Query 033685
Match_columns 113
No_of_seqs 112 out of 1111
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 08:06:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033685.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033685hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gme_A Heat shock protein 16.9 100.0 2.1E-31 7E-36 175.5 12.1 110 4-113 42-151 (151)
2 3gla_A Low molecular weight he 100.0 1.2E-30 4E-35 161.1 13.3 98 3-101 2-99 (100)
3 4eld_A MJ16.5-P1, small heat s 100.0 2.4E-29 8.3E-34 167.1 11.9 104 6-112 57-161 (161)
4 4fei_A Heat shock protein-rela 100.0 4.6E-29 1.6E-33 154.6 11.5 95 3-103 4-98 (102)
5 3aab_A Putative uncharacterize 99.9 2.3E-27 8E-32 151.3 10.5 95 4-102 23-118 (123)
6 3l1e_A Alpha-crystallin A chai 99.9 1.5E-26 5.2E-31 144.2 12.6 99 6-112 3-105 (106)
7 2wj5_A Heat shock protein beta 99.9 3.9E-26 1.3E-30 141.2 11.4 96 7-110 3-99 (101)
8 3q9p_A Heat shock protein beta 99.9 1.6E-24 5.5E-29 130.1 11.1 82 10-99 2-84 (85)
9 2klr_A Alpha-crystallin B chai 99.9 3.4E-24 1.2E-28 144.0 10.3 96 8-112 66-162 (175)
10 2y1y_A Alpha-crystallin B chai 99.9 1.1E-23 3.6E-28 127.7 11.3 85 12-104 3-88 (90)
11 2bol_A TSP36, small heat shock 99.9 9.9E-23 3.4E-27 147.4 11.3 91 4-103 97-192 (314)
12 2bol_A TSP36, small heat shock 99.8 2.2E-21 7.5E-26 140.4 8.7 88 7-99 222-313 (314)
13 1rl1_A Suppressor of G2 allele 99.3 2.6E-11 8.9E-16 75.6 8.2 81 5-101 9-89 (114)
14 2xcm_C SGT1-like protein, cyto 99.3 2.7E-11 9.1E-16 72.7 7.9 81 5-101 2-82 (92)
15 2k8q_A Protein SHQ1; beta-sand 98.8 1.2E-08 4.3E-13 65.1 6.8 78 4-102 2-84 (134)
16 3eud_A Protein SHQ1; CS domain 98.8 1.8E-07 6.2E-12 58.0 11.1 79 4-103 16-99 (115)
17 3igf_A ALL4481 protein; two-do 98.7 3.3E-08 1.1E-12 73.0 7.8 73 5-100 297-370 (374)
18 1x5m_A Calcyclin-binding prote 98.4 1E-05 3.5E-10 51.1 11.5 80 6-101 21-104 (127)
19 1wh0_A Ubiquitin carboxyl-term 98.3 9.4E-06 3.2E-10 51.9 9.5 88 5-101 19-112 (134)
20 1wgv_A KIAA1068 protein; CS do 98.1 5.1E-05 1.7E-09 47.6 9.9 81 5-101 19-102 (124)
21 1ejf_A Progesterone receptor P 98.1 3.6E-05 1.2E-09 48.4 8.9 79 6-101 4-82 (125)
22 2kmw_A Uncharacterized protein 98.0 2.1E-05 7E-10 51.2 6.8 80 3-101 2-82 (150)
23 1wfi_A Nuclear distribution ge 97.9 0.00019 6.5E-09 45.4 9.6 78 5-101 7-88 (131)
24 3qor_A Nuclear migration prote 97.9 0.00019 6.5E-09 44.9 9.5 78 5-101 16-97 (121)
25 2o30_A Nuclear movement protei 97.9 0.0002 6.7E-09 45.3 9.6 76 4-99 3-79 (131)
26 2cg9_X CO-chaperone protein SB 97.8 1.2E-05 4.1E-10 51.3 2.4 86 3-100 4-97 (134)
27 2rh0_A NUDC domain-containing 97.7 0.00094 3.2E-08 43.5 10.8 78 4-101 12-91 (157)
28 3q9p_A Heat shock protein beta 90.4 0.83 2.8E-05 26.1 5.3 33 67-100 8-40 (85)
29 2y1y_A Alpha-crystallin B chai 87.7 1.2 4.2E-05 25.6 4.8 32 67-99 7-38 (90)
30 3l1e_A Alpha-crystallin A chai 87.3 1.4 4.8E-05 26.3 5.0 32 67-99 13-44 (106)
31 2wj5_A Heat shock protein beta 86.5 1.5 5E-05 25.9 4.7 33 67-100 12-44 (101)
32 3gla_A Low molecular weight he 86.1 1.8 6.3E-05 25.1 5.0 33 67-100 15-47 (100)
33 4eld_A MJ16.5-P1, small heat s 84.8 4.3 0.00015 25.9 6.6 34 66-100 66-99 (161)
34 3aab_A Putative uncharacterize 83.3 3.7 0.00013 24.9 5.6 35 66-101 34-69 (123)
35 4fei_A Heat shock protein-rela 82.1 3.8 0.00013 24.0 5.2 34 16-50 62-96 (102)
36 1gme_A Heat shock protein 16.9 76.4 9.8 0.00033 24.0 6.1 34 67-101 54-88 (151)
37 2klr_A Alpha-crystallin B chai 76.4 4.1 0.00014 26.6 4.4 33 66-99 73-105 (175)
38 2nwt_A UPF0165 protein AF_2212 60.4 14 0.00047 20.5 3.6 15 81-95 3-17 (69)
39 2cql_A OK/SW-CL.103, 60S ribos 57.9 21 0.00072 21.0 4.5 19 28-47 20-38 (100)
40 1rl6_A Protein (ribosomal prot 56.7 32 0.0011 22.4 5.6 45 28-98 11-55 (177)
41 1nkw_E 50S ribosomal protein L 55.4 44 0.0015 22.5 6.2 46 28-99 39-84 (212)
42 3j21_F 50S ribosomal protein L 51.5 31 0.0011 22.6 4.9 45 28-97 14-58 (184)
43 2o30_A Nuclear movement protei 50.9 39 0.0013 20.5 5.3 31 67-97 15-45 (131)
44 1ew4_A CYAY protein; friedreic 50.0 10 0.00035 22.7 2.1 17 82-98 29-45 (106)
45 1vq8_E 50S ribosomal protein L 48.9 43 0.0015 21.9 5.2 46 28-98 9-54 (178)
46 1wgv_A KIAA1068 protein; CS do 47.0 33 0.0011 20.6 4.3 32 66-97 29-61 (124)
47 3iln_A Laminarinase; jelly ROW 45.1 40 0.0014 22.8 4.8 44 33-77 49-97 (251)
48 1n91_A ORF, hypothetical prote 44.1 50 0.0017 19.8 4.9 38 10-49 8-46 (108)
49 3qqz_A Putative uncharacterize 42.3 79 0.0027 21.5 8.2 70 17-95 13-86 (255)
50 3oeq_A Frataxin homolog, mitoc 40.6 24 0.00083 21.7 2.8 16 83-98 49-64 (123)
51 3v2d_H 50S ribosomal protein L 40.1 75 0.0026 20.7 5.3 44 28-97 12-55 (180)
52 2hyk_A Beta-1,3-glucanase; fam 38.6 40 0.0014 22.6 4.0 45 33-77 52-99 (245)
53 3iz5_F 60S ribosomal protein L 38.1 82 0.0028 20.7 5.3 46 28-98 13-60 (190)
54 4awd_A Beta-porphyranase; hydr 35.2 99 0.0034 22.0 5.7 48 27-77 85-145 (324)
55 3t3l_A Frataxin, mitochondrial 34.3 28 0.00094 21.6 2.4 17 81-97 40-56 (129)
56 2hbp_A Cytoskeleton assembly c 33.2 21 0.0007 19.7 1.5 30 9-38 7-36 (68)
57 2zkr_e 60S ribosomal protein L 28.5 1.2E+02 0.0043 19.8 5.0 52 22-98 7-61 (192)
58 2rh0_A NUDC domain-containing 27.7 1.2E+02 0.004 19.1 6.2 32 66-97 23-54 (157)
59 1ulv_A Glucodextranase; GH fam 27.7 96 0.0033 25.7 5.1 89 7-99 810-914 (1020)
60 2ayh_A 1,3-1,4-beta-D-glucan 4 27.6 94 0.0032 20.2 4.4 44 33-76 39-83 (214)
61 4gzv_A Hypothetical protein; A 27.5 1.2E+02 0.0041 19.1 6.7 73 5-97 35-109 (142)
62 2k0r_A Thiol:disulfide interch 27.3 1.1E+02 0.0037 18.6 5.7 32 7-38 16-50 (128)
63 3ug3_A Alpha-L-arabinofuranosi 26.9 29 0.00098 26.5 1.8 28 71-99 467-494 (504)
64 2gjh_A Designed protein; oblig 26.5 64 0.0022 16.6 2.6 22 26-48 30-51 (62)
65 3jx8_A Putative lipoprotein; s 26.0 62 0.0021 21.7 3.3 39 8-47 34-72 (250)
66 4i95_A Putative uncharacterize 25.7 1.3E+02 0.0044 18.9 7.1 70 7-96 37-108 (142)
67 3qor_A Nuclear migration prote 25.1 1.1E+02 0.0039 18.1 5.7 34 65-98 25-60 (121)
68 2uwa_A Cellulase; glycoside hy 24.9 1.7E+02 0.0059 20.1 5.4 43 27-77 31-74 (274)
69 1q5l_A Chaperone protein DNAK; 24.8 1.2E+02 0.0042 18.4 4.8 28 82-111 99-129 (135)
70 1ip9_A BEM1 protein; ubiquitin 24.6 37 0.0013 19.5 1.6 24 76-99 8-31 (85)
71 2ks0_A Uncharacterized protein 24.5 50 0.0017 18.2 2.1 22 25-47 17-38 (71)
72 3o5s_A Beta-glucanase; glycosy 24.2 1.2E+02 0.0041 20.4 4.4 44 33-76 63-107 (238)
73 1nvp_C Transcription initiatio 23.5 36 0.0012 19.2 1.3 15 80-94 46-60 (76)
74 1o4z_A Beta-agarase B; glycosi 23.3 1.4E+02 0.0046 21.4 4.7 47 28-77 104-153 (346)
75 3u5e_H L8, RP24, YL11, 60S rib 22.6 1.7E+02 0.0058 19.2 6.6 46 28-98 13-59 (191)
76 3rd4_A Uncharacterized protein 22.6 74 0.0025 18.8 2.7 25 12-36 33-57 (100)
77 3cdw_H Protein 3B, VPG; RNA-de 22.5 48 0.0016 14.7 1.4 17 97-113 7-23 (26)
78 3d33_A Domain of unknown funct 22.4 96 0.0033 18.4 3.3 26 69-99 22-47 (108)
79 3bqa_A Sensor protein PHOQ; hi 21.9 22 0.00075 22.5 0.3 15 85-99 21-35 (148)
80 2vy0_A Endo-beta-1,3-glucanase 21.5 1.5E+02 0.005 19.9 4.5 44 33-77 59-113 (264)
81 3r8s_G 50S ribosomal protein L 20.5 55 0.0019 21.2 2.0 43 28-96 11-53 (176)
82 2kgs_A Uncharacterized protein 20.0 82 0.0028 19.1 2.7 26 23-49 2-27 (132)
No 1
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.97 E-value=2.1e-31 Score=175.55 Aligned_cols=110 Identities=68% Similarity=1.039 Sum_probs=102.1
Q ss_pred ecceecEEEcCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCce
Q 033685 4 IPNFINLTETPEAHVFKTDLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQI 83 (113)
Q Consensus 4 ~~p~~dv~e~~~~~~i~~~lpG~~~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i 83 (113)
+.|++||+|++++|.|.++|||+++++|+|.+.+++.|+|+|+++.+...++.+|+++|+.+|.|.|+|.||.++|.+++
T Consensus 42 ~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i 121 (151)
T 1gme_A 42 ANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEV 121 (151)
T ss_dssp GGGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGC
T ss_pred cCCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccce
Confidence 47999999999999999999999999999999644699999999887777788999999999999999999999999999
Q ss_pred EEEEeCCEEEEEEeCCCCCCCCeEEEEcCC
Q 033685 84 KASMESGVLTVTVPKVEVTKPDVKAIEISG 113 (113)
Q Consensus 84 ~A~~~~GiL~I~~pk~~~~~~~~~~I~I~~ 113 (113)
+|+|+||+|+|++||..+.++..++|+|+|
T Consensus 122 ~A~~~nGvL~I~lPK~~~~~~~~~~I~I~~ 151 (151)
T 1gme_A 122 KAGLENGVLTVTVPKAEVKKPEVKAIQISG 151 (151)
T ss_dssp EEEEETTEEEEEEECCCCCTTCCCCCCCCC
T ss_pred EEEEECCEEEEEEEccCcCCCCCeEeeeCC
Confidence 999999999999999988777778999987
No 2
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.97 E-value=1.2e-30 Score=161.09 Aligned_cols=98 Identities=31% Similarity=0.590 Sum_probs=92.0
Q ss_pred eecceecEEEcCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCc
Q 033685 3 LIPNFINLTETPEAHVFKTDLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQ 82 (113)
Q Consensus 3 ~~~p~~dv~e~~~~~~i~~~lpG~~~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~ 82 (113)
.|.|++||.++++.|.|.++|||+++++|+|.+.+ +.|+|+|.+......+..+|+++|+.+|.|.|+|.||.++|.++
T Consensus 2 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~ 80 (100)
T 3gla_A 2 QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDK-GILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADG 80 (100)
T ss_dssp CSCCCEEEEECSSEEEEEEECTTSCGGGCEEEEET-TEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTS
T ss_pred CccCcEEEEECCCEEEEEEECCCCCHHHEEEEEEC-CEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHH
Confidence 47899999999999999999999999999999998 59999999998877788899999999999999999999999999
Q ss_pred eEEEEeCCEEEEEEeCCCC
Q 033685 83 IKASMESGVLTVTVPKVEV 101 (113)
Q Consensus 83 i~A~~~~GiL~I~~pk~~~ 101 (113)
++|+|+||+|+|++||..+
T Consensus 81 i~A~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 81 ITAAGRNGVLEIRIPKRPA 99 (100)
T ss_dssp CEEEEETTEEEEEEEBC--
T ss_pred eEEEEeCCEEEEEEecCCC
Confidence 9999999999999999865
No 3
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.96 E-value=2.4e-29 Score=167.13 Aligned_cols=104 Identities=27% Similarity=0.352 Sum_probs=95.5
Q ss_pred ceecEEEcCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeee-eeeeEEEEEECCCCcccCceE
Q 033685 6 NFINLTETPEAHVFKTDLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVER-SSGMFSRRFRLPENVKMDQIK 84 (113)
Q Consensus 6 p~~dv~e~~~~~~i~~~lpG~~~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~-~~~~f~r~~~lP~~vd~~~i~ 84 (113)
+|+||.|++++|+|.++|||+++++|+|.+.+ +.|+|+|+++.....++.+++++|+ .+|.|.|+|.||.+||.++++
T Consensus 57 ~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~-~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~ 135 (161)
T 4eld_A 57 MPISIIEGDQHIKVIAWLPGVNKEDIILNAVG-DTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENAS 135 (161)
T ss_dssp CCEEEEECSSEEEEEEECTTCCGGGEEEEEET-TEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCE
T ss_pred cceeEEEeCCEEEEEEECCCCChHhEEEEEEC-CEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEE
Confidence 34999999999999999999999999999998 5999999998876667778999999 999999999999999999999
Q ss_pred EEEeCCEEEEEEeCCCCCCCCeEEEEcC
Q 033685 85 ASMESGVLTVTVPKVEVTKPDVKAIEIS 112 (113)
Q Consensus 85 A~~~~GiL~I~~pk~~~~~~~~~~I~I~ 112 (113)
|+|+||+|+|++||...+++ ++|+|+
T Consensus 136 A~~~nGvL~I~lpK~~~~~~--r~I~Ie 161 (161)
T 4eld_A 136 AKFENGVLSVILPKAESSIK--KGINIE 161 (161)
T ss_dssp EEEETTEEEEEEEBCGGGSC--CCCCCC
T ss_pred EEEECCEEEEEEEcCCCCCC--cEeecC
Confidence 99999999999999876554 788885
No 4
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.96 E-value=4.6e-29 Score=154.58 Aligned_cols=95 Identities=27% Similarity=0.354 Sum_probs=88.1
Q ss_pred eecceecEEEcCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCc
Q 033685 3 LIPNFINLTETPEAHVFKTDLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQ 82 (113)
Q Consensus 3 ~~~p~~dv~e~~~~~~i~~~lpG~~~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~ 82 (113)
.|.|++||.|+++.|.|.++|||+++++|+|.+.+ +.|+|+|.++. ..+|+++|+..|.|.|+|.||.++|.++
T Consensus 4 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~-----~~~~~~~er~~g~f~R~~~LP~~vd~~~ 77 (102)
T 4fei_A 4 PWTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDG-GQLTVSGERPG-----TEHLLRSERPSGRFVRELAFPEPVRPAS 77 (102)
T ss_dssp ECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEET-TEEEEEEEECC-----CSSCSSCCSEEEEEEEEEECSSCBCTTC
T ss_pred cccCcEEEEEcCCEEEEEEECCCCchHhEEEEEEC-CEEEEEEEEec-----CCCEEEEEEeccEEEEEEECCCCcchhH
Confidence 47899999999999999999999999999999998 59999999853 3678899999999999999999999999
Q ss_pred eEEEEeCCEEEEEEeCCCCCC
Q 033685 83 IKASMESGVLTVTVPKVEVTK 103 (113)
Q Consensus 83 i~A~~~~GiL~I~~pk~~~~~ 103 (113)
++|+|+||+|+|++||..++.
