD 100 (114)
Q Consensus 87 ~~~~~~i~i~~~~~ 100 (114)
...+..||++.+..
T Consensus 198 ~~~~~~v~~~~l~t 211 (695)
T 2bkl_A 198 RPGYTTIRYHTLGT 211 (695)
T ss_dssp GGGGCEEEEEETTS
T ss_pred CCCCCEEEEEECCC
Confidence 12344566666643
No 164
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.84 E-value=2e-05 Score=61.91 Aligned_cols=57 Identities=5% Similarity=0.121 Sum_probs=45.0
Q ss_pred EEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCC---CeEEEEECCCCCEEEEEeC
Q 033677 20 DVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSN---SVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 20 ~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~---~v~~v~fspdg~~la~~s~ 78 (114)
+++|+| +++ ++..+.|+.|++||+.+++....+..+.. .+.+++|||||++||+++.
T Consensus 20 ~~~~s~-dg~-~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~ 79 (719)
T 1z68_A 20 FPNWIS-GQE-YLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESD 79 (719)
T ss_dssp CCEESS-SSE-EEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEE
T ss_pred ccEECC-CCe-EEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEec
Confidence 789999 885 55555799999999999887665543322 4889999999999998875
No 165
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.79 E-value=7.4e-05 Score=53.94 Aligned_cols=58 Identities=9% Similarity=0.011 Sum_probs=45.4
Q ss_pred EEECCCCCCEEEEEeC-CC--cEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 21 VVFSPLSRGAFVTGDN-EG--YVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 21 v~f~p~~~~~~~t~s~-Dg--~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
.+|+| +++.|+.++. +| .|.+||+.+++.......+...+..+.|+|||+.|++++.+
T Consensus 41 ~~~Sp-Dg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~ 101 (388)
T 3pe7_A 41 KCFTR-DGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG 101 (388)
T ss_dssp CCBCT-TSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT
T ss_pred ccCCC-CCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC
Confidence 78999 9998888877 67 48888999887665555555555567899999999998865
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.79 E-value=0.00045 Score=50.22 Aligned_cols=63 Identities=11% Similarity=0.098 Sum_probs=46.9
Q ss_pred cCeEEEEECCCCCCEEEEEe-CCCcEEEEeCC-CCeee--EEec--CCCCCeEEEEECCCCCEEEEEeCC
Q 033677 16 VPVNDVVFSPLSRGAFVTGD-NEGYVAAWDAQ-SRRRL--FELP--RFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s-~Dg~I~iwD~~-~~~~~--~~~~--~~~~~v~~v~fspdg~~la~~s~d 79 (114)
..+..++|+| +++.|+++. .++.|.+||+. +++.. ..+. .+...+..++|+|||++|+++...
T Consensus 145 ~~~~~~~~sp-dG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~ 213 (365)
T 1jof_A 145 TGIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEA 213 (365)
T ss_dssp CCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETT
T ss_pred CcceEEEECC-CCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECC
Confidence 3578999999 998777665 46799999998 66532 2232 235668999999999998877653
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.75 E-value=2.9e-05 Score=60.38 Aligned_cols=63 Identities=19% Similarity=0.122 Sum_probs=49.8
Q ss_pred ecCeEEEEECCCCCCEEEEEeCC----------CcEEEEeCCC------CeeeEEec-CCCCCeEEEEECCCCCEEEEEe
Q 033677 15 LVPVNDVVFSPLSRGAFVTGDNE----------GYVAAWDAQS------RRRLFELP-RFSNSVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s~D----------g~I~iwD~~~------~~~~~~~~-~~~~~v~~v~fspdg~~la~~s 77 (114)
...+..++|+| +++.|+.++.| ..|.+||+.+ ++ ...+. .+...+..++|||||++||.++
T Consensus 129 ~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~SpDG~~la~~~ 206 (662)
T 3azo_A 129 GLRWADPVLLP-ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA-VRELSDDAHRFVTGPRLSPDGRQAVWLA 206 (662)
T ss_dssp CEEEEEEEEET-TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG-SEESSCSCSSEECCCEECTTSSEEEEEE
T ss_pred CccccCcEECC-CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc-eeEEEecCCCcccCceECCCCCEEEEEE
Confidence 44578999999 99999888876 5899999987 44 34455 5556778899999999999877
Q ss_pred CC
Q 033677 78 SC 79 (114)
Q Consensus 78 ~d 79 (114)
.+
T Consensus 207 ~~ 208 (662)
T 3azo_A 207 WD 208 (662)
T ss_dssp EC
T ss_pred CC
Confidence 54
No 168
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.74 E-value=0.00014 Score=51.86 Aligned_cols=61 Identities=15% Similarity=0.048 Sum_probs=45.7
Q ss_pred cCeEEEEECCCCCCEEEEEeCC---C--cEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNE---G--YVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~D---g--~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
..+..++|+| +++.|+..+.+ + .|.+||+.+++....... .. +..++|+|||+.||+++.+
T Consensus 59 ~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-~~-~~~~~wspdg~~l~~~~~~ 124 (347)
T 2gop_A 59 ENATMPRISP-DGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA-KN-IRSLEWNEDSRKLLIVGFK 124 (347)
T ss_dssp ESCEEEEECT-TSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-SE-EEEEEECTTSSEEEEEEEC
T ss_pred ccCCCeEECC-CCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC-CC-ccceeECCCCCEEEEEEcc
Confidence 4577899999 99888777654 3 477889888765544332 33 8999999999999888743
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.72 E-value=0.00056 Score=47.57 Aligned_cols=61 Identities=7% Similarity=0.066 Sum_probs=45.9
Q ss_pred cCeEEEEECCCCCCEEEEEeCCC-cEEEEeCCCCeeeEEecCC--CCCeEEEEECCCCCEEEEEeCC
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNEG-YVAAWDAQSRRRLFELPRF--SNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~Dg-~I~iwD~~~~~~~~~~~~~--~~~v~~v~fspdg~~la~~s~d 79 (114)
..+.+|++.| +++++++...++ .|.+||.. ++.+..+..+ ...+..++++|+|+++++ +.+
T Consensus 207 ~~p~~i~~d~-~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~ 270 (286)
T 1q7f_A 207 NYPIGVGINS-NGEILIADNHNNFNLTIFTQD-GQLISALESKVKHAQCFDVALMDDGSVVLA-SKD 270 (286)
T ss_dssp CSEEEEEECT-TCCEEEEECSSSCEEEEECTT-SCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETT
T ss_pred CCCcEEEECC-CCCEEEEeCCCCEEEEEECCC-CCEEEEEcccCCCCcceeEEECCCCcEEEE-CCC
Confidence 4578999999 899888888776 99999965 5555555433 234789999999987766 444
No 170
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.71 E-value=0.0004 Score=49.91 Aligned_cols=64 Identities=11% Similarity=0.073 Sum_probs=51.8
Q ss_pred ecCeEEEEECCCCCCEEEEEeCC------------------------CcEEEEeCCCCeeeEEec-CCCCCeEEEEECCC
Q 033677 15 LVPVNDVVFSPLSRGAFVTGDNE------------------------GYVAAWDAQSRRRLFELP-RFSNSVASLSYNHG 69 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s~D------------------------g~I~iwD~~~~~~~~~~~-~~~~~v~~v~fspd 69 (114)
...+.+|+++| +++++++...+ +.|.+||..+++.+..+. .....+..++++|+
T Consensus 23 l~~v~~va~d~-~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 23 PGQVSGVALDS-KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CSCEEEEEECT-TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred cCCceEEEECC-CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence 56799999999 99999888877 479999999888766554 34457899999999
Q ss_pred CCEEEEEeCC
Q 033677 70 GQLLAVASSC 79 (114)
Q Consensus 70 g~~la~~s~d 79 (114)
|+++++...+
T Consensus 102 g~l~v~d~~~ 111 (329)
T 3fvz_A 102 GNYWVTDVAL 111 (329)
T ss_dssp SCEEEEETTT
T ss_pred CCEEEEECCC
Confidence 9987766544
No 171
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.65 E-value=0.00017 Score=53.00 Aligned_cols=52 Identities=15% Similarity=0.245 Sum_probs=46.1
Q ss_pred eEEEEECCCCCCEEEEEeCCCcEEEEeCCCC--eeeEEecCCCCCeEEEEECCCCC
Q 033677 18 VNDVVFSPLSRGAFVTGDNEGYVAAWDAQSR--RRLFELPRFSNSVASLSYNHGGQ 71 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~--~~~~~~~~~~~~v~~v~fspdg~ 71 (114)
+.+|+|+| ++++|++++. +.|.+||..++ +.+..+.........++++|+|.
T Consensus 307 p~~ia~sp-dg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 307 ALSMTIDQ-QRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp CCEEEEET-TTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred eeEEEECC-CCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 67899999 9998888876 99999999999 88888767778889999999985
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.59 E-value=0.0002 Score=55.68 Aligned_cols=62 Identities=13% Similarity=0.036 Sum_probs=46.2
Q ss_pred CeEEEEECCCCCCEEEEEeCC--------CcEEEEeCC-CC---eeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 17 PVNDVVFSPLSRGAFVTGDNE--------GYVAAWDAQ-SR---RRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~D--------g~I~iwD~~-~~---~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
.+..++|+| +++.|+.++.+ ..|.+||+. ++ +.......+...+..++|+|||++++++..+
T Consensus 189 ~~~~~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~ 262 (662)
T 3azo_A 189 FVTGPRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRT 262 (662)
T ss_dssp EECCCEECT-TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTT
T ss_pred cccCceECC-CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCC
Confidence 466789999 99988877654 379999998 56 3333333456789999999999976666554
No 173
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.59 E-value=0.00021 Score=52.49 Aligned_cols=55 Identities=13% Similarity=0.206 Sum_probs=44.1
Q ss_pred EEECCCCCCEEEEEeC-----------CCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeC
Q 033677 21 VVFSPLSRGAFVTGDN-----------EGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 21 v~f~p~~~~~~~t~s~-----------Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~ 78 (114)
++|+| ++..++++.. ++.|.+||+.+++.+..+.... +..++|+|||++|+++..
T Consensus 259 ~a~~~-dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~ 324 (361)
T 2oiz_A 259 VGLHR-ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG 324 (361)
T ss_dssp EEEET-TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS
T ss_pred EEEec-CCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC
Confidence 78999 8766655432 3489999999999998887665 899999999998887663
No 174
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.56 E-value=0.00065 Score=47.51 Aligned_cols=62 Identities=6% Similarity=0.094 Sum_probs=49.4
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
.+..+++.+ +++++++...++.|.+||.++++.+..+......+.+++|+|+|+.|.+++..
T Consensus 227 ~p~~i~~d~-~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~ 288 (314)
T 1pjx_A 227 GADGMDFDE-DNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHE 288 (314)
T ss_dssp EEEEEEEBT-TCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCceEECC-CCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCC
Confidence 367899999 89888888788999999998776666665555779999999999966666544
No 175
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.54 E-value=0.00072 Score=53.50 Aligned_cols=61 Identities=5% Similarity=0.026 Sum_probs=46.2
Q ss_pred eEEEEECCCCCCEEEEEeCCCc----------------EEEEeCCCCee----eEEecCCCCCeEEEEECCCCCEEEEEe
Q 033677 18 VNDVVFSPLSRGAFVTGDNEGY----------------VAAWDAQSRRR----LFELPRFSNSVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~Dg~----------------I~iwD~~~~~~----~~~~~~~~~~v~~v~fspdg~~la~~s 77 (114)
+..++|+| +++.|+.++.++. |.+|++.+++. +.....+...+..+.|||||++|++++
T Consensus 173 ~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~ 251 (710)
T 2xdw_A 173 FSCMAWTH-DGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSI 251 (710)
T ss_dssp SCCEEECT-TSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred cceEEEEe-CCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEE
Confidence 45799999 9998888887765 99999987652 222223445578999999999999877
Q ss_pred CC
Q 033677 78 SC 79 (114)
Q Consensus 78 ~d 79 (114)
..
T Consensus 252 ~~ 253 (710)
T 2xdw_A 252 RE 253 (710)
T ss_dssp EC
T ss_pred Ec
Confidence 53
No 176
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.53 E-value=0.00038 Score=48.86 Aligned_cols=60 Identities=18% Similarity=0.257 Sum_probs=49.4
Q ss_pred cCeEEEEECCCCCC-EEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeC
Q 033677 16 VPVNDVVFSPLSRG-AFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 16 ~~V~~v~f~p~~~~-~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~ 78 (114)
.-..+++|+| +++ +++++..++.|..||..++ ...+......+..++|+|+|+++++...
T Consensus 28 ~~~eg~~~d~-~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~ 88 (296)
T 3e5z_A 28 TWTEGPVYVP-ARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHG 88 (296)
T ss_dssp SSEEEEEEEG-GGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETT
T ss_pred ccccCCeEeC-CCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecC
Confidence 3467899999 887 7888888999999999877 5556666678999999999998876654
No 177
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.51 E-value=0.00024 Score=51.68 Aligned_cols=62 Identities=13% Similarity=0.092 Sum_probs=44.6
Q ss_pred CeEEEE-ECCCCCCEEEEEeCC-C-----cEEEEeCC-CCeeeE---EecCCCCCeEEEEECC---CCCEEEEEeCC
Q 033677 17 PVNDVV-FSPLSRGAFVTGDNE-G-----YVAAWDAQ-SRRRLF---ELPRFSNSVASLSYNH---GGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~-f~p~~~~~~~t~s~D-g-----~I~iwD~~-~~~~~~---~~~~~~~~v~~v~fsp---dg~~la~~s~d 79 (114)
.+..++ |+| +++.|+++..+ . .|.+||+. +++... ........+..++|+| ||++|+++..+
T Consensus 255 ~~~~i~~~sp-dG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~ 330 (365)
T 1jof_A 255 YRADVCALTF-SGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQ 330 (365)
T ss_dssp EEEEEEEECT-TSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSS
T ss_pred ccccEEEECC-CCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcC
Confidence 378899 999 99877665542 2 89999996 555332 1333444567899999 89999988765
No 178
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.50 E-value=9.6e-05 Score=58.87 Aligned_cols=59 Identities=12% Similarity=0.151 Sum_probs=46.9
Q ss_pred eEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCC-----CeEEEEECCCCCEEEEEeCC
Q 033677 18 VNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSN-----SVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~-----~v~~v~fspdg~~la~~s~d 79 (114)
...+.|.| ++++|+++ ||.|++||+.++++...+..+.. ....++|||||++||+++.+
T Consensus 19 ~~~~~w~~-dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~ 82 (740)
T 4a5s_A 19 LYSLRWIS-DHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNY 82 (740)
T ss_dssp CCCEEECS-SSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEE
T ss_pred ccccEECC-CCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECC
Confidence 45799999 88888776 99999999999987766665532 22458999999999988763
No 179
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.47 E-value=0.00018 Score=51.93 Aligned_cols=69 Identities=7% Similarity=0.265 Sum_probs=47.8
Q ss_pred EECCCCCCEEEEE---------eCCCcEEEEeCCCCeeeEEecCCCC-----------CeEEEEECCCCCEEEEEeCCCc
Q 033677 22 VFSPLSRGAFVTG---------DNEGYVAAWDAQSRRRLFELPRFSN-----------SVASLSYNHGGQLLAVASSCTY 81 (114)
Q Consensus 22 ~f~p~~~~~~~t~---------s~Dg~I~iwD~~~~~~~~~~~~~~~-----------~v~~v~fspdg~~la~~s~d~~ 81 (114)
+|+| +++.|+.. ..+..|.+||+.+++. ..+..+.. .+..++|+|||+.|+.++..
T Consensus 296 ~~sp-dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~-- 371 (388)
T 3pe7_A 296 LMVG-DGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDV-- 371 (388)
T ss_dssp EEEE-EECCC------------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT--
T ss_pred eEcc-CCCcceeEeeeccccccCCCCEEEEEeccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEecC--
Confidence 6888 87766543 4567999999998764 34444443 57789999999999887744
Q ss_pred ccccccCCCCcEEEEEcCc
Q 033677 82 QEATVIEEPPQIFIIRIDD 100 (114)
Q Consensus 82 ~~~~~~~~~~~i~i~~~~~ 100 (114)
.+...||+.++.+
T Consensus 372 ------~g~~~l~~~~l~~ 384 (388)
T 3pe7_A 372 ------HGKPALYLATLPE 384 (388)
T ss_dssp ------TSSCEEEEEECCG
T ss_pred ------CCceeEEEEECCh
Confidence 2346688877754
No 180
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.47 E-value=0.001 Score=46.27 Aligned_cols=62 Identities=16% Similarity=0.224 Sum_probs=48.4
Q ss_pred cCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCC--CCCeEEEEECCCCCEEEEEeCC
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRF--SNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~--~~~v~~v~fspdg~~la~~s~d 79 (114)
..+.+|+++| +++++++...++.|.+||.. ++.+..+... ...+..++++|+|+++++...+
T Consensus 164 ~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~ 227 (286)
T 1q7f_A 164 EFPNGVVVND-KQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHN 227 (286)
T ss_dssp SSEEEEEECS-SSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSS
T ss_pred CCcEEEEECC-CCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCC
Confidence 4578999999 88888888889999999985 4455555433 3578999999999988877544
No 181
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=97.44 E-value=0.0013 Score=49.65 Aligned_cols=61 Identities=15% Similarity=0.046 Sum_probs=48.7
Q ss_pred eecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCee--eEEe------c---CCCCCeEEEEECCCCCEEEEEe
Q 033677 14 HLVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRR--LFEL------P---RFSNSVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 14 ~~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~--~~~~------~---~~~~~v~~v~fspdg~~la~~s 77 (114)
....|.+++|+| ++ ++.|..||.+++|+....+. ...+ . ++...|.+|.|.+++.++++-.
T Consensus 161 ~~~~Vs~v~WSp-kG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 161 LAQNVTSFDVTN-SQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp EEESEEEEEECS-SE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred ccCCceEEEEcC-Cc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 456799999999 77 67899999999999987775 4455 2 2567899999999998887544
No 182
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.44 E-value=0.00085 Score=47.52 Aligned_cols=62 Identities=15% Similarity=0.132 Sum_probs=50.9
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEEC-CCCCEEEEEeCC
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYN-HGGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fs-pdg~~la~~s~d 79 (114)
.+..+++.+ +++++++...++.|..||.++++.+..+......+++++|. |+++.|.+++..
T Consensus 200 ~p~g~~~d~-~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 200 IPDGMCIDA-EGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp EEEEEEEBT-TSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred CCCeeEECC-CCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcCC
Confidence 357899999 89888888888899999999888887777666779999998 888877666654
No 183
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.41 E-value=0.00042 Score=49.28 Aligned_cols=57 Identities=7% Similarity=0.124 Sum_probs=43.4
Q ss_pred eEEEEECCCCCCEEEEEeCC---------------------------CcEEEEeCCCCeeeEEecCCCCCeEEEEECCCC
Q 033677 18 VNDVVFSPLSRGAFVTGDNE---------------------------GYVAAWDAQSRRRLFELPRFSNSVASLSYNHGG 70 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~D---------------------------g~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg 70 (114)
+..++|+| +++.|+.++.+ ..|.+||+.+++.+..+.. . .+..++|+|||
T Consensus 106 ~~~~~wsp-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg 182 (347)
T 2gop_A 106 IRSLEWNE-DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK 182 (347)
T ss_dssp EEEEEECT-TSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE
T ss_pred ccceeECC-CCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe
Confidence 78899999 99887776632 5788999998876344444 3 78899999999
Q ss_pred CEEEEEeC
Q 033677 71 QLLAVASS 78 (114)
Q Consensus 71 ~~la~~s~ 78 (114)
+++++..
