BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033684
(113 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q22799|DYL1_CAEEL Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans
GN=dlc-1 PE=1 SV=1
Length = 89
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 59/91 (64%), Gaps = 2/91 (2%)
Query: 1 MLEGKPVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVV 60
M++ K V++ DM D++Q ++ A QAL+ + + + IA YIK++FD+ Y P WHC+V
Sbjct: 1 MVDRKAVIKNADMSDDMQQDAIDCATQALEKYNIE--KDIAAYIKKEFDKKYNPTWHCIV 58
Query: 61 GKDFGSCITHLCGSLIFFRMEMMEFLVFKDG 91
G++FGS +TH I+F + + L+FK G
Sbjct: 59 GRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|O02414|DYL1_HELCR Dynein light chain LC6, flagellar outer arm OS=Heliocidaris
crassispina PE=3 SV=1
Length = 89
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 1 MLEGKPVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVV 60
M E K V++ DMP+++Q ++ A QAL+ + + IA YIK++FD+ Y P WHC+V
Sbjct: 1 MSERKAVIKNADMPEDMQQDAVDCATQALEKFNIE--KDIAAYIKKEFDKKYNPTWHCIV 58
Query: 61 GKDFGSCITHLCGSLIFFRMEMMEFLVFKDG 91
G++FGS +TH I+F + + L+FK G
Sbjct: 59 GRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89
>sp|Q94748|DYL2_SCHMA Probable dynein light chain OS=Schistosoma mansoni PE=3 SV=1
Length = 89
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Query: 1 MLEGKPVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVV 60
M E K V++ DM +++Q + A ALD +E+ + +A YIK++FD Y P WHC+V
Sbjct: 1 MGERKAVIKNADMHEDMQETAVHTAAAALDKYEIE--KDVAAYIKKEFDRKYNPNWHCIV 58
Query: 61 GKDFGSCITHLCGSLIFFRMEMMEFLVFKDG 91
GK FGS +TH I+F ++ FL+FK G
Sbjct: 59 GKHFGSYVTHETQHFIYFYLQERAFLLFKSG 89
>sp|Q24117|DYL1_DROME Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster
GN=ctp PE=1 SV=1
Length = 89
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 1 MLEGKPVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVV 60
M + K V++ DM +E+Q ++ A QAL+ + + + IA YIK++FD+ Y P WHC+V
Sbjct: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIE--KDIAAYIKKEFDKKYNPTWHCIV 58
Query: 61 GKDFGSCITHLCGSLIFFRMEMMEFLVFKDG 91
G++FGS +TH I+F + + L+FK G
Sbjct: 59 GRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89
>sp|Q94758|DYL1_SCHMA Dynein light chain OS=Schistosoma mansoni GN=DLC PE=1 SV=1
Length = 89
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Query: 1 MLEGKPVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVV 60
M E K V++ DM +E+Q + +A A+D H++ + IA IK+ FD Y P WHC+V
Sbjct: 1 MSERKAVIKNADMSEEMQEDAIHIAAGAIDKHDLE--KDIAANIKKDFDRKYHPTWHCIV 58
Query: 61 GKDFGSCITHLCGSLIFFRMEMMEFLVFKDG 91
G+ FGS +TH + I+F ++ FL+FK G
Sbjct: 59 GRHFGSYVTHETHNFIYFYLDDRAFLLFKSG 89
>sp|P63170|DYL1_RAT Dynein light chain 1, cytoplasmic OS=Rattus norvegicus GN=Dynll1
PE=1 SV=1
Length = 89
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 1 MLEGKPVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVV 60
M + K V++ DM +E+Q +E A QAL+ + + + IA +IK++FD+ Y P WHC+V
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIE--KDIAAHIKKEFDKKYNPTWHCIV 58
Query: 61 GKDFGSCITHLCGSLIFFRMEMMEFLVFKDG 91
