BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033690
(113 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P30432|FUR2_DROME Furin-like protease 2 OS=Drosophila melanogaster GN=Fur2 PE=2 SV=2
Length = 1679
Score = 35.4 bits (80), Expect = 0.091, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 43 CKKCGDVGMIACSRCKGMGLIKSNGLFGFSIMDELYPPLDGAESQMKSIGCSKCKGRGHF 102
CK C D G +AC+ C ++ +G + Y A + C C G G F
Sbjct: 1358 CKTCNDAGPLACTSCPPHSML--DGGLCMECLSSQYYDTTSATCKTCHDSCRSCFGPGQF 1415
Query: 103 CCPGC 107
C GC
Sbjct: 1416 SCKGC 1420
>sp|Q72GN6|DNAJ_THET2 Chaperone protein DnaJ OS=Thermus thermophilus (strain HB27 / ATCC
BAA-163 / DSM 7039) GN=dnaJ PE=3 SV=1
Length = 350
Score = 33.9 bits (76), Expect = 0.27, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 22/78 (28%)
Query: 43 CKKCGDVG--MIACSRCKGMGLIKS--NGLFGFSIMDELYPPLDGAESQMKSIGCSKCKG 98
C+ CG G C C+G G+++S FG + + C CKG
Sbjct: 129 CEACGGEGGRRTPCPTCRGQGVVESYRQSFFG---------------TVVTRTACPHCKG 173
Query: 99 RGHF---CCPGCSNKPQV 113
RG+ CP C + +V
Sbjct: 174 RGYLLAETCPACRGRGRV 191
>sp|Q5SLW9|DNAJ1_THET8 Chaperone protein DnaJ 1 OS=Thermus thermophilus (strain HB8 / ATCC
27634 / DSM 579) GN=dnaJ1 PE=3 SV=1
Length = 350
Score = 33.9 bits (76), Expect = 0.27, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 22/78 (28%)
Query: 43 CKKCGDVG--MIACSRCKGMGLIKS--NGLFGFSIMDELYPPLDGAESQMKSIGCSKCKG 98
C+ CG G C C+G G+++S FG + + C CKG
Sbjct: 129 CEACGGEGGRRTPCPTCRGQGVVESYRQSFFG---------------TVVTRTACPHCKG 173
Query: 99 RGHF---CCPGCSNKPQV 113
RG+ CP C + +V
Sbjct: 174 RGYLLAETCPACRGRGRV 191
>sp|A1WX30|DNAJ_HALHL Chaperone protein DnaJ OS=Halorhodospira halophila (strain DSM 244
/ SL1) GN=dnaJ PE=3 SV=1
Length = 385
Score = 32.7 bits (73), Expect = 0.73, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 9/64 (14%)
Query: 43 CKKCGDVGMIA------CSRCKGMGLIKSNGLFGFSIMDELYPPLDGAESQMKSIGCSKC 96
C C G A C CKG G ++ F FSI P G E M + C KC
Sbjct: 154 CDACKGSGSRAGSKPQTCPTCKGHGDVRVQQGF-FSIQQTC--PRCGGEGTMVTDPCPKC 210
Query: 97 KGRG 100
+GRG
Sbjct: 211 RGRG 214
>sp|B9KAB9|DNAJ_THENN Chaperone protein DnaJ OS=Thermotoga neapolitana (strain ATCC 49049
/ DSM 4359 / NS-E) GN=dnaJ PE=3 SV=1
Length = 370
Score = 32.3 bits (72), Expect = 0.88, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 9/66 (13%)
Query: 43 CKKCG------DVGMIACSRCKGMGLIKSN--GLFGFSIMDELYPPLDGAESQMKSIGCS 94
C +CG D G I+C RC G G I+ FG+ + + G + + C
Sbjct: 157 CPRCGGTGVEPDSGYISCPRCGGTGRIREEKRSFFGYFVSERTCDECGGTGRVPQEL-CH 215
Query: 95 KCKGRG 100
+C G G
Sbjct: 216 ECGGSG 221
>sp|Q8C3L1|SSUH2_MOUSE Protein SSUH2 homolog OS=Mus musculus GN=Ssuh2 PE=2 SV=1
Length = 340
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 43 CKKCGDVGMIACSRCKGMGLIKSNGLFGFSIMDELYPPLDGAESQMKSIGCSKCKGRGHF 102
C KC G CS C G G+++ + G + P S CS C GRG+
Sbjct: 178 CHKCHGRGRYKCSGCHGAGMVRCSSCSG-TKRKAKQPRRCHLCSGSGRRRCSTCSGRGNK 236
Query: 103 CCPGCSNK 110
C C +
Sbjct: 237 TCATCKGE 244
>sp|A8EUC7|DNAJ_ARCB4 Chaperone protein DnaJ OS=Arcobacter butzleri (strain RM4018)
GN=dnaJ PE=3 SV=1
Length = 372
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 8/64 (12%)
Query: 43 CKKCGDVG-----MIACSRCKGMGLIKSNGLFGFSIMDELYPPLDGAESQMKSIGCSKCK 97
CK C G + C CKG G + S GF + P G Q + C CK
Sbjct: 147 CKPCEGTGAKDGKLSTCPTCKGQGQVHSRQ--GFMTFAQTCPRC-GGTGQATTDSCKSCK 203
Query: 98 GRGH 101
G G+
Sbjct: 204 GTGY 207
>sp|Q9Y2M2|SSUH2_HUMAN Protein SSUH2 homolog OS=Homo sapiens GN=SSUH2 PE=1 SV=1
Length = 353
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 29/80 (36%), Gaps = 14/80 (17%)