T Consensus 183 -~~~~~~~ 189 (347)
T 2gop_A 183 -IVVNVPH 189 (347)
T ss_dssp -EEEEEEC
T ss_pred -EEEEEec
Confidence 7766644
No 184
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.39 E-value=0.00042 Score=54.81 Aligned_cols=60 Identities=10% Similarity=0.000 Sum_probs=46.9
Q ss_pred EEEEECCCCCCEEEEEeCCCc-------------EEEEeCCCCe----eeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 19 NDVVFSPLSRGAFVTGDNEGY-------------VAAWDAQSRR----RLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 19 ~~v~f~p~~~~~~~t~s~Dg~-------------I~iwD~~~~~----~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
..++|+| +++.|+.++.|.. |++|++.++. .+.....+...+..+.|||||++|++++.+
T Consensus 171 ~~~~wsp-Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 247 (695)
T 2bkl_A 171 ATPKWTP-DSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILR 247 (695)
T ss_dssp CCCEECT-TSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEE
T ss_pred cceEEec-CCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeC
Confidence 6799999 9999988888776 9999998765 233333445678899999999988877644
No 185
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.38 E-value=0.00028 Score=50.74 Aligned_cols=60 Identities=3% Similarity=-0.051 Sum_probs=42.4
Q ss_pred eEEEEECCCCCCEEEEEeCC---CcEEEEeCCCCeeeEEecCCCCC-eEEEEECCCCCEEEEEeCC
Q 033677 18 VNDVVFSPLSRGAFVTGDNE---GYVAAWDAQSRRRLFELPRFSNS-VASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~D---g~I~iwD~~~~~~~~~~~~~~~~-v~~v~fspdg~~la~~s~d 79 (114)
+..++|+| +++.|+....+ ..|.+||+.+++... +...... ...+.|+|||+.||.++.+
T Consensus 38 ~~~~~~Sp-dG~~l~~~~~~~g~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~spdg~~l~~~~~~ 101 (396)
T 3c5m_A 38 FYQKCFTQ-DGKKLLFAGDFDGNRNYYLLNLETQQAVQ-LTEGKGDNTFGGFISTDERAFFYVKNE 101 (396)
T ss_dssp TTSCCBCT-TSCEEEEEECTTSSCEEEEEETTTTEEEE-CCCSSCBCTTTCEECTTSSEEEEEETT
T ss_pred eecCcCCC-CCCEEEEEEecCCCceEEEEECCCCcEEE-eecCCCCccccceECCCCCEEEEEEcC
Confidence 56788999 99887666543 368888998887543 3333222 3347899999999988766
No 186
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=97.38 E-value=0.00046 Score=52.11 Aligned_cols=54 Identities=19% Similarity=0.188 Sum_probs=42.1
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
+|.++.+.+ . .|+++..||.|.+||+.++.... +...|++++|||+| +++|..|
T Consensus 128 ~v~~i~~~~-p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~d 181 (388)
T 1xip_A 128 PVFQLKNVN-N--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKD 181 (388)
T ss_dssp CEEEEEECS-S--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETT
T ss_pred ceeeEEecC-C--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcC
Confidence 467777766 3 38889999999999999877543 34579999999999 5566666
No 187
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.37 E-value=0.0025 Score=43.57 Aligned_cols=63 Identities=11% Similarity=0.006 Sum_probs=47.2
Q ss_pred cCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
..+.+|++.| ++.++++...++.|.+||................+..++++|+|+++++...+
T Consensus 192 ~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~ 254 (270)
T 1rwi_B 192 TAPWGIAVDE-AGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGN 254 (270)
T ss_dssp CSEEEEEECT-TCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGG
T ss_pred CCceEEEECC-CCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCC
Confidence 4578999999 88888888888999999987654332222233568999999999977766554
No 188
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.37 E-value=0.0024 Score=50.19 Aligned_cols=61 Identities=13% Similarity=0.062 Sum_probs=49.6
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCC--CCeeeEEecCCCCCeEEEEEC----CCCCEEEEEeCC
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQ--SRRRLFELPRFSNSVASLSYN----HGGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~--~~~~~~~~~~~~~~v~~v~fs----pdg~~la~~s~d 79 (114)
.+..+.|+| +++++++++.|+.|.+||+. +++.+..+.. ......++|+ |||++++++...
T Consensus 198 ~p~~v~~Sp-DGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~ 264 (567)
T 1qks_A 198 AVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-GSEARSIETSKMEGWEDKYAIAGAYW 264 (567)
T ss_dssp CEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEE
T ss_pred CccceEECC-CCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-CCCCceeEEccccCCCCCEEEEEEcc
Confidence 456899999 99999999999999999996 7777776654 3346799999 699998887644
No 189
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.25 E-value=0.0017 Score=45.96 Aligned_cols=61 Identities=10% Similarity=0.110 Sum_probs=46.0
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCC------CeEEEEECCCCCEEEEEeCC
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSN------SVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~------~v~~v~fspdg~~la~~s~d 79 (114)
.+..+++.+ +++++++...++.|.+||.+ ++.+..+..... .+.+++|+|||..|++++.+
T Consensus 234 ~~~~i~~d~-~G~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 234 GPDSCCIDS-DDNLYVAMYGQGRVLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEEEEEBT-TCCEEEEEETTTEEEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred CCCceEECC-CCCEEEEEcCCCEEEEECCC-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 467899999 89888888888999999984 555555543322 57899999998777666544
No 190
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.17 E-value=0.0011 Score=47.09 Aligned_cols=48 Identities=17% Similarity=0.250 Sum_probs=42.0
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeeeEEecCCC-CCeEEEEECCCCCEEEE
Q 033677 28 RGAFVTGDNEGYVAAWDAQSRRRLFELPRFS-NSVASLSYNHGGQLLAV 75 (114)
Q Consensus 28 ~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~-~~v~~v~fspdg~~la~ 75 (114)
+++|++++.|+.|.+||.++++.+.++..+. ..+..+.++|+|++|++
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs 53 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS 53 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe
Confidence 5789999999999999999999998887654 46889999999999884
No 191
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.15 E-value=0.0016 Score=45.62 Aligned_cols=57 Identities=11% Similarity=0.102 Sum_probs=45.3
Q ss_pred eEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEE-CCCCCEEEEEeCC
Q 033677 18 VNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSY-NHGGQLLAVASSC 79 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~f-spdg~~la~~s~d 79 (114)
+.++++.+ +++++++. ++.|.+||.+ ++.+..+..... +++++| +|+++.|++++.+
T Consensus 220 p~~i~~d~-~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~ 277 (296)
T 3e5z_A 220 TDGLRVDA-GGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVST 277 (296)
T ss_dssp CCSEEEBT-TSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETT
T ss_pred CCeEEECC-CCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCC
Confidence 46799999 88877666 7899999987 666666665555 899999 6899988888766
No 192
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.05 E-value=0.0015 Score=52.04 Aligned_cols=81 Identities=9% Similarity=0.045 Sum_probs=52.0
Q ss_pred cCeEEEEECCCCCCEEEEEeCC-----CcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCCCcccc---ccc
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNE-----GYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSCTYQEA---TVI 87 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~D-----g~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d~~~~~---~~~ 87 (114)
..+..++|+| +++.|+.++.+ ..|++||+.+++.+.... ....+..++|+|| +.|+.++.+.-..+ .+.
T Consensus 163 ~~~~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~ 239 (741)
T 1yr2_A 163 TALDAWAASD-DGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQAL 239 (741)
T ss_dssp EEEEEEEECT-TSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC--------C
T ss_pred EEEEeEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCcccccccccC
Confidence 3678899999 99988776554 359999999987654311 1111357899999 99998876531111 112
Q ss_pred CCCCcEEEEEcC
Q 033677 88 EEPPQIFIIRID 99 (114)
Q Consensus 88 ~~~~~i~i~~~~ 99 (114)
..+..||++.+.
T Consensus 240 ~~~~~v~~~~lg 251 (741)
T 1yr2_A 240 NYNQTVWLHRLG 251 (741)
T ss_dssp CCCCEEEEEETT
T ss_pred CCCCEEEEEECC
Confidence 334557777664
No 193
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.04 E-value=0.0053 Score=43.96 Aligned_cols=62 Identities=13% Similarity=0.117 Sum_probs=47.8
Q ss_pred ecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCe-eeEEe---------cCCCCCeEEEEECC-CCCEEEEEe
Q 033677 15 LVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRR-RLFEL---------PRFSNSVASLSYNH-GGQLLAVAS 77 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~-~~~~~---------~~~~~~v~~v~fsp-dg~~la~~s 77 (114)
...+.+|+++| +++++++...++.|.+||..... .+..+ ......+..|+|+| +|.++++.+
T Consensus 90 ~~~p~gia~d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~ 162 (329)
T 3fvz_A 90 FYLPHGLSIDT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDG 162 (329)
T ss_dssp CSSEEEEEECT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEEC
T ss_pred cCCceEEEECC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeC
Confidence 34678999999 99999999889999999986542 44444 23344688999999 788887765
No 194
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.02 E-value=0.00097 Score=52.92 Aligned_cols=82 Identities=13% Similarity=0.210 Sum_probs=52.7
Q ss_pred ecCeEEEEECCCCCCEEEE-----EeCCCcEEEEeCCCCeeeEE-ecCCCCCeEEEEECCCCCEEEEEeCCCcccc--cc
Q 033677 15 LVPVNDVVFSPLSRGAFVT-----GDNEGYVAAWDAQSRRRLFE-LPRFSNSVASLSYNHGGQLLAVASSCTYQEA--TV 86 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t-----~s~Dg~I~iwD~~~~~~~~~-~~~~~~~v~~v~fspdg~~la~~s~d~~~~~--~~ 86 (114)
...+.+++|+| ++++|+- |+.+..|++||+.+++.+.. +... ....++|+ ||+.|+.++.+.-..+ .+
T Consensus 128 ~~~l~~~~~Sp-Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~--k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 128 TTALDQLSFSR-DGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV--KFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp CCEEEEEEECT-TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE--ESCCCEEE-TTTEEEEEESSCCC------
T ss_pred cEEEEEEEECC-CCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc--eeccEEEe-CCCEEEEEEecCcccccccc
Confidence 34688899999 9987763 33335799999999875442 1111 12467999 9999998887632111 11
Q ss_pred cCCCCcEEEEEcCc
Q 033677 87 IEEPPQIFIIRIDD 100 (114)
Q Consensus 87 ~~~~~~i~i~~~~~ 100 (114)
...+..||++.+..
T Consensus 204 ~~~~~~v~~~~lgt 217 (693)
T 3iuj_A 204 RTDQHKVYFHRLGT 217 (693)
T ss_dssp -CCCCEEEEEETTS
T ss_pred cCCCcEEEEEECCC
Confidence 24456688877644
No 195
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.95 E-value=0.0019 Score=46.35 Aligned_cols=58 Identities=7% Similarity=0.032 Sum_probs=40.0
Q ss_pred CeEEEEECCCCCCEEEEEeCC-----CcEEEEeCCCCeeeEEecCCCCCeEEEEECC-CCCEEEEEeC
Q 033677 17 PVNDVVFSPLSRGAFVTGDNE-----GYVAAWDAQSRRRLFELPRFSNSVASLSYNH-GGQLLAVASS 78 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~D-----g~I~iwD~~~~~~~~~~~~~~~~v~~v~fsp-dg~~la~~s~ 78 (114)
.+..++|+| +++.|+.++.+ +.|.+||+.+++...... ... .. +.|+| ||++++++..
T Consensus 239 ~~~~~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~-~~-~~~s~~dg~~l~~~~~ 302 (396)
T 3c5m_A 239 SCTHEFWIP-DGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MPP-CS-HLMSNFDGSLMVGDGC 302 (396)
T ss_dssp EEEEEEECT-TSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CCS-EE-EEEECSSSSEEEEEEC
T ss_pred cccceEECC-CCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CCC-CC-CCccCCCCceEEEecC
Confidence 477889999 98866665443 349999998876433221 222 33 89999 9998887653
No 196
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.91 E-value=0.0058 Score=48.64 Aligned_cols=59 Identities=14% Similarity=0.162 Sum_probs=42.4
Q ss_pred EEEEECCCCCCEEEEEeCCCc--------------EEEEeCCCCee----eEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 19 NDVVFSPLSRGAFVTGDNEGY--------------VAAWDAQSRRR----LFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 19 ~~v~f~p~~~~~~~t~s~Dg~--------------I~iwD~~~~~~----~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
..++|+| + +.|+.++.|+. |.+|++.++.. +.....+...+..+.|||||++|++.+.+
T Consensus 212 ~~~~wsp-D-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 288 (741)
T 1yr2_A 212 SGLAWLG-N-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSE 288 (741)
T ss_dssp CCCEEST-T-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEEC
T ss_pred ccEEEEC-C-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEc
Confidence 4788999 8 88777776654 88999977642 22222333358899999999999887755
No 197
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=96.91 E-value=0.0056 Score=45.35 Aligned_cols=58 Identities=12% Similarity=0.035 Sum_probs=44.5
Q ss_pred EEEECCCCCCEEEEEe----------CCCcEEEEeCCCCeeeEEecCC-------CCCeEEEEECCCCCEEEEEeC
Q 033677 20 DVVFSPLSRGAFVTGD----------NEGYVAAWDAQSRRRLFELPRF-------SNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 20 ~v~f~p~~~~~~~t~s----------~Dg~I~iwD~~~~~~~~~~~~~-------~~~v~~v~fspdg~~la~~s~ 78 (114)
.++++| +++.++.+. .++.|.+||..+.+.+..+... ......++|+|||++|+++..
T Consensus 70 ~i~~sp-Dg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~ 144 (373)
T 2mad_H 70 NPVAAH-SGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQF 144 (373)
T ss_pred CeEECC-CCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEec
Confidence 899999 998887775 3678999999988777665422 123458999999999888763
No 198
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.81 E-value=0.0057 Score=41.74 Aligned_cols=62 Identities=13% Similarity=0.156 Sum_probs=46.6
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
.+.+|++.| +++++++...++.|.+||................+..++++++|.++++...+
T Consensus 151 ~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~ 212 (270)
T 1rwi_B 151 DPDGVAVDN-SGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNT 212 (270)
T ss_dssp SCCCEEECT-TCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTT
T ss_pred CceeEEEeC-CCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCC
Confidence 567899999 88888888778899999988765443322333668899999999877665433
No 199
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.76 E-value=0.014 Score=41.83 Aligned_cols=60 Identities=13% Similarity=0.130 Sum_probs=46.5
Q ss_pred eEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEEC-CCCCEEEEEeCC
Q 033677 18 VNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYN-HGGQLLAVASSC 79 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fs-pdg~~la~~s~d 79 (114)
+.++++.+ +++++++...++.|.+||. +++.+..+......+++++|+ |++..|.+++..
T Consensus 232 p~gi~~d~-~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 232 MDGSVCDA-EGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp EEEEEECT-TSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred CCeeEECC-CCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEecC
Confidence 56899999 8888887777789999998 466666666555679999998 898877666544
No 200
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=96.65 E-value=0.03 Score=41.36 Aligned_cols=56 Identities=14% Similarity=0.116 Sum_probs=42.8
Q ss_pred EEEECCCCCCEEEEEeC----------CCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCC-EEEEEe
Q 033677 20 DVVFSPLSRGAFVTGDN----------EGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQ-LLAVAS 77 (114)
Q Consensus 20 ~v~f~p~~~~~~~t~s~----------Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~-~la~~s 77 (114)
.++++| ++..++.+.. ++.|.+.|..+++.+..+. .......++|+|||+ +++++.
T Consensus 271 ~~~~s~-d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~ 337 (373)
T 2mad_H 271 QVAYLK-SSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYALS 337 (373)
T ss_pred eEEECC-CCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CCCCcCeEEECCCCCeEEEEEc
Confidence 478899 8776666543 3579999999999888885 344678999999999 666654
No 201
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.64 E-value=0.0021 Score=48.06 Aligned_cols=57 Identities=14% Similarity=0.089 Sum_probs=44.9
Q ss_pred EEEECCCCCCEEEEEe----------CCCcEEEEeCCCCeeeEEecCC-------CCCeEEEEECCCCCEEEEEe
Q 033677 20 DVVFSPLSRGAFVTGD----------NEGYVAAWDAQSRRRLFELPRF-------SNSVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 20 ~v~f~p~~~~~~~t~s----------~Dg~I~iwD~~~~~~~~~~~~~-------~~~v~~v~fspdg~~la~~s 77 (114)
.+.++| ++..++++. .++.|.+||..+++.+.++... ......++|+|||++++++.
T Consensus 69 ~i~~sp-Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan 142 (368)
T 1mda_H 69 LAVAGH-SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFL 142 (368)
T ss_dssp EEEECT-TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEE
T ss_pred ceEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEc
Confidence 799999 887766664 3679999999999988887532 12356899999999888775
No 202
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.57 E-value=0.029 Score=38.38 Aligned_cols=60 Identities=12% Similarity=0.171 Sum_probs=45.7
Q ss_pred cCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeE-EecCCCCCeEEEEECCCCCEEEEEe
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLF-ELPRFSNSVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~-~~~~~~~~v~~v~fspdg~~la~~s 77 (114)
..+.+|++.| +++++++...++.|.+||.. ++... ........+..++++++|.++++..
T Consensus 15 ~~~~~i~~d~-~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 75 (299)
T 2z2n_A 15 TGPYGITVSD-KGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTEN 75 (299)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEET
T ss_pred CCccceEECC-CCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCC
Confidence 4589999999 88888877778899999988 54322 1223456789999999999877654
No 203
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.52 E-value=0.0085 Score=43.06 Aligned_cols=61 Identities=10% Similarity=-0.022 Sum_probs=46.5
Q ss_pred eEEEEECCCCCCEEEEEeCC----------CcEEEEeCCCCeeeEEecCC-CCCeEEEEECCCCCEEEEEeCC
Q 033677 18 VNDVVFSPLSRGAFVTGDNE----------GYVAAWDAQSRRRLFELPRF-SNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~D----------g~I~iwD~~~~~~~~~~~~~-~~~v~~v~fspdg~~la~~s~d 79 (114)
...+++.| ++++++++..+ +.|.+||..+++....+... ...+..++|+|+++.|.++...
T Consensus 174 p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~~ 245 (328)
T 3dsm_A 174 PTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINND 245 (328)
T ss_dssp BCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESSS
T ss_pred ccceEEcC-CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEccE
Confidence 45788999 88877776654 78999999998877666422 3468899999999888776543
No 204
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=96.49 E-value=0.035 Score=39.99 Aligned_cols=62 Identities=8% Similarity=0.087 Sum_probs=46.4
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecC-CCCCeEEEEECCCCCEEEEEeCC
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPR-FSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~-~~~~v~~v~fspdg~~la~~s~d 79 (114)
....+++.+ +++++++...++.|.+||..+++....... ....++.++|.++|+++++.+..
T Consensus 249 ~pdgia~d~-~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 249 ICDGISIDK-DHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp SCSCEEECT-TCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCG
T ss_pred CCceEEECC-CCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcc
Confidence 356799999 899999999999999999855653322222 23458899999999887776643
No 205
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.48 E-value=0.017 Score=40.88 Aligned_cols=58 Identities=10% Similarity=0.071 Sum_probs=47.7
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCC-CCCeEEEEECCCCCEEEEEeC
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRF-SNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~-~~~v~~v~fspdg~~la~~s~ 78 (114)
.+.++.+.| ++++|+ +.++.|..||. +++.+.++... ...+.++.+.|+|+++++.+.
