Query 033691
Match_columns 113
No_of_seqs 28 out of 30
Neff 2.3
Searched_HMMs 29240
Date Mon Mar 25 08:14:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033691.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033691hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bs7_A Protein aveugle; sterIl 99.7 6.7E-17 2.3E-21 103.5 6.0 66 2-73 5-72 (78)
2 2gle_A Neurabin-1; SAM domain, 99.7 4.8E-17 1.6E-21 103.3 4.3 68 2-75 6-73 (74)
3 2f3n_A SH3 and multiple ankyri 99.6 1.8E-16 6.2E-21 102.4 5.3 64 2-71 4-67 (76)
4 3bq7_A Diacylglycerol kinase d 99.6 3.9E-16 1.3E-20 101.8 5.9 65 2-72 9-73 (81)
5 3bs5_A Protein aveugle; sterIl 99.6 4.1E-16 1.4E-20 107.6 6.0 66 2-73 25-92 (106)
6 1v85_A Similar to ring finger 99.6 2.7E-16 9.2E-21 104.9 4.4 65 2-72 19-87 (91)
7 3bs5_B Connector enhancer of k 99.6 9.1E-16 3.1E-20 98.6 5.9 67 2-74 6-74 (80)
8 2e8o_A SAM domain and HD domai 99.6 5.7E-16 2E-20 105.3 4.6 63 2-70 29-93 (103)
9 2ean_A Connector enhancer of k 99.6 1.6E-15 5.6E-20 98.5 5.4 67 2-74 10-78 (83)
10 1pk1_B Sex COMB on midleg CG94 99.6 1.5E-15 5E-20 103.0 5.2 65 2-72 16-82 (89)
11 1kw4_A Polyhomeotic; SAM domai 99.6 1.8E-15 6.1E-20 101.9 3.9 65 2-72 16-81 (89)
12 2d8c_A Phosphatidylcholine:cer 99.6 1.1E-15 3.9E-20 105.1 2.9 65 2-74 19-85 (97)
13 2ke7_A Ankyrin repeat and ster 99.4 1.4E-13 4.8E-18 93.9 2.8 78 2-90 19-99 (103)
14 2e8n_A Ephrin type-A receptor 99.4 7.1E-13 2.4E-17 87.9 5.2 76 4-89 11-87 (88)
15 1wwv_A Connector enhancer of k 99.3 1.7E-13 5.7E-18 93.2 0.7 64 2-73 13-78 (91)
16 1ow5_A Serine/threonine-protei 99.3 1.3E-12 4.5E-17 90.8 4.4 60 6-71 16-76 (85)
17 2kso_A Ephrin type-A receptor 99.3 4.3E-12 1.5E-16 84.0 5.9 63 3-71 14-77 (82)
18 2kg5_A ARF-GAP, RHO-GAP domain 99.2 6.4E-12 2.2E-16 86.4 4.2 63 3-71 24-87 (100)
19 1ucv_A Ephrin type-A receptor 99.2 1.5E-11 5.2E-16 80.4 5.2 64 4-73 6-70 (81)
20 2qkq_A Ephrin type-B receptor 99.2 8.8E-12 3E-16 81.4 3.9 62 5-72 15-77 (83)
21 2eam_A Putative 47 kDa protein 99.2 3.8E-12 1.3E-16 82.7 1.9 65 3-70 10-74 (80)
22 1b4f_A EPHB2; SAM domain, EPH 99.2 1.9E-11 6.4E-16 79.5 4.7 64 4-73 10-74 (82)
23 2eao_A Ephrin type-B receptor 99.2 2.3E-11 7.7E-16 82.3 4.9 64 4-73 21-85 (99)
24 2k4p_A Phosphatidylinositol-3, 99.2 1.1E-11 3.9E-16 83.6 2.8 63 2-70 23-86 (86)
25 3h8m_A Ephrin type-A receptor 99.2 3.3E-11 1.1E-15 81.5 4.9 63 3-71 23-86 (90)
26 1b0x_A Protein (EPHA4 receptor 99.1 4.8E-11 1.6E-15 80.0 5.3 63 4-72 25-88 (94)
27 2l5y_A Stromal interaction mol 99.1 6.3E-12 2.2E-16 93.5 0.6 38 2-39 80-118 (150)