G++FGS +TH I+F + + L+FK G
Sbjct: 59 GRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|P63169|DYL1_RABIT Dynein light chain 1, cytoplasmic OS=Oryctolagus cuniculus
GN=DYNLL1 PE=1 SV=1
Length = 89
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 1 MLEGKPVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVV 60
M + K V++ DM +E+Q +E A QAL+ + + + IA +IK++FD+ Y P WHC+V
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIE--KDIAAHIKKEFDKKYNPTWHCIV 58
Query: 61 GKDFGSCITHLCGSLIFFRMEMMEFLVFKDG 91
G++FGS +TH I+F + + L+FK G
Sbjct: 59 GRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|P63168|DYL1_MOUSE Dynein light chain 1, cytoplasmic OS=Mus musculus GN=Dynll1 PE=1
SV=1
Length = 89
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 1 MLEGKPVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVV 60
M + K V++ DM +E+Q +E A QAL+ + + + IA +IK++FD+ Y P WHC+V
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIE--KDIAAHIKKEFDKKYNPTWHCIV 58
Query: 61 GKDFGSCITHLCGSLIFFRMEMMEFLVFKDG 91
G++FGS +TH I+F + + L+FK G
Sbjct: 59 GRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|P61273|DYL1_MACFA Dynein light chain 1, cytoplasmic OS=Macaca fascicularis
GN=DYNLL1 PE=3 SV=1
Length = 89
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 1 MLEGKPVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVV 60
M + K V++ DM +E+Q +E A QAL+ + + + IA +IK++FD+ Y P WHC+V
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIE--KDIAAHIKKEFDKKYNPTWHCIV 58
Query: 61 GKDFGSCITHLCGSLIFFRMEMMEFLVFKDG 91
G++FGS +TH I+F + + L+FK G
Sbjct: 59 GRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|P63167|DYL1_HUMAN Dynein light chain 1, cytoplasmic OS=Homo sapiens GN=DYNLL1 PE=1
SV=1
Length = 89
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 1 MLEGKPVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVV 60
M + K V++ DM +E+Q +E A QAL+ + + + IA +IK++FD+ Y P WHC+V
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIE--KDIAAHIKKEFDKKYNPTWHCIV 58
Query: 61 GKDFGSCITHLCGSLIFFRMEMMEFLVFKDG 91
G++FGS +TH I+F + + L+FK G
Sbjct: 59 GRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|P61285|DYL1_BOVIN Dynein light chain 1, cytoplasmic OS=Bos taurus GN=DYNLL1 PE=1
SV=1
Length = 89
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 1 MLEGKPVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVV 60
M + K V++ DM +E+Q +E A QAL+ + + + IA +IK++FD+ Y P WHC+V
Sbjct: 1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIE--KDIAAHIKKEFDKKYNPTWHCIV 58
Query: 61 GKDFGSCITHLCGSLIFFRMEMMEFLVFKDG 91
G++FGS +TH I+F + + L+FK G
Sbjct: 59 GRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|O96860|DYL2_DROME Dynein light chain 2, cytoplasmic OS=Drosophila melanogaster
GN=Cdlc2 PE=3 SV=1
Length = 89
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 1 MLEGKPVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVV 60
M + K V++ DM +E+Q ++ A QAL+ + + + IA +IK++FD+ Y P WHC+V
Sbjct: 1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIE--KDIAAFIKKEFDKKYNPTWHCIV 58