T Consensus 38 ~~~~~~~~p-dG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~ 96 (276)
T 3no2_A 38 ECNSVAATK-AGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCG 96 (276)
T ss_dssp CCCEEEECT-TSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEES
T ss_pred CCcCeEECC-CCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecC
Confidence 477899999 999888 34778999999 78888888754 357889999999999988776
No 206
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.47 E-value=0.036 Score=37.90 Aligned_cols=62 Identities=10% Similarity=0.138 Sum_probs=45.0
Q ss_pred cCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeC
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~ 78 (114)
..+.+|++.| ++.++++...++.|..||................+..+++.|+|.++++...
T Consensus 57 ~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~ 118 (299)
T 2z2n_A 57 AKVMCLTISS-DGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMN 118 (299)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETT
T ss_pred CceeeEEECC-CCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecC
Confidence 3578999999 8888888777889999998632212222234557899999999988776543
No 207
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.40 E-value=0.011 Score=41.11 Aligned_cols=61 Identities=13% Similarity=0.261 Sum_probs=44.8
Q ss_pred cCeEEEEECCCCCCEEEE-------EeCCCcEEEEeCCCCeeeEEecC-----CCCCeEEEEECCC-CCEEEEEeC
Q 033677 16 VPVNDVVFSPLSRGAFVT-------GDNEGYVAAWDAQSRRRLFELPR-----FSNSVASLSYNHG-GQLLAVASS 78 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t-------~s~Dg~I~iwD~~~~~~~~~~~~-----~~~~v~~v~fspd-g~~la~~s~ 78 (114)
....+++|.+ ++.++++ ...++.|.+||..+++... +.. +...+..++++++ |+++++...
T Consensus 18 ~~~~~~~~~~-~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~ 91 (314)
T 1pjx_A 18 PGAEGPVFDK-NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTV-ICKPEVNGYGGIPAGCQCDRDANQLFVADMR 91 (314)
T ss_dssp TTCEEEEECT-TSCEEEEETTCEETTEECCEEEEECTTTCCEEE-EECCEETTEECCEEEEEECSSSSEEEEEETT
T ss_pred CCccCceECC-CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEE-EEecccCCCCCCCceEEEecCCCcEEEEECC
Confidence 3467999999 8888877 5678899999988776432 222 3466899999999 876665543
No 208
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.40 E-value=0.018 Score=42.97 Aligned_cols=61 Identities=5% Similarity=-0.084 Sum_probs=46.9
Q ss_pred ecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeC
Q 033677 15 LVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~ 78 (114)
......|+|+| +++++++...++.|++||..++........ ..... ++|+|+|+.|+++..
T Consensus 130 ~~~P~~la~d~-~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~ 190 (409)
T 3hrp_A 130 FKYMWGIAAVG-NNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGW 190 (409)
T ss_dssp CCCEEEEEECS-TTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBS
T ss_pred cCCceEEEEeC-CCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEec
Confidence 45678999999 888888888889999999998775544443 33334 999999998877765
No 209
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=96.30 E-value=0.0051 Score=46.41 Aligned_cols=58 Identities=12% Similarity=0.068 Sum_probs=44.1
Q ss_pred EEEECCCCCCEEEEEe----------CCCcEEEEeCCCCeeeEEecCC-------CCCeEEEEECCCCCEEEEEeC
Q 033677 20 DVVFSPLSRGAFVTGD----------NEGYVAAWDAQSRRRLFELPRF-------SNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 20 ~v~f~p~~~~~~~t~s----------~Dg~I~iwD~~~~~~~~~~~~~-------~~~v~~v~fspdg~~la~~s~ 78 (114)
.++++| +++.++++. .++.|.+||..+.+.+..+.-. ......++|+|||+++.++..
T Consensus 82 ~va~sp-DG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~ 156 (386)
T 3sjl_D 82 NPVVAD-DGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQF 156 (386)
T ss_dssp EEEECT-TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEEC
T ss_pred cEEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEc
Confidence 499999 987766654 3678999999999888776421 124567999999998887753
No 210
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=96.23 E-value=0.015 Score=45.64 Aligned_cols=52 Identities=19% Similarity=0.056 Sum_probs=42.8
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 27 SRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 27 ~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
.+.++++...++.|.++|..+++.+..+. ....+..+.|||||+++.+++.|
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~-~g~~p~~v~~SpDGr~lyv~~~d 217 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLD-TGYAVHISRLSASGRYLFVIGRD 217 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSCEEEEEETT
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEe-CCCCccceEECCCCCEEEEEcCC
Confidence 34567788889999999999998887775 34467799999999998888766
No 211
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.07 E-value=0.1 Score=36.53 Aligned_cols=59 Identities=17% Similarity=0.124 Sum_probs=41.2
Q ss_pred cCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCC----CCCeEEEEECCCCCEEEEEe
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRF----SNSVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~----~~~v~~v~fspdg~~la~~s 77 (114)
..+.++++.| +++++++. ++.|.+||.++++........ ...++.++++|+|+++++..
T Consensus 54 ~~~~~i~~~~-dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~ 116 (297)
T 3g4e_A 54 APVSSVALRQ-SGGYVATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTM 116 (297)
T ss_dssp SCEEEEEEBT-TSSEEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEE
T ss_pred CceEEEEECC-CCCEEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecC
Confidence 4588999999 88865543 567899999887643322211 23478899999999776543
No 212
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=95.95 E-value=0.037 Score=39.00 Aligned_cols=59 Identities=7% Similarity=-0.024 Sum_probs=44.4
Q ss_pred CeEEEEECCCCCC-EEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeC
Q 033677 17 PVNDVVFSPLSRG-AFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 17 ~V~~v~f~p~~~~-~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~ 78 (114)
...+..|.| +++ ++++...++.|..|+.. ++ ...+......+..++++++|+++++...
T Consensus 46 ~~egp~~~~-~g~~l~~~d~~~~~i~~~~~~-g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~ 105 (305)
T 3dr2_A 46 WSEGPAWWE-AQRTLVWSDLVGRRVLGWRED-GT-VDVLLDATAFTNGNAVDAQQRLVHCEHG 105 (305)
T ss_dssp SEEEEEEEG-GGTEEEEEETTTTEEEEEETT-SC-EEEEEESCSCEEEEEECTTSCEEEEETT
T ss_pred CccCCeEeC-CCCEEEEEECCCCEEEEEeCC-CC-EEEEeCCCCccceeeECCCCCEEEEECC
Confidence 457889999 887 67788788999999984 43 3344445567899999999997765443
No 213
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=95.93 E-value=0.045 Score=39.39 Aligned_cols=62 Identities=13% Similarity=0.126 Sum_probs=43.4
Q ss_pred CeEEEEECCCCC-CEEEEEe---CCCcEEEEeCCCCeeeEEecCC-----------------------------CCCeEE
Q 033677 17 PVNDVVFSPLSR-GAFVTGD---NEGYVAAWDAQSRRRLFELPRF-----------------------------SNSVAS 63 (114)
Q Consensus 17 ~V~~v~f~p~~~-~~~~t~s---~Dg~I~iwD~~~~~~~~~~~~~-----------------------------~~~v~~ 63 (114)
.+++|++.| ++ ..+++-. .++.|.+||..+++....+..+ ...+..
T Consensus 121 ~~~~v~vd~-~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~g 199 (343)
T 2qe8_A 121 FVNDLAVDL-IHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNG 199 (343)
T ss_dssp CCCEEEEET-TTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEE
T ss_pred ccceEEEec-CCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccce
Confidence 358999998 54 4456655 5789999999877655444221 123688
Q ss_pred EEECCCCCEEEEEeCC
Q 033677 64 LSYNHGGQLLAVASSC 79 (114)
Q Consensus 64 v~fspdg~~la~~s~d 79 (114)
|+|+|||+.|.++...
T Consensus 200 ia~s~dg~~ly~~~~~ 215 (343)
T 2qe8_A 200 IVLDAENEWLYLSPMH 215 (343)
T ss_dssp EEECTTSCEEEEEESS
T ss_pred eEeccCCCEEEEEeCC
Confidence 9999999988776543
No 214
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.89 E-value=0.1 Score=35.55 Aligned_cols=60 Identities=10% Similarity=0.129 Sum_probs=44.8
Q ss_pred cCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeee-EEecCCCCCeEEEEECCCCCEEEEEe
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRL-FELPRFSNSVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~-~~~~~~~~~v~~v~fspdg~~la~~s 77 (114)
..+.+|++.+ +++++++...++.|..||.. ++.. .........+..+++.++|.++++..
T Consensus 62 ~~~~~i~~~~-~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 122 (300)
T 2qc5_A 62 AKVMCLIVSS-LGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQL 122 (300)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEET
T ss_pred CcceeEEECC-CCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEcc
Confidence 4578999999 88888887778899999988 5432 22222346789999999998777654
No 215
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=95.86 E-value=0.0085 Score=45.68 Aligned_cols=58 Identities=10% Similarity=0.040 Sum_probs=44.7
Q ss_pred EEEECCCCCCEEEEEe----------CCCcEEEEeCCCCeeeEEecCC-------CCCeEEEEECCCCCEEEEEeC
Q 033677 20 DVVFSPLSRGAFVTGD----------NEGYVAAWDAQSRRRLFELPRF-------SNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 20 ~v~f~p~~~~~~~t~s----------~Dg~I~iwD~~~~~~~~~~~~~-------~~~v~~v~fspdg~~la~~s~ 78 (114)
.++++| +++.++++. .++.|.++|..+++.+..+.-. ......+.|+|||+++.++..
T Consensus 122 gia~Sp-Dgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~ 196 (426)
T 3c75_H 122 HPVAAE-DGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQF 196 (426)
T ss_dssp EEEECT-TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEEC
T ss_pred ceEECC-CCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEec
Confidence 899999 887666654 3678999999999888776421 234567999999998888763
No 216
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.73 E-value=0.13 Score=35.01 Aligned_cols=59 Identities=2% Similarity=-0.032 Sum_probs=43.4
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeE-EecCCCCCeEEEEECCCCCEEEEEe
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLF-ELPRFSNSVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~-~~~~~~~~v~~v~fspdg~~la~~s 77 (114)
.+.++++.+ +++++++....+.|.+||. +++... ........+..++++++|+++++..
T Consensus 189 ~~~~i~~d~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 248 (300)
T 2qc5_A 189 APVGITSGN-DGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEW 248 (300)
T ss_dssp CEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEET
T ss_pred CcceEEECC-CCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEecc
Confidence 478999999 8888887777788999998 444332 2333456788999999998766553
No 217
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=95.71 E-value=0.15 Score=37.93 Aligned_cols=60 Identities=8% Similarity=0.061 Sum_probs=45.1
Q ss_pred cCeEEEEECCCCCCEEEEEe-CCCcEEEEeCCCCeeeEEecCC---------------CCCeEEEEECCCCCEEEEEe
Q 033677 16 VPVNDVVFSPLSRGAFVTGD-NEGYVAAWDAQSRRRLFELPRF---------------SNSVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s-~Dg~I~iwD~~~~~~~~~~~~~---------------~~~v~~v~fspdg~~la~~s 77 (114)
....+|++.| +++++++-+ .++.|+.||..++.. ..+.+. ......++++|+|.++++-.
T Consensus 323 ~~P~gia~d~-dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~ 398 (409)
T 3hrp_A 323 AQPNGMTVDE-DGNFYIVDGFKGYCLRKLDILDGYV-STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEA 398 (409)
T ss_dssp SSEEEEEECT-TCCEEEEETTTTCEEEEEETTTTEE-EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEES
T ss_pred CCCeEEEEeC-CCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEEC
Confidence 3478999999 899888887 889999999877763 333332 24588999999987666543
No 218
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=95.69 E-value=0.028 Score=39.65 Aligned_cols=59 Identities=15% Similarity=0.113 Sum_probs=41.0
Q ss_pred CeEEEEECCCCCCEEEE----EeC-------------CCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeC
Q 033677 17 PVNDVVFSPLSRGAFVT----GDN-------------EGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t----~s~-------------Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~ 78 (114)
.++++++.| +++++++ |.. .+.|..||..+++..... .....+.++|+|||+.|.++..
T Consensus 132 ~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~ 207 (305)
T 3dr2_A 132 SPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQT 207 (305)
T ss_dssp CCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEEC
T ss_pred CCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEec
Confidence 467899999 9988886 332 256777887666543322 3345688999999997776654
No 219
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=95.46 E-value=0.11 Score=37.18 Aligned_cols=56 Identities=9% Similarity=0.063 Sum_probs=43.1
Q ss_pred eEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEE
Q 033677 18 VNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVA 76 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~ 76 (114)
...+++.. +.++++...++.|.+||..+++.+.++. ....+..++++++|+++++.
T Consensus 46 ~~~i~~~~--~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~ 101 (328)
T 3dsm_A 46 AQSMVIRD--GIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQ 101 (328)
T ss_dssp EEEEEEET--TEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEE
T ss_pred ceEEEEEC--CEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEE
Confidence 56777754 4577777778999999999999888775 34668899999999655544
No 220
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=94.98 E-value=0.023 Score=41.69 Aligned_cols=50 Identities=8% Similarity=0.061 Sum_probs=33.9
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 28 RGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 28 ~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
+.++++++.||.|+.||..+++.+.++.. .++.+..+.++|.++++++.|
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~d 58 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPND 58 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTT
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCC
Confidence 46899999999999999999998877765 445444455666666655444
No 221
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.96 E-value=0.019 Score=46.22 Aligned_cols=60 Identities=10% Similarity=0.083 Sum_probs=40.1
Q ss_pred CeEEEEEC-CCCCCEEEEEe-CCC----cEEEEeCCCC-eeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 17 PVNDVVFS-PLSRGAFVTGD-NEG----YVAAWDAQSR-RRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~f~-p~~~~~~~t~s-~Dg----~I~iwD~~~~-~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
.+...+|+ | ++++|+-+. .+| .|+++|+.++ +.+.. ........++|+|||+.|+....+
T Consensus 175 ~~~~~~~S~P-DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~--~~~~~~~~~~WspDg~~l~y~~~d 241 (751)
T 2xe4_A 175 DVMEVKPAPP-EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD--KVSGTNGEIVWGPDHTSLFYVTKD 241 (751)
T ss_dssp EEEEEEECTT-TTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC--CEEEECSCCEECSSTTEEEEEEEC
T ss_pred EEeeeEecCC-CCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc--cccCceeeEEEecCCCEEEEEEEC
Confidence 56789999 9 998766433 233 4999999988 53211 001113468999999988877654
No 222
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=94.96 E-value=0.35 Score=34.38 Aligned_cols=61 Identities=8% Similarity=0.078 Sum_probs=41.7
Q ss_pred cCeEEEEECCCCCCEE-EEEeCCCcEEEEeCC--CC-e-----eeEEecCCCCCeEEEEECCCCCEEEEEe
Q 033677 16 VPVNDVVFSPLSRGAF-VTGDNEGYVAAWDAQ--SR-R-----RLFELPRFSNSVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~-~t~s~Dg~I~iwD~~--~~-~-----~~~~~~~~~~~v~~v~fspdg~~la~~s 77 (114)
...+.++|+| +++.| ++...++.|.+||+. ++ . .+..+......+..++++++|.++++..
T Consensus 179 ~~~~~i~~s~-dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~ 248 (326)
T 2ghs_A 179 SIPNSICFSP-DGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARW 248 (326)
T ss_dssp SSEEEEEECT-TSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEE
T ss_pred cccCCeEEcC-CCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEe
Confidence 3467899999 88755 555567899999986 55 2 1222222345577899999998776653
No 223
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=94.89 E-value=0.18 Score=35.60 Aligned_cols=57 Identities=18% Similarity=0.353 Sum_probs=43.0
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEE
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVA 76 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~ 76 (114)
...+++|.| +++++++-..++.|..||..... ...+ .....+..+++.++|+++++.
T Consensus 33 ~pegia~~~-~g~lyv~d~~~~~I~~~d~~g~~-~~~~-~~~~~p~gia~~~dG~l~vad 89 (306)
T 2p4o_A 33 FLENLASAP-DGTIFVTNHEVGEIVSITPDGNQ-QIHA-TVEGKVSGLAFTSNGDLVATG 89 (306)
T ss_dssp CEEEEEECT-TSCEEEEETTTTEEEEECTTCCE-EEEE-ECSSEEEEEEECTTSCEEEEE
T ss_pred CcceEEECC-CCCEEEEeCCCCeEEEECCCCce-EEEE-eCCCCceeEEEcCCCcEEEEe
Confidence 467899999 88888887788999999987643 2222 234568899999999976654
No 224
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=94.57 E-value=0.12 Score=38.94 Aligned_cols=54 Identities=15% Similarity=0.017 Sum_probs=42.0
Q ss_pred EEECCCCCCEEEEEeC-----CCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEe
Q 033677 21 VVFSPLSRGAFVTGDN-----EGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 21 v~f~p~~~~~~~t~s~-----Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s 77 (114)
....| +++.++.... ++.|.+.|..+++.+..+..-..+ . ++++|||+++.++.
T Consensus 38 ~~~~p-d~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan 96 (386)
T 3sjl_D 38 EAPAP-DARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHAS 96 (386)
T ss_dssp CCCCC-CTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEE
T ss_pred eccCC-CCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEc
Confidence 34568 7877777655 679999999999988888754455 4 99999999777665
No 225
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=94.53 E-value=0.1 Score=38.80 Aligned_cols=55 Identities=7% Similarity=-0.046 Sum_probs=38.7
Q ss_pred EEECCCCCCEEEEEeC---------CCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCE-EEEEe
Q 033677 21 VVFSPLSRGAFVTGDN---------EGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQL-LAVAS 77 (114)
Q Consensus 21 v~f~p~~~~~~~t~s~---------Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~-la~~s 77 (114)
++|+| ++..++.+.. ++.+.++|+.+++.+..+.. ......++|+|||+. +++..
T Consensus 269 v~~s~-dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v-g~~p~gi~~s~Dg~~l~va~~ 333 (368)
T 1mda_H 269 VAKLK-NTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN-GHDSDAIIAAQDGASDNYANS 333 (368)
T ss_dssp EEEET-TTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE-EEEECEEEECCSSSCEEEEEE
T ss_pred eEEcC-CCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC-CCCcceEEECCCCCEEEEEcc
Confidence 78999 8876665432 23556999999988777653 235789999999984 44443
No 226
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.29 E-value=0.2 Score=40.19 Aligned_cols=59 Identities=10% Similarity=0.053 Sum_probs=38.9
Q ss_pred EEEEECCCCCCEEEEEeCC-----CcEEEEeCCCCee--eEEec-CCCCCeEEEEECCCCCEEEEEeC
Q 033677 19 NDVVFSPLSRGAFVTGDNE-----GYVAAWDAQSRRR--LFELP-RFSNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 19 ~~v~f~p~~~~~~~t~s~D-----g~I~iwD~~~~~~--~~~~~-~~~~~v~~v~fspdg~~la~~s~ 78 (114)
..++|+| +++.|+....| ..|.++++.++.. ...+. ....-...+.|||||++|+..+.
T Consensus 224 ~~~~Wsp-Dg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~ 290 (751)
T 2xe4_A 224 GEIVWGP-DHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQ 290 (751)
T ss_dssp SCCEECS-STTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEE
T ss_pred eeEEEec-CCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEec
Confidence 3688999 88766555554 2578888877532 12222 22234568899999999987764
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=94.22 E-value=0.053 Score=43.29 Aligned_cols=56 Identities=21% Similarity=0.414 Sum_probs=40.8
Q ss_pred EECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCC-CCCeEEEEECCCCC-EEEEEeC
Q 033677 22 VFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRF-SNSVASLSYNHGGQ-LLAVASS 78 (114)
Q Consensus 22 ~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~-~~~v~~v~fspdg~-~la~~s~ 78 (114)
.+.. .+.+++.++.||.|+.||.++++.+.+++.. .....-+.|..+|+ |+++.+.