T Consensus 78 i~A~~~~GvL~I~lpK~~~~~ 98 (102)
T 4fei_A 78 GVASLAGGVLTVRFEKLRPTI 98 (102)
T ss_dssp CEEEEETTEEEEEEEBSSCCC
T ss_pred cEEEEECCEEEEEEEccCccc
Confidence 999999999999999987643
No 5
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.95 E-value=2.3e-27 Score=151.30 Aligned_cols=95 Identities=27% Similarity=0.387 Sum_probs=87.4
Q ss_pred ecceecEEEcCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCce
Q 033685 4 IPNFINLTETPEAHVFKTDLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQI 83 (113)
Q Consensus 4 ~~p~~dv~e~~~~~~i~~~lpG~~~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i 83 (113)
+.|++||.+++++|.|.++|||+++++|+|.+.+++.|+|+|.+.... +.+|++.|+.+ .|.|+|.||.++|.+++
T Consensus 23 ~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~---~~~~~~~Er~~-~f~R~~~LP~~vd~~~i 98 (123)
T 3aab_A 23 VYPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITE---PGVKYLTQRPK-YVRKVIRLPYNVAKDAE 98 (123)
T ss_dssp HCSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCC---CSCEEEECSCS-EEEEEEECSSEECTTCC
T ss_pred CCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccC---CCeEEEEEEeE-EEEEEEECCCCcCcchh
Confidence 458999999999999999999999999999999824999999987654 67899999999 99999999999999999
Q ss_pred -EEEEeCCEEEEEEeCCCCC
Q 033685 84 -KASMESGVLTVTVPKVEVT 102 (113)
Q Consensus 84 -~A~~~~GiL~I~~pk~~~~ 102 (113)
+|+|+||+|+|++||....
T Consensus 99 ~~A~~~~GvL~I~lPK~~~~ 118 (123)
T 3aab_A 99 ISGKYENGVLTIRIPIAGTS 118 (123)
T ss_dssp CEEEEETTEEEEEEEGGGEE
T ss_pred CeeEEcCCEEEEEEEcCCCC
Confidence 9999999999999998653
No 6
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.94 E-value=1.5e-26 Score=144.19 Aligned_cols=99 Identities=25% Similarity=0.459 Sum_probs=85.3
Q ss_pred ceecEEEcCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCceEE
Q 033685 6 NFINLTETPEAHVFKTDLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKA 85 (113)
Q Consensus 6 p~~dv~e~~~~~~i~~~lpG~~~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~A 85 (113)
...+|+++++.|.|.++|||+++++|+|.+.+ +.|+|+|.+.... +..+|.++ .|.|+|.||.++|.++++|
T Consensus 3 g~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~--~~~~~~~~-----eF~R~~~LP~~vd~~~i~A 74 (106)
T 3l1e_A 3 GISEVRSDRDKFVIFLDVKHFSPEDLTVKVQE-DFVEIHGKHNERQ--DDHGYISR-----EFHRRYRLPSNVDQSALSC 74 (106)
T ss_dssp CSEEEEECSSEEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEEEE--TTTEEEEE-----EEEEEEECCTTBCTTSCEE
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEcccc--CCCCEEEE-----EEEEEEECCCCcChhHcEE
Confidence 45799999999999999999999999999998 5999999976543 23445544 4999999999999999999
Q ss_pred EE-eCCEEEEEEeCCCCCC---CCeEEEEcC
Q 033685 86 SM-ESGVLTVTVPKVEVTK---PDVKAIEIS 112 (113)
Q Consensus 86 ~~-~~GiL~I~~pk~~~~~---~~~~~I~I~ 112 (113)
+| +||+|+|++||..++. ...|+|+|+
T Consensus 75 ~~s~~GvL~I~~PK~~~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 75 SLSADGMLTFSGPKIPSGVDAGHSERAIPVS 105 (106)
T ss_dssp EECTTSEEEEEEEBCCCCTTTTSSSCCCCCC
T ss_pred EECCCCEEEEEEEccCcccccCCCCeEeeec
Confidence 99 8999999999998753 466889886
No 7
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.94 E-value=3.9e-26 Score=141.20 Aligned_cols=96 Identities=18% Similarity=0.316 Sum_probs=82.4
Q ss_pred eecEEEcCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCceEEE
Q 033685 7 FINLTETPEAHVFKTDLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKAS 86 (113)
Q Consensus 7 ~~dv~e~~~~~~i~~~lpG~~~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~A~ 86 (113)
.+||+++++.|.|.++|||+++++|+|.+.+ +.|+|+|.+.... ++.+|+++| |.|+|.||.++|.++++|+
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~~~--~~~~~~~~e-----F~R~~~LP~~vd~~~i~A~ 74 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVG-DHVEVHARHEERP--DEHGFIARE-----FHRRYRLPPGVDPAAVTSA 74 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEECS--STTCCEEEE-----EEEEEECCTTBCTTCCEEE
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEeccc--CCCCEEEEE-----EEEEEECCCCcChhHCEEE
Confidence 5799999999999999999999999999998 5999999987543 344566554 9999999999999999999
Q ss_pred E-eCCEEEEEEeCCCCCCCCeEEEE
Q 033685 87 M-ESGVLTVTVPKVEVTKPDVKAIE 110 (113)
Q Consensus 87 ~-~~GiL~I~~pk~~~~~~~~~~I~ 110 (113)
| +||+|+|++||..+.+++...|.
T Consensus 75 ~s~nGvL~I~lPK~~~~~~~~~~i~ 99 (101)
T 2wj5_A 75 LSPEGVLSIQATPASAQASLPSPPA 99 (101)
T ss_dssp ECTTSEEEEEECBCCCCCSSCC---
T ss_pred ECCCCEEEEEEECCCcCCCCCCccc
Confidence 9 89999999999988777655554
No 8
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.92 E-value=1.6e-24 Score=130.08 Aligned_cols=82 Identities=26% Similarity=0.456 Sum_probs=69.3
Q ss_pred EEEcCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCceEEEEe-
Q 033685 10 LTETPEAHVFKTDLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASME- 88 (113)
Q Consensus 10 v~e~~~~~~i~~~lpG~~~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~A~~~- 88 (113)
+.|++++|.|.++|||+++++|+|.+.+ +.|+|+|.++..... . ++..++|.|+|.||.++|+++++|+|.
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~~~--~-----~~~~~~F~R~~~LP~~vd~~~i~A~~~~ 73 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKD-GVVEITGKHAARQDE--H-----GYISRCFTRKYTLPPGVDPTQVSSSLSP 73 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEET-TEEEEEEEEC--------------CCCEEEEEEEECCTTCCGGGCEEEECT
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEccccCC--C-----CEEEEEEEEEEECCCCcChHHcEEEECC
Confidence 4689999999999999999999999998 599999998765322 1 224678999999999999999999998
Q ss_pred CCEEEEEEeCC
Q 033685 89 SGVLTVTVPKV 99 (113)
Q Consensus 89 ~GiL~I~~pk~ 99 (113)
||+|+|++||.
T Consensus 74 ~GvL~I~lPK~ 84 (85)
T 3q9p_A 74 EGTLTVEAPMP 84 (85)
T ss_dssp TSEEEEEEECC
T ss_pred CCEEEEEEEcC
Confidence 99999999996
No 9
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.91 E-value=3.4e-24 Score=143.97 Aligned_cols=96 Identities=26% Similarity=0.455 Sum_probs=72.9
Q ss_pred ecEEEcCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCceEEEE
Q 033685 8 INLTETPEAHVFKTDLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASM 87 (113)
Q Consensus 8 ~dv~e~~~~~~i~~~lpG~~~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~A~~ 87 (113)
+||.++++.|.|.++|||+++++|+|.+.+ +.|+|+|++.... ++.+|+.+| |.|+|.||.+||.++++|+|
T Consensus 66 ~dv~e~~d~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~~~--~~~~~~~re-----F~R~~~LP~~Vd~~~i~A~~ 137 (175)
T 2klr_A 66 SEMRLEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEERQ--DEHGFISRE-----FHRKYRIPADVDPLTITSSL 137 (175)
T ss_dssp ---CCCCSEEEEEECCSSCCGGGEEEEEET-TEEEEEEEEEEEE--ETTEEEEEE-----EEEEEECTTTCCTTTCEEEE
T ss_pred eEEEEcCCeEEEEEECCCCChHHEEEEEEC-CEEEEEEEEcccc--cCCceEEEE-----EEEEEECCCCcChhHeEEEE
Confidence 699999999999999999999999999998 5999999986543 334565544 99999999999999999999
Q ss_pred -eCCEEEEEEeCCCCCCCCeEEEEcC
Q 033685 88 -ESGVLTVTVPKVEVTKPDVKAIEIS 112 (113)
Q Consensus 88 -~~GiL~I~~pk~~~~~~~~~~I~I~ 112 (113)
+||+|+|++||..... ..++|+|+
T Consensus 138 s~dGvL~I~lPK~~~~~-~~r~I~I~ 162 (175)
T 2klr_A 138 SSDGVLTVNGPRKQVSG-PERTIPIT 162 (175)
T ss_dssp CTTSCEEEEEECC-------------
T ss_pred cCCCEEEEEEECCCCCC-CCeEEEEe
Confidence 7999999999986543 34788885
No 10
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.91 E-value=1.1e-23 Score=127.71 Aligned_cols=85 Identities=29% Similarity=0.507 Sum_probs=69.4
Q ss_pred EcCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCceEEEE-eCC
Q 033685 12 ETPEAHVFKTDLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASM-ESG 90 (113)
Q Consensus 12 e~~~~~~i~~~lpG~~~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~A~~-~~G 90 (113)
++++.|.|.++|||+++++|+|.+.+ +.|+|+|.+.... ++.+|++++ |.|+|.||.++|.++++|+| +||
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~--~~~~~~~~e-----f~R~~~LP~~vd~~~i~A~~~~~G 74 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEERQ--DEHGFISRE-----FHRKYRIPADVDPLTITSSMSSDG 74 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEEEE--CSSSEEEEE-----EEEEEECCTTBCGGGCEEEECTTS
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEeccc--CCCCEEEEE-----EEEEEECCCCcChhHcEEEECCCC
Confidence 67899999999999999999999998 5999999987543 345566543 99999999999999999999 899
Q ss_pred EEEEEEeCCCCCCC
Q 033685 91 VLTVTVPKVEVTKP 104 (113)
Q Consensus 91 iL~I~~pk~~~~~~ 104 (113)
+|+|++||..++++
T Consensus 75 vL~I~~pK~~~~~p 88 (90)
T 2y1y_A 75 VLTVNGPRKQVSGP 88 (90)
T ss_dssp EEEEEECBC-----
T ss_pred EEEEEEEcCCCCCC
Confidence 99999999876554
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.89 E-value=9.9e-23 Score=147.43 Aligned_cols=91 Identities=18% Similarity=0.296 Sum_probs=81.5
Q ss_pred ecceecEEEcCC----eEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcc
Q 033685 4 IPNFINLTETPE----AHVFKTDLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVK 79 (113)
Q Consensus 4 ~~p~~dv~e~~~----~~~i~~~lpG~~~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd 79 (113)
+.|++|++|+++ +|.|.++|||+++++|+|.+.+ +.|+|+|++..+.+ . ++.+|.|.|+|.||.+||
T Consensus 97 ~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~-~~L~I~ge~~~~~e--~------~r~~g~F~R~~~LP~~Vd 167 (314)
T 2bol_A 97 LDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADK-NKLVVRAQKSVACG--D------AAMSESVGRSIPLPPSVD 167 (314)
T ss_dssp TGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEET-TEEEEEECCBSSTT--C------CCBCCCEEEEEECCTTBC
T ss_pred CCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEEC-CEEEEEEEEeccCC--C------CEEEEEEEEEEECCCCcc
Confidence 468999999999 9999999999999999999998 59999999875432 1 267899999999999999
Q ss_pred cCceEEEEe-CCEEEEEEeCCCCCC
Q 033685 80 MDQIKASME-SGVLTVTVPKVEVTK 103 (113)
Q Consensus 80 ~~~i~A~~~-~GiL~I~~pk~~~~~ 103 (113)
.++++|+|+ ||+|+|++||..++.