Query: 61 GKDFGSCITHLCGSLIFFRMEMMEFLVFKDG 91
G++FGS +TH I+F + + L+FK G
Sbjct: 59 GRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89
>sp|Q78P75|DYL2_RAT Dynein light chain 2, cytoplasmic OS=Rattus norvegicus GN=Dynll2
PE=1 SV=1
Length = 89
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 1 MLEGKPVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVV 60
M + K V++ DM +++Q ++ A QA++ + + + IA YIK++FD+ Y P WHC+V
Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIE--KDIAAYIKKEFDKKYNPTWHCIV 58
Query: 61 GKDFGSCITHLCGSLIFFRMEMMEFLVFKDG 91
G++FGS +TH I+F + + L+FK G
Sbjct: 59 GRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|Q9D0M5|DYL2_MOUSE Dynein light chain 2, cytoplasmic OS=Mus musculus GN=Dynll2 PE=1
SV=1
Length = 89
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 1 MLEGKPVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVV 60
M + K V++ DM +++Q ++ A QA++ + + + IA YIK++FD+ Y P WHC+V
Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIE--KDIAAYIKKEFDKKYNPTWHCIV 58
Query: 61 GKDFGSCITHLCGSLIFFRMEMMEFLVFKDG 91
G++FGS +TH I+F + + L+FK G
Sbjct: 59 GRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|Q96FJ2|DYL2_HUMAN Dynein light chain 2, cytoplasmic OS=Homo sapiens GN=DYNLL2 PE=1
SV=1
Length = 89
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 1 MLEGKPVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVV 60
M + K V++ DM +++Q ++ A QA++ + + + IA YIK++FD+ Y P WHC+V
Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIE--KDIAAYIKKEFDKKYNPTWHCIV 58
Query: 61 GKDFGSCITHLCGSLIFFRMEMMEFLVFKDG 91
G++FGS +TH I+F + + L+FK G
Sbjct: 59 GRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|Q3MHR3|DYL2_BOVIN Dynein light chain 2, cytoplasmic OS=Bos taurus GN=DYNLL2 PE=3
SV=1
Length = 89
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 1 MLEGKPVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVV 60
M + K V++ DM +++Q ++ A QA++ + + + IA YIK++FD+ Y P WHC+V
Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIE--KDIAAYIKKEFDKKYNPTWHCIV 58
Query: 61 GKDFGSCITHLCGSLIFFRMEMMEFLVFKDG 91
G++FGS +TH I+F + + L+FK G
Sbjct: 59 GRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|Q39580|DYL1_CHLRE Dynein 8 kDa light chain, flagellar outer arm OS=Chlamydomonas
reinhardtii PE=1 SV=1
Length = 91
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 5 KPVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVVGKDF 64
K V++ DM +E+Q+ ++ A QAL+ + + + IA YIK++FD + P WHC+VG++F
Sbjct: 7 KAVIKNADMSEEMQADAVDCATQALEKYNIE--KDIAAYIKKEFDRKHNPTWHCIVGRNF 64
Query: 65 GSCITHLCGSLIFFRMEMMEFLVFKDG 91
GS +TH I+F + + L+FK G
Sbjct: 65 GSYVTHETKHFIYFYLGQVAILLFKSG 91
>sp|Q6BZF8|DYL1_DEBHA Dynein light chain 1, cytoplasmic OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=DYN2 PE=3 SV=1
Length = 91
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
Query: 3 EGKPVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVVGK 62
E +P+++ +D+P+E+Q+ + EL+ +A+ +++ + IA Y+K++ D+ Y WH +VGK
Sbjct: 5 EQEPILKASDLPEEMQTRIFELSNEAVSNYKIE--KDIATYLKKELDQLYGATWHVIVGK 62