T Consensus 481 ~~~t-agglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~~G 538 (689)
T 1yiq_A 481 TLST-AGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVTFMAG 538 (689)
T ss_dssp EEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred cceE-CCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEEEEec
Confidence 3344 4678889999999999999999999888633 22234577788897 5565554
No 228
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=93.96 E-value=0.16 Score=39.21 Aligned_cols=83 Identities=13% Similarity=0.035 Sum_probs=51.0
Q ss_pred CeEEEEECCCCCCEEEEEeC-CCcEEEEeCCCC---eeeEEecCCC--------------CCeEEEEECCCCCEEEEEeC
Q 033677 17 PVNDVVFSPLSRGAFVTGDN-EGYVAAWDAQSR---RRLFELPRFS--------------NSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~-Dg~I~iwD~~~~---~~~~~~~~~~--------------~~v~~v~fspdg~~la~~s~ 78 (114)
.+.+|.++| ++++|+++.. .+.|.+||+.+. +.+..+.... .....++++|||++|.++.+
T Consensus 322 ~pa~I~lS~-DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaNs 400 (462)
T 2ece_A 322 LVTDIDISL-DDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTNS 400 (462)
T ss_dssp CCCCEEECT-TSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEECC
T ss_pred ceeEEEECC-CCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEcC
Confidence 367899999 8877655544 789999998633 3333333210 13578999999998887764
Q ss_pred C--Ccccc--cccCCCCcEEEEEcCcc
Q 033677 79 C--TYQEA--TVIEEPPQIFIIRIDDI 101 (114)
Q Consensus 79 d--~~~~~--~~~~~~~~i~i~~~~~~ 101 (114)
- .|+.- .+ .....+|.+.+...
T Consensus 401 l~~~wd~Qfyp~-~~~~~~~~~~vd~~ 426 (462)
T 2ece_A 401 LYSTWDNQFYPE-GLKGWMVKLNANPS 426 (462)
T ss_dssp CCHHHHHHHSTT-CCCCEEEEEEECTT
T ss_pred CcccccccccCC-CCceEEEEEEecCC
Confidence 2 45533 11 22344555544443
No 229
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=93.94 E-value=0.64 Score=36.68 Aligned_cols=58 Identities=7% Similarity=0.126 Sum_probs=38.0
Q ss_pred EEEEECCCCCCEEEEEeCCC-------------cEEEEeCCCCee----eEEecC-CCCCeEEEEECCCCCEEEEEeC
Q 033677 19 NDVVFSPLSRGAFVTGDNEG-------------YVAAWDAQSRRR----LFELPR-FSNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 19 ~~v~f~p~~~~~~~t~s~Dg-------------~I~iwD~~~~~~----~~~~~~-~~~~v~~v~fspdg~~la~~s~ 78 (114)
..++|+ +++.|+.++.+. .|++|++.+... +..... +...+..+.|||||++|++...
T Consensus 178 ~~~~Ws--Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~ 253 (693)
T 3iuj_A 178 SGISWL--GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAA 253 (693)
T ss_dssp CCCEEE--TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEE
T ss_pred ccEEEe--CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEc
Confidence 356677 456666666653 499999987542 222223 3445788999999998877654
No 230
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=93.85 E-value=0.64 Score=31.74 Aligned_cols=60 Identities=12% Similarity=0.062 Sum_probs=40.5
Q ss_pred eEEEEECCCCC-CEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeC
Q 033677 18 VNDVVFSPLSR-GAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 18 V~~v~f~p~~~-~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~ 78 (114)
+.+++++| ++ .++++-..++.|..+|...................++++|++..|..+..
T Consensus 38 ~~gi~~d~-~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~ 98 (267)
T 1npe_A 38 IIGLAFDC-VDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDS 98 (267)
T ss_dssp EEEEEEET-TTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEET
T ss_pred EEEEEEec-CCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEEC
Confidence 46899998 65 45566666789999999865433333333356789999997665555443
No 231
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=93.14 E-value=0.74 Score=34.51 Aligned_cols=61 Identities=13% Similarity=0.153 Sum_probs=41.4
Q ss_pred eEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEec-CCCCCeEEEEECCCCCEEEEEeC
Q 033677 18 VNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELP-RFSNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~-~~~~~v~~v~fspdg~~la~~s~ 78 (114)
..+++++|.++.++++-..++.|..+|..++....... ........++|+|+|++|.++..
T Consensus 228 p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVV 289 (430)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred ceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEEC
Confidence 46788999345666676677899999998765422222 22234679999999996655543
No 232
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=92.95 E-value=0.12 Score=41.18 Aligned_cols=58 Identities=21% Similarity=0.370 Sum_probs=41.0
Q ss_pred EEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecC-CCCCeEEEEECCCCC-EEEEEeC
Q 033677 20 DVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPR-FSNSVASLSYNHGGQ-LLAVASS 78 (114)
Q Consensus 20 ~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~-~~~~v~~v~fspdg~-~la~~s~ 78 (114)
+..+.. .+.+++.++.||.+++||.++++.+..+.. .....+-+.|.++|+ ++++.+.
T Consensus 481 ~g~~~~-~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G 540 (677)
T 1kb0_A 481 GGTLTT-AGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVG 540 (677)
T ss_dssp CCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred CcceEe-CCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEEecc
Confidence 334445 567888899999999999999999988863 233334567778886 4455444
No 233
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=92.90 E-value=0.67 Score=32.78 Aligned_cols=60 Identities=12% Similarity=0.124 Sum_probs=41.7
Q ss_pred ecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCC---------CCCeEEEEECCCCCEEEE
Q 033677 15 LVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRF---------SNSVASLSYNHGGQLLAV 75 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~---------~~~v~~v~fspdg~~la~ 75 (114)
...+.+|+++|..+++++.......+..+|.+.. .+..+... -.+.-.|+|.++|+++.+
T Consensus 172 ~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv 240 (255)
T 3qqz_A 172 LDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV 240 (255)
T ss_dssp SSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE
T ss_pred cCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE
Confidence 3456899999955566666767788889997754 44433322 136789999999986654
No 234
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=92.88 E-value=0.36 Score=36.67 Aligned_cols=49 Identities=16% Similarity=-0.040 Sum_probs=37.2
Q ss_pred CCCEEEEEeC-C----CcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEe
Q 033677 27 SRGAFVTGDN-E----GYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 27 ~~~~~~t~s~-D----g~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s 77 (114)
++..+++... + +.|.++|..+++.+..+..-..+ .++++|||+.+.++.
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan 136 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQAS 136 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEE
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEe
Confidence 5555544443 3 79999999999999888755555 899999999777665
No 235
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=92.87 E-value=0.56 Score=32.94 Aligned_cols=60 Identities=8% Similarity=0.097 Sum_probs=42.6
Q ss_pred eEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeE--EecCCCCCeEEEEEC---CCCCEEEEEeCC
Q 033677 18 VNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLF--ELPRFSNSVASLSYN---HGGQLLAVASSC 79 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~--~~~~~~~~v~~v~fs---pdg~~la~~s~d 79 (114)
...+++.+ +++++++....+.|.++|.. ++... .+......+++++|. |++..|.+++..
T Consensus 214 P~gi~vd~-dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 214 IDDFAFDV-EGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp CSSEEEBT-TCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred CCCeEECC-CCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 45688999 88887777778899999976 44322 233223568999998 898777666654
No 236
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=92.57 E-value=0.2 Score=39.83 Aligned_cols=62 Identities=11% Similarity=0.058 Sum_probs=45.3
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCC----------CeeeEEecCCCCCe-----EEEEECCCCCEEEEEeCC
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQS----------RRRLFELPRFSNSV-----ASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~----------~~~~~~~~~~~~~v-----~~v~fspdg~~la~~s~d 79 (114)
....++|+| ++..+++.-.|+.|..||+.+ .+.+.++.-+..+- ..++++|||++|.++..-
T Consensus 332 gP~h~aF~~-dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~ 408 (595)
T 1fwx_A 332 GPLHTAFDG-RGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKF 408 (595)
T ss_dssp CEEEEEECT-TSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESC
T ss_pred CcceEEECC-CCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCC
Confidence 467899999 886667777899999999987 45566665554432 123568999999887654
No 237
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=92.38 E-value=0.38 Score=37.18 Aligned_cols=58 Identities=14% Similarity=0.200 Sum_probs=43.2
Q ss_pred EEEECCCCCCEEEEEe-------------------CCCcEEEEeCCCCeeeEEecCC-C-CCeEEEEE--CCCCCEEEEE
Q 033677 20 DVVFSPLSRGAFVTGD-------------------NEGYVAAWDAQSRRRLFELPRF-S-NSVASLSY--NHGGQLLAVA 76 (114)
Q Consensus 20 ~v~f~p~~~~~~~t~s-------------------~Dg~I~iwD~~~~~~~~~~~~~-~-~~v~~v~f--spdg~~la~~ 76 (114)
.+-|+| +++.+++.. .+..|.+||+.+++.+.++... . .....+.| +|+|+++.++
T Consensus 192 d~~~~p-~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~ 270 (462)
T 2ece_A 192 DFWWNL-PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFIN 270 (462)
T ss_dssp CEEEET-TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEE
T ss_pred eEEECC-CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEE
Confidence 577899 888888874 3679999999998877777642 1 23445656 9999988777
Q ss_pred eC
Q 033677 77 SS 78 (114)
Q Consensus 77 s~ 78 (114)
+.
T Consensus 271 ~e 272 (462)
T 2ece_A 271 MV 272 (462)
T ss_dssp EE
T ss_pred Ee
Confidence 65
No 238
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=91.97 E-value=1.4 Score=33.92 Aligned_cols=62 Identities=16% Similarity=0.313 Sum_probs=43.9
Q ss_pred ecCeEEEEECCCCC---CEEEEEeCCCcEEEEeCCCCe-eeEEec---------CCCCCeEEEEECCCCCEEEEEe
Q 033677 15 LVPVNDVVFSPLSR---GAFVTGDNEGYVAAWDAQSRR-RLFELP---------RFSNSVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 15 ~~~V~~v~f~p~~~---~~~~t~s~Dg~I~iwD~~~~~-~~~~~~---------~~~~~v~~v~fspdg~~la~~s 77 (114)
..+|..+-||| -+ ..|++-..|+.|++||+.... ....+. .....|.+++|.++|-.|.+.+
T Consensus 124 ~s~I~qVlWHP-l~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~ 198 (452)
T 3pbp_A 124 KSSIKKVLFHP-KSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLN 198 (452)
T ss_dssp CCCEEEEEECT-TBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEE
T ss_pred CCceeEEEecc-ccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEe
Confidence 46799999999 64 489999999999999998521 001121 1226788999999886555433
No 239
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=91.72 E-value=2.3 Score=30.23 Aligned_cols=57 Identities=11% Similarity=-0.031 Sum_probs=38.1
Q ss_pred eEEEEECCCCCCEEEEEeC--CCcEEEEeCCCCeeeEEecCCCC-CeEEEEECCCCCEEEEEe
Q 033677 18 VNDVVFSPLSRGAFVTGDN--EGYVAAWDAQSRRRLFELPRFSN-SVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~--Dg~I~iwD~~~~~~~~~~~~~~~-~v~~v~fspdg~~la~~s 77 (114)
..+|.|+| ++.++++.+. ++.|.+.|..+++.+..+..... -...+++. |..|.++.
T Consensus 23 ~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t 82 (266)
T 2iwa_A 23 TQGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVV 82 (266)
T ss_dssp EEEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEE
T ss_pred cccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEE
Confidence 46899999 7766666554 57999999999998887652222 22345554 55555554
No 240
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=91.40 E-value=2.7 Score=29.59 Aligned_cols=59 Identities=12% Similarity=0.283 Sum_probs=42.9
Q ss_pred cCeEEEEECCCCCC-EEEEEeCCCcEEEEeCCCCeeeEEecC-CCCCeEEEEECCCCCEEEEEe
Q 033677 16 VPVNDVVFSPLSRG-AFVTGDNEGYVAAWDAQSRRRLFELPR-FSNSVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 16 ~~V~~v~f~p~~~~-~~~t~s~Dg~I~iwD~~~~~~~~~~~~-~~~~v~~v~fspdg~~la~~s 77 (114)
..+.+|+++| +++ ++++...++.|...|.. ++.+..++. -....-.|++.++|.++ ++.
T Consensus 27 ~~lSGla~~~-~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~-vs~ 87 (255)
T 3qqz_A 27 NNISSLTWSA-QSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFV-ISD 87 (255)
T ss_dssp SCEEEEEEET-TTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEE-EEE
T ss_pred cCcceeEEeC-CCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEE-EEE
Confidence 3588999999 665 55567778899999998 777777642 22457789999888644 444
No 241
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=91.36 E-value=1.7 Score=30.98 Aligned_cols=63 Identities=8% Similarity=0.094 Sum_probs=45.7
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCC------------CCCeEEEEECCCCCEEEEEeCCCcc
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRF------------SNSVASLSYNHGGQLLAVASSCTYQ 82 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~------------~~~v~~v~fspdg~~la~~s~d~~~ 82 (114)
.+|.+.|. ++.+++....+..|.+-|.++++.+..+... ....+.|+|+|+++.|.+.+ -.|.
T Consensus 173 ~lNELe~~--~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG-K~Wp 247 (262)
T 3nol_A 173 ELNELEWV--DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG-KLWP 247 (262)
T ss_dssp CEEEEEEE--TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE-TTCS
T ss_pred ccceeEEE--CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC-CCCC
Confidence 35567765 4566666667889999999999988777531 23568999999988777665 4453
No 242
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=91.03 E-value=2.6 Score=28.62 Aligned_cols=61 Identities=16% Similarity=0.109 Sum_probs=38.6
Q ss_pred cCeEEEEECCCCCCEE-EEEeC--CCcEEEEeCCCCeeeEEec-CCCCCeEEEEECCCCCEEEEEeC
Q 033677 16 VPVNDVVFSPLSRGAF-VTGDN--EGYVAAWDAQSRRRLFELP-RFSNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~-~t~s~--Dg~I~iwD~~~~~~~~~~~-~~~~~v~~v~fspdg~~la~~s~ 78 (114)
...+.++++| ++..| ++-.. .+.|..++++... ...+. ........++++|++..|.++..
T Consensus 122 ~~P~~i~vd~-~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~ 186 (267)
T 1npe_A 122 VNPRGIVTDP-VRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDA 186 (267)
T ss_dssp SSEEEEEEET-TTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEET
T ss_pred CCccEEEEee-CCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEEC
Confidence 3468999999 66554 44433 4688888876432 22222 22345789999998776655554
No 243
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=90.15 E-value=1.8 Score=30.33 Aligned_cols=59 Identities=12% Similarity=0.068 Sum_probs=38.9
Q ss_pred CeEEEEECCCCCCEE-EEEeCCCcEEEEeCCCCe--eeEEecCCCCCeEEEEECCCCCEEEEEe
Q 033677 17 PVNDVVFSPLSRGAF-VTGDNEGYVAAWDAQSRR--RLFELPRFSNSVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~-~t~s~Dg~I~iwD~~~~~--~~~~~~~~~~~v~~v~fspdg~~la~~s 77 (114)
..+.|+++| +++.| ++-..++.|.+||+.... ....+..... ...+++.++|.++++..
T Consensus 186 ~p~gia~~~-dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 186 VPGGAEVSA-DSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSS 247 (322)
T ss_dssp CCCEEEECT-TSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEE
T ss_pred cCcceEECC-CCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEec
Confidence 456899999 88754 454667899999987521 1112211233 78899999998766543
No 244
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=89.81 E-value=1.5 Score=31.43 Aligned_cols=35 Identities=14% Similarity=0.242 Sum_probs=28.9
Q ss_pred eEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEe
Q 033677 18 VNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFEL 54 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~ 54 (114)
..+|.|.. +.++.+.+.+|.|+++|+++++.+..+
T Consensus 57 tqGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~ 91 (268)
T 3nok_A 57 TQGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWME 91 (268)
T ss_dssp EEEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEE
T ss_pred cceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEE
Confidence 35778875 468888999999999999999888776
No 245
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=89.74 E-value=3 Score=31.22 Aligned_cols=60 Identities=10% Similarity=0.087 Sum_probs=41.5
Q ss_pred ecCeEEEEECCCC--CCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEE
Q 033677 15 LVPVNDVVFSPLS--RGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVA 76 (114)
Q Consensus 15 ~~~V~~v~f~p~~--~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~ 76 (114)
......|++.| + ...|+.+...+.|+.+|..++... .+......+..++|+++|.++++-
T Consensus 138 ~~~P~gvavd~-~s~~g~Lyv~D~~~~I~~id~~~g~v~-~~~~~~~~P~giavd~dG~lyVad 199 (433)
T 4hw6_A 138 FDNIWRMMFDP-NSNYDDLYWVGQRDAFRHVDFVNQYVD-IKTTNIGQCADVNFTLNGDMVVVD 199 (433)
T ss_dssp CSCCCEEEECT-TTTTCEEEEECBTSCEEEEETTTTEEE-EECCCCSCEEEEEECTTCCEEEEE
T ss_pred cCCCceEEEcc-ccCCCEEEEEeCCCCEEEEECCCCEEE-EeecCCCCccEEEECCCCCEEEEc
Confidence 34567999998 5 334444433389999999877644 344445568899999999955543
No 246
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=89.45 E-value=1.4 Score=34.25 Aligned_cols=61 Identities=11% Similarity=0.101 Sum_probs=41.1
Q ss_pred eEEEEECCCCCCEEEEEeCCCcEEEEeCC-------CCee-----------eEEe-c-CCCCCeEEEEECCCCCEEEEEe
Q 033677 18 VNDVVFSPLSRGAFVTGDNEGYVAAWDAQ-------SRRR-----------LFEL-P-RFSNSVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~-------~~~~-----------~~~~-~-~~~~~v~~v~fspdg~~la~~s 77 (114)
.+.++++|.++.++++-..++.|..+|+. ++.. ...+ . ........|+|+|+|.+|.++.
T Consensus 249 p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD 328 (496)
T 3kya_A 249 CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGV 328 (496)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEe
Confidence 46788999445677778788899999987 5543 1121 1 2223457999999999665554
Q ss_pred C
Q 033677 78 S 78 (114)
Q Consensus 78 ~ 78 (114)
.
T Consensus 329 ~ 329 (496)
T 3kya_A 329 I 329 (496)
T ss_dssp T
T ss_pred C
Confidence 4
No 247
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=89.43 E-value=1.8 Score=30.69 Aligned_cols=60 Identities=8% Similarity=0.071 Sum_probs=44.8
Q ss_pred eEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCC-------------CCCeEEEEECCCCCEEEEEeCC
Q 033677 18 VNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRF-------------SNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~-------------~~~v~~v~fspdg~~la~~s~d 79 (114)
++.+.|.. +.+++....++.|.+-|..+++.+..+... ....+.|+|+|+++.|.++...