T Consensus 168 ~e~i~A~~~~nGVL~I~lPK~~~~~ 192 (314)
T 2bol_A 168 RNHIQATITTDDVLVIEAPVNEPNY 192 (314)
T ss_dssp GGGCEEEECSSSEEEEEEEBSSCCT
T ss_pred ccccEEEEeCCCEEEEEEeccCccc
Confidence 999999999 999999999987653
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.85 E-value=2.2e-21 Score=140.37 Aligned_cols=88 Identities=18% Similarity=0.289 Sum_probs=69.7
Q ss_pred eecEEEcC---CeEEEEEEc-CCCCCCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCc
Q 033685 7 FINLTETP---EAHVFKTDL-PGLRKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQ 82 (113)
Q Consensus 7 ~~dv~e~~---~~~~i~~~l-pG~~~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~ 82 (113)
..+|.+++ +.|.+.++| ||+++++|+|.+.+ +.|+|+|+++.+.. .++++|+.+|.|.|+|.||++||.++
T Consensus 222 ~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~-~~LtI~ge~~~~~~----~~~~~Er~~g~F~R~~~LP~~vd~~~ 296 (314)
T 2bol_A 222 GLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKG-NKVYVHGVTGKEEK----TENASHSEHREFYKAFVTPEVVDASK 296 (314)
T ss_dssp EEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESS-SEEEEEEEEC----------------CEEEEEEEECSSEECGGG
T ss_pred CCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEEC-CEEEEEEEEeccCC----ceEEEEEeeeEEEEEEECCCCcChHH
Confidence 45666654 579999999 99999999999998 69999999876543 46888999999999999999999999
Q ss_pred eEEEEeCCEEEEEEeCC
Q 033685 83 IKASMESGVLTVTVPKV 99 (113)
Q Consensus 83 i~A~~~~GiL~I~~pk~ 99 (113)
|+|+|+||+|+|++||.
T Consensus 297 i~A~~~dGvL~i~~Pk~ 313 (314)
T 2bol_A 297 TQAEIVDGLMVVEAPLF 313 (314)
T ss_dssp CEEEEETTEEEEEEEEE
T ss_pred eEEEEeCCEEEEEEecC
Confidence 99999999999999986
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.27 E-value=2.6e-11 Score=75.63 Aligned_cols=81 Identities=15% Similarity=0.140 Sum_probs=71.3
Q ss_pred cceecEEEcCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCceE
Q 033685 5 PNFINLTETPEAHVFKTDLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIK 84 (113)
Q Consensus 5 ~p~~dv~e~~~~~~i~~~lpG~~~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~ 84 (113)
.|.++|.++++.+.|.+.+||+.++++.|.+.+ +.|.|++.... ...|...+.|+..|+++..+
T Consensus 9 ~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~-~~l~v~~~~~~---------------~~~y~~~~~L~~~I~~e~s~ 72 (114)
T 1rl1_A 9 KIKYDWYQTESQVVITLMIKNVQKNDVNVEFSE-KELSALVKLPS---------------GEDYNLKLELLHPIIPEQST 72 (114)
T ss_dssp CCCEEEEECSSEEEEEECCCSCCGGGEEEECSS-SCEEEEEECTT---------------SSEEEEEECBSSCCCGGGEE
T ss_pred CCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEc-CEEEEEEEeCC---------------CcEEEEEeeCCCcCCccccE
Confidence 467899999999999999999999999999998 59999976421 12478899999999999999
Q ss_pred EEEeCCEEEEEEeCCCC
Q 033685 85 ASMESGVLTVTVPKVEV 101 (113)
Q Consensus 85 A~~~~GiL~I~~pk~~~ 101 (113)
+++.+|.|+|+|+|..+
T Consensus 73 ~~~~~~~l~i~L~K~~~ 89 (114)
T 1rl1_A 73 FKVLSTKIEIKLKKPEA 89 (114)
T ss_dssp EEECSSSEEEEEECSSC
T ss_pred EEEECCEEEEEEEcCCC
Confidence 99999999999999864
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.26 E-value=2.7e-11 Score=72.71 Aligned_cols=81 Identities=16% Similarity=0.206 Sum_probs=71.4
Q ss_pred cceecEEEcCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCceE
Q 033685 5 PNFINLTETPEAHVFKTDLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIK 84 (113)
Q Consensus 5 ~p~~dv~e~~~~~~i~~~lpG~~~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~ 84 (113)
.|.++++++++.+.|.+.+||+.++++.|.+.+ +.|.|++.... ...|...+.|+..|+++..+
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~-~~l~v~~~~~~---------------~~~y~~~~~L~~~I~~~~s~ 65 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGE-QILSVVIEVPG---------------EDAYYLQPRLFGKIIPDKCK 65 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECS-SBEEEEECCTT---------------SCCEEECCBBSSCBCGGGCE
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEEC-CEEEEEEEcCC---------------CcEEEEeeEcCCccCchhEE
Confidence 578999999999999999999999999999998 59999975421 12478889999999999999
Q ss_pred EEEeCCEEEEEEeCCCC
Q 033685 85 ASMESGVLTVTVPKVEV 101 (113)
Q Consensus 85 A~~~~GiL~I~~pk~~~ 101 (113)
+++.+|.|+|+|+|..+
T Consensus 66 ~~~~~~~l~i~L~K~~~ 82 (92)
T 2xcm_C 66 YEVLSTKIEICLAKADI 82 (92)
T ss_dssp EEECSSCEEEEEEBSSS
T ss_pred EEEECCEEEEEEEcCCC
Confidence 99999999999999864
No 15
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.82 E-value=1.2e-08 Score=65.10 Aligned_cols=78 Identities=15% Similarity=0.299 Sum_probs=68.7
Q ss_pred ecceecEEEcCCeEEEEEEcCCCC--CCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCc-cc
Q 033685 4 IPNFINLTETPEAHVFKTDLPGLR--KEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENV-KM 80 (113)
Q Consensus 4 ~~p~~dv~e~~~~~~i~~~lpG~~--~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v-d~ 80 (113)
..|.+.+.++++.++|.+.+|... .+++++.+.+ +.+.++ ...|.-.+.||..| +.
T Consensus 2 iTP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~-~~F~F~--------------------~~PYyLRL~LP~~V~e~ 60 (134)
T 2k8q_A 2 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFH--------------------LSPYYLRLRFPHELIDD 60 (134)
T ss_dssp CCSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECS-SSEEEC--------------------SSSSCEEECCSSCEECC
T ss_pred cCceEEEEECCCEEEEEEEcCccccCccccEEEEeC-CEEEEe--------------------cCCeEEEecCCCeeecC
Confidence 368999999999999999999998 8999999998 688888 33477789999998 88
Q ss_pred CceEEEE--eCCEEEEEEeCCCCC
Q 033685 81 DQIKASM--ESGVLTVTVPKVEVT 102 (113)
Q Consensus 81 ~~i~A~~--~~GiL~I~~pk~~~~ 102 (113)
+..+|+| +.|.|+|++||..+.
T Consensus 61 ~~~kA~YD~d~~~~~VtLpK~~~G 84 (134)
T 2k8q_A 61 ERSTAQYDSKDECINVKVAKLNKN 84 (134)
T ss_dssp SSCEEEEETTTTEEEEEEEESSTT
T ss_pred CCcceeEeccCCEEEEEEeCCCCC
Confidence 8899999 589999999998664
No 16
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.79 E-value=1.8e-07 Score=58.01 Aligned_cols=79 Identities=15% Similarity=0.291 Sum_probs=68.0
Q ss_pred ecceecEEEcCCeEEEEEEcCCCC--CCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCc-cc
Q 033685 4 IPNFINLTETPEAHVFKTDLPGLR--KEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENV-KM 80 (113)
Q Consensus 4 ~~p~~dv~e~~~~~~i~~~lpG~~--~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v-d~ 80 (113)
..|.+.+.++++.+.|.+.+|-+. ..++++.+.+ +.+.... ..|.-.+.||..+ +-
T Consensus 16 iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~-~~F~F~~--------------------~PYyLRL~lP~~vved 74 (115)
T 3eud_A 16 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFHL--------------------SPYYLRLRFPHELIDD 74 (115)
T ss_dssp BCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEET-TEEEEEE--------------------TTEEEEEECSSCEECS
T ss_pred eCCcEEEEECCCEEEEEEEcCceecccCccEEEEeC-CEEEEec--------------------CCeEEEEecCcceecC
Confidence 468999999999999999999876 7899999998 6888883 3477889999986 76
Q ss_pred CceEEEE--eCCEEEEEEeCCCCCC
Q 033685 81 DQIKASM--ESGVLTVTVPKVEVTK 103 (113)
Q Consensus 81 ~~i~A~~--~~GiL~I~~pk~~~~~ 103 (113)
+..+|+| ++|.++|++||..+.+
T Consensus 75 ~~~~A~YD~d~g~~~v~lpK~~~GE 99 (115)
T 3eud_A 75 ERSTAQYDSKDECINVKVAKLNKNE 99 (115)
T ss_dssp TTCEEEEETTTTEEEEEEEESSTTC
T ss_pred CCcceEEeCCCcEEEEEEcCCcCCC
Confidence 7789999 5999999999987643
No 17
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.73 E-value=3.3e-08 Score=72.97 Aligned_cols=73 Identities=19% Similarity=0.290 Sum_probs=62.6
Q ss_pred cceecEEEcCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCc-e
Q 033685 5 PNFINLTETPEAHVFKTDLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQ-I 83 (113)
Q Consensus 5 ~p~~dv~e~~~~~~i~~~lpG~~~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~-i 83 (113)
.+++.|... .|.+++.|||++++++++...++ .|+|+ .|.|+|.+.||..+.... .
T Consensus 297 ~~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~gd-eL~v~--------------------~g~~rR~i~LP~~L~~~~v~ 353 (374)
T 3igf_A 297 PKPITIDTH--NRQVRLFLPGFDKKQVKLTQYGP-EVTVE--------------------AGDQRRNIFLPPALSGRPIT 353 (374)
T ss_dssp CCSEEEETT--TTEEEEECTTCCGGGCEEEEETT-EEEEE--------------------ETTEEEEEECCTTTTTCCEE
T ss_pred CCCEEEEec--cEEEEEECCCCCHHHeEEEEECC-eEEEE--------------------ECCEeecccCCHHHcCCCcc
Confidence 456666444 89999999999999999999985 99999 678999999999987775 7
Q ss_pred EEEEeCCEEEEEEeCCC
Q 033685 84 KASMESGVLTVTVPKVE 100 (113)
Q Consensus 84 ~A~~~~GiL~I~~pk~~ 100 (113)
.|+|+||.|.|++-...
T Consensus 354 ~A~~~~~~L~i~~~~~~ 370 (374)
T 3igf_A 354 GAKFQNNYLIISFLEHH 370 (374)
T ss_dssp EEEEETTEEEEEECCC-
T ss_pred ccEEECCEEEEEEehhc
Confidence 89999999999997543
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.40 E-value=1e-05 Score=51.05 Aligned_cols=80 Identities=11% Similarity=0.135 Sum_probs=67.5
Q ss_pred ceecEEEcCCeEEEEEEcCCC---CCCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEE-CCCCcccC
Q 033685 6 NFINLTETPEAHVFKTDLPGL---RKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFR-LPENVKMD 81 (113)
Q Consensus 6 p~~dv~e~~~~~~i~~~lpG~---~~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~-lP~~vd~~ 81 (113)
+.++|.++.+...|.+.++|+ .++++.|.+.. +.|.+...... + ..|.-.+. |-..|+++
T Consensus 21 ~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~-~~l~v~~~~~~-----~----------~~y~~~~~~L~~~I~~e 84 (127)
T 1x5m_A 21 SNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTE-RSFDLLVKNLN-----G----------KSYSMIVNNLLKPISVE 84 (127)
T ss_dssp CSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECS-SEEEEEECSCS-----S----------SCEEEEEECBSSCCCTT
T ss_pred cEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEc-CEEEEEEEcCC-----C----------CcEEEEhHHhcCccCcc
Confidence 478999999999999999999 88999999998 69999864211 1 13667785 99999999
Q ss_pred ceEEEEeCCEEEEEEeCCCC
Q 033685 82 QIKASMESGVLTVTVPKVEV 101 (113)
Q Consensus 82 ~i~A~~~~GiL~I~~pk~~~ 101 (113)
.-+.+..++.++|+|.|..+
T Consensus 85 ~S~~~v~~~kVei~L~K~~~ 104 (127)
T 1x5m_A 85 GSSKKVKTDTVLILCRKKVE 104 (127)
T ss_dssp TCEEEEETTEEEEEEECSSS
T ss_pred cCEEEEeCCEEEEEEEECCC
Confidence 98989999999999999865
No 19
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.29 E-value=9.4e-06 Score=51.88 Aligned_cols=88 Identities=10% Similarity=0.101 Sum_probs=69.6
Q ss_pred cceecEEEc-CCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEeccc-----cCCCCcEEEeeeeeeeEEEEEECCCCc
Q 033685 5 PNFINLTET-PEAHVFKTDLPGLRKEEVKVEVEDDRVLQISGQRNIEK-----EDKNDTWHRVERSSGMFSRRFRLPENV 78 (113)
Q Consensus 5 ~p~~dv~e~-~~~~~i~~~lpG~~~~~i~v~v~~~~~L~I~~~~~~~~-----~~~~~~~~~~e~~~~~f~r~~~lP~~v 78 (113)
.+.++|+++ .+...|.+.++++.++++.|.+.. +.|.+........ +..+. .-.|.-.+.|-..|
T Consensus 19 ~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~-~~l~v~~~~~~~~~l~~~~a~g~--------~~~y~~~~~L~~~I 89 (134)
T 1wh0_A 19 FVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFRE-QDFTLIFQTRDGNFLRLHPGCGP--------HTTFRWQVKLRNLI 89 (134)
T ss_dssp CCCEEEEEETTTEEEEEEECCSBCTTSCEEEECS-SEEEEEECBCCHHHHHHSTTCCT--------TSCEEEEEEBSSCE
T ss_pred CCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEEC-CEEEEEEEcCCCcccccccccCc--------ceeEEEeccccccC
Confidence 578899999 999999999999999999999998 6999986542211 00000 00477778899999
Q ss_pred ccCceEEEEeCCEEEEEEeCCCC
Q 033685 79 KMDQIKASMESGVLTVTVPKVEV 101 (113)
Q Consensus 79 d~~~i~A~~~~GiL~I~~pk~~~ 101 (113)
+++.-+.++.++.++|+|.|+..