Query: 63 DFGSCITHLCGSLIFFRMEMMEFLVFKDG 91
FGS +TH G +F + + FL+FK G
Sbjct: 63 SFGSYVTHEQGFFTYFYIGQLAFLIFKSG 91
>sp|Q9UR05|DYL1_SCHPO Dynein light chain 1, cytoplasmic OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dlc2 PE=3 SV=1
Length = 85
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 6 PVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVVGKDFG 65
V++ DM +++Q + A QA++ + + IA +IK++FD+ + P WHC+VG++FG
Sbjct: 2 AVIKAVDMSEKMQQEAIHAAVQAMEKFTIE--KDIAAFIKREFDKKFSPTWHCIVGRNFG 59
Query: 66 SCITHLCGSLIFFRMEMMEFLVFKDG 91
S +TH I+F + + FL+FK G
Sbjct: 60 SFVTHESRHFIYFYLGTVAFLLFKSG 85
>sp|Q86A88|DYL_DICDI Dynein light chain, cytoplasmic OS=Dictyostelium discoideum
GN=dlcB PE=3 SV=1
Length = 91
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 8 VQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVVGKDFGSC 67
V+ DMPD +Q E +A + E + + IA IK++FD+ Y P WHC+VGK FGS
Sbjct: 10 VKNADMPDFMQQDATECTIKAFE--ETNIERDIAMIIKKEFDKKYSPTWHCIVGKSFGSF 67
Query: 68 ITHLCGSLIFFRMEMMEFLVFKDG 91
+TH + I+F + L+FK G
Sbjct: 68 VTHETKNFIYFNINKHSVLLFKAG 91
>sp|Q6CWX4|DYL1_KLULA Dynein light chain 1, cytoplasmic OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DYN2 PE=3 SV=1
Length = 87
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 5 KPVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVVGKDF 64
KPV++ +D+ DEL+ + EL+ A +++ + IA YIK++ D + WH +VGK+F
Sbjct: 3 KPVLKASDITDELRDEIFELSSNATANYKLE--REIAAYIKKQLDVSQGETWHVIVGKNF 60
Query: 65 GSCITHLCGSLIFFRMEMMEFLVFK 89
GS +TH G ++F + + FLVFK
Sbjct: 61 GSYVTHEKGYFVYFYIGPLAFLVFK 85
>sp|Q02647|DYL1_YEAST Dynein light chain 1, cytoplasmic OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DYN2 PE=1 SV=1
Length = 92
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 6 PVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVVGKDFG 65
P+V+ +D+ D+L+ ++ ++ ALD +++ + IA +K++ D Y WH +VGK+FG
Sbjct: 9 PIVKASDITDKLKEDILTISKDALDKYQLE--RDIAGTVKKQLDVKYGNTWHVIVGKNFG 66
Query: 66 SCITHLCGSLIFFRMEMMEFLVFK 89
S +TH G ++F + + FLVFK
Sbjct: 67 SYVTHEKGHFVYFYIGPLAFLVFK 90
>sp|O94111|DYL1_EMENI Dynein light chain, cytoplasmic OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=nudG PE=3 SV=1
Length = 94
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 6 PVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVVGKDFG 65
P ++ DM +++Q +E+A +A++ + + + IA YIK++FD WHCVVG++FG
Sbjct: 11 PQIKSVDMSEDMQQEAVEVAIEAMEKYHIE--KDIAQYIKREFDSRKGATWHCVVGRNFG 68
Query: 66 SCITHLCGSLIFFRMEMMEFLVFK 89
S +TH I+F + L+FK
Sbjct: 69 SFVTHETKHFIYFYLGHCAILLFK 92
>sp|Q759T0|DYL1_ASHGO Dynein light chain 1, cytoplasmic OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DYN2
PE=3 SV=1
Length = 88
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
Query: 5 KP-VVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVVGKD 63
KP +++ +D+ DEL+ + ++ QA++ ++ + +A YIK++ D + WH +VGK+
Sbjct: 3 KPAILKASDITDELRDEIFGISVQAVEQFQLE--REVAAYIKKELDSKHGQTWHVIVGKN 60
Query: 64 FGSCITHLCGSLIFFRMEMMEFLVFK 89
FGS +TH G I+F + + FLVFK
Sbjct: 61 FGSYVTHEKGHFIYFYIGPLAFLVFK 86