T Consensus 154 ~nele~~d--g~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~ 226 (266)
T 2iwa_A 154 LNELEYIN--GEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL 226 (266)
T ss_dssp EEEEEEET--TEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT
T ss_pred ceeEEEEC--CEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCC
Confidence 66777773 556666667889999999999988777531 1356899999999877766643
No 248
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=89.01 E-value=0.82 Score=35.77 Aligned_cols=51 Identities=25% Similarity=0.503 Sum_probs=37.2
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeeeEEecCCCC-CeEEEEECCCCC-EEEEEeC
Q 033677 28 RGAFVTGDNEGYVAAWDAQSRRRLFELPRFSN-SVASLSYNHGGQ-LLAVASS 78 (114)
Q Consensus 28 ~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~-~v~~v~fspdg~-~la~~s~ 78 (114)
+.+++.++.||.++.||.++++.+.+++.... ...-+.|..+|+ |+++.+.
T Consensus 497 gglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~~G 549 (582)
T 1flg_A 497 GNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVTVG 549 (582)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred CCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEEEcc
Confidence 46777899999999999999999988864322 122367778886 5666555
No 249
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=88.59 E-value=4.4 Score=32.26 Aligned_cols=64 Identities=11% Similarity=0.108 Sum_probs=43.5
Q ss_pred ecCeEEEEECCCCCCEEEEEeC------------CCcEEEEeCCCCeeeEEecC-CCCCeEEEEECCCCCEEEEEeCC
Q 033677 15 LVPVNDVVFSPLSRGAFVTGDN------------EGYVAAWDAQSRRRLFELPR-FSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s~------------Dg~I~iwD~~~~~~~~~~~~-~~~~v~~v~fspdg~~la~~s~d 79 (114)
....+.|.|.+ ++.++++-.. ...+..++..+++....+.. ....++.++|+||++.|.++...
T Consensus 475 fnsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQH 551 (592)
T 4a9v_A 475 FNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp CCCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEES
T ss_pred cCCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEeC
Confidence 55678999999 8988773211 11566667766764443332 24578999999999988776643
No 250
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=88.40 E-value=1.6 Score=30.63 Aligned_cols=56 Identities=21% Similarity=0.380 Sum_probs=39.3
Q ss_pred eEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEec--C------------------CCCCeEEEEECC-CCCEEEE
Q 033677 18 VNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELP--R------------------FSNSVASLSYNH-GGQLLAV 75 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~--~------------------~~~~v~~v~fsp-dg~~la~ 75 (114)
..++++.| ++++++++..++.|..||..++... .+. . ....+..+++.+ +|+++++
T Consensus 21 p~~i~~d~-~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 21 PNSFTFDS-TNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp CCCEECCT-TCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred ceEEEEcC-CCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence 56789999 8887788888999999998765432 221 0 013578999997 7765554
No 251
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=88.27 E-value=2.6 Score=31.15 Aligned_cols=61 Identities=8% Similarity=0.047 Sum_probs=43.7
Q ss_pred CeEEEEECCCCCCEEEEEeCC-CcEEEEeCCCCeeeEEec-C-----CCCCeEEEEECCCCCEEEEEeCC
Q 033677 17 PVNDVVFSPLSRGAFVTGDNE-GYVAAWDAQSRRRLFELP-R-----FSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~D-g~I~iwD~~~~~~~~~~~-~-----~~~~v~~v~fspdg~~la~~s~d 79 (114)
..++++..+ +++..++++.. +.|...|..... +..+. . ...-.+.|++.|+|.+|++....
T Consensus 138 ~~nDvavD~-~GnaYVt~s~~~~~I~rV~pdG~~-~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~ 205 (334)
T 2p9w_A 138 GVVQSAQDR-DGNSYVAFALGMPAIARVSADGKT-VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGP 205 (334)
T ss_dssp EEEEEEECT-TSCEEEEEEESSCEEEEECTTSCC-EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSS
T ss_pred CCceeEECC-CCCEEEeCCCCCCeEEEEeCCCCE-EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCC
Confidence 488999999 99999998888 888877776442 22221 1 11236799999999887776543
No 252
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=88.26 E-value=3.4 Score=29.78 Aligned_cols=62 Identities=8% Similarity=0.017 Sum_probs=39.7
Q ss_pred cCeEEEEECCCCCCEEEEEeCC-CcEEEEeCCCCeeeEEe-cCCCCCeEEEEECCCCCEEEEEeC
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNE-GYVAAWDAQSRRRLFEL-PRFSNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~D-g~I~iwD~~~~~~~~~~-~~~~~~v~~v~fspdg~~la~~s~ 78 (114)
...++|+++|..+.++++-..+ +.|...+++... ...+ .......+.++|+|++..|..+..
T Consensus 159 ~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~~~~PnGla~d~~~~~lY~aD~ 222 (349)
T 3v64_C 159 EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIADTHLFWPNGLTIDYAGRRMYWVDA 222 (349)
T ss_dssp SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEESCCSSCSCEEEEEEETTTTEEEEEET
T ss_pred CCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC-cEEEEECCCCCcceEEEeCCCCEEEEEEC
Confidence 3468999999334556665555 788888887543 2223 223345789999987766655543
No 253
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=88.24 E-value=0.86 Score=36.23 Aligned_cols=41 Identities=12% Similarity=0.299 Sum_probs=29.9
Q ss_pred CcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 38 GYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 38 g~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
|.|..||+.+++.+.+++ +..++....+..+|.++++++.|
T Consensus 457 g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~d 497 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTAD 497 (677)
T ss_dssp EEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTT
T ss_pred cEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCC
Confidence 789999999999887765 33344455566677778777766
No 254
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=87.75 E-value=3.8 Score=30.01 Aligned_cols=62 Identities=10% Similarity=0.027 Sum_probs=39.9
Q ss_pred cCeEEEEECCCCC-CEEEEEeCC-CcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeC
Q 033677 16 VPVNDVVFSPLSR-GAFVTGDNE-GYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 16 ~~V~~v~f~p~~~-~~~~t~s~D-g~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~ 78 (114)
...++|++.| .+ .++++-..+ +.|...++................+.|+|+|++..|..+..
T Consensus 202 ~~P~giavdp-~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~ 265 (386)
T 3v65_B 202 EKPRAIALHP-MEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDA 265 (386)
T ss_dssp SCEEEEEEET-TTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEET
T ss_pred CCCcEEEEEc-CCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEEC
Confidence 4468999998 55 455665555 78888888754332222333345789999987766655543
No 255
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=87.29 E-value=2.3 Score=31.87 Aligned_cols=61 Identities=10% Similarity=0.115 Sum_probs=39.5
Q ss_pred eEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEec--CCCCCeEEEEECCCCCEEEEEeC
Q 033677 18 VNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELP--RFSNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~--~~~~~v~~v~fspdg~~la~~s~ 78 (114)
.+.++++|.++.++++-..++.|..+|..++.....+. ........++|+|+|+.|.++..
T Consensus 230 P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~ 292 (433)
T 4hw6_A 230 AKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYN 292 (433)
T ss_dssp BCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEET
T ss_pred CCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeC
Confidence 46788898334666666667899999998776422222 11222347999999986655544
No 256
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=86.55 E-value=4.4 Score=32.27 Aligned_cols=60 Identities=10% Similarity=0.047 Sum_probs=45.8
Q ss_pred eEEEEE-C-CCCCCEEEEEe------------------CCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEe
Q 033677 18 VNDVVF-S-PLSRGAFVTGD------------------NEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 18 V~~v~f-~-p~~~~~~~t~s------------------~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s 77 (114)
+..+++ . | +++++++++ .++.+.+.|..+.+.+.++.--. ....++++|||+++.+.+
T Consensus 136 phg~~~~~~p-~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~ 213 (595)
T 1fwx_A 136 IHGLRPQKWP-RSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTS 213 (595)
T ss_dssp EEEEEECCSS-BCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEE
T ss_pred CcceeeeecC-CCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEe
Confidence 567887 4 8 888877774 24689999999998887776322 456788999999998888
Q ss_pred CC
Q 033677 78 SC 79 (114)
Q Consensus 78 ~d 79 (114)
.+
T Consensus 214 ~~ 215 (595)
T 1fwx_A 214 YN 215 (595)
T ss_dssp SC
T ss_pred cC
Confidence 55
No 257
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=86.51 E-value=6.7 Score=27.65 Aligned_cols=60 Identities=12% Similarity=0.087 Sum_probs=37.9
Q ss_pred CeEEEEECCCCCC-EEEEEeCC-CcEEEEeCCCCeeeEEe-cCCCCCeEEEEECCCCCEEEEEeC
Q 033677 17 PVNDVVFSPLSRG-AFVTGDNE-GYVAAWDAQSRRRLFEL-PRFSNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 17 ~V~~v~f~p~~~~-~~~t~s~D-g~I~iwD~~~~~~~~~~-~~~~~~v~~v~fspdg~~la~~s~ 78 (114)
...+|++.| .+. ++++-... +.|...++.... ...+ .......+.++++|++..|..+..
T Consensus 121 ~P~~iavdp-~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~~~~~~~~P~gla~d~~~~~lY~~D~ 183 (316)
T 1ijq_A 121 KPRAIVVDP-VHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWVDS 183 (316)
T ss_dssp CEEEEEEET-TTTEEEEEECSSSCEEEEEETTSCC-EEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CcceEEeCC-CCCEEEEEccCCCCeEEEEcCCCCC-eEEEEECCCCCceEEEEeccCCEEEEEEC
Confidence 467899998 554 55554443 788888876433 3323 223356789999988766655543
No 258
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=86.39 E-value=3.2 Score=30.95 Aligned_cols=59 Identities=8% Similarity=0.058 Sum_probs=39.8
Q ss_pred CeEEEEECCCC-CCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEe
Q 033677 17 PVNDVVFSPLS-RGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 17 ~V~~v~f~p~~-~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s 77 (114)
....|+++| . ...|+.+...+.|..+|+..+.... +.........++|+++|+.|.++.
T Consensus 138 ~P~~lavdp-~~~g~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~~G~~lyvad 197 (430)
T 3tc9_A 138 GAVWLSFDP-KNHNHLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTHEADSMIITN 197 (430)
T ss_dssp CCCEEEEET-TEEEEEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECTTSSEEEEEE
T ss_pred CCCEEEECC-CCCCeEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeCCCCEEEEEe
Confidence 457899997 4 2334444434889999998766433 334455688999999999555444
No 259
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=86.13 E-value=1.5 Score=34.54 Aligned_cols=51 Identities=22% Similarity=0.332 Sum_probs=36.6
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeeeEEecCCC-CCeEEEEECCCCC-EEEEEeC
Q 033677 28 RGAFVTGDNEGYVAAWDAQSRRRLFELPRFS-NSVASLSYNHGGQ-LLAVASS 78 (114)
Q Consensus 28 ~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~-~~v~~v~fspdg~-~la~~s~ 78 (114)
+.+++.++.||.|+.||.++++.+.+++... ....-+.|..+|+ |+++.+.
T Consensus 484 gg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~~~~G 536 (599)
T 1w6s_A 484 GDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAIYYG 536 (599)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred CCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEEEEcc
Confidence 4677779999999999999999998876322 2223356667886 5666555
No 260
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=86.13 E-value=1.6 Score=34.04 Aligned_cols=47 Identities=19% Similarity=0.335 Sum_probs=33.3
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeeeEEecCCC-CCeEEEEECCCCCEEE
Q 033677 28 RGAFVTGDNEGYVAAWDAQSRRRLFELPRFS-NSVASLSYNHGGQLLA 74 (114)
Q Consensus 28 ~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~-~~v~~v~fspdg~~la 74 (114)
+.+++.++.||.|+.||.++++.+.+++... ..-.-+.|..+|++++
T Consensus 475 gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv 522 (571)
T 2ad6_A 475 GGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYI 522 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEE
Confidence 4677778999999999999999988776322 1122344667887544
No 261
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=85.72 E-value=3.2 Score=30.65 Aligned_cols=63 Identities=16% Similarity=0.131 Sum_probs=43.1
Q ss_pred ecCeEEEEECCCCCCEEEE-EeCCCcEEEEeCCC-Cee--eEEecCCCCCeEEEEECC-CCCEEEEEeCC
Q 033677 15 LVPVNDVVFSPLSRGAFVT-GDNEGYVAAWDAQS-RRR--LFELPRFSNSVASLSYNH-GGQLLAVASSC 79 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t-~s~Dg~I~iwD~~~-~~~--~~~~~~~~~~v~~v~fsp-dg~~la~~s~d 79 (114)
..-.|+|+|+| +++.|+. -+..+.|..||+.. ++. ...+ ......-.+++.+ +|.+.+++.-+
T Consensus 220 l~~pNGia~sp-Dg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 220 FDFANGINISP-DGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp ESSEEEEEECT-TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred CcccCcceECC-CCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence 45678999999 8866554 45578999999863 321 1223 3355677899999 59987766434
No 262
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=85.52 E-value=1.3 Score=31.29 Aligned_cols=55 Identities=15% Similarity=0.111 Sum_probs=37.4
Q ss_pred EEEEECCCCCCEEEEEeCCCcEEEEeCCCCeee------EEe-cCCCCCeEEEEECCCCCEEEEE
Q 033677 19 NDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRL------FEL-PRFSNSVASLSYNHGGQLLAVA 76 (114)
Q Consensus 19 ~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~------~~~-~~~~~~v~~v~fspdg~~la~~ 76 (114)
.++.|.| ++.+.++ .||.|..++--+.... ..+ ..-=..+..|.|.|+|.+.|+.
T Consensus 91 ~a~~fD~-~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 91 QFLFFDP-NGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp SEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred eEEEECC-CCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 6889999 8887777 5699988875221111 011 1111467899999999999988
No 263
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=85.36 E-value=2.1 Score=31.67 Aligned_cols=61 Identities=16% Similarity=0.207 Sum_probs=39.2
Q ss_pred ecCeEEEEECCCCCCEEEEEe-----------------CCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEe
Q 033677 15 LVPVNDVVFSPLSRGAFVTGD-----------------NEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s-----------------~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s 77 (114)
....|++.+.+ ++.++++.. ..|.|..+|.. + +..+...-...+.++|||||+.|.++.
T Consensus 164 ~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~-~~~~~~~l~~pNGia~spDg~~lYvad 239 (355)
T 3sre_A 164 LPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--D-VRVVAEGFDFANGINISPDGKYVYIAE 239 (355)
T ss_dssp CSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--C-CEEEEEEESSEEEEEECTTSSEEEEEE
T ss_pred CCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--e-EEEeecCCcccCcceECCCCCEEEEEe
Confidence 45678999999 887666654 12456666653 2 222222234468999999998887766
Q ss_pred CC
Q 033677 78 SC 79 (114)
Q Consensus 78 ~d 79 (114)
+.
T Consensus 240 t~ 241 (355)
T 3sre_A 240 LL 241 (355)
T ss_dssp GG
T ss_pred CC
Confidence 53
No 264
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=85.35 E-value=7 Score=27.39 Aligned_cols=63 Identities=10% Similarity=0.098 Sum_probs=44.1
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecC-------------CCCCeEEEEECCCCCEEEEEeCCCcc
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPR-------------FSNSVASLSYNHGGQLLAVASSCTYQ 82 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~-------------~~~~v~~v~fspdg~~la~~s~d~~~ 82 (114)
.+|.+.+. ++.+++....+..|.+-|.++++.+..+.. .....+.|+|+|+++.|.+.+ -.|.
T Consensus 151 ~lNeLe~~--~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG-K~wp 226 (243)
T 3mbr_X 151 NLNELEWV--NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG-KRWP 226 (243)
T ss_dssp CEEEEEEE--TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE-TTCS
T ss_pred cceeeEEe--CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC-CCCC
Confidence 45666655 355666666678999999999998877641 123568999999887776665 3453
No 265
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=85.27 E-value=1.4 Score=35.03 Aligned_cols=42 Identities=21% Similarity=0.387 Sum_probs=30.2
Q ss_pred CCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 37 EGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 37 Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
+|.|..||+.+++.+.+++.. .++....+...|.++++++.|
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagglvf~gt~d 495 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYV-TIFNGGTLSTAGNLVFEGSAD 495 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTT
T ss_pred ceeEEEEECCCCCeEeEccCC-CCccCccceECCCEEEEECCC
Confidence 378999999999988776533 333334556667788888877
No 266
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=85.03 E-value=1.4 Score=34.91 Aligned_cols=52 Identities=17% Similarity=0.372 Sum_probs=36.2
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCC-CeEEEEECCCCC-EEEEEeC
Q 033677 27 SRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSN-SVASLSYNHGGQ-LLAVASS 78 (114)
Q Consensus 27 ~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~-~v~~v~fspdg~-~la~~s~ 78 (114)
.+.+++.++.||.++.||.++++.+..++.... .-.-+.+..+|+ ++++++.
T Consensus 468 ~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva~~~G 521 (668)
T 1kv9_A 468 AGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIMAG 521 (668)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred CCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEEEEEEEec
Confidence 356888899999999999999998887764321 112344556776 5666554
No 267
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=84.85 E-value=1.9 Score=35.79 Aligned_cols=38 Identities=8% Similarity=0.086 Sum_probs=32.2
Q ss_pred cCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEe
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFEL 54 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~ 54 (114)
..+.+++..+ +...+++-+.|+++++|++.+++++...
T Consensus 236 ~~~~~~~~~~-~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEET-TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeecC-CCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 3467777777 7789999999999999999999888765
No 268
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=84.44 E-value=7.9 Score=27.51 Aligned_cols=56 Identities=7% Similarity=0.005 Sum_probs=35.6
Q ss_pred EEEEECCCCCCEEEEEeCCC--cEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEe
Q 033677 19 NDVVFSPLSRGAFVTGDNEG--YVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 19 ~~v~f~p~~~~~~~t~s~Dg--~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s 77 (114)
.+|.|+. +.++.+.+.+| .|+++|+++++.+..+... .........+++..|....
T Consensus 46 qGL~~~~--~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~lt 103 (262)
T 3nol_A 46 EGFFYRN--GYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLT 103 (262)
T ss_dssp EEEEEET--TEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEE
T ss_pred ceEEEEC--CEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEE
Confidence 5677774 46777877776 9999999999988877533 2332222223344554443
No 269
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=84.23 E-value=7.9 Score=27.66 Aligned_cols=63 Identities=6% Similarity=0.031 Sum_probs=44.3
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCC-------------CCCeEEEEECCCCCEEEEEeCCCcc
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRF-------------SNSVASLSYNHGGQLLAVASSCTYQ 82 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~-------------~~~v~~v~fspdg~~la~~s~d~~~ 82 (114)
.+|.+.|. ++.+++....+..|.+-|.++++.+..+... ....+.|+|+|+++.|.+.. -.|.