28 2dl0_A SAM and SH3 domain-cont 99.1 3.8E-11 1.3E-15 82.2 3.4 63 2-70 20-83 (97)
29 3tad_C Liprin-beta-1; protein 99.1 9.5E-11 3.3E-15 93.1 5.3 65 2-71 17-81 (265)
30 3kka_C Ephrin type-A receptor 99.1 8.6E-11 2.9E-15 78.9 4.1 61 4-70 20-81 (86)
31 2kiv_A Ankyrin repeat and ster 99.1 1.1E-10 3.6E-15 83.2 4.2 65 4-71 13-77 (148)
32 3hil_A Ephrin type-A receptor 99.0 1.6E-10 5.4E-15 77.1 4.3 59 4-68 22-81 (82)
33 1x40_A ARAP2; ASAP-related pro 99.0 3.6E-10 1.2E-14 75.7 5.5 61 6-72 16-77 (91)
34 2lmr_A ODIN, ankyrin repeat an 99.0 2.6E-10 8.8E-15 79.0 3.3 65 4-71 28-92 (101)
35 3sei_A Caskin-1; SAM domain, p 99.0 3.7E-10 1.3E-14 81.2 3.8 63 4-72 9-71 (149)
36 2k60_A Protein (stromal intera 99.0 2.3E-10 7.9E-15 85.3 2.7 39 2-40 80-119 (150)
37 3k1r_B Usher syndrome type-1G 98.9 1.8E-09 6.1E-14 70.5 5.7 63 6-75 3-65 (74)
38 3sei_A Caskin-1; SAM domain, p 98.9 1.5E-09 5.1E-14 78.0 5.2 61 4-70 78-139 (149)
39 1v38_A SAM-domain protein sams 98.9 2.3E-09 8E-14 70.0 4.5 62 3-70 10-72 (78)
40 3tad_C Liprin-beta-1; protein 98.8 7.4E-09 2.5E-13 82.2 7.3 64 3-72 90-153 (265)
41 2dkz_A Hypothetical protein LO 98.7 9.7E-09 3.3E-13 71.4 3.9 43 2-48 17-60 (84)
42 2kiv_A Ankyrin repeat and ster 98.6 1.8E-08 6.3E-13 71.6 3.3 60 3-67 86-146 (148)
43 3tac_B Liprin-alpha-2; transfe 98.5 1.4E-07 4.8E-12 77.9 5.2 61 2-67 38-103 (334)
44 1uqv_A STE50 protein; SAM, ste 98.4 4.9E-07 1.7E-11 62.9 5.7 63 2-70 11-77 (85)
45 2eap_A Lymphocyte cytosolic pr 98.3 5.1E-07 1.7E-11 63.5 3.3 37 1-38 20-57 (90)
46 3tac_B Liprin-alpha-2; transfe 98.2 7.5E-07 2.5E-11 73.6 4.1 59 7-70 164-223 (334)
47 2d3d_A VTS1 protein; RNA bindi 97.8 4.4E-05 1.5E-09 52.7 5.3 63 6-76 19-81 (88)
48 2y9t_A Tumor protein 63; apopt 97.7 9.2E-05 3.1E-09 50.0 6.8 63 7-75 8-70 (82)
49 2y9u_A Tumor protein 63; apopt 97.7 0.0001 3.6E-09 48.1 5.9 61 7-73 6-66 (69)
50 2es6_A VTS1P; SAM domain, prot 97.6 6.5E-05 2.2E-09 53.3 5.1 63 6-76 32-94 (101)
51 2b6g_A VTS1P; alpha-helix, pen 97.6 0.0001 3.4E-09 53.3 5.6 64 5-76 49-112 (119)
52 2qar_B Telsam domain; polymer, 97.5 0.0001 3.5E-09 50.2 3.8 62 2-73 14-78 (93)
53 1oxj_A RNA-binding protein sma 97.1 0.00029 1E-08 53.9 3.6 57 5-70 7-63 (173)
54 1sv0_C Modulator of the activi 97.1 0.00047 1.6E-08 45.5 4.1 61 2-72 13-79 (82)
55 1ji7_A ETS-related protein TEL 96.9 0.00025 8.7E-09 48.0 1.0 61 2-72 14-77 (89)
56 1wwu_A Hypothetical protein FL 96.2 0.003 1E-07 44.7 3.0 41 3-45 24-65 (99)
57 2e8m_A Epidermal growth factor 96.1 0.0029 9.8E-08 44.8 2.7 40 4-45 35-75 (99)
