RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= 033685
         (113 letters)



>d1gmea_ b.15.1.1 (A:) Small heat shock protein {Wheat (Triticum
           aestivum) [TaxId: 4565]}
          Length = 150

 Score =  102 bits (255), Expect = 6e-30
 Identities = 75/106 (70%), Positives = 90/106 (84%)

Query: 8   INLTETPEAHVFKTDLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGM 67
           ++  ETPEAHVFK DLPG++KEEVKVEVED  VL +SG+R  EKEDKND WHRVERSSG 
Sbjct: 45  MDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGK 104

Query: 68  FSRRFRLPENVKMDQIKASMESGVLTVTVPKVEVTKPDVKAIEISG 113
           F RRFRL E+ K++++KA +E+GVLTVTVPK EV KP+VKAI+ISG
Sbjct: 105 FVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIQISG 150


>d1shsa_ b.15.1.1 (A:) Small heat shock protein {Archaeon
           Methanococcus jannaschii [TaxId: 2190]}
          Length = 115

 Score = 80.8 bits (199), Expect = 8e-22
 Identities = 24/103 (23%), Positives = 43/103 (41%)

Query: 8   INLTETPEAHVFKTDLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGM 67
           I++ E  +       LPG+ KE++ +    D +   + +  +   +     +        
Sbjct: 13  ISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEE 72

Query: 68  FSRRFRLPENVKMDQIKASMESGVLTVTVPKVEVTKPDVKAIE 110
             R  +LP  VK +   A  E+GVL+V +PK E +      IE
Sbjct: 73  IYRTIKLPATVKEENASAKFENGVLSVILPKAESSIKKGINIE 115


>d2csoa1 a.4.5.31 (A:8-122) Pleckstrin {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 115

 Score = 24.5 bits (53), Expect = 2.5
 Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 3/30 (10%)

Query: 70 RRFRLPENVKMDQIKASM---ESGVLTVTV 96
          R  RLPE + +  +  SM   E G+  + +
Sbjct: 1  RSIRLPETIDLGALYLSMKDTEKGIKELNL 30


>d1rl1a_ b.15.1.3 (A:) Suppressor of G2 allele of skp1 homolog, gst1
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 92

 Score = 23.7 bits (51), Expect = 4.1
 Identities = 11/90 (12%), Positives = 29/90 (32%), Gaps = 16/90 (17%)

Query: 11  TETPEAHVFKTDLPGLRKEEVKVEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFSR 70
            +T    V    +  ++K +V VE  +  +           +  +   + ++        
Sbjct: 8   YQTESQVVITLMIKNVQKNDVNVEFSEKELS-------ALVKLPSGEDYNLK-------- 52

Query: 71  RFRLPENVKMDQIKASMESGVLTVTVPKVE 100
              L   +  +Q    + S  + + + K E
Sbjct: 53  -LELLHPIIPEQSTFKVLSTKIEIKLKKPE 81


>d1oyia_ a.4.5.19 (A:) dsRNA-binding protein E3 (E3L) {Vaccinia
          virus [TaxId: 10245]}
          Length = 62

 Score = 22.8 bits (48), Expect = 5.5
 Identities = 10/37 (27%), Positives = 22/37 (59%)

Query: 33 VEVEDDRVLQISGQRNIEKEDKNDTWHRVERSSGMFS 69
          + +E     Q++ Q N+EK + N   + ++RS+ ++S
Sbjct: 14 IGIEGATAAQLTRQLNMEKREVNKALYDLQRSAMVYS 50


>d1s7ja_ d.21.1.2 (A:) Hypothetical protein EF0119 {Enterococcus
           faecalis [TaxId: 1351]}
          Length = 260

 Score = 23.7 bits (50), Expect = 7.2
 Identities = 7/20 (35%), Positives = 12/20 (60%), Gaps = 1/20 (5%)

Query: 27  RKEEVKVEVEDDRVLQISGQ 46
           R   +  EV+++RV+ I G 
Sbjct: 231 RGGFLTCEVKENRVI-IGGT 249


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.314    0.132    0.375 

Gapped
Lambda     K      H
   0.267   0.0595    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 413,052
Number of extensions: 17227
Number of successful extensions: 30
Number of sequences better than 10.0: 1
Number of HSP's gapped: 30
Number of HSP's successfully gapped: 9
Length of query: 113
Length of database: 2,407,596
Length adjustment: 71
Effective length of query: 42
Effective length of database: 1,432,766
Effective search space: 60176172
Effective search space used: 60176172
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 47 (22.2 bits)