T Consensus 182 ~lNeLe~~--dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG-K~Wp 257 (268)
T 3nok_A 182 LINELECA--NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG-KLWP 257 (268)
T ss_dssp CEEEEEEE--TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE-TTCS
T ss_pred cccccEEe--CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC-CCCC
Confidence 45677776 4566666667889999999999988776421 24678999999876555443 4453
No 270
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=83.95 E-value=0.86 Score=32.18 Aligned_cols=55 Identities=13% Similarity=0.064 Sum_probs=35.7
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCC--------eEEEEECCCCCEEEE
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNS--------VASLSYNHGGQLLAV 75 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~--------v~~v~fspdg~~la~ 75 (114)
.+..++|+| ++.+.+. .+|.+...+..+..... +...... ..++.|.|+|.+.|+
T Consensus 42 ~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~-W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav 104 (236)
T 1tl2_A 42 NFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDN-WMGRAKKIGNGGWNQFQFLFFDPNGYLYAV 104 (236)
T ss_dssp TCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCC-HHHHCEEEECSCGGGCSEEEECTTSCEEEE
T ss_pred cceeEEECC-CccEEEE--eCCeEEEECCCCCCccc-ccccccEecccccccceEEEECCCCCEEEe
Confidence 577999999 9887777 67777766654421110 1111111 368999999998887
No 271
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=83.53 E-value=11 Score=27.64 Aligned_cols=53 Identities=17% Similarity=0.224 Sum_probs=37.5
Q ss_pred cCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCee--eEEec----CCCCCeEEEEECCC
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRR--LFELP----RFSNSVASLSYNHG 69 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~--~~~~~----~~~~~v~~v~fspd 69 (114)
.....|+|.| ++.+|++--..|.|.+++..+++. +..+. ........|+|+|+
T Consensus 32 ~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pd 90 (347)
T 3das_A 32 NSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPD 90 (347)
T ss_dssp SSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTT
T ss_pred CCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccc
Confidence 3467899999 998888876689999998765543 21121 12446789999995
No 272
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=82.53 E-value=12 Score=27.41 Aligned_cols=62 Identities=8% Similarity=-0.085 Sum_probs=39.5
Q ss_pred cCeEEEEECCCCC-CEEEEEeC-CCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeC
Q 033677 16 VPVNDVVFSPLSR-GAFVTGDN-EGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 16 ~~V~~v~f~p~~~-~~~~t~s~-Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~ 78 (114)
....+|+++| .+ .++++-.. .+.|...++............-...+.|+++|++..|..+..
T Consensus 202 ~~P~~iavdp-~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~ 265 (400)
T 3p5b_L 202 SKPRAIVVDP-VHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDS 265 (400)
T ss_dssp CCEEEEEEET-TTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CCcceEEEec-ccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEEC
Confidence 3467899999 55 45555433 478888888754333333333356789999987776665543
No 273
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=82.36 E-value=9.5 Score=26.86 Aligned_cols=60 Identities=8% Similarity=0.043 Sum_probs=38.7
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEE
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVA 76 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~ 76 (114)
...+|++.+..++++++-..++.|.+.|.........+.........+++.|.+..|..+
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~ 137 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWT 137 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEE
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEE
Confidence 457889987234556666678899999987544332333334567899999865544433
No 274
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=82.35 E-value=3.5 Score=29.83 Aligned_cols=43 Identities=16% Similarity=0.271 Sum_probs=32.1
Q ss_pred CEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeE-EEEECCCCCE
Q 033677 29 GAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVA-SLSYNHGGQL 72 (114)
Q Consensus 29 ~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~-~v~fspdg~~ 72 (114)
..+++++.||.|..||.++++.+..+. ...++. ...++++|.+
T Consensus 174 ~~v~~~~~dg~v~a~d~~tG~~~W~~~-~~~pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 174 MSHFVSNGDGLVVTVDSESGDVLWIQN-YASPVVAFYVWQREGLR 217 (369)
T ss_dssp CCEEEEETSCEEEEECTTTCCEEEEEE-CSSCEEEEEECTTSSCE
T ss_pred ceEEEECCCCEEEEEECCCCcEEEEec-CCCceEEEEEecCCceE
Confidence 467778899999999999998877665 344554 4566778864
No 275
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=82.22 E-value=5.7 Score=28.69 Aligned_cols=59 Identities=12% Similarity=0.142 Sum_probs=34.9
Q ss_pred cCeEEEEECCCC---CCEE-EEEeCC-----CcEEEEeCCCC-----eeeE-EecC---CCCCeEEEEECCCCCEEEE
Q 033677 16 VPVNDVVFSPLS---RGAF-VTGDNE-----GYVAAWDAQSR-----RRLF-ELPR---FSNSVASLSYNHGGQLLAV 75 (114)
Q Consensus 16 ~~V~~v~f~p~~---~~~~-~t~s~D-----g~I~iwD~~~~-----~~~~-~~~~---~~~~v~~v~fspdg~~la~ 75 (114)
...+.|+|+| + +..| ++-..+ +.|..|+.... +.+. .+.. .......++|.|||.++++
T Consensus 75 ~~p~gia~~p-df~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~ 151 (352)
T 2ism_A 75 SGLLGLALHP-RFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVT 151 (352)
T ss_dssp CSEEEEEECT-TTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEE
T ss_pred CCceeEEECC-CCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEE
Confidence 3578999999 7 4444 443322 57788887643 1121 2331 1123468999999975554
No 276
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=82.16 E-value=14 Score=27.94 Aligned_cols=53 Identities=13% Similarity=0.330 Sum_probs=35.2
Q ss_pred cCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCee--eEEecC------CCCCeEEEEECCC
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRR--LFELPR------FSNSVASLSYNHG 69 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~--~~~~~~------~~~~v~~v~fspd 69 (114)
....+|+|.| ++++|++-...+.|.+++..++.. +..+.. ....+..|+|+|+
T Consensus 27 ~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 27 NKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp SSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 3467999999 998877765555788887655532 222221 1345679999994
No 277
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=82.08 E-value=10 Score=30.06 Aligned_cols=60 Identities=12% Similarity=0.133 Sum_probs=39.5
Q ss_pred CeEEEEECCCCCCEEEEEeCC------------CcEEEEeCCCCeeeEEec-CCCCCeEEEEECCCCCEEEEEe
Q 033677 17 PVNDVVFSPLSRGAFVTGDNE------------GYVAAWDAQSRRRLFELP-RFSNSVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~D------------g~I~iwD~~~~~~~~~~~-~~~~~v~~v~fspdg~~la~~s 77 (114)
..-.|+|.| .+++++.-..+ ..+.+.+..+++..+-+. .....++.++|+||++.|.+..
T Consensus 477 ~PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 477 SPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 345799999 88876664322 134445666665433333 3457899999999999887654
No 278
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=82.01 E-value=13 Score=27.36 Aligned_cols=80 Identities=13% Similarity=0.304 Sum_probs=47.1
Q ss_pred EEEEECCCCCCEEEEEe-CCCcEEEEeCCCCeeeEE-ecCC----C--CCeEEEEE---CCCCCEEEEEe-CCCcccc-c
Q 033677 19 NDVVFSPLSRGAFVTGD-NEGYVAAWDAQSRRRLFE-LPRF----S--NSVASLSY---NHGGQLLAVAS-SCTYQEA-T 85 (114)
Q Consensus 19 ~~v~f~p~~~~~~~t~s-~Dg~I~iwD~~~~~~~~~-~~~~----~--~~v~~v~f---spdg~~la~~s-~d~~~~~-~ 85 (114)
.++.|++ ...+|+.++ ..|.|..||...+..... +... . ..+..|.| .|+|+++++.. ...|... .
T Consensus 16 E~~~wd~-~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 16 EDTIYDR-TRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp SCEEEET-TTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred cCccCcC-CCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 4788988 666666666 689999999985543322 2221 1 13579999 68888887533 2244422 2
Q ss_pred ccCCCCcEEEEEcC
Q 033677 86 VIEEPPQIFIIRID 99 (114)
Q Consensus 86 ~~~~~~~i~i~~~~ 99 (114)
...+...++...+.
T Consensus 95 ~~~g~~~v~~~Dl~ 108 (334)
T 2p9w_A 95 SSHGASSFHSFNLP 108 (334)
T ss_dssp CSSSCCEEEEEESS
T ss_pred ccCCCCEEEEEcCC
Confidence 23334444444443
No 279
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=81.99 E-value=12 Score=26.92 Aligned_cols=50 Identities=18% Similarity=0.279 Sum_probs=33.5
Q ss_pred cCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCee--eEEec---CCCCCeEEEEECCC
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRR--LFELP---RFSNSVASLSYNHG 69 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~--~~~~~---~~~~~v~~v~fspd 69 (114)
.....++|.| ++.++++ ..+|.|.+++ +++. +..+. ........|+|+|+
T Consensus 31 ~~P~~ia~~p-dG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pd 85 (352)
T 2ism_A 31 EVPWALAFLP-DGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPR 85 (352)
T ss_dssp SCEEEEEECT-TSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTT
T ss_pred CCceEEEEcC-CCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCC
Confidence 3467899999 8886655 4569999998 3432 11111 12346789999998
No 280
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=81.90 E-value=2.3 Score=29.22 Aligned_cols=53 Identities=9% Similarity=0.090 Sum_probs=34.4
Q ss_pred eEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEE
Q 033677 18 VNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAV 75 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~ 75 (114)
+.++.+.+ ++.++ .++ +.|..|| .+++.+..+......+.++.+.++|.+++.
T Consensus 179 ~~~~~~d~-~g~l~-v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~ 231 (330)
T 3hxj_A 179 TSAASIGK-DGTIY-FGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVT 231 (330)
T ss_dssp CSCCEECT-TCCEE-EES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEE
T ss_pred eeeeEEcC-CCEEE-EEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEE
Confidence 44556666 55544 444 7788888 666666655555566778888888876553
No 281
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=81.46 E-value=2.9 Score=28.75 Aligned_cols=56 Identities=13% Similarity=0.189 Sum_probs=38.4
Q ss_pred eEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEE
Q 033677 18 VNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVA 76 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~ 76 (114)
+..+...+ ++. |+.++.++.|..||.. ++.+..+......+.++.+.++|.+++..
T Consensus 139 ~~~~~~~~-~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t 194 (330)
T 3hxj_A 139 YATPIVSE-DGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS 194 (330)
T ss_dssp CSCCEECT-TSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES
T ss_pred eeeeEEcC-CCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe
Confidence 34456666 555 5667778999999998 76666665445566777887888766543
No 282
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=81.44 E-value=11 Score=27.71 Aligned_cols=61 Identities=8% Similarity=0.034 Sum_probs=40.8
Q ss_pred cCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEE
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVA 76 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~ 76 (114)
....+|++.+..++++++-...+.|.+.|++.......+.........|++.|.+..|..+
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~t 219 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWT 219 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEE
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEE
Confidence 3467899987234566666677899999988655443344444567899999965555443
No 283
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=81.22 E-value=9.2 Score=27.89 Aligned_cols=60 Identities=8% Similarity=-0.128 Sum_probs=37.1
Q ss_pred cCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEE
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAV 75 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~ 75 (114)
..+.+|+|++..+.++++-...+.|..++.........+.........+++.+.+..|..
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~ 175 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYW 175 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEE
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEE
Confidence 346789999723455666666789999998866533333322334567888875544433
No 284
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=81.17 E-value=12 Score=26.24 Aligned_cols=36 Identities=14% Similarity=0.173 Sum_probs=28.8
Q ss_pred eEEEEECCCCCCEEEEEeCCC--cEEEEeCCCCeeeEEec
Q 033677 18 VNDVVFSPLSRGAFVTGDNEG--YVAAWDAQSRRRLFELP 55 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~Dg--~I~iwD~~~~~~~~~~~ 55 (114)
+.+|.|++ +.++.+.+.+| .|+.+|+.+++.+....
T Consensus 23 tqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~ 60 (243)
T 3mbr_X 23 TEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAE 60 (243)
T ss_dssp EEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEE
T ss_pred cccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEe
Confidence 56889987 45777777764 89999999999887775
No 285
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=79.67 E-value=1.8 Score=36.50 Aligned_cols=37 Identities=8% Similarity=0.108 Sum_probs=30.7
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEe
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFEL 54 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~ 54 (114)
.+.+++..+ +...+++-+.|+++++|++.+++++.+.
T Consensus 239 ~~vs~~~~~-~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEET-TTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccC-CccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 345566667 7789999999999999999999988775
No 286
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=79.49 E-value=14 Score=26.30 Aligned_cols=62 Identities=15% Similarity=0.072 Sum_probs=38.1
Q ss_pred cCeEEEEECCCCCC-EEEEEe-CCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeC
Q 033677 16 VPVNDVVFSPLSRG-AFVTGD-NEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 16 ~~V~~v~f~p~~~~-~~~t~s-~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~ 78 (114)
...++|++.| .+. ++++-. ..+.|...+++...........-...+.++|+|++..|..+..
T Consensus 122 ~~P~giavdp-~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~ 185 (318)
T 3sov_A 122 DQPRAIALDP-SSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADA 185 (318)
T ss_dssp SSEEEEEEEG-GGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CCccEEEEeC-CCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEEC
Confidence 3467899998 554 455542 3578888887643322222233345689999997766655543
No 287
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=79.19 E-value=14 Score=26.10 Aligned_cols=61 Identities=18% Similarity=0.193 Sum_probs=38.5
Q ss_pred cCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEec-C---CCCCeEEEEECCCCCEEEEEeC
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELP-R---FSNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~-~---~~~~v~~v~fspdg~~la~~s~ 78 (114)
..+..+.+.| ++.++ .++.+|.+.+++.+.++....+. . ....+..+.|.+++.+++++..
T Consensus 205 ~~~~~~~~~~-~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~ 269 (327)
T 2xbg_A 205 RRLHNMGFTP-DGRLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGA 269 (327)
T ss_dssp SCEEEEEECT-TSCEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEEST
T ss_pred CccceeEECC-CCCEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCC
Confidence 3467888888 77655 55567888776433343322222 1 1235889999998888887653
No 288
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=78.72 E-value=4.7 Score=31.55 Aligned_cols=57 Identities=11% Similarity=0.079 Sum_probs=37.2
Q ss_pred EEEECCCCCCEEEEEeCC-----------CcEEEEeCCCCeeeEEecCC---CCCeEEEEECCCCCEEEEEeC
Q 033677 20 DVVFSPLSRGAFVTGDNE-----------GYVAAWDAQSRRRLFELPRF---SNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 20 ~v~f~p~~~~~~~t~s~D-----------g~I~iwD~~~~~~~~~~~~~---~~~v~~v~fspdg~~la~~s~ 78 (114)
+.+..| ++.+++.||.+ ..+.+||..+.+- ..+... ..-.....+.|||+++++|+.
T Consensus 460 ~~~~l~-~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W-~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 460 TSVVLP-DGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTF-YKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EEEECT-TSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEE-EECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CeEECC-CCCEEEECCcccCcCcCCCCcccceEEEcCCCCce-eecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 345667 78899998864 4688999977542 222211 112234556799999999885
No 289
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=78.63 E-value=12 Score=28.87 Aligned_cols=63 Identities=17% Similarity=0.247 Sum_probs=42.8
Q ss_pred CeEEEEECCC-CCCEEEEEeCCCcEEEEeCCCCeeeEEecCC---CCCeEEEEE-------CCCCCEEEEEeCC
Q 033677 17 PVNDVVFSPL-SRGAFVTGDNEGYVAAWDAQSRRRLFELPRF---SNSVASLSY-------NHGGQLLAVASSC 79 (114)
Q Consensus 17 ~V~~v~f~p~-~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~---~~~v~~v~f-------spdg~~la~~s~d 79 (114)
....|+|.|. .++++++-...+.|++.|+.++......... ......++| +++|..|.++...
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~ 213 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDY 213 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECC
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCC
Confidence 4678999982 2456666655578899999887755443321 235789999 9999866555443
No 290
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=78.42 E-value=9.9 Score=27.52 Aligned_cols=58 Identities=10% Similarity=-0.003 Sum_probs=36.7
Q ss_pred cCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCe-eeEEec---CCCCCeEEEEECCC----CCEEEEE
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRR-RLFELP---RFSNSVASLSYNHG----GQLLAVA 76 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~-~~~~~~---~~~~~v~~v~fspd----g~~la~~ 76 (114)
.....++|.| ++.++++ ..+|.|.++|. +++ .+..+. ........|+|+|+ +.++++-
T Consensus 29 ~~P~~ia~~p-dG~l~V~-e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~ 94 (354)
T 3a9g_A 29 EVPWSIAPLG-GGRYLVT-ERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYA 94 (354)
T ss_dssp SCEEEEEEEE-TTEEEEE-ETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCCeEEEEcC-CCeEEEE-eCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEE
Confidence 3467899999 8875555 45699999874 444 222221 12345789999997 5544443
No 291
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=77.59 E-value=9.2 Score=27.70 Aligned_cols=58 Identities=10% Similarity=0.114 Sum_probs=34.1
Q ss_pred CeEEEEECCCC---CCEEEEEeC----C----CcEEEEeCCCC-------eee-EEecCC-CCCeEEEEECCCCCEEEE
Q 033677 17 PVNDVVFSPLS---RGAFVTGDN----E----GYVAAWDAQSR-------RRL-FELPRF-SNSVASLSYNHGGQLLAV 75 (114)
Q Consensus 17 ~V~~v~f~p~~---~~~~~t~s~----D----g~I~iwD~~~~-------~~~-~~~~~~-~~~v~~v~fspdg~~la~ 75 (114)
....|+|+| + +..|+.+.. + ..|..|+.... +.+ ..+... ......++|.|||.++++
T Consensus 74 g~~gia~~p-df~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt 151 (354)
T 3a9g_A 74 GLLGLALHP-EFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYIT 151 (354)
T ss_dssp SEEEEEECT-TTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEE
T ss_pred ceeeEEeCC-CCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEE
Confidence 478999999 7 444444332 3 56777877653 111 112211 123467999999986654
No 292
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=77.55 E-value=17 Score=26.02 Aligned_cols=60 Identities=8% Similarity=-0.114 Sum_probs=37.1
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEE
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVA 76 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~ 76 (114)
.+.+|+|++..+.++++-...+.|..++.........+.........+++.+.+..|..+
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~ 133 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWT 133 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEE
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEE
Confidence 357899998234555666667899999988654333233223445688998755444333
No 293
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=77.03 E-value=11 Score=26.81 Aligned_cols=60 Identities=5% Similarity=0.023 Sum_probs=38.8
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEE
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVA 76 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~ 76 (114)
...+|++.+..++++++-...+.|.+++++.................+++.|.+..|..+
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~t 139 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWT 139 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEE
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEE
Confidence 456788887234566666677899999987543333333444567899999865544443
No 294
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=76.62 E-value=17 Score=25.61 Aligned_cols=56 Identities=14% Similarity=0.274 Sum_probs=35.6
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEE-EeC--CCCeeeEEecCCCCCeEEEEECCCCCEEEEE
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAA-WDA--QSRRRLFELPRFSNSVASLSYNHGGQLLAVA 76 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~i-wD~--~~~~~~~~~~~~~~~v~~v~fspdg~~la~~ 76 (114)
.+..+.+.| ++.+++.+. +|.+.. +|- .+-+.+. ......+..+.+.+++.+++++
T Consensus 164 ~~~~~~~~~-~~~~~~~g~-~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~~~ 222 (327)
T 2xbg_A 164 VMRNLNRSP-SGEYVAVSS-RGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWMIV 222 (327)
T ss_dssp CEEEEEECT-TSCEEEEET-TSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEEEE
T ss_pred ceEEEEEcC-CCcEEEEEC-CCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEEEe
Confidence 478899999 777666554 554444 443 2223221 2345678899999999877654
No 295
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=75.25 E-value=27 Score=27.67 Aligned_cols=59 Identities=12% Similarity=0.151 Sum_probs=41.8
Q ss_pred cCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecC-----CCCCeEEEEECCCCCEEEEE
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPR-----FSNSVASLSYNHGGQLLAVA 76 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~-----~~~~v~~v~fspdg~~la~~ 76 (114)
..|.++...+ ++++|..|..++-|.+||.++++.. .+.. ....|.++...++|.+.+..