58 1x66_A Friend leukemia integra 95.2 0.022 7.7E-07 39.0 4.1 59 2-70 26-89 (98)
59 1sv0_A ETS DNA-binding protein 94.3 0.025 8.5E-07 38.0 2.6 59 2-72 12-75 (85)
60 2h80_A STAR-related lipid tran 93.8 0.033 1.1E-06 38.6 2.4 24 5-28 21-44 (81)
61 2dky_A RHO-GTPase-activating p 93.0 0.059 2E-06 38.0 2.7 24 5-28 23-46 (91)
62 1sxd_A GA repeat binding prote 92.9 0.049 1.7E-06 36.9 2.1 57 2-70 25-85 (91)
63 2jv3_A ETS1 proto-oncogene; ET 92.6 0.037 1.3E-06 38.7 1.2 49 2-60 43-97 (110)
64 1sxe_A Transcriptional regulat 92.4 0.065 2.2E-06 36.7 2.2 36 2-39 29-69 (97)
65 1dxs_A P53-like transcription 91.1 0.1 3.6E-06 35.9 2.0 44 7-58 8-51 (80)
66 2dkx_A SAM pointed domain-cont 90.4 0.12 4E-06 35.3 1.8 59 2-71 26-88 (96)
67 2ytu_A Friend leukemia integra 88.8 0.46 1.6E-05 34.2 4.0 61 2-72 40-105 (128)
68 2qb0_B Telsam domain - lysozym 88.5 0.17 5.8E-06 38.3 1.6 36 2-39 14-53 (241)
69 2e8p_A ELF3 protein; cell-free 84.4 0.72 2.5E-05 31.5 2.9 49 2-60 26-81 (92)
70 3idw_A Actin cytoskeleton-regu 80.0 2.2 7.4E-05 28.7 3.9 42 19-67 21-62 (72)
71 3lm3_A Uncharacterized protein 76.3 0.12 4.1E-06 44.2 -3.9 57 6-62 45-108 (449)
72 3f0i_A Arsenate reductase; str 74.3 2.7 9.3E-05 28.2 3.2 49 3-51 41-90 (119)
73 3rdw_A Putative arsenate reduc 66.0 6 0.0002 26.6 3.4 49 3-51 42-91 (121)
74 3l78_A Regulatory protein SPX; 58.4 12 0.00042 24.7 3.9 48 3-51 37-85 (120)
75 3fz4_A Putative arsenate reduc 57.3 10 0.00034 25.4 3.3 48 3-51 40-90 (120)
76 3gkx_A Putative ARSC family re 53.7 11 0.00038 25.2 3.0 48 3-51 41-91 (120)
77 2qol_A Ephrin receptor; recept 52.2 3 0.0001 31.2 0.0 25 6-30 340-364 (373)
78 3qk9_A Mitochondrial import in 51.3 5.5 0.00019 30.3 1.3 86 18-103 10-126 (222)
79 2hl7_A Cytochrome C-type bioge 49.3 5.7 0.0002 26.7 1.0 20 39-61 59-78 (84)
80 2kw0_A CCMH protein; oxidoredu 47.4 6.3 0.00022 27.0 1.0 20 39-61 56-75 (90)
81 2gs0_B Cellular tumor antigen 33.4 16 0.00055 23.5 1.2 10 4-13 27-36 (54)
82 3k8p_C DSL1, KLLA0C02695P; int 29.4 58 0.002 27.2 4.2 49 15-71 305-353 (357)
83 1eh2_A EPS15; calcium binding, 29.1 1.1E+02 0.0038 19.6 4.8 49 18-66 15-77 (106)
84 2roh_A RTBP1, telomere binding 29.1 56 0.0019 23.0 3.6 58 2-59 33-114 (122)
85 1n1j_A NF-YB; histone-like PAI 28.7 40 0.0014 21.7 2.6 22 4-25 64-85 (93)
86 3cxj_A Uncharacterized protein 28.1 23 0.00079 26.4 1.5 18 1-18 1-18 (165)
87 2yqk_A Arginine-glutamic acid 27.2 33 0.0011 20.9 1.9 39 2-49 11-51 (63)
88 2lz1_A Nuclear factor erythroi 27.0 32 0.0011 23.9 1.9 19 33-51 50-70 (90)
89 4e9m_A Nucleotide-binding olig 27.0 22 0.00074 26.5 1.1 35 7-52 105-139 (144)