T Consensus 90 ~pe~S~~~v~~~kIeI~L~K~e~ 112 (134)
T 1wh0_A 90 EPEQCTFCFTASRIDICLRKRQS 112 (134)
T ss_dssp EEEEEEEEECSSEEEEEEEESSS
T ss_pred CchhCEEEEeCCEEEEEEEECCC
Confidence 99988888889999999999854
No 20
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=98.11 E-value=5.1e-05 Score=47.64 Aligned_cols=81 Identities=12% Similarity=0.191 Sum_probs=65.3
Q ss_pred cceecEEEcCCeEEEEEEcC-CC-CCCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCc
Q 033685 5 PNFINLTETPEAHVFKTDLP-GL-RKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQ 82 (113)
Q Consensus 5 ~p~~dv~e~~~~~~i~~~lp-G~-~~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~ 82 (113)
.|.+.+.++.+...|.+.|| |+ +.+++.|.+.. +.|.|..... .+. .+.-...|...|+++.
T Consensus 19 ~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~-~~l~v~~~~~-----~~~----------~~~~~~~L~~~I~~e~ 82 (124)
T 1wgv_A 19 RENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSS-SSIRVAMLEE-----NGE----------RVLMEGKLTHKINTES 82 (124)
T ss_dssp CSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECS-SEEEEEEECS-----SSE----------EEEEEEEBSSCBCTTT
T ss_pred CCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEc-CEEEEEEEcc-----CCC----------ceEEcccccCcCCCcC
Confidence 46789999999999999999 87 88999999998 6999986431 110 1234567999999999
Q ss_pred eEEEEeCCE-EEEEEeCCCC
Q 033685 83 IKASMESGV-LTVTVPKVEV 101 (113)
Q Consensus 83 i~A~~~~Gi-L~I~~pk~~~ 101 (113)
-.-++.++- |.|+|.|...
T Consensus 83 S~w~i~~~k~v~i~L~K~~~ 102 (124)
T 1wgv_A 83 SLWSLEPGKCVLVNLSKVGE 102 (124)
T ss_dssp CEEEECTTSEEEEEECBSSS
T ss_pred CEEEEeCCCEEEEEEEECCC
Confidence 898898874 9999999753
No 21
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=98.08 E-value=3.6e-05 Score=48.44 Aligned_cols=79 Identities=11% Similarity=0.035 Sum_probs=65.9
Q ss_pred ceecEEEcCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCceEE
Q 033685 6 NFINLTETPEAHVFKTDLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKA 85 (113)
Q Consensus 6 p~~dv~e~~~~~~i~~~lpG~~~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~A 85 (113)
|.++++++.+.+.|++.+|+. +++.|.+.. +.|.+++..... ...|.-.+.|-..|+++..+.
T Consensus 4 ~~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~-~~l~~~~~~~~~--------------~~~y~~~l~L~~~I~~e~S~~ 66 (125)
T 1ejf_A 4 ASAKWYDRRDYVFIEFCVEDS--KDVNVNFEK-SKLTFSCLGGSD--------------NFKHLNEIDLFHCIDPNDSKH 66 (125)
T ss_dssp CCEEEEECSSEEEEEECCTTE--EEEEEEEET-TEEEEEEEETTT--------------TEEEEEEEEBSSCEEEEEEEE
T ss_pred CceeEEeCCCEEEEEEEecCC--CceEEEEEC-CEEEEEEEeCCC--------------CceEEEEEEccceeccccCEE
Confidence 489999999999999999995 689999998 699998764111 113777889999999999888
Q ss_pred EEeCCEEEEEEeCCCC
Q 033685 86 SMESGVLTVTVPKVEV 101 (113)
Q Consensus 86 ~~~~GiL~I~~pk~~~ 101 (113)
+..++.+.|+|.|..+
T Consensus 67 ~v~~~kiei~L~K~~~ 82 (125)
T 1ejf_A 67 KRTDRSILCCLRKGES 82 (125)
T ss_dssp EECSSCEEEEEEESST
T ss_pred EECCCEEEEEEEECCC
Confidence 8888899999999864
No 22
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=98.00 E-value=2.1e-05 Score=51.18 Aligned_cols=80 Identities=11% Similarity=0.177 Sum_probs=66.2
Q ss_pred eecceecEEEcCCeEEEEEEcCCCCCCCEEEEEe-CCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccC
Q 033685 3 LIPNFINLTETPEAHVFKTDLPGLRKEEVKVEVE-DDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMD 81 (113)
Q Consensus 3 ~~~p~~dv~e~~~~~~i~~~lpG~~~~~i~v~v~-~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~ 81 (113)
...|.++++++.+.+.|.+.++++ +++.|.+. . +.|.+++. .. + ...|.-.+.|=..|+++
T Consensus 2 ~~~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~-~~l~~~~~-~~----~----------~~~y~~~l~L~~~Idpe 63 (150)
T 2kmw_A 2 SRNPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQ-GLFSFSAL-GA----Q----------GERFEFSLELYGKIMTE 63 (150)
T ss_dssp EECCCEEEEECSSEEEEEECCSSE--EEEEECCCTT-EEEEEEEE-TT----T----------TEEEEEEEEBSSCEEEE
T ss_pred CcCCcEEEEeCCCEEEEEEEeCCC--CceEEEEecC-CEEEEEEE-cC----C----------CceEEEEeEhhhccccc
Confidence 568999999999999999999997 57888888 6 69999986 11 1 12477788999999999
Q ss_pred ceEEEEeCCEEEEEEeCCCC
Q 033685 82 QIKASMESGVLTVTVPKVEV 101 (113)
Q Consensus 82 ~i~A~~~~GiL~I~~pk~~~ 101 (113)
.+.+....-+.|+|.|+.+
T Consensus 64 -S~~~v~~~kIei~L~K~e~ 82 (150)
T 2kmw_A 64 -YRKNVGLRNIIFSIQKEER 82 (150)
T ss_dssp -EEEEEESSSEEEEEEECCS
T ss_pred -ceEEecCCEEEEEEEECCC
Confidence 8888888889999999764
No 23
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.89 E-value=0.00019 Score=45.37 Aligned_cols=78 Identities=21% Similarity=0.226 Sum_probs=63.9
Q ss_pred cceecEEEcCCeEEEEEEcC-C--CCCCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccC
Q 033685 5 PNFINLTETPEAHVFKTDLP-G--LRKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMD 81 (113)
Q Consensus 5 ~p~~dv~e~~~~~~i~~~lp-G--~~~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~ 81 (113)
.|.+.|.++.+...|.+.+| | +..+++.|.+.. +.|.|...-. . +.-...|...|+++
T Consensus 7 ~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~-~~l~v~~kg~--------~----------~~~~~~L~~~I~~e 67 (131)
T 1wfi_A 7 GPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQR-RHLRVGLKGQ--------P----------PVVDGELYNEVKVE 67 (131)
T ss_dssp CCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEET-TEEEEEETTS--------C----------CSBCSCBSSCBCST
T ss_pred CCcEEEEecCCEEEEEEECCCCCcccccceEEEEeC-CEEEEEECCc--------e----------EEEecccccccccc
Confidence 57899999999999999999 6 889999999998 6999985310 0 11234588889999
Q ss_pred ceEEEEeCC-EEEEEEeCCCC
Q 033685 82 QIKASMESG-VLTVTVPKVEV 101 (113)
Q Consensus 82 ~i~A~~~~G-iL~I~~pk~~~ 101 (113)
.-.-++.+| .|.|+|.|..+
T Consensus 68 ~s~w~i~~~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 68 ESSWLIEDGKVVTVHLEKINK 88 (131)
T ss_dssp TCEEEEETTTEEEEEEEBSSS
T ss_pred cCEEEEcCCCEEEEEEEECCC
Confidence 989889888 89999999864
No 24
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.88 E-value=0.00019 Score=44.86 Aligned_cols=78 Identities=18% Similarity=0.182 Sum_probs=63.3
Q ss_pred cceecEEEcCCeEEEEEEcC-C--CCCCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccC
Q 033685 5 PNFINLTETPEAHVFKTDLP-G--LRKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMD 81 (113)
Q Consensus 5 ~p~~dv~e~~~~~~i~~~lp-G--~~~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~ 81 (113)
-|.+.+.++.+.+.|.+.+| | +..+++.|.+.. +.|.|...-. .+.-...|...|+++
T Consensus 16 ~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~-~~l~v~~kg~------------------~~~~~g~L~~~I~~d 76 (121)
T 3qor_A 16 LPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQR-RHLRVGLKGQ------------------PAIIDGELYNEVKVE 76 (121)
T ss_dssp CSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEET-TEEEEEETTS------------------CCSEEEEBSSCBCGG
T ss_pred CCCEEEEEccceEEEEEECCCCCcccccceEEEEEc-CEEEEEEcCc------------------ceEEecccccccccc
Confidence 46789999999999999999 5 788999999998 5898864210 011245688899999
Q ss_pred ceEEEEeCC-EEEEEEeCCCC
Q 033685 82 QIKASMESG-VLTVTVPKVEV 101 (113)
Q Consensus 82 ~i~A~~~~G-iL~I~~pk~~~ 101 (113)
...-++++| .|.|+|.|...
T Consensus 77 eS~w~i~~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 77 ESSWLIADGAVVTVHLEKINK 97 (121)
T ss_dssp GCEEEEETTTEEEEEEEBSSS
T ss_pred ccEEEEcCCCEEEEEEEECCC
Confidence 988899988 99999999854
No 25
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=97.88 E-value=0.0002 Score=45.34 Aligned_cols=76 Identities=11% Similarity=0.115 Sum_probs=61.2
Q ss_pred ecceecEEEcCCeEEEEEEcC-CCCCCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCc
Q 033685 4 IPNFINLTETPEAHVFKTDLP-GLRKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQ 82 (113)
Q Consensus 4 ~~p~~dv~e~~~~~~i~~~lp-G~~~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~ 82 (113)
..|.+.+.++.+.+.|.+.+| |+..+++.|.+.. +.|.|.+. +. . .-...|...|+++.
T Consensus 3 ~~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~-~~l~v~~~--------g~----------~-~~~~~L~~~I~~e~ 62 (131)
T 2o30_A 3 SEAKYTWDQELNEINIQFPVTGDADSSAIKIRMVG-KKICVKNQ--------GE----------I-VIDGELLHEVDVSS 62 (131)
T ss_dssp --CCCEEEEETTEEEEEEECC---CCSCEEEEEET-TEEEEEET--------TE----------E-EEEEEBSSCEEEEE
T ss_pred CCCcEEEEecCCEEEEEEECCCCCCccceEEEEEC-CEEEEEEC--------CE----------e-eEcccccccccccc
Confidence 468899999999999999997 8999999999998 69999852 10 1 13457888999998
Q ss_pred eEEEEeCCEEEEEEeCC
Q 033685 83 IKASMESGVLTVTVPKV 99 (113)
Q Consensus 83 i~A~~~~GiL~I~~pk~ 99 (113)
-.-++.++-|.|+|.|.
T Consensus 63 S~w~i~~~kv~i~L~K~ 79 (131)
T 2o30_A 63 LWWVINGDVVDVNVTKK 79 (131)
T ss_dssp EEEEEETTEEEEEEEES
T ss_pred CEEEEeCCEEEEEEEEC
Confidence 88888999999999997
No 26
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=97.75 E-value=1.2e-05 Score=51.31 Aligned_cols=86 Identities=8% Similarity=0.169 Sum_probs=59.9
Q ss_pred eecceecEEEcCCe-------EEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECC
Q 033685 3 LIPNFINLTETPEA-------HVFKTDLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLP 75 (113)
Q Consensus 3 ~~~p~~dv~e~~~~-------~~i~~~lpG~~~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP 75 (113)
...|.+++.++.+. +.|.+.+|++. ++.|.+.. +.|.+++.........+ ...|.-.+.|.
T Consensus 4 ~~~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~-~~l~~~~~~~~~~g~~~---------~~~y~~~l~L~ 71 (134)
T 2cg9_X 4 VINPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKP-SYIELKAQSKPHVGDEN---------VHHYQLHIDLY 71 (134)
T ss_dssp -------CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCS-SEEEECCEEC----------------CEEBCEEEECS
T ss_pred ccCCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEEC-CEEEEEEecccccCCcc---------CceEEEEEECh
Confidence 35788999999877 99999999974 78888888 69999866421000000 12366788999
Q ss_pred CCcccCceEEEEeCCE-EEEEEeCCC
Q 033685 76 ENVKMDQIKASMESGV-LTVTVPKVE 100 (113)
Q Consensus 76 ~~vd~~~i~A~~~~Gi-L~I~~pk~~ 100 (113)
..|+++..+.++.++. +.|+|.|+.
T Consensus 72 ~~Idpe~S~~~v~~~~~vei~L~K~~ 97 (134)
T 2cg9_X 72 KEIIPEKTMHKVANGQHYFLKLYKKD 97 (134)
T ss_dssp SCCCSSSEEEEECCC--CEEEEEECS
T ss_pred hhccccccEEEECCCEEEEEEEEECC
Confidence 9999999999999888 999999986
No 27
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.69 E-value=0.00094 Score=43.54 Aligned_cols=78 Identities=13% Similarity=0.194 Sum_probs=64.8
Q ss_pred ecceecEEEcCCeEEEEEEcC-CCCCCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCc
Q 033685 4 IPNFINLTETPEAHVFKTDLP-GLRKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQ 82 (113)
Q Consensus 4 ~~p~~dv~e~~~~~~i~~~lp-G~~~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~ 82 (113)
..|.+.|.++.+.+.|.+.|| |+..+++.|.+.. +.|.|... +. .+ -...|...|+++.
T Consensus 12 ~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~-~~L~v~~k--------g~----------~~-l~g~L~~~I~~ee 71 (157)
T 2rh0_A 12 GTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQS-RHVALAVG--------GR----------EI-LKGKLFDSTIADE 71 (157)
T ss_dssp ECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECS-SEEEEEET--------TE----------EE-EEEEBSSCBCGGG
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccceEEEEec-CEEEEEEC--------CE----------EE-EeeccccccCccc
Confidence 457899999999999999998 8899999999998 69999852 10 11 3467899999999
Q ss_pred eEEEEeCCE-EEEEEeCCCC
Q 033685 83 IKASMESGV-LTVTVPKVEV 101 (113)
Q Consensus 83 i~A~~~~Gi-L~I~~pk~~~ 101 (113)
-.-++.++- |.|+|.|..+
T Consensus 72 S~w~i~~~k~v~I~L~K~~~ 91 (157)
T 2rh0_A 72 GTWTLEDRKMVRIVLTKTKR 91 (157)
T ss_dssp CEEEEECCCEEEEEEEBSSC
T ss_pred cEEEEcCCcEEEEEEEEcCC
Confidence 898998874 9999999865
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=90.44 E-value=0.83 Score=26.12 Aligned_cols=33 Identities=12% Similarity=0.257 Sum_probs=29.2
Q ss_pred eEEEEEECCCCcccCceEEEEeCCEEEEEEeCCC
Q 033685 67 MFSRRFRLPENVKMDQIKASMESGVLTVTVPKVE 100 (113)
Q Consensus 67 ~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~pk~~ 100 (113)
.|.-.+.|| +++++.|+.++++|.|+|.--+..
