BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033691
MYLSIKDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFI
TLCKELRRIKVACLKGEQKVRRPWWAPSCLSVVFVKVAKRNRQSRVVSLKLEP

High Scoring Gene Products

Symbol, full name Information P value
AT3G07760 protein from Arabidopsis thaliana 5.1e-51

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033691
        (113 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2077347 - symbol:AT3G07760 "AT3G07760" species...   530  5.1e-51   1


>TAIR|locus:2077347 [details] [associations]
            symbol:AT3G07760 "AT3G07760" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR001660 InterPro:IPR011510 Pfam:PF07647
            PROSITE:PS50105 EMBL:CP002686 Gene3D:1.10.150.50 InterPro:IPR013761
            SUPFAM:SSF47769 EMBL:AY054591 EMBL:AF428412 EMBL:AY064693
            EMBL:AY088501 IPI:IPI00545406 RefSeq:NP_566319.1 RefSeq:NP_850538.1
            UniGene:At.18346 ProteinModelPortal:Q93VV3 SMR:Q93VV3 DNASU:819967
            EnsemblPlants:AT3G07760.1 EnsemblPlants:AT3G07760.2 GeneID:819967
            KEGG:ath:AT3G07760 eggNOG:NOG290489 OMA:NLGGYRQ
            ProtClustDB:CLSN2688157 Genevestigator:Q93VV3 Uniprot:Q93VV3
        Length = 125

 Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
 Identities = 99/109 (90%), Positives = 104/109 (95%)

Query:     4 SIKDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLC 63
             +++DVG WLEEINLGGYRQIFKENGVNGEYLE MS+FTTEQIL FIRR HMKWGDFITLC
Sbjct:    16 TVEDVGSWLEEINLGGYRQIFKENGVNGEYLESMSVFTTEQILHFIRRHHMKWGDFITLC 75

Query:    64 KELRRIKVACLKGEQKVRRPWWAPSCLSVVFVKVAKRNRQSRVVSLKLE 112
             KELRRIKVACLKGEQ+VRRPWWAPSCLSVVFVK AKRNRQSRVVSLKLE
Sbjct:    76 KELRRIKVACLKGEQRVRRPWWAPSCLSVVFVKAAKRNRQSRVVSLKLE 124


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.140   0.450    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      113       113   0.00091  102 3  11 22  0.40    30
                                                     29  0.44    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  572 (61 KB)
  Total size of DFA:  130 KB (2082 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  10.55u 0.07s 10.62t   Elapsed:  00:00:10
  Total cpu time:  10.55u 0.07s 10.62t   Elapsed:  00:00:11
  Start:  Fri May 10 00:01:20 2013   End:  Fri May 10 00:01:31 2013

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