90 2p2u_A HOST-nuclease inhibitor 26.5 35 0.0012 24.6 2.2 32 3-36 107-138 (171)
91 1rw1_A Conserved hypothetical 26.4 90 0.0031 20.0 4.0 12 40-51 73-84 (114)
92 1x6m_A GFA, glutathione-depend 26.0 23 0.00078 25.6 1.1 19 5-23 157-175 (196)
93 1juo_A Sorcin; calcium-binding 25.3 1.5E+02 0.005 19.4 5.7 14 4-17 50-63 (198)
94 2igp_A Retinoblastoma-associat 25.3 84 0.0029 21.6 3.8 40 5-52 20-59 (120)
95 2oq2_A Phosphoadenosine phosph 24.8 37 0.0013 25.0 2.1 19 1-19 188-206 (261)
96 2goy_A Adenosine phosphosulfat 24.6 42 0.0014 24.9 2.4 19 1-19 197-215 (275)
97 1jog_A Hypothetical protein HI 24.6 72 0.0025 22.1 3.4 58 8-68 61-141 (146)
98 1a4p_A S100A10; S100 family, E 24.3 1E+02 0.0035 18.9 3.8 58 18-75 9-87 (96)
99 2o8v_A Phosphoadenosine phosph 23.7 40 0.0014 24.6 2.1 18 1-18 183-200 (252)
100 1j9i_A GPNU1 DBD;, terminase s 23.4 33 0.0011 20.2 1.3 16 3-18 41-56 (68)
101 2kok_A Arsenate reductase; bru 22.8 87 0.003 20.3 3.4 12 40-51 78-89 (120)
102 1dtc_A Acetyl-delta-toxin; NMR 22.7 34 0.0012 19.2 1.1 13 54-66 7-19 (26)
103 2jwk_A Protein TOLR; periplasm 22.1 72 0.0025 18.5 2.6 18 53-70 55-72 (74)
104 3khe_A Calmodulin-like domain 21.7 62 0.0021 20.5 2.4 54 18-71 123-191 (191)
105 2kgr_A Intersectin-1; structur 21.7 92 0.0031 19.7 3.3 50 18-67 14-78 (111)
106 3omd_A Uncharacterized protein 21.6 69 0.0024 23.3 2.9 32 21-52 52-85 (145)
107 3ezq_A Tumor necrosis factor r 21.3 2E+02 0.0068 20.0 5.2 63 11-73 14-83 (115)
108 3hz8_A Thiol:disulfide interch 20.7 1E+02 0.0034 21.0 3.5 21 4-24 108-131 (193)
109 2k9x_A Tburm1, uncharacterized 20.6 34 0.0012 23.2 1.1 39 3-41 35-84 (110)
110 2kn2_A Calmodulin; S MAPK phos 20.4 1.3E+02 0.0045 17.1 4.8 12 54-65 62-73 (92)
111 1wmg_A Netrin receptor UNC5H2; 20.4 1.7E+02 0.0057 19.2 4.5 52 13-75 39-93 (103)
112 2xvc_A ESCRT-III, SSO0910; cel 20.0 53 0.0018 21.3 1.8 15 38-52 8-22 (59)
No 1
>3bs7_A Protein aveugle; sterIle alpha motif (SAM) domain, cytoplasm, membrane, sensory transduction, vision, signaling protein; 1.90A {Drosophila melanogaster}
Probab=99.67 E-value=6.7e-17 Score=103.50 Aligned_cols=66 Identities=18% Similarity=0.330 Sum_probs=59.6
Q ss_pred CCCHHHHHHHHHhc--CcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHHH
Q 033691 2 YLSIKDVGLWLEEI--NLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVAC 73 (113)
Q Consensus 2 ~WS~EDVa~WLeei--GLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva~ 73 (113)
.||++||+.||+.+ ||++|.+.|.+|+|+|+.|..| +++-|+.++. .+.||+.++..+++.+|...