T Consensus 8 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 8 RWRVSLDVN-HFAPDELTVKTKDGVVEITGKHAA 40 (85)
T ss_dssp EEEEEEECT-TTCCSEEEEEEETTEEEEEEEEC-
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 588899999 899999999999999999988654
No 29
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=87.72 E-value=1.2 Score=25.61 Aligned_cols=32 Identities=16% Similarity=0.227 Sum_probs=28.7
Q ss_pred eEEEEEECCCCcccCceEEEEeCCEEEEEEeCC
Q 033685 67 MFSRRFRLPENVKMDQIKASMESGVLTVTVPKV 99 (113)
Q Consensus 67 ~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~pk~ 99 (113)
.|.-.+.|| +++.+.++.++.++.|+|.--+.
T Consensus 7 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 38 (90)
T 2y1y_A 7 RFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHE 38 (90)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEEEEEe
Confidence 477899999 89999999999999999998764
No 30
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=87.32 E-value=1.4 Score=26.27 Aligned_cols=32 Identities=3% Similarity=0.109 Sum_probs=28.6
Q ss_pred eEEEEEECCCCcccCceEEEEeCCEEEEEEeCC
Q 033685 67 MFSRRFRLPENVKMDQIKASMESGVLTVTVPKV 99 (113)
Q Consensus 67 ~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~pk~ 99 (113)
.|.-.+.|| +++.+.++.++++|.|+|.-.+.
T Consensus 13 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 44 (106)
T 3l1e_A 13 KFVIFLDVK-HFSPEDLTVKVQEDFVEIHGKHN 44 (106)
T ss_dssp EEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEc
Confidence 588899999 89999999999999999998653
No 31
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=86.49 E-value=1.5 Score=25.89 Aligned_cols=33 Identities=15% Similarity=0.203 Sum_probs=29.2
Q ss_pred eEEEEEECCCCcccCceEEEEeCCEEEEEEeCCC
Q 033685 67 MFSRRFRLPENVKMDQIKASMESGVLTVTVPKVE 100 (113)
Q Consensus 67 ~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~pk~~ 100 (113)
.|.-.+.|| +++.+.++.++++|.|+|.--+..
T Consensus 12 ~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 44 (101)
T 2wj5_A 12 YFSVLLDVK-HFSPEEISVKVVGDHVEVHARHEE 44 (101)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 477889999 899999999999999999988653
No 32
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=86.08 E-value=1.8 Score=25.14 Aligned_cols=33 Identities=24% Similarity=0.431 Sum_probs=29.0
Q ss_pred eEEEEEECCCCcccCceEEEEeCCEEEEEEeCCC
Q 033685 67 MFSRRFRLPENVKMDQIKASMESGVLTVTVPKVE 100 (113)
Q Consensus 67 ~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~pk~~ 100 (113)
.|.-.+.|| +++.++++.+++++.|+|.-.+..
T Consensus 15 ~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~~ 47 (100)
T 3gla_A 15 HFVLYADLP-GIDPSQIEVQMDKGILSIRGERKS 47 (100)
T ss_dssp EEEEEEECT-TSCGGGCEEEEETTEEEEEEEECC
T ss_pred EEEEEEECC-CCCHHHEEEEEECCEEEEEEEEcC
Confidence 577789999 799999999999999999987654
No 33
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=84.78 E-value=4.3 Score=25.86 Aligned_cols=34 Identities=15% Similarity=0.158 Sum_probs=30.0
Q ss_pred eeEEEEEECCCCcccCceEEEEeCCEEEEEEeCCC
Q 033685 66 GMFSRRFRLPENVKMDQIKASMESGVLTVTVPKVE 100 (113)
Q Consensus 66 ~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~pk~~ 100 (113)
..|.-.+.|| +++.+.|+.++++|.|+|+-.+..
T Consensus 66 ~~~~v~~dlP-G~~~edi~V~~~~~~L~I~g~~~~ 99 (161)
T 4eld_A 66 QHIKVIAWLP-GVNKEDIILNAVGDTLEIRAKRSP 99 (161)
T ss_dssp SEEEEEEECT-TCCGGGEEEEEETTEEEEEEECCC
T ss_pred CEEEEEEECC-CCChHhEEEEEECCEEEEEEEEcc
Confidence 3577889999 789999999999999999998775
No 34
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=83.27 E-value=3.7 Score=24.86 Aligned_cols=35 Identities=17% Similarity=0.225 Sum_probs=30.6
Q ss_pred eeEEEEEECCCCcccCceEEEEeC-CEEEEEEeCCCC
Q 033685 66 GMFSRRFRLPENVKMDQIKASMES-GVLTVTVPKVEV 101 (113)
Q Consensus 66 ~~f~r~~~lP~~vd~~~i~A~~~~-GiL~I~~pk~~~ 101 (113)
..|.-.+.|| +++.+.++.++.+ +.|+|+.-+...
T Consensus 34 ~~~~v~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 34 GYLVVVADLA-GFNKEKIKARVSGQNELIIEAEREIT 69 (123)
T ss_dssp TEEEEEEECC-SCCGGGCEEEEETTTEEEEEEECCCC
T ss_pred CEEEEEEECC-CCCHHHEEEEEeCCCEEEEEEEEecc
Confidence 3577889999 7999999999999 999999987654
No 35
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=82.09 E-value=3.8 Score=24.00 Aligned_cols=34 Identities=15% Similarity=0.140 Sum_probs=27.9
Q ss_pred eEEEEEEcC-CCCCCCEEEEEeCCcEEEEEEEEecc
Q 033685 16 AHVFKTDLP-GLRKEEVKVEVEDDRVLQISGQRNIE 50 (113)
Q Consensus 16 ~~~i~~~lp-G~~~~~i~v~v~~~~~L~I~~~~~~~ 50 (113)
.|.-.+.|| +++.+.++-.+.+| .|.|+..+...
T Consensus 62 ~f~R~~~LP~~vd~~~i~A~~~~G-vL~I~lpK~~~ 96 (102)
T 4fei_A 62 RFVRELAFPEPVRPASGVASLAGG-VLTVRFEKLRP 96 (102)
T ss_dssp EEEEEEECSSCBCTTCCEEEEETT-EEEEEEEBSSC
T ss_pred EEEEEEECCCCcchhHcEEEEECC-EEEEEEEccCc
Confidence 455578899 68999999999985 99999877544
No 36
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=76.39 E-value=9.8 Score=23.95 Aligned_cols=34 Identities=24% Similarity=0.383 Sum_probs=28.9
Q ss_pred eEEEEEECCCCcccCceEEEE-eCCEEEEEEeCCCC
Q 033685 67 MFSRRFRLPENVKMDQIKASM-ESGVLTVTVPKVEV 101 (113)
Q Consensus 67 ~f~r~~~lP~~vd~~~i~A~~-~~GiL~I~~pk~~~ 101 (113)
.|.-.+.|| +++.+.++.++ +++.|+|+--+...
T Consensus 54 ~~~v~~dlP-Gv~kedI~V~v~~~~~L~I~g~~~~~ 88 (151)
T 1gme_A 54 AHVFKADLP-GVKKEEVKVEVEDGNVLVVSGERTKE 88 (151)
T ss_dssp EEEEEEECT-TCCGGGEEEEEETTTEEEEEECCCCC
T ss_pred EEEEEEECC-CCChHHEEEEEecCCEEEEEEEEccc
Confidence 577789999 89999999999 46799999987654
No 37
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=76.38 E-value=4.1 Score=26.57 Aligned_cols=33 Identities=15% Similarity=0.221 Sum_probs=29.2
Q ss_pred eeEEEEEECCCCcccCceEEEEeCCEEEEEEeCC
Q 033685 66 GMFSRRFRLPENVKMDQIKASMESGVLTVTVPKV 99 (113)
Q Consensus 66 ~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~pk~ 99 (113)
..|.-.+.|| +++.+.|+.++.+|.|+|.-.+.
T Consensus 73 d~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~ 105 (175)
T 2klr_A 73 DRFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHE 105 (175)
T ss_dssp SEEEEEECCS-SCCGGGEEEEEETTEEEEEEEEE
T ss_pred CeEEEEEECC-CCChHHEEEEEECCEEEEEEEEc
Confidence 3588899999 89999999999999999998764
No 38
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=60.42 E-value=14 Score=20.51 Aligned_cols=15 Identities=33% Similarity=0.412 Sum_probs=11.9
Q ss_pred CceEEEEeCCEEEEE
Q 033685 81 DQIKASMESGVLTVT 95 (113)
Q Consensus 81 ~~i~A~~~~GiL~I~ 95 (113)
..|.|.|+||+|.-.
T Consensus 3 k~IeAiYEnGVfkPL 17 (69)
T 2nwt_A 3 KIIEAVYENGVFKPL 17 (69)
T ss_dssp CCEEEEEETTEEEES
T ss_pred ceEEEEEECCEEeEC
Confidence 458999999988643
No 39
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=57.90 E-value=21 Score=21.00 Aligned_cols=19 Identities=26% Similarity=0.576 Sum_probs=15.5
Q ss_pred CCCEEEEEeCCcEEEEEEEE
Q 033685 28 KEEVKVEVEDDRVLQISGQR 47 (113)
Q Consensus 28 ~~~i~v~v~~~~~L~I~~~~ 47 (113)
++.++|.+++ +.++|+|.+
T Consensus 20 P~gV~V~i~~-~~VtVKGPk 38 (100)
T 2cql_A 20 PENVDITLKG-RTVIVKGPR 38 (100)
T ss_dssp CSSCEEEEET-TEEEEEETT
T ss_pred CCCCEEEEeC-CEEEEECCC
Confidence 4678999998 699999764
No 40
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=56.74 E-value=32 Score=22.41 Aligned_cols=45 Identities=29% Similarity=0.549 Sum_probs=30.8
Q ss_pred CCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCceEEEEeCCEEEEEEeC
Q 033685 28 KEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGVLTVTVPK 98 (113)
Q Consensus 28 ~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~pk 98 (113)
++.++|++++ +.++|+|.. |...+.| |.. +....+|+.|.+..+.
T Consensus 11 P~gV~V~i~~-~~VtVkGpk------------------G~L~~~~--~~~-----v~i~~~~~~l~v~~~~ 55 (177)
T 1rl6_A 11 PAGVTVTVNG-NTVTVKGPK------------------GELTRTF--HPD-----MTITVEGNVITVTRPS 55 (177)
T ss_dssp CTTCEEEEET-TEEEEEETT------------------EEEEEEC--CTT-----CEEEEETTEEEEECSC
T ss_pred CCCCEEEEeC-CEEEEECCC------------------eEEEEEc--CCC-----EEEEEeCCEEEEEcCC
Confidence 4678899987 699999763 4444444 533 4556789988877554
No 41
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=55.45 E-value=44 Score=22.51 Aligned_cols=46 Identities=20% Similarity=0.397 Sum_probs=31.1
Q ss_pred CCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCceEEEEeCCEEEEEEeCC
Q 033685 28 KEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGVLTVTVPKV 99 (113)
Q Consensus 28 ~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~pk~ 99 (113)
++.++|++++ +.++|+|.. |...+.| +. .+....+|+.|.+..+..
T Consensus 39 P~gV~V~i~~-~~VtVKGPk------------------G~L~~~~--~~-----~v~i~~e~~~i~v~~~~~ 84 (212)
T 1nkw_E 39 PSGVTVNAQD-GVFKVKGPK------------------GELTVPY--NT-----ELTVRQDGDQLLVERPSD 84 (212)
T ss_pred CCCcEEEEeC-CEEEEECCC------------------EEEEEEC--CC-----CeEEEEECCEEEEEcCCC
Confidence 5678899987 699999764 3444444 43 345567899888876543
No 42
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=51.48 E-value=31 Score=22.63 Aligned_cols=45 Identities=29% Similarity=0.465 Sum_probs=29.1
Q ss_pred CCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCceEEEEeCCEEEEEEe
Q 033685 28 KEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGVLTVTVP 97 (113)
Q Consensus 28 ~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~p 97 (113)
++.++|++++ +.++|+|.+ |...+.|.-| . ++.+.+++.|.+..+
T Consensus 14 P~gV~v~i~~-~~V~VkGpk------------------G~L~~~~~~~-~-----v~i~~~~~~l~v~~~ 58 (184)
T 3j21_F 14 PEGVEVTVEG-YKVKVKGPK------------------GELEREFFWP-G-----IQIFTEDGNVVIYKD 58 (184)
T ss_dssp CSSCEEEESS-SEEEEECSS------------------CEEEEECCCT-T-----CEEEEETTEEEEECS
T ss_pred CCCcEEEEeC-CEEEEEcCC------------------eEEEEEecCC-c-----EEEEEeCCEEEEEEC
Confidence 4678999987 699999653 3444444212 2 445578888887643
No 43
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=50.86 E-value=39 Score=20.48 Aligned_cols=31 Identities=16% Similarity=0.190 Sum_probs=24.1
Q ss_pred eEEEEEECCCCcccCceEEEEeCCEEEEEEe
Q 033685 67 MFSRRFRLPENVKMDQIKASMESGVLTVTVP 97 (113)
Q Consensus 67 ~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~p 97 (113)
...-+|.||.+++.+++.+.+...-|.|.+.
T Consensus 15 ~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~ 45 (131)
T 2o30_A 15 EINIQFPVTGDADSSAIKIRMVGKKICVKNQ 45 (131)
T ss_dssp EEEEEEECC---CCSCEEEEEETTEEEEEET
T ss_pred EEEEEEECCCCCCccceEEEEECCEEEEEEC
Confidence 4566889999999999999999999999873
No 44
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=50.04 E-value=10 Score=22.69 Aligned_cols=17 Identities=35% Similarity=0.636 Sum_probs=14.7
Q ss_pred ceEEEEeCCEEEEEEeC
Q 033685 82 QIKASMESGVLTVTVPK 98 (113)
Q Consensus 82 ~i~A~~~~GiL~I~~pk 98 (113)
.+.+.+.+|+|+|.++.
T Consensus 29 d~D~e~~~gVLti~f~~ 45 (106)
T 1ew4_A 29 DIDCEINGGVLTITFEN 45 (106)
T ss_dssp CCEEEEETTEEEEECTT
T ss_pred CEeeeccCCEEEEEECC
Confidence 47888999999999973
No 45
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=48.91 E-value=43 Score=21.86 Aligned_cols=46 Identities=20% Similarity=0.389 Sum_probs=30.5
Q ss_pred CCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCceEEEEeCCEEEEEEeC
Q 033685 28 KEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGVLTVTVPK 98 (113)
Q Consensus 28 ~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~pk 98 (113)
++.++|++++ +.++|+|.+ |...+.|. +. .+....++|.|.+..+.