T Consensus 406 ~~v~~i~~d~-~g~~lWigt~~~Gl~~~d~~~~~~~-~~~~~~~~l~~~~v~~i~~d~~g~lwigt 469 (795)
T 4a2l_A 406 NNIKAVYVDE-KKSLVYIGTHAGGLSILHRNSGQVE-NFNQRNSQLVNENVYAILPDGEGNLWLGT 469 (795)
T ss_dssp SCEEEEEEET-TTTEEEEEETTTEEEEEETTTCCEE-EECTTTSCCSCSCEEEEEECSSSCEEEEE
T ss_pred ccEEEEEEcC-CCCEEEEEeCcCceeEEeCCCCcEE-EeecCCCCcCCCeeEEEEECCCCCEEEEe
Confidence 4588888888 7774666777677899999877533 3321 24578999999989866543
No 296
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=74.10 E-value=16 Score=29.81 Aligned_cols=60 Identities=8% Similarity=0.015 Sum_probs=40.7
Q ss_pred cCeEEEEECCCCC-CEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEE
Q 033677 16 VPVNDVVFSPLSR-GAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVA 76 (114)
Q Consensus 16 ~~V~~v~f~p~~~-~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~ 76 (114)
....+|++.+ .+ +++++-...+.|.+.++........+.........|++.|.+..|..+
T Consensus 471 ~~P~GLAvD~-~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwt 531 (791)
T 3m0c_C 471 QAPDGLAVDW-IHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWT 531 (791)
T ss_dssp SCCCEEEEET-TTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEE
T ss_pred CCcceeeeee-cCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEe
Confidence 3456899988 55 566777778899999988654333333344568899999975444443
No 297
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=73.50 E-value=17 Score=26.11 Aligned_cols=52 Identities=15% Similarity=0.174 Sum_probs=33.6
Q ss_pred ecCeEEEEECCCCCC-EEEEEeCCCcEEEEeCCCCeeeEEec-------CCCCCeEEEEECCC
Q 033677 15 LVPVNDVVFSPLSRG-AFVTGDNEGYVAAWDAQSRRRLFELP-------RFSNSVASLSYNHG 69 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~-~~~t~s~Dg~I~iwD~~~~~~~~~~~-------~~~~~v~~v~fspd 69 (114)
+.....|+|.| +++ ++++- ..|.|.+++.. +.....+. .....+..|+|+|+
T Consensus 17 l~~P~~i~~~p-dG~~l~V~e-~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pd 76 (353)
T 2g8s_A 17 LDHPWALAFLP-DNHGMLITL-RGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPD 76 (353)
T ss_dssp ESSEEEEEECS-TTCCEEEEE-TTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTT
T ss_pred CCCcEEEEEcC-CCCEEEEEe-CCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCC
Confidence 34567999999 988 66554 57999999854 32211111 11335689999995
No 298
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=69.48 E-value=32 Score=25.88 Aligned_cols=19 Identities=16% Similarity=0.309 Sum_probs=15.3
Q ss_pred CeEEEEECCCCCCEEEEEeC
Q 033677 17 PVNDVVFSPLSRGAFVTGDN 36 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~ 36 (114)
....|+|.| ++.++++.+.
T Consensus 145 ~~~~l~f~p-DG~Lyv~~Gd 163 (454)
T 1cru_A 145 QSGRLVIGP-DQKIYYTIGD 163 (454)
T ss_dssp CEEEEEECT-TSCEEEEECC
T ss_pred CCCeEeECC-CCeEEEEECC
Confidence 468899999 9988887654
No 299
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=69.02 E-value=46 Score=27.14 Aligned_cols=61 Identities=8% Similarity=-0.079 Sum_probs=39.8
Q ss_pred CeEEEEECCCCC-CEEEEEeCC-CcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeC
Q 033677 17 PVNDVVFSPLSR-GAFVTGDNE-GYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 17 ~V~~v~f~p~~~-~~~~t~s~D-g~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~ 78 (114)
...+|+++| .. .++++-..+ +.|.+.++........+.......+.|++++.+..|..+..
T Consensus 515 ~P~gIaVDp-~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~ 577 (791)
T 3m0c_C 515 KPRAIVVDP-VHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDS 577 (791)
T ss_dssp CEEEEEEET-TTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CcceEEEec-CCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeC
Confidence 467999999 64 555554333 78888888754433333333456889999987666655543
No 300
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=68.74 E-value=6.1 Score=28.00 Aligned_cols=28 Identities=29% Similarity=0.471 Sum_probs=23.2
Q ss_pred CEEEEEeCCCcEEEEeCCCCeeeEEecC
Q 033677 29 GAFVTGDNEGYVAAWDAQSRRRLFELPR 56 (114)
Q Consensus 29 ~~~~t~s~Dg~I~iwD~~~~~~~~~~~~ 56 (114)
..|+.++.+|.|.++|.++++.+.....
T Consensus 319 ~~l~v~~~~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 319 GNLVVGDSEGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEec
Confidence 5788888899999999999987766654
No 301
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=68.72 E-value=12 Score=30.45 Aligned_cols=35 Identities=11% Similarity=0.193 Sum_probs=27.6
Q ss_pred eEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEec
Q 033677 18 VNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELP 55 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~ 55 (114)
|.++.+. ...+++-+.|.++++||+++++++....
T Consensus 224 Is~~~~~---~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 224 ISCKLFH---ERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEET---TTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEeccC---CcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 4444443 4689999999999999999998776654
No 302
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=68.13 E-value=14 Score=28.80 Aligned_cols=56 Identities=16% Similarity=0.270 Sum_probs=37.2
Q ss_pred EEEECCCCCCEEEEEeC-CCcEEEEeCCCCeeeEEecCC--CCCeEEEEECCCCCEEEEEe
Q 033677 20 DVVFSPLSRGAFVTGDN-EGYVAAWDAQSRRRLFELPRF--SNSVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 20 ~v~f~p~~~~~~~t~s~-Dg~I~iwD~~~~~~~~~~~~~--~~~v~~v~fspdg~~la~~s 77 (114)
++++.+ ++.+++.||. +..+.+||..+.+-. ..... ...-.+++.-++|+++++|+
T Consensus 247 ~~~~~~-~g~lyv~GG~~~~~v~~yd~~t~~W~-~~~~~~~~R~~~s~~~~~dg~iyv~GG 305 (656)
T 1k3i_A 247 GISMDG-NGQIVVTGGNDAKKTSLYDSSSDSWI-PGPDMQVARGYQSSATMSDGRVFTIGG 305 (656)
T ss_dssp EEEECT-TSCEEEECSSSTTCEEEEEGGGTEEE-ECCCCSSCCSSCEEEECTTSCEEEECC
T ss_pred cccCCC-CCCEEEeCCCCCCceEEecCcCCcee-ECCCCCccccccceEEecCCeEEEEeC
Confidence 466677 7889999885 458999999876422 22111 11223566667899999987
No 303
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=67.84 E-value=26 Score=24.60 Aligned_cols=29 Identities=17% Similarity=0.361 Sum_probs=23.4
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeeeEEecC
Q 033677 28 RGAFVTGDNEGYVAAWDAQSRRRLFELPR 56 (114)
Q Consensus 28 ~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~ 56 (114)
+..++.++.++.|..+|.++++.+..+..
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~ 81 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSL 81 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecC
Confidence 35788888899999999999987766553
No 304
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=67.65 E-value=31 Score=27.14 Aligned_cols=58 Identities=9% Similarity=0.026 Sum_probs=40.6
Q ss_pred cCeEEEEECCCCC-CEEEEEeCCCcEEEEeCCCCeeeEEe-cCCCCCeEEEEECC-CCCEEEE
Q 033677 16 VPVNDVVFSPLSR-GAFVTGDNEGYVAAWDAQSRRRLFEL-PRFSNSVASLSYNH-GGQLLAV 75 (114)
Q Consensus 16 ~~V~~v~f~p~~~-~~~~t~s~Dg~I~iwD~~~~~~~~~~-~~~~~~v~~v~fsp-dg~~la~ 75 (114)
..+.+|++.+ .+ +++++-+..+.|.+.+++.. ....+ .........|++.| .|.++.+
T Consensus 389 ~~p~glAvD~-~~~nLY~td~~~~~I~v~~~~G~-~~~~l~~~~l~~Pr~iavdp~~g~ly~t 449 (628)
T 4a0p_A 389 IQPYDLSIDI-YSRYIYWTCEATNVINVTRLDGR-SVGVVLKGEQDRPRAVVVNPEKGYMYFT 449 (628)
T ss_dssp CCEEEEEEET-TTTEEEEEETTTTEEEEEETTSC-EEEEEEECTTCCEEEEEEETTTTEEEEE
T ss_pred CCcceEEeec-cCCeEEEEcCCCCEEEEEECCCC-eEEEEEeCCCCceeeEEEecCCCeEEEe
Confidence 3578999998 64 56677777889999998744 33333 33445689999999 6665554
No 305
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=67.41 E-value=45 Score=26.42 Aligned_cols=61 Identities=15% Similarity=0.158 Sum_probs=40.9
Q ss_pred cCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecC--------CCCCeEEEEECCCCCEEEEEeC
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPR--------FSNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~--------~~~~v~~v~fspdg~~la~~s~ 78 (114)
..|.++...+ ++++ ..|..++-|..||..++........ ....|.++...++|.+|.+|+.
T Consensus 357 ~~V~~i~~d~-~g~l-WiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~ 425 (795)
T 4a2l_A 357 NVVSCIVEDK-DKNL-WIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTH 425 (795)
T ss_dssp SSEEEEEECT-TSCE-EEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEET
T ss_pred CeeEEEEECC-CCCE-EEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeC
Confidence 4588999888 7665 4577777788999887653322111 1357899999889984445554
No 306
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=66.86 E-value=24 Score=27.66 Aligned_cols=60 Identities=3% Similarity=-0.011 Sum_probs=39.9
Q ss_pred cCeEEEEECCCCC-CEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEE
Q 033677 16 VPVNDVVFSPLSR-GAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVA 76 (114)
Q Consensus 16 ~~V~~v~f~p~~~-~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~ 76 (114)
....+|++.+ .+ +++++-...+.|.+.|++.................|++.|.+..|..+
T Consensus 84 ~~P~GlAvD~-~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~t 144 (619)
T 3s94_A 84 LSPDGLACDW-LGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWT 144 (619)
T ss_dssp SCEEEEEEET-TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEE
T ss_pred CCcCeEEEEe-cCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEe
Confidence 4578999998 55 566666677899999988654333332344556789999864444333
No 307
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=63.05 E-value=6.6 Score=31.34 Aligned_cols=60 Identities=7% Similarity=-0.092 Sum_probs=34.2
Q ss_pred CeEEEEECCCCC-CEEEEEeCC-CcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEe
Q 033677 17 PVNDVVFSPLSR-GAFVTGDNE-GYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVAS 77 (114)
Q Consensus 17 ~V~~v~f~p~~~-~~~~t~s~D-g~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s 77 (114)
...+|++.| .+ .++++-... +.|.+.++................+.|+|+|++..|..+.
T Consensus 497 ~P~giavDp-~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD 558 (699)
T 1n7d_A 497 KPRAIVVDP-VHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVD 558 (699)
T ss_dssp CCCCEECCS-SSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEE
T ss_pred CcceEEEcc-CCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEe
Confidence 356888988 54 455554333 6888877764322221222233456899998765554443
No 308
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=62.95 E-value=47 Score=26.08 Aligned_cols=61 Identities=8% Similarity=-0.098 Sum_probs=38.2
Q ss_pred cCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEE
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVA 76 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~ 76 (114)
..+.+|+|++..+.++++-..++.|..+++........+......+..+++.+.+..|..+
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~t 97 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWA 97 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEE
Confidence 3467899999334556666678899999987543322233222456688888765544433
No 309
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=61.87 E-value=18 Score=27.98 Aligned_cols=26 Identities=8% Similarity=0.093 Sum_probs=21.5
Q ss_pred EEEEEeCCCcEEEEeCCCCeeeEEec
Q 033677 30 AFVTGDNEGYVAAWDAQSRRRLFELP 55 (114)
Q Consensus 30 ~~~t~s~Dg~I~iwD~~~~~~~~~~~ 55 (114)
.++.++.+|.+.++|.++++.+..++
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEK 343 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeec
Confidence 56778889999999999998876654
No 310
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=61.60 E-value=38 Score=24.77 Aligned_cols=57 Identities=12% Similarity=0.267 Sum_probs=34.8
Q ss_pred eEEEEECCCCCCEEEEEeC-------------CCcEEEEeCCCC---------eeeEEecCCCCCeEEEEECCCCCEEEE
Q 033677 18 VNDVVFSPLSRGAFVTGDN-------------EGYVAAWDAQSR---------RRLFELPRFSNSVASLSYNHGGQLLAV 75 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~-------------Dg~I~iwD~~~~---------~~~~~~~~~~~~v~~v~fspdg~~la~ 75 (114)
...|.|.| ++.++++.++ .|.|...+.+.. ..+.. .++. ....++|+|+|.++++
T Consensus 142 g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a-~G~R-Np~Gla~dp~G~L~~~ 218 (347)
T 3das_A 142 GGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYS-YGHR-NVQGLAWDDKQRLFAS 218 (347)
T ss_dssp CCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEE-BCCS-BCCEEEECTTCCEEEE
T ss_pred CccccCCC-CCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEe-eCCC-CcceEEECCCCCEEEE
Confidence 45699999 9988887653 355555555422 11111 1333 3468999999988775
Q ss_pred Ee
Q 033677 76 AS 77 (114)
Q Consensus 76 ~s 77 (114)
=.
T Consensus 219 d~ 220 (347)
T 3das_A 219 EF 220 (347)
T ss_dssp EC
T ss_pred ec
Confidence 43
No 311
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=59.72 E-value=36 Score=25.21 Aligned_cols=66 Identities=11% Similarity=0.146 Sum_probs=46.2
Q ss_pred cCeEEEEE--CCCCCC-EEEEEeCCCcEEEEeCC-------CCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC--Ccc
Q 033677 16 VPVNDVVF--SPLSRG-AFVTGDNEGYVAAWDAQ-------SRRRLFELPRFSNSVASLSYNHGGQLLAVASSC--TYQ 82 (114)
Q Consensus 16 ~~V~~v~f--~p~~~~-~~~t~s~Dg~I~iwD~~-------~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d--~~~ 82 (114)
..+..+++ +|..+. ++++...+|.+..|++. +.+.++++. ...++-.+.+.+....|.++-.+ .|.
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~EgcvvDd~~g~Lyv~eEd~GIw~ 205 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMAADDEYGRLYIAEEDEAIWK 205 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEEEETTTTEEEEEETTTEEEE
T ss_pred CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEEEcCCCCeEEEecccceEEE
Confidence 44667888 772333 57777888999999983 234555554 35678899999877788888777 454
No 312
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=59.03 E-value=45 Score=23.88 Aligned_cols=60 Identities=10% Similarity=0.158 Sum_probs=39.5
Q ss_pred CeEEEEECCC------CCCEEEEEeCCCcEEEEeCCCCeeeEE--e-cCCCCCeEEEEECCCCCEEEEE
Q 033677 17 PVNDVVFSPL------SRGAFVTGDNEGYVAAWDAQSRRRLFE--L-PRFSNSVASLSYNHGGQLLAVA 76 (114)
Q Consensus 17 ~V~~v~f~p~------~~~~~~t~s~Dg~I~iwD~~~~~~~~~--~-~~~~~~v~~v~fspdg~~la~~ 76 (114)
.+..++|.+. ++.+|++....+.|...+++.++.... + ......+..+++.|||.++++.
T Consensus 272 ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~t 340 (353)
T 2g8s_A 272 AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLT 340 (353)
T ss_dssp CEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEE
T ss_pred CcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEE
Confidence 4667787531 356777776778888888776543322 2 1234578999999999866643
No 313
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=57.90 E-value=56 Score=25.65 Aligned_cols=36 Identities=11% Similarity=0.287 Sum_probs=29.0
Q ss_pred EEEECCCCCCEEEEEeCCCc-------------------EEEEeCCCCeeeEEecC
Q 033677 20 DVVFSPLSRGAFVTGDNEGY-------------------VAAWDAQSRRRLFELPR 56 (114)
Q Consensus 20 ~v~f~p~~~~~~~t~s~Dg~-------------------I~iwD~~~~~~~~~~~~ 56 (114)
.+++.| ...+++.+..++. |..+|.++++.+..++.
T Consensus 234 ~~a~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~ 288 (668)
T 1kv9_A 234 SMAYDP-ELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQV 288 (668)
T ss_dssp CEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEES
T ss_pred ceEEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeec
Confidence 478888 7788888877763 99999999998877763
No 314
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=57.12 E-value=39 Score=25.64 Aligned_cols=61 Identities=16% Similarity=0.260 Sum_probs=37.3
Q ss_pred ecCeEEEEECCCCCC-EEEEEeCCCcEEEEeCCCCe---eeEEecC---------CCCCeEEEEECCC----CCEEEEE
Q 033677 15 LVPVNDVVFSPLSRG-AFVTGDNEGYVAAWDAQSRR---RLFELPR---------FSNSVASLSYNHG----GQLLAVA 76 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~-~~~t~s~Dg~I~iwD~~~~~---~~~~~~~---------~~~~v~~v~fspd----g~~la~~ 76 (114)
+.....|+|.| ++. .|+.+-..|.|++++..... .+..+.. ...-+..|+|+|+ +.++++-
T Consensus 13 L~~P~~~a~~p-dG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~y 90 (463)
T 2wg3_C 13 LRQPVGALHSG-DGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSY 90 (463)
T ss_dssp ESSEEEEECCS-SSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEE
T ss_pred CCCceEEEECC-CCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEE
Confidence 34567899999 874 34455568999999754321 1222211 1345789999996 5544443
No 315
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=56.31 E-value=60 Score=24.24 Aligned_cols=46 Identities=9% Similarity=0.110 Sum_probs=33.9
Q ss_pred EEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEE
Q 033677 20 DVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSY 66 (114)
Q Consensus 20 ~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~f 66 (114)
++..++ ....++.-..-|.|++||++++.+++.-+-..++|-..+.
T Consensus 264 amqvs~-kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~ 309 (365)
T 2xzh_A 264 AMQISE-KHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAP 309 (365)
T ss_dssp EEEEET-TTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred EEEecc-cCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecc
Confidence 455555 5567888888899999999999999877655555554443
No 316
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=55.15 E-value=54 Score=23.90 Aligned_cols=28 Identities=18% Similarity=0.319 Sum_probs=24.6
Q ss_pred CEEEEEeCCCcEEEEeCCCCeeeEEecC
Q 033677 29 GAFVTGDNEGYVAAWDAQSRRRLFELPR 56 (114)
Q Consensus 29 ~~~~t~s~Dg~I~iwD~~~~~~~~~~~~ 56 (114)
.+++.++.||.|...|..+++...+++.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~ 38 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEP 38 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECG
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecC
Confidence 5788999999999999999998887764
No 317
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=54.64 E-value=7.2 Score=31.10 Aligned_cols=58 Identities=9% Similarity=0.059 Sum_probs=35.8
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEE
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLA 74 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la 74 (114)
...+|++.+..++++++-...+.|.+.|+........+.........|+++|.+..|.
T Consensus 454 ~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly 511 (699)
T 1n7d_A 454 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMY 511 (699)
T ss_dssp -CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCE
T ss_pred CcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEE
Confidence 3467888862345566656678899999876543333332234567889998654333
No 318
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=54.33 E-value=28 Score=27.33 Aligned_cols=27 Identities=15% Similarity=0.087 Sum_probs=22.2
Q ss_pred CEEEEEeCCCcEEEEeCCCCeeeEEec
Q 033677 29 GAFVTGDNEGYVAAWDAQSRRRLFELP 55 (114)
Q Consensus 29 ~~~~t~s~Dg~I~iwD~~~~~~~~~~~ 55 (114)
..++.++.+|.+.++|.++++.+....