Query: 32 FSASQRSSLGMCKKCGDVGMIACSRCKGMGLIKSNGLFGFSIMDELYPPLDGAESQMK-S 90
F S + C KC G CS C G G ++ P GA+ + K S
Sbjct: 144 FQVPHSSLVKECHKCHGRGRYKCSGCHGAGTVRC-------------PSCCGAKRKAKQS 190
Query: 91 IGCSKCKGRGHFCCPGCSNK 110
C C G G C CS +
Sbjct: 191 RRCQLCAGSGRRRCSTCSGR 210
>sp|B8DQW8|DNAJ_DESVM Chaperone protein DnaJ OS=Desulfovibrio vulgaris (strain Miyazaki F
/ DSM 19637) GN=dnaJ PE=3 SV=1
Length = 374
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 13/66 (19%)
Query: 43 CKKCGDVGMIA------CSRCKGMGLIK-SNGLFGFSIMDELYP-PLDGAESQMKSIGCS 94
C +C G A C C G G I+ S G F ++ P P+ E Q+ C
Sbjct: 148 CDECNGSGAAAGTKPETCRHCGGNGQIRQSQGFFQIAV-----PCPVCRGEGQVIPTPCP 202
Query: 95 KCKGRG 100
KCKG G
Sbjct: 203 KCKGSG 208
>sp|Q88VM1|DNAJ_LACPL Chaperone protein DnaJ OS=Lactobacillus plantarum (strain ATCC
BAA-793 / NCIMB 8826 / WCFS1) GN=dnaJ PE=3 SV=1
Length = 380
Score = 30.0 bits (66), Expect = 4.9, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 9/67 (13%)
Query: 43 CKKCGDVGM------IACSRCKGMGLI--KSNGLFGFSIMDELYPPLDGAESQMKSIGCS 94
C+ CG G + CS+C G G I ++N G + ++ G ++K C+
Sbjct: 153 CETCGGSGAKPGTSPVTCSKCHGAGYIQVQTNTPLGRMMSQQVCDVCHGTGKEIKD-KCA 211
Query: 95 KCKGRGH 101
C G GH
Sbjct: 212 TCGGSGH 218
>sp|Q9U2R6|NHR91_CAEEL Nuclear hormone receptor family member nhr-91 OS=Caenorhabditis
elegans GN=nhr-91 PE=1 SV=2
Length = 474
Score = 29.6 bits (65), Expect = 5.4, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Query: 18 LLCATIAAPKLDAFFSASQRSSLGMCKKCGD------VGMIACSRCKG 59
+L + + P D+ +A +SS +C CGD G C CKG
Sbjct: 75 VLFSILGTPTTDSTSNAVSKSSSKLCSVCGDKSTGLHYGAATCEGCKG 122
>sp|Q7VG06|DNAJ_HELHP Chaperone protein DnaJ OS=Helicobacter hepaticus (strain ATCC 51449
/ 3B1) GN=dnaJ PE=3 SV=1
Length = 385
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
Query: 43 CKKCGDVG--MIACSRCKGMGLIKSNGLFGFSIMDELYPPLDGAESQMKSIGCSKCKGRG 100
CK G G + C C G G + GF + P G E Q S CSKCKG G
Sbjct: 152 CKGTGAKGGKLNTCKDCGGKGQVYMRQ--GFMTFAQTCPTCKG-EGQSASEKCSKCKGSG 208
>sp|Q75VW3|DNAJ_HYDTT Chaperone protein DnaJ OS=Hydrogenobacter thermophilus (strain DSM
6534 / IAM 12695 / TK-6) GN=dnaJ PE=3 SV=1
Length = 356
Score = 28.9 bits (63), Expect = 9.5, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 22/70 (31%)
Query: 47 GDVGMIACSRCKGMGLIKSNGLFGFSIMDELYPPLDGAESQMKSIGCSKCKGRGHFC--- 103
G + + C C+G G + +G+F F P CS CKGRG
Sbjct: 144 GKMEKVTCHACEGTGR-RVSGIFSFP-----RP-------------CSVCKGRGFIIKNQ 184
Query: 104 CPGCSNKPQV 113
CP CS + +V
Sbjct: 185 CPACSGRGRV 194
>sp|Q8DKR7|DNAJ_THEEB Chaperone protein DnaJ OS=Thermosynechococcus elongatus (strain
BP-1) GN=dnaJ PE=3 SV=2
Length = 373
Score = 28.9 bits (63), Expect = 9.8, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 7/69 (10%)
Query: 40 LGMCKKCGDVGM------IACSRCKGMGLIKSNGLFGFSIMDELYP-PLDGAESQMKSIG 92
L CK C G + CS C G+G ++ + F +L P G +
Sbjct: 142 LETCKTCQGTGAKPGTRPVTCSTCGGVGQVRRSARTPFGSFTQLTTCPTCGGSGVVIEDR 201
Query: 93 CSKCKGRGH 101
C C G+GH
Sbjct: 202 CESCGGQGH 210
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.442
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,505,630
Number of Sequences: 539616
Number of extensions: 1415275
Number of successful extensions: 3461
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 3416
Number of HSP's gapped (non-prelim): 91
length of query: 113
length of database: 191,569,459
effective HSP length: 81
effective length of query: 32
effective length of database: 147,860,563
effective search space: 4731538016
effective search space used: 4731538016
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)