T Consensus 9 P~gV~v~i~~-~~vtVkGpk------------------G~L~~~~~-~~-----~v~i~~~~~~i~v~~~~ 54 (178)
T 1vq8_E 9 PEDVDAEQDH-LDITVEGDN------------------GSVTRRLW-YP-----DIDVSVDGDTVVIESDE 54 (178)
T ss_dssp CTTCEEEEET-TEEEEEETT------------------EEEEEECC-CT-----TCEEEEETTEEEEECSC
T ss_pred CCCCEEEEeC-CEEEEECCC------------------eEEEEEEE-CC-----eEEEEEECCEEEEEcCC
Confidence 3678899987 699999763 34444442 33 34556789988877554
No 46
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=47.02 E-value=33 Score=20.58 Aligned_cols=32 Identities=22% Similarity=0.345 Sum_probs=27.1
Q ss_pred eeEEEEEECCCCc-ccCceEEEEeCCEEEEEEe
Q 033685 66 GMFSRRFRLPENV-KMDQIKASMESGVLTVTVP 97 (113)
Q Consensus 66 ~~f~r~~~lP~~v-d~~~i~A~~~~GiL~I~~p 97 (113)
....-+|.||..+ +.+++.+.+...-|.+.+.
T Consensus 29 ~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~ 61 (124)
T 1wgv_A 29 TDLEVRVPVPKHVVKGKQVSVALSSSSIRVAML 61 (124)
T ss_dssp TEEEEEEECCTTCCSGGGEEEEECSSEEEEEEE
T ss_pred cEEEEEEEcCCCCCchhheEEEEEcCEEEEEEE
Confidence 3466789999888 8999999999999999884
No 47
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus}
Probab=45.11 E-value=40 Score=22.83 Aligned_cols=44 Identities=27% Similarity=0.353 Sum_probs=26.2
Q ss_pred EEEeCCcEEEEEEEEec--cccCCCCcEEE---eeeeeeeEEEEEECCCC
Q 033685 33 VEVEDDRVLQISGQRNI--EKEDKNDTWHR---VERSSGMFSRRFRLPEN 77 (113)
Q Consensus 33 v~v~~~~~L~I~~~~~~--~~~~~~~~~~~---~e~~~~~f~r~~~lP~~ 77 (113)
+.+.+| .|.|++.+.. ...-..+.+.. ....+|+|+-.++||..
T Consensus 49 v~v~~G-~L~i~~~~~~~~~~~~tS~~i~t~~~~~~~yG~~e~r~k~p~g 97 (251)
T 3iln_A 49 ARVGGG-VLIIEARRESYEGREYTSARLVTRGKASWTYGRFEIRARLPSG 97 (251)
T ss_dssp EEEETT-EEEEEEEEEEETTEEEEECEEECTTTCCBSSEEEEEEEECCCS
T ss_pred EEEECC-EEEEEEEeccCCCCCEEEEEEEECCcccccceEEEEEEEccCC
Confidence 455675 9999997753 11111122222 13457889999999964
No 48
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=44.12 E-value=50 Score=19.76 Aligned_cols=38 Identities=8% Similarity=0.183 Sum_probs=28.7
Q ss_pred EEEcCCeEEEEEEc-CCCCCCCEEEEEeCCcEEEEEEEEec
Q 033685 10 LTETPEAHVFKTDL-PGLRKEEVKVEVEDDRVLQISGQRNI 49 (113)
Q Consensus 10 v~e~~~~~~i~~~l-pG~~~~~i~v~v~~~~~L~I~~~~~~ 49 (113)
+.+.++.+.|.+.+ ||.+++.|. .+.+ ..|.|.-....
T Consensus 8 ~~~~~~~v~l~v~V~P~A~r~~I~-g~~~-~~LkV~v~ApP 46 (108)
T 1n91_A 8 VTVNDDGLVLRLYIQPKASRDSIV-GLHG-DEVKVAITAPP 46 (108)
T ss_dssp EEECSSEEEEEEEEECSSSSCEEE-EECS-SCEEEECCCCS
T ss_pred EEECCCeEEEEEEEeeCCCcceee-cccC-CEEEEEEecCC
Confidence 56678899999998 899988874 4666 48888866544
No 49
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=42.30 E-value=79 Score=21.50 Aligned_cols=70 Identities=10% Similarity=0.109 Sum_probs=42.5
Q ss_pred EEEEEE---cCCCCCCCEEEEEeC-CcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCceEEEEeCCEE
Q 033685 17 HVFKTD---LPGLRKEEVKVEVED-DRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGVL 92 (113)
Q Consensus 17 ~~i~~~---lpG~~~~~i~v~v~~-~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~A~~~~GiL 92 (113)
|.+.++ |||+..+=--+.... ++.|.+.... ...++..... |.+.+.++|...-|.+.|... .+|.+
T Consensus 13 y~~~~~~~~l~g~~~~lSGla~~~~~~~L~aV~d~-------~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~-~~g~~ 83 (255)
T 3qqz_A 13 YHATIDGKEIAGITNNISSLTWSAQSNTLFSTINK-------PAAIVEMTTN-GDLIRTIPLDFVKDLETIEYI-GDNQF 83 (255)
T ss_dssp CEEEEEEEECTTCCSCEEEEEEETTTTEEEEEEET-------TEEEEEEETT-CCEEEEEECSSCSSEEEEEEC-STTEE
T ss_pred eEEEEeceECCCcccCcceeEEeCCCCEEEEEECC-------CCeEEEEeCC-CCEEEEEecCCCCChHHeEEe-CCCEE
Confidence 455554 899987533366662 3577765332 2234444444 789999999876788877643 56655
Q ss_pred EEE
Q 033685 93 TVT 95 (113)
Q Consensus 93 ~I~ 95 (113)
.|.
T Consensus 84 ~vs 86 (255)
T 3qqz_A 84 VIS 86 (255)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 50
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=40.60 E-value=24 Score=21.70 Aligned_cols=16 Identities=25% Similarity=0.590 Sum_probs=14.2
Q ss_pred eEEEEeCCEEEEEEeC
Q 033685 83 IKASMESGVLTVTVPK 98 (113)
Q Consensus 83 i~A~~~~GiL~I~~pk 98 (113)
+.+.+.+|+|+|.++.
T Consensus 49 ~Dve~~~gVLti~f~~ 64 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPA 64 (123)
T ss_dssp CEEEECSSEEEEECTT
T ss_pred eEEEccCCEEEEEECC
Confidence 6888999999999974
No 51
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=40.10 E-value=75 Score=20.67 Aligned_cols=44 Identities=25% Similarity=0.473 Sum_probs=29.7
Q ss_pred CCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCceEEEEeCCEEEEEEe
Q 033685 28 KEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGVLTVTVP 97 (113)
Q Consensus 28 ~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~p 97 (113)
++.++|++++ +.++|+|.+ |...+. |+.. +..+.+++.|.|..+
T Consensus 12 P~gV~v~i~~-~~v~VkGpk------------------G~L~~~--~~~~-----v~i~~~~~~l~v~~~ 55 (180)
T 3v2d_H 12 PKGVSVEVAP-GRVKVKGPK------------------GELEVP--VSPE-----MRVVVEEGVVRVERP 55 (180)
T ss_dssp CTTCEEEEET-TEEEEECSS------------------CEEEEE--CCTT-----SEEEEETTEEEEECS
T ss_pred CCCcEEEEeC-CEEEEEeCC------------------cEEEEE--eCCC-----EEEEEECCEEEEEEC
Confidence 5788999987 699999653 344444 4533 444578898888743
No 52
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A
Probab=38.62 E-value=40 Score=22.59 Aligned_cols=45 Identities=9% Similarity=0.198 Sum_probs=26.3
Q ss_pred EEEeCCcEEEEEEEEeccccCCCCcEEEee---eeeeeEEEEEECCCC
Q 033685 33 VEVEDDRVLQISGQRNIEKEDKNDTWHRVE---RSSGMFSRRFRLPEN 77 (113)
Q Consensus 33 v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e---~~~~~f~r~~~lP~~ 77 (113)
+.+.+++.|.|++.+.....-....+.... ..+|.|+-.++||..
T Consensus 52 ~~v~~~G~L~I~~~~~~~~~~~S~~i~S~~~f~~~yG~~E~r~klp~g 99 (245)
T 2hyk_A 52 SALDGNGNLVITARQEADGGYTSARLTTQNKVQPQYGRVEASIQIPRG 99 (245)
T ss_dssp EEECSSSCEEEEEEECTTSCEEECEEECTTTCCCCSEEEEEEEECCCS
T ss_pred eEEecCCEEEEEEEecCCCCEEEEEEEccCcccccCCeEEEEEEcCCC
Confidence 345552489999887542111122233222 456889999999964
No 53
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=38.10 E-value=82 Score=20.71 Aligned_cols=46 Identities=24% Similarity=0.353 Sum_probs=30.1
Q ss_pred CCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCceEEEE--eCCEEEEEEeC
Q 033685 28 KEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASM--ESGVLTVTVPK 98 (113)
Q Consensus 28 ~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~A~~--~~GiL~I~~pk 98 (113)
++.++|++++ +.++|+|.+ |...+. ||. ..+..++ +++.|.|..+.
T Consensus 13 P~gV~v~i~~-~~V~VkGPk------------------G~L~~~--~~~----~~v~i~~~~~~~~l~v~~~~ 60 (190)
T 3iz5_F 13 PEGVTVQVAA-KVVTVEGPR------------------GKLTRN--FKH----LNLDFQLLEGGRKLQVDAWF 60 (190)
T ss_dssp CTTCEEEEET-TEEEEEETT------------------EEEEEE--CCC----TTEEEEEETTTTEEEEEESC
T ss_pred CCCCEEEEeC-CEEEEECCC------------------ceEEEE--ccC----CcEEEEEEcCCCEEEEEECC
Confidence 4678999987 699999764 344443 331 1245556 78888887653
No 54
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius}
Probab=35.17 E-value=99 Score=21.98 Aligned_cols=48 Identities=21% Similarity=0.340 Sum_probs=29.0
Q ss_pred CCCCEEEEEeCCcEEEEEEEEeccccC-CC---CcE-------EEe--eeeeeeEEEEEECCCC
Q 033685 27 RKEEVKVEVEDDRVLQISGQRNIEKED-KN---DTW-------HRV--ERSSGMFSRRFRLPEN 77 (113)
Q Consensus 27 ~~~~i~v~v~~~~~L~I~~~~~~~~~~-~~---~~~-------~~~--e~~~~~f~r~~~lP~~ 77 (113)
+++++.| .+| .|.|++.+...... .+ ..| ... ...+|.|+-.++||..
T Consensus 85 ~~~Nv~v--~dG-~L~I~a~~~~~~~~~~G~~~~~ytsasg~i~Sk~~~~~yG~~E~r~Klp~~ 145 (324)
T 4awd_A 85 KAENVSV--KKG-CLRIINTVLSPTEGLDGKPGDKYRLAGGAVASVKNQAHYGYYETRMKASLT 145 (324)
T ss_dssp CGGGEEE--ETT-EEEEECEEEEEEECGGGCBSSSEEEEECEEEESCCCBCSEEEEEEEECCSS
T ss_pred cchhEEE--ECC-EEEEEEEeCCCCcccCCcccccEEEEEEEEEECCccccCcEEEEEEECCCC
Confidence 3455544 575 99999988643110 01 122 222 2567899999999975
No 55
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=34.30 E-value=28 Score=21.57 Aligned_cols=17 Identities=41% Similarity=0.567 Sum_probs=14.7
Q ss_pred CceEEEEeCCEEEEEEe
Q 033685 81 DQIKASMESGVLTVTVP 97 (113)
Q Consensus 81 ~~i~A~~~~GiL~I~~p 97 (113)
..+.+.+.+|+|+|.++
T Consensus 40 ~d~D~e~~~gVLti~f~ 56 (129)
T 3t3l_A 40 EDYDVSFGSGVLTVKLG 56 (129)
T ss_dssp TTCEEEEETTEEEEECC
T ss_pred cceeeecCCCEEEEEEc
Confidence 45788899999999996
No 56
>2hbp_A Cytoskeleton assembly control protein SLA1; SHD1, NPFX(1,2)D, endocytosis, protein binding; NMR {Saccharomyces cerevisiae}
Probab=33.25 E-value=21 Score=19.72 Aligned_cols=30 Identities=7% Similarity=0.170 Sum_probs=25.0
Q ss_pred cEEEcCCeEEEEEEcCCCCCCCEEEEEeCC
Q 033685 9 NLTETPEAHVFKTDLPGLRKEEVKVEVEDD 38 (113)
Q Consensus 9 dv~e~~~~~~i~~~lpG~~~~~i~v~v~~~ 38 (113)
.|.+..+.|.+.+.+-|+....|.+.-.+|
T Consensus 7 tWtDrtG~F~VeA~flg~~dgki~LhK~nG 36 (68)
T 2hbp_A 7 LWVDRSGTFKVDAEFIGCAKGKIHLHKANG 36 (68)
T ss_dssp EEEBSSSCCEEEEEEEEEETTEEEEECTTS
T ss_pred EEEcCCCCeEEEEEEEEEeCCEEEEEecCC
Confidence 466778899999999999888888887775
No 57
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=28.51 E-value=1.2e+02 Score=19.84 Aligned_cols=52 Identities=19% Similarity=0.228 Sum_probs=31.9
Q ss_pred EcCCCCCCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCceEEEEeCCE---EEEEEeC
Q 033685 22 DLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGV---LTVTVPK 98 (113)
Q Consensus 22 ~lpG~~~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~A~~~~Gi---L~I~~pk 98 (113)
..|=-=++.++|++.+ +.++|+|.. |...+ .||.. .+....++|. |.+..+.
T Consensus 7 k~pI~IP~gV~V~i~~-~~VtVkGpk------------------G~L~~--~~~~~----~v~i~~~~~~~~~i~v~~~~ 61 (192)
T 2zkr_e 7 NQTVDIPENVDITLKG-RTVIVKGPR------------------GTLRR--DFNHI----NVELSLLGKKKKRLRVDKWW 61 (192)
T ss_dssp ---CCCCTTCEEEEET-TEEEEEETT------------------EEEEE--ECCSS----SCEEEEETTTTCEEEEECSC
T ss_pred cCcEEcCCCCEEEEeC-CEEEEECCC------------------eEEEE--EeCCC----CEEEEEecCceeEEEEEcCC
Confidence 3444446789999998 699999764 34434 44431 3455677887 7776553
No 58
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=27.73 E-value=1.2e+02 Score=19.08 Aligned_cols=32 Identities=13% Similarity=0.251 Sum_probs=27.2
Q ss_pred eeEEEEEECCCCcccCceEEEEeCCEEEEEEe
Q 033685 66 GMFSRRFRLPENVKMDQIKASMESGVLTVTVP 97 (113)
Q Consensus 66 ~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~p 97 (113)
....-+|.||..+....+.+.+...-|.|.+.