>sp|Q6FUJ0|DYL1_CANGA Dynein light chain 1, cytoplasmic OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DYN2 PE=3 SV=1
Length = 86
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 7 VVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVVGKDFGS 66
+V+ +DM DE+Q V +A +A+ H + + IA IK++ D Y WH +VG+ FGS
Sbjct: 5 IVKASDMGDEMQQEVFRIAEEAMREHTLE--REIASVIKKEMDSRYGHTWHVIVGRSFGS 62
Query: 67 CITHLCGSLIFFRMEMMEFLVFK 89
+TH G ++F + + LVFK
Sbjct: 63 YVTHEKGKFVYFYVGPLALLVFK 85
>sp|Q9DCM4|DNAL4_MOUSE Dynein light chain 4, axonemal OS=Mus musculus GN=Dnal4 PE=2 SV=2
Length = 105
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 2 LEGKPVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVVG 61
L+ P+V+ +DMP+E++ MEL A + ++ +S A IK+ D+ + +WH V+G
Sbjct: 16 LQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNN-ESAAKMIKETMDKKFGSSWHVVIG 74
Query: 62 KDFGSCITHLCGSLIFF 78
+ FG ITH +L++
Sbjct: 75 EGFGFEITHEVKNLLYL 91
>sp|A4F4L4|DNAL4_PIG Dynein light chain 4, axonemal OS=Sus scrofa GN=DNAL4 PE=3 SV=1
Length = 105
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 2 LEGKPVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVVG 61
L+ P+V+ +DMP+E++ MEL A + ++ +S A IK+ D+ + +WH V+G
Sbjct: 16 LQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNN-ESAAKMIKETMDKKFGSSWHVVIG 74
Query: 62 KDFGSCITHLCGSLIFF 78
+ FG ITH +L++
Sbjct: 75 EGFGFEITHEVKNLLYL 91
>sp|O96015|DNAL4_HUMAN Dynein light chain 4, axonemal OS=Homo sapiens GN=DNAL4 PE=2 SV=1
Length = 105
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 2 LEGKPVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVVG 61
L+ P+V+ +DMP+E++ MEL A + ++ +S A IK+ D+ + +WH V+G
Sbjct: 16 LQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNN-ESAAKMIKETMDKKFGSSWHVVIG 74
Query: 62 KDFGSCITHLCGSLIFF 78
+ FG ITH +L++
Sbjct: 75 EGFGFEITHEVKNLLYL 91
>sp|Q32KN5|DNAL4_BOVIN Dynein light chain 4, axonemal OS=Bos taurus GN=DNAL4 PE=3 SV=1
Length = 105
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 2 LEGKPVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVVG 61
L+ P+V+ +DMP+E++ MEL A + ++ +S A IK+ D+ + +WH V+G
Sbjct: 16 LQTFPLVRHSDMPEEMRVETMELCVTACEKFSNNN-ESAAKMIKETMDKKFGSSWHVVIG 74
Query: 62 KDFGSCITHLCGSLIFF 78
+ FG ITH +L++
Sbjct: 75 EGFGFEITHEVKNLLYL 91
>sp|Q21557|DYL2_CAEEL Probable dynein light chain 2, cytoplasmic OS=Caenorhabditis
elegans GN=dlc-2 PE=3 SV=2
Length = 90
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 1 MLEGKPVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAWHCVV 60
M E K V+ETDM D + V+ + +A L+ + + +A ++K++ D+ + WH +
Sbjct: 1 MSEEKIEVKETDMEDPQRDMVISVVREAQRLYNID--KDVAAFVKEELDKKFGATWHVIC 58
Query: 61 GKDFGSCITHLCGSLIFFRMEMMEFLVFKDG 91
GK FGS +++ G I + + +++K G
Sbjct: 59 GKCFGSRVSYEMGHFILLKCNKVNVMIYKCG 89
>sp|Q39579|DYL2_CHLRE Dynein 11 kDa light chain, flagellar outer arm OS=Chlamydomonas
reinhardtii PE=1 SV=1
Length = 120
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 13 MPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAY-------RPAWHCVVGKDFG 65
