BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033683
(113 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P86397|HTD2_HUMAN Hydroxyacyl-thioester dehydratase type 2, mitochondrial OS=Homo
sapiens GN=RPP14 PE=1 SV=1
Length = 168
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 14 LRYFSSLEPRILKTGDILRQTRIFSSEDVVEYSKVSHDSNPLHFNSESARNAGFDDRLVH 73
L++F + +K GD R F+ DV +S+++ D NPLH N + A++ F + +VH
Sbjct: 28 LQHFQHMH---IKVGDRAELRRAFTQTDVATFSELTGDVNPLHLNEDFAKHTKFGNTIVH 84
Query: 74 GMLVASMFPQIISSHFVSPTVSF-SFFSSFP 103
G+L+ + ++ + P F S SFP
Sbjct: 85 GVLINGLISALLGTKMPGPGCVFLSQEISFP 115
>sp|O32472|PHAJ_AERPU (R)-specific enoyl-CoA hydratase OS=Aeromonas punctata GN=phaJ
PE=1 SV=1
Length = 134
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 25 LKTGDILRQTRIFSSEDVVEYSKVSHDSNPLHFNSESARNAGFDDRLVHGMLVASMFPQI 84
L+ G R ++ F + +V ++ +S D NPLH + A F+ +VHGML+AS+F +
Sbjct: 6 LEVGQKARLSKRFGAAEVAAFAALSEDFNPLHLDPAFAATTAFERPIVHGMLLASLFSGL 65
Query: 85 ISSHF 89
+
Sbjct: 66 LGQQL 70
>sp|P77455|PAAZ_ECOLI Bifunctional protein PaaZ OS=Escherichia coli (strain K12) GN=paaZ
PE=1 SV=1
Length = 681
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 12 PLLRYFSSLEPRILKTGD-ILRQTRIFSSEDVVEYSKVSHDSNPLHFNSESARNAGFDDR 70
P +YF L+P GD +L R + D+V ++ +S D H + +A + F +R
Sbjct: 526 PFRKYFEELQP-----GDSLLTPRRTMTEADIVNFACLSGDHFYAHMDKIAAAESIFGER 580
Query: 71 LVHGMLVASMFPQIISSHFVSPTVS 95
+VHG V S + V P ++
Sbjct: 581 VVHGYFVLSAAAGLFVDAGVGPVIA 605
>sp|P22414|FOX2_CANTR Peroxisomal hydratase-dehydrogenase-epimerase OS=Candida tropicalis
PE=1 SV=2
Length = 906
Score = 36.2 bits (82), Expect = 0.067, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 33 QTRIFSSEDVVEYSKVSHDSNPLHFNSESARNAGFDDRLVHGM 75
Q + SED+ ++S D NPLH + A+ A F ++HGM
Sbjct: 790 QVDVPVSEDLAALYRLSGDRNPLHIDPNFAKGAKFPKPILHGM 832
>sp|Q9VXJ0|DHB4_DROME Peroxisomal multifunctional enzyme type 2 OS=Drosophila
melanogaster GN=Mfe2 PE=1 SV=1
Length = 598
Score = 35.0 bits (79), Expect = 0.12, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 38 SSEDVVEYSKVSHDSNPLHFNSESARNAGFDDRLVHGM 75
+SED ++S D NPLH + + A AGF ++HG+
Sbjct: 483 TSEDQAALYRLSGDKNPLHIDPQMALLAGFKTPILHGL 520
>sp|P49251|MAOC_ENTAE Protein MaoC OS=Enterobacter aerogenes GN=maoC PE=3 SV=2
Length = 335
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 12 PLLRYFSSLEPRILKTGD-ILRQTRIFSSEDVVEYSKVSHDSNPLHFNSESARNAGFDDR 70
P +YF ++P GD +L R + D+V ++ +S D H + +A + F +R
Sbjct: 193 PFRKYFEEIQP-----GDSLLTPRRTLTEADIVNFACLSGDHFYAHMDKIAAAESIFGER 247
Query: 71 LVHGMLVASMFPQIISSHFVSPTVS 95
+VHG + S + V P ++
Sbjct: 248 VVHGYFLISAAAGLFVDAGVRPVIA 272
>sp|P97852|DHB4_RAT Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus
GN=Hsd17b4 PE=1 SV=3
Length = 735