T Consensus 23 ~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k 54 (157)
T 2rh0_A 23 EEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG 54 (157)
T ss_dssp SEEEEEEECCTTCCGGGEEEEECSSEEEEEET
T ss_pred CEEEEEEECCCCCcccceEEEEecCEEEEEEC
Confidence 34667899999999999999999999999874
No 59
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=27.71 E-value=96 Score=25.75 Aligned_cols=89 Identities=13% Similarity=0.275 Sum_probs=50.9
Q ss_pred eecEEEcCCeEEEEEEc----------CCCCCCCEEEEEeCCcEEEEEEEE---eccccCCCCcEEEeeeeeeeEEEE-E
Q 033685 7 FINLTETPEAHVFKTDL----------PGLRKEEVKVEVEDDRVLQISGQR---NIEKEDKNDTWHRVERSSGMFSRR-F 72 (113)
Q Consensus 7 ~~dv~e~~~~~~i~~~l----------pG~~~~~i~v~v~~~~~L~I~~~~---~~~~~~~~~~~~~~e~~~~~f~r~-~ 72 (113)
.+.|++.++.|.+++.+ |||+..-|+|.+..+.. |.. .-..-..+..|...=+-.|.|... +
T Consensus 810 ~~~v~~~~~~~~~~~~~~~~~~npw~~~gfs~q~~~iy~~~~~~----g~~~~l~~~~~~~~~~W~~~~~~~G~~~~~~~ 885 (1020)
T 1ulv_A 810 GVDVYDAGDDYAFVATIAGEVTNPWGGQAISHQRVNIYLGKGEG----GATPGLPGTNINLEHAWDSVIVTDGRFDGAGV 885 (1020)
T ss_dssp EEEEEEETTEEEEEEEESSCCCCTTCCSSCSSEEEEEEEECSCS----SCEECSGGGCCEESSCEEEEEEECCSTTCCEE
T ss_pred eeEEEEcCCEEEEEEEecccCCCCCCCCCcceeEEEEEEECCCC----CCcccCCcccCCCCCCccEEEEEeccCCCcce
Confidence 46889999999999998 68888889999986310 111 000111122333322222312222 4
Q ss_pred ECCCCcccCceEEE--EeCCEEEEEEeCC
Q 033685 73 RLPENVKMDQIKAS--MESGVLTVTVPKV 99 (113)
Q Consensus 73 ~lP~~vd~~~i~A~--~~~GiL~I~~pk~ 99 (113)
..|+.-....++.. -.+..+++.+||+
T Consensus 886 ~~~~g~~~~~~~v~~~~~~~~i~~~v~~~ 914 (1020)
T 1ulv_A 886 YAPDGTRTSAVSLLAVPEARQIVTRVPKA 914 (1020)
T ss_dssp ECTTSCEEECCEEEEETTTTEEEEEEEGG
T ss_pred ECCCCCcCCCceEEEecCCCEEEEEEcHH
Confidence 45665443333343 3588999999995
No 60
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A
Probab=27.61 E-value=94 Score=20.19 Aligned_cols=44 Identities=9% Similarity=0.156 Sum_probs=24.7
Q ss_pred EEEeCCcEEEEEEEEeccccCCCCcEEEe-eeeeeeEEEEEECCC
Q 033685 33 VEVEDDRVLQISGQRNIEKEDKNDTWHRV-ERSSGMFSRRFRLPE 76 (113)
Q Consensus 33 v~v~~~~~L~I~~~~~~~~~~~~~~~~~~-e~~~~~f~r~~~lP~ 76 (113)
+.+.+++.|.|++.+.....-..+.+... ...+|+|+-++++|.
T Consensus 39 v~v~~~G~L~i~~~~~~~~~~~s~~i~S~~~f~yG~~E~r~k~p~ 83 (214)
T 2ayh_A 39 VNFTNDGKLKLGLTSSAYNKFDCAEYRSTNIYGYGLYEVSMKPAK 83 (214)
T ss_dssp EEECTTSCEEEEEEEEETTEEEEEEEEESSCBCSEEEEEEEECCC
T ss_pred EEEcCCCEEEEEEecCCCCceeeEEEEECCeEeeEEEEEEEEcCC
Confidence 45566238999988654211111112211 135788999999985
No 61
>4gzv_A Hypothetical protein; AN eight-stranded beta barrel, lipocalin family, structural joint center for structural genomics, JCSG; 1.95A {Bacteroides ovatus}
Probab=27.50 E-value=1.2e+02 Score=19.11 Aligned_cols=73 Identities=16% Similarity=0.231 Sum_probs=43.9
Q ss_pred cceecEEEcCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCc-e
Q 033685 5 PNFINLTETPEAHVFKTDLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQ-I 83 (113)
Q Consensus 5 ~p~~dv~e~~~~~~i~~~lpG~~~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~-i 83 (113)
.|.+.|...|+.|.--+-+|+- +..++..|..+...+ ..|. -...+++.+|.....++ +
T Consensus 35 s~~~KIlS~DgtF~N~~m~~~~-----------~aiIt~yGtY~l~SD---~~Y~------E~i~kni~~p~~~g~~n~L 94 (142)
T 4gzv_A 35 SNTFKVLSDDGRIVNFTIIPGA-----------DAIITGYGTYKQLTD---DSYK------ESIEKNIHLPMLDNQDNIL 94 (142)
T ss_dssp EEEEEEECTTSEEEEEECCTTS-----------CCEEEEEEEEEEEET---TEEE------EEEEEESSSGGGTTEEEEE
T ss_pred cCceEEECCCCcEEEEEEeCCC-----------CcEEEEeEEEEecCC---Ceee------eeecccccCccccCCccEE
Confidence 5677888777777655545531 123344444333222 1111 24667888887776665 8
Q ss_pred EEEE-eCCEEEEEEe
Q 033685 84 KASM-ESGVLTVTVP 97 (113)
Q Consensus 84 ~A~~-~~GiL~I~~p 97 (113)
+-++ +|++|.+.+-
T Consensus 95 ~fe~~~dn~l~lsy~ 109 (142)
T 4gzv_A 95 EFEIKDNDYLHLKYF 109 (142)
T ss_dssp EEEEETTTEEEEEEE
T ss_pred EEEEccCCEEEEEEE
Confidence 8887 7889888884
No 62
>2k0r_A Thiol:disulfide interchange protein DSBD; immunoglobulin, mutant, N-terminal domain, disulfide bond reductase; NMR {Neisseria meningitidis serogroup B} PDB: 2k9f_B
Probab=27.29 E-value=1.1e+02 Score=18.61 Aligned_cols=32 Identities=6% Similarity=0.107 Sum_probs=22.1
Q ss_pred eecEEEcCCeEEEEEEcC-CC--CCCCEEEEEeCC
Q 033685 7 FINLTETPEAHVFKTDLP-GL--RKEEVKVEVEDD 38 (113)
Q Consensus 7 ~~dv~e~~~~~~i~~~lp-G~--~~~~i~v~v~~~ 38 (113)
.++....++.+.|+.+++ |+ -++.|++...++
T Consensus 16 ~~~~~~~~~~l~l~w~Ia~GyYLYrd~~~~~~~~~ 50 (128)
T 2k0r_A 16 VPELAVADDGVNVRFRIADGYYMYQAKIVGKTNPA 50 (128)
T ss_dssp EEEEEECSSEEEEEEEECTTEEEETTTCEEEEESS
T ss_pred eeeeEecCCEEEEEEEECCCcEEEccEEEEEeCCC
Confidence 345556667788888885 75 567888877654
No 63
>3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A
Probab=26.91 E-value=29 Score=26.47 Aligned_cols=28 Identities=11% Similarity=0.099 Sum_probs=21.6
Q ss_pred EEECCCCcccCceEEEEeCCEEEEEEeCC
Q 033685 71 RFRLPENVKMDQIKASMESGVLTVTVPKV 99 (113)
Q Consensus 71 ~~~lP~~vd~~~i~A~~~~GiL~I~~pk~ 99 (113)
++.=|+.|.+.. .+...+|.|+++||..
T Consensus 467 t~~~P~~V~p~~-~~~~~~~~~~~~lp~~ 494 (504)
T 3ug3_A 467 TMENPNVVDITS-ETITVDTEFEHTFKPF 494 (504)
T ss_dssp CSSCTTSSEEEE-EEEEECSEEEEEECTT
T ss_pred CCCCCCEEEeee-eeEecCCEEEEEECCC
Confidence 444577777776 6777899999999976
No 64
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=26.48 E-value=64 Score=16.58 Aligned_cols=22 Identities=23% Similarity=0.451 Sum_probs=17.6
Q ss_pred CCCCCEEEEEeCCcEEEEEEEEe
Q 033685 26 LRKEEVKVEVEDDRVLQISGQRN 48 (113)
Q Consensus 26 ~~~~~i~v~v~~~~~L~I~~~~~ 48 (113)
+.-++|.|..+++ .+++.|+..
T Consensus 30 lgyndinvtwdgd-tvtvegqle 51 (62)
T 2gjh_A 30 LGYNDINVTWDGD-TVTVEGQLE 51 (62)
T ss_dssp TTCCSCEEEECSS-CEEEEEECC
T ss_pred hCcccceeEEcCC-EEEEEeEEc
Confidence 3457899999985 999999864
No 65
>3jx8_A Putative lipoprotein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.16A {Parabacteroides distasonis atcc 8503}
Probab=26.02 E-value=62 Score=21.69 Aligned_cols=39 Identities=15% Similarity=0.153 Sum_probs=27.9
Q ss_pred ecEEEcCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEE
Q 033685 8 INLTETPEAHVFKTDLPGLRKEEVKVEVEDDRVLQISGQR 47 (113)
Q Consensus 8 ~dv~e~~~~~~i~~~lpG~~~~~i~v~v~~~~~L~I~~~~ 47 (113)
+.+...++.+.+++..+.--.+.|.+.+.+ +.|.|.-..
T Consensus 34 V~l~qgd~~~~V~i~~~~nl~~~i~~~v~~-g~L~I~~~~ 72 (250)
T 3jx8_A 34 FEYEQSDKAPYLSVTIDENLFDYLVTEVEG-GTLKIYPKS 72 (250)
T ss_dssp EEEEECSSCCEEEEEEEGGGGGGEEEEEET-TEEEEEECB
T ss_pred EEEEECCCCceEEEEECccccceEEEEEEC-CEEEEEEcC
Confidence 344444356777777776557899999998 599998654
No 66
>4i95_A Putative uncharacterized protein; lipocalin-like domain of PF13924 family, structural genomics center for structural genomics, JCSG; HET: MSE; 1.81A {Bacteroides eggerthii} PDB: 4gzv_A
Probab=25.68 E-value=1.3e+02 Score=18.91 Aligned_cols=70 Identities=17% Similarity=0.206 Sum_probs=42.9
Q ss_pred eecEEEcCCeEEEEEEcCCCCCCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCc-eEE
Q 033685 7 FINLTETPEAHVFKTDLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQ-IKA 85 (113)
Q Consensus 7 ~~dv~e~~~~~~i~~~lpG~~~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~-i~A 85 (113)
.+.|..+|+.|.--+-.|| .+-.++..|.....++. .| .-...+++.+|.....++ ++.
T Consensus 37 ~lKIlSdDgtF~Ni~m~~~-----------~~aiIt~~GtY~~~SD~---~Y------~E~IeKni~lp~l~g~~N~l~f 96 (142)
T 4i95_A 37 TFKVLSDDGRIVNFTIRPG-----------TDAIITGYGTYRQISAA---AY------KESIEKNIHLPMLDNKDNILEF 96 (142)
T ss_dssp EEEEECTTSEEEEEECCTT-----------SCCEEEEEEEEEEEETT---EE------EEEEEEESSSGGGTTEEEEEEE
T ss_pred cEEEEcCCCcEEEEEEecC-----------CCcEEEEeEEEEecCCc---ce------eeeecccccCcccCCCccEEEE
Confidence 5677777777666555553 12345555554433321 11 124667888887665555 888
Q ss_pred EE-eCCEEEEEE
Q 033685 86 SM-ESGVLTVTV 96 (113)
Q Consensus 86 ~~-~~GiL~I~~ 96 (113)
++ .||+|.|++
T Consensus 97 E~~~dnlm~lky 108 (142)
T 4i95_A 97 EMGAGGVMYLKY 108 (142)
T ss_dssp EECSTTEEEEEE
T ss_pred EEccCCEEEEEE
Confidence 88 788999998
No 67
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=25.14 E-value=1.1e+02 Score=18.09 Aligned_cols=34 Identities=12% Similarity=0.076 Sum_probs=28.2
Q ss_pred eeeEEEEEECCCC--cccCceEEEEeCCEEEEEEeC
Q 033685 65 SGMFSRRFRLPEN--VKMDQIKASMESGVLTVTVPK 98 (113)
Q Consensus 65 ~~~f~r~~~lP~~--vd~~~i~A~~~~GiL~I~~pk 98 (113)
.....-++.||.. ++...+.+.+...-|.|.+.-
T Consensus 25 ~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~kg 60 (121)
T 3qor_A 25 LSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKG 60 (121)
T ss_dssp SSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEETT
T ss_pred cceEEEEEECCCCCcccccceEEEEEcCEEEEEEcC
Confidence 3456678999988 899999999999999998863
No 68
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=24.94 E-value=1.7e+02 Score=20.08 Aligned_cols=43 Identities=16% Similarity=0.227 Sum_probs=27.9
Q ss_pred CCCCEEEEEeCCcEEEEEEEEeccccCCCCcEE-EeeeeeeeEEEEEECCCC
Q 033685 27 RKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWH-RVERSSGMFSRRFRLPEN 77 (113)
Q Consensus 27 ~~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~-~~e~~~~~f~r~~~lP~~ 77 (113)
.++++.| .+| .|.|++.+.. +..+. .....+|.|+-.++||..