MP+ + +++A A+D + + IA YIK ++D+ Y +HC+VGK F
Sbjct: 28 MPESFEQDAVQIALIAVDKYR--QLKDIAFYIKHEYDKKYPGSGKATEGVYHCIVGKSFA 85
Query: 66 SCITHLCGSLIFFRMEMMEFLVFK 89
S ++H I +++ +++K
Sbjct: 86 SAVSHETRQFIHMKVDTYHVILWK 109
>sp|B4KNC5|FBSP1_DROMO F-box/SPRY domain-containing protein 1 OS=Drosophila mojavensis
GN=Fsn PE=3 SV=1
Length = 252
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/82 (21%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 20 HVMELAYQALDLHEVSDC----QSIAHYIKQKFDEAYRPAWHCVVGKDFGSCITHLCGSL 75
+V+E + L+L ++S C +S H++ + + +R WHC+ S + L S+
Sbjct: 9 NVLEAIFSYLELSDLSRCSQVCKSWYHFLNDENSDVWR--WHCLRKLPKESIKSDLLASV 66
Query: 76 IFFRMEMMEFLVFKDGKDCTES 97
++ ++ +L + DC+ +
Sbjct: 67 TTYKTKLRAYLHAWNPNDCSRN 88
>sp|B2J5B0|EFG_NOSP7 Elongation factor G OS=Nostoc punctiforme (strain ATCC 29133 / PCC
73102) GN=fusA PE=3 SV=1
Length = 692
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
Query: 8 VQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYI------KQKFDEAYRPAWHCVVG 61
+QETD+P+ELQ+ V E + ++ +D +A Y +Q+ A R G
Sbjct: 194 IQETDIPEELQAQVDEFRTKLIEAAAETDDALMAKYFEGEELTEQEIRTALRK------G 247
Query: 62 KDFGSCITHLCGS 74
G+ + LCGS
Sbjct: 248 TIAGTIVPVLCGS 260
>sp|Q22017|FLAD1_CAEEL Probable FAD synthase OS=Caenorhabditis elegans GN=R53.1 PE=3 SV=1
Length = 519
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 8 VQETDMPDELQSHVME---LAYQALDLHEVSDCQSIAHYIKQKFDEAYRPA-----WHCV 59
+Q+ + + + ++E L AL + DC + H ++ K DE Y P+ +H +
Sbjct: 307 IQKLNEAESIVEEIVEKYPLEQIALSFNGGKDCTVLLHLLRLKVDEKYGPSTPIQGFHIM 366
Query: 60 VGKDFGSCITHLCGSLIFFRMEMMEF 85
V F + + F+ ++++EF
Sbjct: 367 VEDQFPEATQFIIDAAKFYNIQVLEF 392
>sp|Q721F4|DAPEL_LISMF N-acetyldiaminopimelate deacetylase OS=Listeria monocytogenes
serotype 4b (strain F2365) GN=LMOf2365_1033 PE=3 SV=1
Length = 371
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 23 ELAYQA-LDLHEVSD----------CQSIAHYIKQKFDEAYRPAWHCVVGKDFGSCITHL 71
E AYQ ++ H SD ++ H++++++ E+Y PA + G+DFG ++ +
Sbjct: 271 EEAYQCEVEFHPGSDYYQVDNDPVETEAFIHFLEEQYPESYVPARSAMTGEDFGYFLSEI 330
Query: 72 CGSLIFF 78
G + +
Sbjct: 331 KGFMFWL 337
>sp|C1L1T3|DAPEL_LISMC N-acetyldiaminopimelate deacetylase OS=Listeria monocytogenes
serotype 4b (strain CLIP80459) GN=Lm4b_01032 PE=3 SV=1
Length = 371
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 23 ELAYQA-LDLHEVSD----------CQSIAHYIKQKFDEAYRPAWHCVVGKDFGSCITHL 71
E AYQ ++ H SD ++ H++++++ E+Y PA + G+DFG ++ +
Sbjct: 271 EEAYQCEVEFHPGSDYYQVDNDPVETEAFIHFLEEQYPESYVPARSAMTGEDFGYFLSEI 330
Query: 72 CGSLIFF 78
G + +
Sbjct: 331 KGFMFWL 337
>sp|Q92D10|DAPEL_LISIN N-acetyldiaminopimelate deacetylase OS=Listeria innocua serovar 6a
(strain CLIP 11262) GN=lin1011 PE=3 SV=1
Length = 371
Score = 30.8 bits (68), Expect = 2.2, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 11/67 (16%)
Query: 23 ELAYQA-LDLHEVSD----------CQSIAHYIKQKFDEAYRPAWHCVVGKDFGSCITHL 71
E AYQ ++ H SD + H++++++ E+Y PA + G+DFG ++ +
Sbjct: 271 EEAYQCEVEFHPGSDYYQVDNDPVETEEFIHFLEEQYPESYVPARSAMTGEDFGYFLSEI 330
Query: 72 CGSLIFF 78
G + +
Sbjct: 331 KGFMFWL 337