Score = 34.3 bits (77), Expect = 0.24, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 30 ILRQTRIFSSEDVVEYSKVSHDSNPLHFNSESARNAGFDDRLVHGMLVASMFPQIISSHF 89
+LR T +S + ++S DSNPLH + A AGF+ ++HG+ + + F
Sbjct: 491 VLRDT---TSLNQAALYRLSGDSNPLHIDPSFASIAGFEKPILHGLCTFGFSARHVLQQF 547
Query: 90 VSPTVS 95
VS
Sbjct: 548 ADNDVS 553
>sp|Q54XZ0|MFEB_DICDI Probable enoyl-CoA hydratase 2 OS=Dictyostelium discoideum GN=mfeB
PE=2 SV=1
Length = 294
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 38 SSEDVVEYSKVSHDSNPLHFNSESARNAGFDDRLVHGMLVASMFPQIISSHF 89
S + V Y D NPLH + E ++ GF+ ++HG+ + + + HF
Sbjct: 177 SEDQAVIYRLAGGDLNPLHIDPEMSKIGGFEVPILHGLCTYGIASRGVLEHF 228
>sp|P51659|DHB4_HUMAN Peroxisomal multifunctional enzyme type 2 OS=Homo sapiens
GN=HSD17B4 PE=1 SV=3
Length = 736
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 47 KVSHDSNPLHFNSESARNAGFDDRLVHGMLVASMFPQIISSHFVSPTVS 95
++S D NPLH + A AGFD ++HG+ + + F VS
Sbjct: 506 RLSGDWNPLHIDPNFASLAGFDKPILHGLCTFGFSARRVLQQFADNDVS 554
>sp|Q00706|STCK_EMENI Putative sterigmatocystin biosynthesis fatty acid synthase subunit
beta OS=Emericella nidulans (strain FGSC A4 / ATCC 38163
/ CBS 112.46 / NRRL 194 / M139) GN=stcK PE=3 SV=2
Length = 1914
Score = 32.7 bits (73), Expect = 0.68, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 22 PRILKTGDILRQTRIFSSEDVVEYSKVSHDSNPLHFNSESARNAGFDDRLVHGMLVASMF 81
PR TGD + Y+ VS D+NP+H +R AG +VHG+ +++
Sbjct: 1413 PRAGWTGDDAASISFTAPAQSEGYAMVSGDTNPIHVCPLFSRFAGLGQPVVHGLHLSATV 1472
Query: 82 PQII 85
+I+
Sbjct: 1473 RRIL 1476
>sp|P51660|DHB4_MOUSE Peroxisomal multifunctional enzyme type 2 OS=Mus musculus
GN=Hsd17b4 PE=1 SV=3
Length = 735
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 47 KVSHDSNPLHFNSESARNAGFDDRLVHGMLVASMFPQIISSHFVSPTVS 95
++S D NPLH + + A AGF+ ++HG+ + + F VS
Sbjct: 505 RLSGDWNPLHIDPDFASVAGFEKPILHGLCTFGFSARHVLQQFADNDVS 553
>sp|Q8GUI6|JMJ14_ARATH Probable lysine-specific demethylase JMJ14 OS=Arabidopsis thaliana
GN=JMJ14 PE=1 SV=1
Length = 954
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 5 NLLSTKPPLL-RYFSSLEPRILKT-GDILRQTRIFSSEDVVEYSKVSHDSNPLHFNSESA 62
+L +P LL + + L PRILK G + + S E ++ + K H FN A
Sbjct: 350 DLFEEQPDLLHQLVTQLSPRILKEEGVPVYRAVQRSGEFILTFPKAYHSGFNCGFNCAEA 409
Query: 63 RNAGFDDRLVHG 74
N D LVHG
Sbjct: 410 VNVAPVDWLVHG 421
>sp|Q8VYI3|ECH2_ARATH Enoyl-CoA hydratase 2, peroxisomal OS=Arabidopsis thaliana GN=ECH2
PE=1 SV=1
Length = 309
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 47 KVSHDSNPLHFNSESARNAGFDDRLVHGM 75
++S D NPLH + E A+ AGF ++HG+
Sbjct: 204 RLSGDYNPLHSDPEFAKLAGFPRPILHGL 232
>sp|Q05FK4|RS4_CARRP 30S ribosomal protein S4 OS=Carsonella ruddii (strain PV) GN=rpsD
PE=3 SV=1
Length = 197
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 6 LLSTKPPLLRYFSSLEPRILKTGDILRQTRIFSSEDVVEYSKVSHDSNPLHFNSESARNA 65