T Consensus 324 ~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 324 KLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCcEEEEEECCCCCEeeccc
Confidence 357778899999999999998876654
No 319
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=53.09 E-value=21 Score=27.79 Aligned_cols=42 Identities=17% Similarity=0.151 Sum_probs=24.6
Q ss_pred CCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC
Q 033677 37 EGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 37 Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d 79 (114)
+|.|..||+.+++.+.+.+.. .++..-.....|.++.+++.|
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagglvf~g~~d 506 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGD 506 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEES-SCCCSCCEEETTTEEEEECTT
T ss_pred cceEEEEECCCCCEEEEecCC-CCCcccceEeCCCEEEEECCC
Confidence 688999999999887666422 122111111234566667666
No 320
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=51.29 E-value=1.1e+02 Score=25.98 Aligned_cols=58 Identities=10% Similarity=0.005 Sum_probs=36.5
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeE-EecCCCCCeEEEEECCC------CCEEEEEeC
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLF-ELPRFSNSVASLSYNHG------GQLLAVASS 78 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~-~~~~~~~~v~~v~fspd------g~~la~~s~ 78 (114)
.|..++.+. .+++.+. ++.+.++.+++++... .-...+..|+++++.|. +.++|+|..
T Consensus 515 ~I~~As~n~---~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~ 579 (1158)
T 3ei3_A 515 NISVASCNS---SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLW 579 (1158)
T ss_dssp CCCEEEECS---SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEET
T ss_pred EEEEEEeCC---CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEEC
Confidence 466666665 3455554 5778877776553221 11234678999999864 368999985
No 321
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=50.90 E-value=89 Score=24.60 Aligned_cols=58 Identities=16% Similarity=0.169 Sum_probs=38.0
Q ss_pred cCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCC-----CCCeEEEEECCCCCEEEEE
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRF-----SNSVASLSYNHGGQLLAVA 76 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~-----~~~v~~v~fspdg~~la~~ 76 (114)
..|.++...+ ++.++ .|.. +-|..||..+++........ ...|.++...++|.+.+..
T Consensus 450 ~~v~~i~~d~-~g~lw-igt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt 512 (781)
T 3v9f_A 450 LDVRVFYEDK-NKKIW-IGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGT 512 (781)
T ss_dssp CCEEEEEECT-TSEEE-EEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEE
T ss_pred CeEEEEEECC-CCCEE-EEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEE
Confidence 4588888887 66544 4555 45788998876533222211 3578999999999876543
No 322
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=50.16 E-value=72 Score=24.52 Aligned_cols=43 Identities=9% Similarity=0.136 Sum_probs=29.5
Q ss_pred CCcEEEEeCCCCeeeEEecC----CCCCeEEEEECCCCCEEEEEeCC
Q 033677 37 EGYVAAWDAQSRRRLFELPR----FSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 37 Dg~I~iwD~~~~~~~~~~~~----~~~~v~~v~fspdg~~la~~s~d 79 (114)
++.|+.-++......+.+.. ....|..+..||+|++||+.+..
T Consensus 40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~ 86 (452)
T 3pbp_A 40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDN 86 (452)
T ss_dssp TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSS
T ss_pred CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCC
Confidence 46777667775444444432 23368889999999999988765
No 323
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=48.95 E-value=80 Score=25.38 Aligned_cols=61 Identities=15% Similarity=0.095 Sum_probs=41.6
Q ss_pred eEEEEECCCCCCEEEEEeCCCcEEEEeCCCC----------eeeEEecCCCCCeEEEE-----ECCCCCEEEEEeCC
Q 033677 18 VNDVVFSPLSRGAFVTGDNEGYVAAWDAQSR----------RRLFELPRFSNSVASLS-----YNHGGQLLAVASSC 79 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~----------~~~~~~~~~~~~v~~v~-----fspdg~~la~~s~d 79 (114)
..-.+|.+ +++.+.|--.|..|..|++... ..+.++.-|..+-...+ -.|||++|++...-
T Consensus 380 PlHt~Fd~-~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~ 455 (638)
T 3sbq_A 380 PLHTTFDG-RGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKF 455 (638)
T ss_dssp EEEEEECS-SSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESC
T ss_pred ccEEEECC-CCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEeccc
Confidence 45678999 8877777778999999998753 34444444443333222 26899999987653
No 324
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=48.85 E-value=79 Score=25.47 Aligned_cols=53 Identities=15% Similarity=0.283 Sum_probs=34.5
Q ss_pred cCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCC-------CCCeEEEEECCC
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRF-------SNSVASLSYNHG 69 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~-------~~~v~~v~fspd 69 (114)
..|.+|+++|.+...++.+...|.|...+ +.++.-..+... ...|.+|++.|.
T Consensus 15 g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~ 74 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPN 74 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETT
T ss_pred CcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCC
Confidence 46899999994457777888777766554 334433333221 236899999884
No 325
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=45.46 E-value=1.1e+02 Score=23.96 Aligned_cols=61 Identities=8% Similarity=0.004 Sum_probs=36.1
Q ss_pred cCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEE
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVA 76 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~ 76 (114)
..+.+|+|.+.++.++++-...+.|..++.........+......+..+++.+.+..|..+
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~t 409 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWT 409 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEE
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEE
Confidence 3467889998333455555567889989887543222232223456688888755444333
No 326
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=44.86 E-value=1.1e+02 Score=23.84 Aligned_cols=46 Identities=9% Similarity=0.110 Sum_probs=34.7
Q ss_pred EEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEE
Q 033677 20 DVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSY 66 (114)
Q Consensus 20 ~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~f 66 (114)
++..++ ....+..-..-|.|++||++++.+++.-+-..++|-..+.
T Consensus 263 amqvs~-kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~ 308 (494)
T 1bpo_A 263 AMQISE-KHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAP 308 (494)
T ss_dssp EEEEET-TTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred EEEecc-cCCEEEEEecCceEEEEecccceeeeeecccCCceEEecc
Confidence 456666 5678888888999999999999999877655555554443
No 327
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=41.68 E-value=1.1e+02 Score=23.07 Aligned_cols=17 Identities=18% Similarity=0.261 Sum_probs=12.8
Q ss_pred CCeEEEEECCCCCEEEE
Q 033677 59 NSVASLSYNHGGQLLAV 75 (114)
Q Consensus 59 ~~v~~v~fspdg~~la~ 75 (114)
.....|+|.|||.++++
T Consensus 139 H~g~~l~fgpDG~LYv~ 155 (463)
T 2wg3_C 139 HLGGQLLFGPDGFLYII 155 (463)
T ss_dssp SCEEEEEECTTSCEEEE
T ss_pred ccCCcEeECCCCcEEEE
Confidence 34678999999976554
No 328
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=39.73 E-value=1.3e+02 Score=23.84 Aligned_cols=58 Identities=17% Similarity=0.225 Sum_probs=35.2
Q ss_pred CeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCC-------CCCeEEEEECCC--CCEEEE
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRF-------SNSVASLSYNHG--GQLLAV 75 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~-------~~~v~~v~fspd--g~~la~ 75 (114)
.|.+|+++|.+.+.++.+...|.|..++- .++.-..+... ...|.+|++.|. +.+++.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D-~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~ 90 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDP-STETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIV 90 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEET-TTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEE
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCC-CCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEE
Confidence 58899999933467777776676665542 23333333221 235889999983 344443
No 329
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=37.34 E-value=1.5e+02 Score=23.29 Aligned_cols=57 Identities=12% Similarity=0.151 Sum_probs=37.8
Q ss_pred cCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecC----CCCCeEEEEECCCCCEEEE
Q 033677 16 VPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPR----FSNSVASLSYNHGGQLLAV 75 (114)
Q Consensus 16 ~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~----~~~~v~~v~fspdg~~la~ 75 (114)
..|.++...+ ++.+++....+| +..||.++++. ..+.. ....|.++...++|.+.+.
T Consensus 495 ~~i~~i~~d~-~g~lWigt~~~G-l~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi~ 555 (781)
T 3v9f_A 495 NFVRSIAQDS-EGRFWIGTFGGG-VGIYTPDMQLV-RKFNQYEGFCSNTINQIYRSSKGQMWLA 555 (781)
T ss_dssp SCEEEEEECT-TCCEEEEESSSC-EEEECTTCCEE-EEECTTTTCSCSCEEEEEECTTSCEEEE
T ss_pred ceeEEEEEcC-CCCEEEEEcCCC-EEEEeCCCCeE-EEccCCCCCCCCeeEEEEECCCCCEEEE
Confidence 4588999988 776655443345 67788876653 33321 1356889999999986654
No 330
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=29.70 E-value=1.7e+02 Score=21.76 Aligned_cols=72 Identities=7% Similarity=0.157 Sum_probs=47.5
Q ss_pred EEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEEeCC---CcccccccCCCCcEEEE
Q 033677 20 DVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVASSC---TYQEATVIEEPPQIFII 96 (114)
Q Consensus 20 ~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~s~d---~~~~~~~~~~~~~i~i~ 96 (114)
+.-.|| ....|+--. ...++++|+++...++.+.- ..+|.-=+|-. .+.||..+.. -|+... ...|..+|=|
T Consensus 71 sAIMnP-~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis-~~~L~lVT~taVyHWs~~~-~s~P~kvFdR 145 (365)
T 2xzh_A 71 SAIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWIS-LNTVALVTDNAVYHWSMEG-ESQPVKMFDR 145 (365)
T ss_dssp EEEECS-SSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECS-SSEEEEEESSEEEEEESST-TCCCEEEEEC
T ss_pred eeeeCC-CccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecC-CCeEEEEcCCcEEEEcccC-CCCCceeeec
Confidence 456799 777776655 67999999999998887764 45676667743 3466666654 686432 2344444444
No 331
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=29.28 E-value=2.2e+02 Score=22.74 Aligned_cols=60 Identities=10% Similarity=0.119 Sum_probs=35.5
Q ss_pred ecCeEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecC------------CCCCeEEEEECCC--CCEEEE
Q 033677 15 LVPVNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPR------------FSNSVASLSYNHG--GQLLAV 75 (114)
Q Consensus 15 ~~~V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~------------~~~~v~~v~fspd--g~~la~ 75 (114)
...|.+|+++|.+.+.++.+...|.|...+ +.++.-..+.. ....+.+|++.|. +.++|.
T Consensus 20 ~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~-DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~ 93 (763)
T 3a0f_A 20 GGFISGLVAHPTEKDLIYARTDIGGTYRWN-AAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLA 93 (763)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEE
T ss_pred CCceeEEEeCCCCCCEEEEEeccCcEEEEC-CCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEE
Confidence 346899999994447777777667655443 23333222221 1235889999883 344443
No 332
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=28.89 E-value=2.4e+02 Score=24.08 Aligned_cols=63 Identities=13% Similarity=-0.100 Sum_probs=39.5
Q ss_pred cCeEEEEECCCC------CCEEEEEeC-CCcEEEEeCCCCeeeEEecC-CCCCeEEEEECC--CCCEEEEEeCC
Q 033677 16 VPVNDVVFSPLS------RGAFVTGDN-EGYVAAWDAQSRRRLFELPR-FSNSVASLSYNH--GGQLLAVASSC 79 (114)
Q Consensus 16 ~~V~~v~f~p~~------~~~~~t~s~-Dg~I~iwD~~~~~~~~~~~~-~~~~v~~v~fsp--dg~~la~~s~d 79 (114)
..|.++++.| . ...++.|.. |++++++++.+.+.+..... ....+.++.+.. ..-+|.+|..|
T Consensus 554 ~evscl~i~~-~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~d 626 (1158)
T 3ei3_A 554 HEVACLDITP-LGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGD 626 (1158)
T ss_dssp SCEEEEECCC-CSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETT
T ss_pred CceEEEEeec-CCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCC
Confidence 3588999886 3 258888886 99999999987665543321 122444554432 22356666655
No 333
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=28.47 E-value=1.5e+02 Score=23.13 Aligned_cols=57 Identities=26% Similarity=0.334 Sum_probs=0.0
Q ss_pred eEEEEECCCCCCEEEEEeCCCcEEEEeCCCCeeeEEecCCCCCeEEEEECCCCCEEEEE
Q 033677 18 VNDVVFSPLSRGAFVTGDNEGYVAAWDAQSRRRLFELPRFSNSVASLSYNHGGQLLAVA 76 (114)
Q Consensus 18 V~~v~f~p~~~~~~~t~s~Dg~I~iwD~~~~~~~~~~~~~~~~v~~v~fspdg~~la~~ 76 (114)
|.++...+ ++..|..|. ++-+..+|..+++...........|.++...++|.+.+..
T Consensus 193 i~~i~~d~-~~~~lWigt-~~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT 249 (758)
T 3ott_A 193 VNSLLEDT-TRQCVWIGT-EGYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGT 249 (758)
T ss_dssp EEEEEEET-TTTEEEEEE-EEEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEE
T ss_pred eEEEEEEC-CCCEEEEEE-CCCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEe
No 334
>1f35_A Olfactory marker protein; beta, structural genomics, PSI, protein structure initiative northeast structural genomics consortium, NESG, signaling P; 2.30A {Mus musculus} SCOP: b.94.1.1 PDB: 1job_A 1jod_A 1jyt_A 1zri_A
Probab=27.66 E-value=1.2e+02 Score=19.40 Aligned_cols=40 Identities=15% Similarity=0.243 Sum_probs=31.5
Q ss_pred EEEEECCCCCEEEEEeCCCcc------cccccCCCCcEEEEEcCcc
Q 033677 62 ASLSYNHGGQLLAVASSCTYQ------EATVIEEPPQIFIIRIDDI 101 (114)
Q Consensus 62 ~~v~fspdg~~la~~s~d~~~------~~~~~~~~~~i~i~~~~~~ 101 (114)
..|.+...|+.-.+|.+..|. ...++..|..+|-++..++
T Consensus 67 W~v~l~~pGkvtitgtsQ~WTPDLT~LMTRQlLeP~~~Fwr~~~~~ 112 (162)
T 1f35_A 67 WNVVLDKPGKVTITGTSQNWTPDLTNLMTRQLLDPAAIFWRKEDSD 112 (162)
T ss_dssp EEEEESSSEEEEEEEBCTTCCTTTCCCBGGGBCSSCEEEEECTTCC
T ss_pred EEEEEcCCCeEEEEeeccccCcchHHHHHhcccchhhhhhhcccCC
Confidence 467778889999999999885 3345689999999987554
No 335
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=25.67 E-value=43 Score=26.88 Aligned_cols=40 Identities=8% Similarity=0.125 Sum_probs=27.5
Q ss_pred cEEEEeCCC----CeeeEEecCCCCCeEEEEECCCCCEEEEEeC
Q 033677 39 YVAAWDAQS----RRRLFELPRFSNSVASLSYNHGGQLLAVASS 78 (114)
Q Consensus 39 ~I~iwD~~~----~~~~~~~~~~~~~v~~v~fspdg~~la~~s~ 78 (114)
.+.+-|.+. +..+..+...+.....+.++|||+++.++..
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GK 342 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGK 342 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECT
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCC
Confidence 356777765 3333334445667789999999999987664
No 336
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=25.57 E-value=2.3e+02 Score=21.71 Aligned_cols=51 Identities=18% Similarity=0.214 Sum_probs=33.3
Q ss_pred CEEEEEeCCCcEEEEeCC-CC-------eeeEEec--CCCCCeEEEEECCCCCEEEEEeCC
Q 033677 29 GAFVTGDNEGYVAAWDAQ-SR-------RRLFELP--RFSNSVASLSYNHGGQLLAVASSC 79 (114)
Q Consensus 29 ~~~~t~s~Dg~I~iwD~~-~~-------~~~~~~~--~~~~~v~~v~fspdg~~la~~s~d 79 (114)
..+..|..+|.|.-.-+. .+ ..+..++ ....+|..|.++++..+|.+++..
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~ 482 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTA 482 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSS
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECC
Confidence 467889999977643222 11 1222333 245789999999999988888765
No 337
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=25.11 E-value=2.6e+02 Score=22.32 Aligned_cols=60 Identities=12% Similarity=0.071 Sum_probs=35.9
Q ss_pred CeEEEEECCCCCCEEEEEeCCC--cEEEEeCCCCe-eeEE-ecCC-CCCeEEEEECCCCC-EEEEEeC
Q 033677 17 PVNDVVFSPLSRGAFVTGDNEG--YVAAWDAQSRR-RLFE-LPRF-SNSVASLSYNHGGQ-LLAVASS 78 (114)
Q Consensus 17 ~V~~v~f~p~~~~~~~t~s~Dg--~I~iwD~~~~~-~~~~-~~~~-~~~v~~v~fspdg~-~la~~s~ 78 (114)
.+..+.+.+ + .++++...++ .+.++|+.++. .... +... ...+..+.+++++. ++.+.++
T Consensus 351 ~l~~~~~~~-~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss 416 (711)
T 4hvt_A 351 VFNFISTTK-D-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIEN 416 (711)
T ss_dssp EEEEEEECS-S-CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEEC
T ss_pred eEEEEEEEC-C-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEec
Confidence 366788887 4 5777777777 46677776664 2233 2211 34677777777765 4444443
No 338
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=23.52 E-value=1.5e+02 Score=23.05 Aligned_cols=62 Identities=11% Similarity=0.116 Sum_probs=37.6
Q ss_pred eEEEEECCC-CCCEEEEEeCCCcEEEEeCCCC----eeeEEec--CCCCCeE-EEEECCCCCEEEEEeCC
Q 033677 18 VNDVVFSPL-SRGAFVTGDNEGYVAAWDAQSR----RRLFELP--RFSNSVA-SLSYNHGGQLLAVASSC 79 (114)
Q Consensus 18 V~~v~f~p~-~~~~~~t~s~Dg~I~iwD~~~~----~~~~~~~--~~~~~v~-~v~fspdg~~la~~s~d 79 (114)
++.|+.... +...+..|..+|.|.-.-+... ..+..+. ....+|. .|.+++++..|.+++..
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~ 471 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSER 471 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSS
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecc
Confidence 444554431 2246788999997765444322 1222332 2356785 89999999888888754
No 339
>2wl1_A Pyrin, marenostrin; amyloidosis, polymorphism, cytoskeleton, actin-binding inflammatory response, metal-binding, signaling protein; 1.35A {Homo sapiens}
Probab=20.79 E-value=1.9e+02 Score=19.01 Aligned_cols=22 Identities=9% Similarity=0.375 Sum_probs=16.4
Q ss_pred eCCCcEEEEeCCCCeeeEEecC
Q 033677 35 DNEGYVAAWDAQSRRRLFELPR 56 (114)
Q Consensus 35 s~Dg~I~iwD~~~~~~~~~~~~ 56 (114)
.+.|.|.+||+.++..++++..
T Consensus 139 ye~G~lSFY~v~~~~~i~tF~~ 160 (191)
T 2wl1_A 139 YRVGSISFYNVTARSHIYTFAS 160 (191)
T ss_dssp TTTTEEEEEETTTTEEEEEECC
T ss_pred cCCCEEEEEECCCCcceEEeCC
Confidence 3467888888887777777764
No 340
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=20.13 E-value=61 Score=23.62 Aligned_cols=27 Identities=7% Similarity=0.005 Sum_probs=24.2
Q ss_pred CEEEEEeCCCcEEEEeCCCCeeeEEec
Q 033677 29 GAFVTGDNEGYVAAWDAQSRRRLFELP 55 (114)
Q Consensus 29 ~~~~t~s~Dg~I~iwD~~~~~~~~~~~ 55 (114)
..+++|+.+|.+...|+++++.+.++.
T Consensus 112 g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 112 EKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp EEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred CEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 578899999999999999999888875
Done!