>sp|Q8Y8A0|DAPEL_LISMO N-acetyldiaminopimelate deacetylase OS=Listeria monocytogenes
serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=lmo1012
PE=3 SV=1
Length = 371
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 11/67 (16%)
Query: 23 ELAYQA-LDLHEVSD----------CQSIAHYIKQKFDEAYRPAWHCVVGKDFGSCITHL 71
E AYQ ++ H SD + H++++++ E+Y PA + G+DFG ++ +
Sbjct: 271 EEAYQCEVEFHPGSDYYQVDNDPVETEEFIHFLEEQYPESYVPARSAMTGEDFGYFLSEI 330
Query: 72 CGSLIFF 78
G + +
Sbjct: 331 KGFMFWL 337
>sp|B8DEC3|DAPEL_LISMH N-acetyldiaminopimelate deacetylase OS=Listeria monocytogenes
serotype 4a (strain HCC23) GN=LMHCC_1609 PE=3 SV=1
Length = 371
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 11/67 (16%)
Query: 23 ELAYQA-LDLHEVSD----------CQSIAHYIKQKFDEAYRPAWHCVVGKDFGSCITHL 71
E AYQ ++ H SD + H++++++ E+Y PA + G+DFG ++ +
Sbjct: 271 EEAYQCEVEFHPGSDYYQVDNDPVETEEFIHFLEEQYPESYVPARSAMTGEDFGYFLSEI 330
Query: 72 CGSLIFF 78
G + +
Sbjct: 331 KGFMFWL 337
>sp|B4MR59|FBSP1_DROWI F-box/SPRY domain-containing protein 1 OS=Drosophila willistoni
GN=Fsn PE=3 SV=1
Length = 255
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/82 (20%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 20 HVMELAYQALDLHEVSD----CQSIAHYIKQKFDEAYRPAWHCVVGKDFGSCITHLCGSL 75
+V+E+ + LDL+++S C+S H++ + + +R WHC+ + + L S+
Sbjct: 12 NVLEVIFSYLDLNDLSRCSQVCRSWHHFLNDENSDVWR--WHCLHKLPKEAMKSDLLTSV 69
Query: 76 IFFRMEMMEFLVFKDGKDCTES 97
++ ++ + DC+ +
Sbjct: 70 STYKTKLRAYFHAWSPNDCSRN 91
>sp|Q4IPB3|CWC27_GIBZE Peptidyl-prolyl isomerase CWC27 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=CWC27 PE=3
SV=1
Length = 548
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 3 EGKPVVQETDMPDELQSHVMELAYQALDLHEVSDCQSIAHYIKQKFDEAYRPAW 56
E +P +ET E + + + DLH +++CQS + KQ+ DE+ W
Sbjct: 415 ENEPAARETTKDGE-DAQAGDEEAELCDLHFIANCQSCTSWDKQEKDESDDEGW 467
>sp|Q9FHA3|DPOLA_ARATH DNA polymerase alpha catalytic subunit OS=Arabidopsis thaliana
GN=POLA PE=3 SV=2
Length = 1524
Score = 29.3 bits (64), Expect = 7.2, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 31/121 (25%)
Query: 2 LEGKPVVQETDMPDELQSHV-MELAYQALD-------LHEVSDCQSIAHYIKQKFDEAYR 53
L+G+ ++Q T D +Q+H+ +E+ Y D L ++ + ++I + Q+ ++ YR
Sbjct: 1021 LQGRDILQRT--VDLVQNHLNLEVIYGDTDSIMIHSGLDDIEEVKAIKSKVIQEVNKKYR 1078
Query: 54 PAWHCVVGKDFGSCITHLCGSLIFFRMEMMEF-------LVFKDGKDCTESKEEAVGMLQ 106
C+ C I+ RM ++ L FKDGK C + + + V M++
Sbjct: 1079 -------------CLKIDCDG-IYKRMLLLRKKKYAAVKLQFKDGKPCEDIERKGVDMVR 1124
Query: 107 K 107
+
Sbjct: 1125 R 1125
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,390,755
Number of Sequences: 539616
Number of extensions: 1516248
Number of successful extensions: 2922
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2858
Number of HSP's gapped (non-prelim): 45
length of query: 113
length of database: 191,569,459
effective HSP length: 81
effective length of query: 32
effective length of database: 147,860,563
effective search space: 4731538016
effective search space used: 4731538016
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)