+L TK + RY+ E K I+++ F++ D++ + + D+ FN +R
Sbjct: 53 ILRTKQKIKRYYCIFEKEFKKIYFIIKKN-FFNNIDLINFLERRLDNVIYRFNFSISRKE 111
Query: 66 GFDDRLVHGMLVASMFPQIISSHFVSP 92
++HG + + F I S+ +SP
Sbjct: 112 S-RQLIIHGNVFVNYFKNKIPSYLLSP 137
>sp|Q03587|RPOB_THEAC DNA-directed RNA polymerase subunit B OS=Thermoplasma acidophilum
(strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 /
AMRC-C165) GN=rpoB PE=3 SV=1
Length = 1195
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 40 EDVVEYSKVSHDSNPLHFNSESARNAGFDDRLVHG 74
+ +V+ +KVS D++P +F + A+ G D R+ +G
Sbjct: 37 QQIVDETKVSDDADPGYFVLDPAKTGGHDIRIYYG 71
>sp|Q02207|FOX2_YEAST Peroxisomal hydratase-dehydrogenase-epimerase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=FOX2 PE=1
SV=1
Length = 900
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 28/57 (49%)
Query: 33 QTRIFSSEDVVEYSKVSHDSNPLHFNSESARNAGFDDRLVHGMLVASMFPQIISSHF 89
+ I +++D ++S D NPLH + A+ F ++HG+ + + + H+
Sbjct: 785 EAEISTNKDQAALYRLSGDFNPLHIDPTLAKAVKFPTPILHGLCTLGISAKALFEHY 841
>sp|Q9RTF6|DGT1B_DEIRA Deoxyguanosinetriphosphate triphosphohydrolase-like protein 2
OS=Deinococcus radiodurans (strain ATCC 13939 / DSM
20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 /
R1 / VKM B-1422) GN=DR_1808 PE=3 SV=1
Length = 433
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 35 RIFSSEDVVEYSKVSHDSNPLH 56
+IF SEDV E+ K+ + PLH
Sbjct: 210 KIFCSEDVTEFKKLDYKCKPLH 231
>sp|Q92215|TOXC_COCCA Putative fatty acid synthase subunit TOXC OS=Cochliobolus carbonum
GN=TOXC PE=3 SV=1
Length = 2080
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 45 YSKVSHDSNPLHFNSESARNAGFDDRLVHGMLVASMFPQIIS 86
Y++ S D NP+H + A AG + HGM ++ ++
Sbjct: 1571 YARTSGDLNPIHVSRTFAEYAGLPGLITHGMYCSAAIQDLVE 1612
>sp|P07149|FAS1_YEAST Fatty acid synthase subunit beta OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=FAS1 PE=1 SV=2
Length = 2051
Score = 29.3 bits (64), Expect = 7.9, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 45 YSKVSHDSNPLHFNSESARNAGFDDRLVHGMLVASMFPQIISS 87
Y++VS D NP+H + A A + HGM ++ +I +
Sbjct: 1553 YARVSGDLNPIHVSRHFASYANLPGTITHGMFSSASVRALIEN 1595
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.138 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,480,958
Number of Sequences: 539616
Number of extensions: 1266756
Number of successful extensions: 3973
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3954
Number of HSP's gapped (non-prelim): 25
length of query: 113
length of database: 191,569,459
effective HSP length: 81
effective length of query: 32
effective length of database: 147,860,563
effective search space: 4731538016
effective search space used: 4731538016
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)