T Consensus 5 ~Wt~~~V~~WL~~~~~gl~~y~~~F~~~~I~G~~Ll~L----~~~dL~~lGI--~~~g~r~~il~~I~~Lr~~~ 72 (78)
T 3bs7_A 5 LWTVSDVLKWYRRHCGEYTQYEQLFAQHDITGRALLRI----TDSSLQRMGV--TDNRDREAIWREIVKQRLKT 72 (78)
T ss_dssp GCCHHHHHHHHHHHSGGGGGGHHHHHHTTCCHHHHTTC----CHHHHHHHTC--CCHHHHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHhcCHHHHHHHHHHCCCCHHHHhhC----CHHHHhHcCC--CCHHHHHHHHHHHHHHHhHH
Confidence 69999999999996 9999999999999999999999 5666777766 88999999999999998654
No 2
>2gle_A Neurabin-1; SAM domain, scaffold, protein protein interaction, protein binding; NMR {Rattus norvegicus}
Probab=99.66 E-value=4.8e-17 Score=103.33 Aligned_cols=68 Identities=24% Similarity=0.345 Sum_probs=59.3
Q ss_pred CCCHHHHHHHHHhcCcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhh
Q 033691 2 YLSIKDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVACLK 75 (113)
Q Consensus 2 ~WS~EDVa~WLeeiGLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva~~~ 75 (113)
+||++||+.||+.+||++|.+.|.+|+|||+.|..| +++-|..|+. .+.||+.++++.++.+|.+.-|
T Consensus 6 ~Ws~~~V~~WL~~~gl~~y~~~F~~~~i~g~~Ll~l----~~~dL~~lGI--~~~g~r~kil~~i~~L~~~~ek 73 (74)
T 2gle_A 6 EWSVQQVSHWLVGLSLDQYVSEFSAQNISGEQLLQL----DGNKLKALGM--TSSQDRALVKKKLKEMKMSLEK 73 (74)
T ss_dssp GCCSGGGHHHHHHTTTHHHHHHHTTTTCCHHHHHTC----CHHHHHTTTC--CCHHHHHHHHHHHHSHHHHHHH
T ss_pred cCCHHHHHHHHHHCCCHHHHHHHHHcCCCHHHHhhC----CHHHHHHcCC--CCHHHHHHHHHHHHHHHHHhhc
Confidence 699999999999999999999999999999999998 3333555554 5699999999999999987655
No 3
>2f3n_A SH3 and multiple ankyrin repeat domains 3; postsynaptic density, SAM domain, shank, scaffolding protein, structural protein; 2.10A {Rattus norvegicus} SCOP: a.60.1.2 PDB: 2f44_A
Probab=99.64 E-value=1.8e-16 Score=102.36 Aligned_cols=64 Identities=28% Similarity=0.431 Sum_probs=55.6
Q ss_pred CCCHHHHHHHHHhcCcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHH
Q 033691 2 YLSIKDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKV 71 (113)
Q Consensus 2 ~WS~EDVa~WLeeiGLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikv 71 (113)
.||++||++||+.+||++|.+.|.+|+|||..|..| +++-|..++. .+.|++.+++..++.++-
T Consensus 4 ~Ws~~~V~~WL~~lgl~~Y~~~F~~~~idg~~Ll~L----t~~dL~~lGI--~~~Ghr~kIl~aI~~l~~ 67 (76)
T 2f3n_A 4 LWSKFDVGDWLESIHLGEHRDRFEDHEIEGAHLPAL----TKEDFVELGV--TRVGHRENIERALRQLDG 67 (76)
T ss_dssp GCCHHHHHHHHHHTTCGGGHHHHHHTTCCGGGGGGC----CHHHHHHTTC--CCHHHHHHHHHHHHTC--