T Consensus 31 ~~~Nv~v--~~G-~L~L~~~k~t-----sa~i~Sk~~~~yG~~Ear~Klp~g 74 (274)
T 2uwa_A 31 GPQHQRV--DQG-SLTIWLDSTS-----GSGFKSINRYRSGYFGANIKLQSG 74 (274)
T ss_dssp CGGGEEE--ETT-EEEEEECSSC-----CEEEEEEEEEEEEEEEEEEECCCS
T ss_pred CCCCEEE--ECC-EEEEEEecCC-----CCEEEECceEeeEEEEEEEEeCCC
Confidence 3556655 665 7999876431 22232 334678899999999965
No 69
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=24.78 E-value=1.2e+02 Score=18.35 Aligned_cols=28 Identities=25% Similarity=0.413 Sum_probs=18.1
Q ss_pred ceEEEE---eCCEEEEEEeCCCCCCCCeEEEEc
Q 033685 82 QIKASM---ESGVLTVTVPKVEVTKPDVKAIEI 111 (113)
Q Consensus 82 ~i~A~~---~~GiL~I~~pk~~~~~~~~~~I~I 111 (113)
.+..+| .||+|.|+.--.... ....|.|
T Consensus 99 ~IeVtf~iD~nGiL~V~a~d~~tg--~~~~i~i 129 (135)
T 1q5l_A 99 QIEVTFDIDADGILHVSAKDKNSG--KEQKITI 129 (135)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTC--CEEEEEE
T ss_pred EEEEEEEECCCCEEEEEEEECCCC--CEEEEEE
Confidence 577777 699999998643332 3345554
No 70
>1ip9_A BEM1 protein; ubiquitin alpha/beta roll, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 1ipg_A 2kfk_A
Probab=24.62 E-value=37 Score=19.53 Aligned_cols=24 Identities=13% Similarity=0.213 Sum_probs=17.1
Q ss_pred CCcccCceEEEEeCCEEEEEEeCC
Q 033685 76 ENVKMDQIKASMESGVLTVTVPKV 99 (113)
Q Consensus 76 ~~vd~~~i~A~~~~GiL~I~~pk~ 99 (113)
.....-+++..|+|+++.|++|..
T Consensus 8 pq~~~~KVK~yy~DDIiAIrvP~d 31 (85)
T 1ip9_A 8 SGLKTTKIKFYYKDDIFALMLKGD 31 (85)
T ss_dssp CCCCCEEEEECBTTCCEEEEECSC
T ss_pred CccCceEEEEEecCcEEEEECCCC
Confidence 344444566667899999999964
No 71
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=24.51 E-value=50 Score=18.22 Aligned_cols=22 Identities=27% Similarity=0.511 Sum_probs=17.9
Q ss_pred CCCCCCEEEEEeCCcEEEEEEEE
Q 033685 25 GLRKEEVKVEVEDDRVLQISGQR 47 (113)
Q Consensus 25 G~~~~~i~v~v~~~~~L~I~~~~ 47 (113)
-|+.+.|.+....| .|.|+|+.
T Consensus 17 sFd~e~i~L~T~~G-~L~IkG~~ 38 (71)
T 2ks0_A 17 SFDPKEILLETIQG-VLSIKGEK 38 (71)
T ss_dssp EECSSEEEEEETTE-EEEEEEEC
T ss_pred EECCCEEEEEeCce-EEEEEcCC
Confidence 35788888888884 99999985
No 72
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A
Probab=24.16 E-value=1.2e+02 Score=20.38 Aligned_cols=44 Identities=9% Similarity=0.092 Sum_probs=25.1
Q ss_pred EEEeCCcEEEEEEEEeccccCCCCcEEEe-eeeeeeEEEEEECCC
Q 033685 33 VEVEDDRVLQISGQRNIEKEDKNDTWHRV-ERSSGMFSRRFRLPE 76 (113)
Q Consensus 33 v~v~~~~~L~I~~~~~~~~~~~~~~~~~~-e~~~~~f~r~~~lP~ 76 (113)
+.+.+++.|.|++.+.....-....+... ...+|.|+-.+++|.
T Consensus 63 v~v~~~G~L~l~~~~~~~~~~ts~~i~S~~~~~yG~~e~r~K~p~ 107 (238)
T 3o5s_A 63 VSMTSLGEMRLALTSPAYNKFDCGENRSVQTYGYGLYEVRMKPAK 107 (238)
T ss_dssp EEECTTSCEEEEEEEEETTEEEEEEEEESSCBCSEEEEEEEECCC
T ss_pred EEEeCCCEEEEEEEeCCCCceeEEEEEEcCeEccEEEEEEEEeCC
Confidence 55666237999987754211111122221 246788999999884
No 73
>1nvp_C Transcription initiation factor IIA beta chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: b.56.1.1
Probab=23.52 E-value=36 Score=19.18 Aligned_cols=15 Identities=13% Similarity=0.456 Sum_probs=12.5
Q ss_pred cCceEEEEeCCEEEE
Q 033685 80 MDQIKASMESGVLTV 94 (113)
Q Consensus 80 ~~~i~A~~~~GiL~I 94 (113)
.++=++.+++|+|+|
T Consensus 46 KnkWKc~LKdGim~i 60 (76)
T 1nvp_C 46 KNKWKFHLKDGIMNL 60 (76)
T ss_dssp TTEEEEEEEEEEEEE
T ss_pred CceEEEEEeccEEEE
Confidence 456889999999987
No 74
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2
Probab=23.25 E-value=1.4e+02 Score=21.39 Aligned_cols=47 Identities=11% Similarity=0.056 Sum_probs=27.7
Q ss_pred CCCEEEEEeCCcEEEEEEEEeccc-cCCCCcEEEee-eeee-eEEEEEECCCC
Q 033685 28 KEEVKVEVEDDRVLQISGQRNIEK-EDKNDTWHRVE-RSSG-MFSRRFRLPEN 77 (113)
Q Consensus 28 ~~~i~v~v~~~~~L~I~~~~~~~~-~~~~~~~~~~e-~~~~-~f~r~~~lP~~ 77 (113)
++++ .+.+| .|.|++.+.... .-..+.+.... ..+| .|+-+++||..
T Consensus 104 ~~Nv--~v~dG-~L~I~a~~~~g~~~~tSg~i~Sk~~f~YGr~vEaRaKlp~g 153 (346)
T 1o4z_A 104 RDRS--YVADG-ELKMWATRKPGSDKINMGCITSKTRVVYPVYIEARAKVMNS 153 (346)
T ss_dssp GGGE--EEETT-EEEEECEECTTSSCEEECEEEESSCBCSSEEEEEEEECCSS
T ss_pred ccCE--EEECC-EEEEEEEecCCCCcEEeeEEEeCccEeCCeEEEEEEEecCC
Confidence 3454 45575 999999876421 11112222222 4678 59999999965
No 75
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=22.65 E-value=1.7e+02 Score=19.19 Aligned_cols=46 Identities=22% Similarity=0.546 Sum_probs=29.6
Q ss_pred CCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCceEEE-EeCCEEEEEEeC
Q 033685 28 KEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKAS-MESGVLTVTVPK 98 (113)
Q Consensus 28 ~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~A~-~~~GiL~I~~pk 98 (113)
++.++|++++ +.++|+|.+ |...+. |+. . .+..+ .+++.|.|..+.
T Consensus 13 P~gV~v~i~~-~~V~VkGPk------------------G~L~~~--~~~-~---~v~i~~~~~~~l~v~~~~ 59 (191)
T 3u5e_H 13 PEGVTVSIKS-RIVKVVGPR------------------GTLTKN--LKH-I---DVTFTKVNNQLIKVAVHN 59 (191)
T ss_dssp CTTCEEEEET-TEEEEEETT------------------EEEEEE--CTT-T---CCEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEeC-CEEEEEcCC------------------eEEEEE--ccC-C---cEEEEEecCCeEEEEECC
Confidence 5678999987 699999764 334443 442 1 23444 468888887653
No 76
>3rd4_A Uncharacterized protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, propen_03304, unknown function; 2.90A {Proteus penneri}
Probab=22.57 E-value=74 Score=18.82 Aligned_cols=25 Identities=8% Similarity=0.125 Sum_probs=19.3
Q ss_pred EcCCeEEEEEEcCCCCCCCEEEEEe
Q 033685 12 ETPEAHVFKTDLPGLRKEEVKVEVE 36 (113)
Q Consensus 12 e~~~~~~i~~~lpG~~~~~i~v~v~ 36 (113)
+++..|.|.+.||.-.-+.+++.+.
T Consensus 33 ~~~~~Y~itF~~p~~~G~~~ef~v~ 57 (100)
T 3rd4_A 33 EITHYYQVTFRLTTDDRKDLVLNID 57 (100)
T ss_dssp -CCCEEEEEEEESSSSCEEEEEECC
T ss_pred CCceEEEEEEEecCCCCCeEEEEEC
Confidence 5567999999998876677777776
No 77
>3cdw_H Protein 3B, VPG; RNA-dependent RNA polymerase, protein primer vizier viral enzymes involved in replication, transferase-V protein complex; 2.50A {Coxsackievirus B3} PDB: 2bbl_A 2bbp_A
Probab=22.46 E-value=48 Score=14.66 Aligned_cols=17 Identities=12% Similarity=0.378 Sum_probs=9.2
Q ss_pred eCCCCCCCCeEEEEcCC
Q 033685 97 PKVEVTKPDVKAIEISG 113 (113)
Q Consensus 97 pk~~~~~~~~~~I~I~~ 113 (113)
|+.....+.-|++.+||
T Consensus 7 p~~~~k~P~lR~a~vQG 23 (26)
T 3cdw_H 7 PNQKPRVPTLRQAKVQX 23 (26)
T ss_pred CcccCCCCeeEEEEEee
Confidence 44444444546666665
No 78
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=22.42 E-value=96 Score=18.41 Aligned_cols=26 Identities=15% Similarity=0.011 Sum_probs=14.4
Q ss_pred EEEEECCCCcccCceEEEEeCCEEEEEEeCC
Q 033685 69 SRRFRLPENVKMDQIKASMESGVLTVTVPKV 99 (113)
Q Consensus 69 ~r~~~lP~~vd~~~i~A~~~~GiL~I~~pk~ 99 (113)
.|++..| --++|.+++.+|.|.+.+.
T Consensus 22 ~RSI~~~-----iPi~A~id~~~L~I~F~~~ 47 (108)
T 3d33_A 22 IRSAATN-----CPITVFTDGYLLTLKNASP 47 (108)
T ss_dssp ------C-----CSEEEEEETTEEEEEESSC
T ss_pred ccccCCC-----CCcEEEEECCEEEEEECCc
Confidence 4666533 3367888888888888554
No 79
>3bqa_A Sensor protein PHOQ; histidine kinase sensor domain, ATP-binding, inner membrane, magnesium, membrane, metal-binding, nucleotide-binding; 2.00A {Escherichia coli} PDB: 3bq8_A 1yax_A
Probab=21.88 E-value=22 Score=22.53 Aligned_cols=15 Identities=33% Similarity=0.448 Sum_probs=13.4
Q ss_pred EEEeCCEEEEEEeCC
Q 033685 85 ASMESGVLTVTVPKV 99 (113)
Q Consensus 85 A~~~~GiL~I~~pk~ 99 (113)
|.++||.|.|.+|..
T Consensus 21 AqW~~nkl~I~~P~n 35 (148)
T 3bqa_A 21 AKWENNKLHVELPEN 35 (148)
T ss_dssp CEEETTEEECCCCHH
T ss_pred hhhcCCceeEeCCCc
Confidence 789999999999965
No 80
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus}
Probab=21.52 E-value=1.5e+02 Score=19.93 Aligned_cols=44 Identities=18% Similarity=0.275 Sum_probs=26.1
Q ss_pred EEEeCCcEEEEEEEEecccc-------CCCCcEEEe---eee-eeeEEEEEECCCC
Q 033685 33 VEVEDDRVLQISGQRNIEKE-------DKNDTWHRV---ERS-SGMFSRRFRLPEN 77 (113)
Q Consensus 33 v~v~~~~~L~I~~~~~~~~~-------~~~~~~~~~---e~~-~~~f~r~~~lP~~ 77 (113)
+.+.+| .|.|++.+..... -....+... ... +|.|+-.+.||..
T Consensus 59 ~~v~~G-~L~I~~~~~~~~~~~~G~~~~~S~~i~S~~~f~~~~yG~~E~r~klp~g 113 (264)
T 2vy0_A 59 TYIVNG-TLVIEARKEIITDPNEGTFLYTSSRLKTEGKVEFSPPVVVEARIKLPKG 113 (264)
T ss_dssp EEEETT-EEEEEEEEEEEEETTTEEEEEEECEEECTTTCEECSSEEEEEEEECCCS
T ss_pred eEecCC-EEEEEEEecccCCCCCCCccEEEEEEEecCcccccCCeEEEEEEEcCCC
Confidence 456775 9999998765221 011222222 223 6888888999864
No 81
>3r8s_G 50S ribosomal protein L6; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_E 1p86_E 2awb_G 2aw4_G 2i2v_G 2j28_G 2i2t_G* 2qao_G* 2qba_G* 2qbc_G* 2qbe_G 2qbg_G 2qbi_G* 2qbk_G* 2qov_G 2qox_G 2qoz_G* 2qp1_G* 2rdo_G 2vhm_G ...
Probab=20.54 E-value=55 Score=21.23 Aligned_cols=43 Identities=23% Similarity=0.446 Sum_probs=28.2
Q ss_pred CCCEEEEEeCCcEEEEEEEEeccccCCCCcEEEeeeeeeeEEEEEECCCCcccCceEEEEeCCEEEEEE
Q 033685 28 KEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGVLTVTV 96 (113)
Q Consensus 28 ~~~i~v~v~~~~~L~I~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~ 96 (113)
++.++|++++ +.++|+|.+ |...+. |+. .+..+.+++.|.|..
T Consensus 11 P~gV~v~i~~-~~V~VkGpk------------------G~L~~~--~~~-----~v~i~~~~~~l~v~~ 53 (176)
T 3r8s_G 11 PAGVDVKING-QVITIKGKN------------------GELTRT--LND-----AVEVKHADNTLTFGP 53 (176)
T ss_dssp CTTCCCEESS-SEEECCBTT------------------BCCEEE--CCS-----SCEEEEETTEEEEEC
T ss_pred CCCcEEEEeC-CEEEEEcCC------------------EEEEEE--CCC-----CEEEEEeCCEEEEEE
Confidence 4677888887 688888653 334444 453 345567889888873
No 82
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=20.02 E-value=82 Score=19.14 Aligned_cols=26 Identities=8% Similarity=0.091 Sum_probs=21.4
Q ss_pred cCCCCCCCEEEEEeCCcEEEEEEEEec
Q 033685 23 LPGLRKEEVKVEVEDDRVLQISGQRNI 49 (113)
Q Consensus 23 lpG~~~~~i~v~v~~~~~L~I~~~~~~ 49 (113)
.|...+-.|.|.+++| .++++|.-..
T Consensus 2 ~~~~~p~~i~V~v~~G-~VTLsG~Vp~ 27 (132)
T 2kgs_A 2 ASALSLSLLSISRSGN-TVTLIGDFPD 27 (132)
T ss_dssp CCCCCEEEEEEEECSS-EEEEEEEESC
T ss_pred CCcccceeEEEEEECC-EEEEEEECCC
Confidence 3666777899999985 9999999765
Done!