BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033690
MEGLTASEVAGFGVGTVLLCATIAAPKLDAFFSASQRSSLGMCKKCGDVGMIACSRCKGM
GLIKSNGLFGFSIMDELYPPLDGAESQMKSIGCSKCKGRGHFCCPGCSNKPQV

High Scoring Gene Products

Symbol, full name Information P value
AT5G15802 protein from Arabidopsis thaliana 3.2e-26

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033690
        (113 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:1005716167 - symbol:AT5G15802 "AT5G15802" spec...   296  3.2e-26   1


>TAIR|locus:1005716167 [details] [associations]
            symbol:AT5G15802 "AT5G15802" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:BT005183 EMBL:AK117495
            IPI:IPI00524795 RefSeq:NP_850827.1 UniGene:At.47054
            ProteinModelPortal:Q8GYN2 SMR:Q8GYN2 IntAct:Q8GYN2 PaxDb:Q8GYN2
            PRIDE:Q8GYN2 EnsemblPlants:AT5G15802.1 GeneID:831437
            KEGG:ath:AT5G15802 TAIR:At5g15802 eggNOG:NOG306168
            HOGENOM:HOG000240144 InParanoid:Q8GYN2 OMA:DLRMIAC PhylomeDB:Q8GYN2
            ProtClustDB:CLSN2679993 Genevestigator:Q8GYN2 Uniprot:Q8GYN2
        Length = 99

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 60/108 (55%), Positives = 73/108 (67%)

Query:     1 MEGLTASEVAGFGVGTVLLCATIAAPKLDAFFSASQRSSLGMCKKCGDVGMIACSRCKGM 60
             M+ LT++EVAG  VG +LL ATIAAPK+DAF +ASQR SLGMC+KCGD+  +AC RCKG 
Sbjct:     1 MQSLTSNEVAGLAVGALLLGATIAAPKVDAFIAASQRRSLGMCRKCGDLKNVACGRCKGT 60

Query:    61 GLIKSNGLFGFSIMDELYPPLDGAESQMKSIGCSKCKGRGHFCCPGCS 108
             G IKS G FGFS  D          S  +S+ C  C+ +G F CP CS
Sbjct:    61 GTIKSGGFFGFS--DS---------SNTRSVACDNCQAKGCFPCPECS 97


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.138   0.442    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      113       113   0.00091  102 3  11 22  0.43    30
                                                     29  0.44    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  539 (57 KB)
  Total size of DFA:  115 KB (2076 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.37u 0.11s 11.48t   Elapsed:  00:00:01
  Total cpu time:  11.37u 0.11s 11.48t   Elapsed:  00:00:01
  Start:  Tue May 21 00:18:38 2013   End:  Tue May 21 00:18:39 2013

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