T ss_pred hCCHHHHHHHHHHCCCHHHHHHHHHcCCCHHHHccC----CHHHHHHcCC--CChhHHHHHHHHHHHHHH
Confidence 699999999999999999999999999999999988 5555666665 779999999999988763
No 4
>3bq7_A Diacylglycerol kinase delta; SAM domain, polymerization domain, alternative splicing, cytoplasm, membrane, metal-binding, phorbol-ester binding; 2.90A {Homo sapiens}
Probab=99.63 E-value=3.9e-16 Score=101.81 Aligned_cols=65 Identities=20% Similarity=0.400 Sum_probs=56.9
Q ss_pred CCCHHHHHHHHHhcCcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHH
Q 033691 2 YLSIKDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVA 72 (113)
Q Consensus 2 ~WS~EDVa~WLeeiGLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva 72 (113)
.||++||++||+.+||++|.+.|.+|+|||..|..| +++-|..|+. .+.|++.+++..++.++..
T Consensus 9 ~Ws~~~V~~WL~~lgl~~Y~~~F~~~~idg~~Ll~L----t~~dL~~lGI--~~~ghr~kIl~aI~~L~~~ 73 (81)
T 3bq7_A 9 LWGTEEVAAWLEHLSLCEYKDIFTRHDIRGSGLLHL----ERRDLKDLGV--TKVGHMKRILCGIKELSRS 73 (81)
T ss_dssp GCCHHHHHHHHHHTTCGGGHHHHHHTTCCHHHHTTC----CHHHHHHTTC--CCHHHHHHHHHHHHHHHC-
T ss_pred hCCHHHHHHHHHHCCCHHHHHHHHHcCCCHHHHCcC----CHHHHhHcCC--CCHHHHHHHHHHHHHHHHH
Confidence 699999999999999999999999999999999888 4454565665 7899999999999998754
No 5
>3bs5_A Protein aveugle; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Drosophila melanogaster}
Probab=99.62 E-value=4.1e-16 Score=107.62 Aligned_cols=66 Identities=18% Similarity=0.330 Sum_probs=60.1
Q ss_pred CCCHHHHHHHHHhc--CcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHHH
Q 033691 2 YLSIKDVGLWLEEI--NLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVAC 73 (113)
Q Consensus 2 ~WS~EDVa~WLeei--GLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva~ 73 (113)
.||++||++||+.+ ||++|.+.|.+|+|+|+.|+.| +++-|+.++. .+.||+.++..+|+.+|...
T Consensus 25 ~Wt~~~V~~WL~~~~~gl~~Y~~~F~~~~I~G~~Ll~L----t~~dLk~LGI--~~~GhR~kIl~~I~~Lr~~~ 92 (106)
T 3bs5_A 25 LWTVSDVLKWYRRHCGEYTQYEQLFAQHDITGRALLRI----TDSSLQRMGV--TDNRDREAIWREIVKQRLKT 92 (106)
T ss_dssp GCCHHHHHHHHHHHSGGGGGGHHHHHHTTCCHHHHTTC----CHHHHHHHTC--CCHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHcchHHHHHHHHHcCccHHHHhhC----CHHHHHhcCC--CCHHHHHHHHHHHHHHHHHh
Confidence 69999999999999 9999999999999999999999 5666777776 88999999999999998654
No 6
>1v85_A Similar to ring finger protein 36; apoptosis, neuron, cell death, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=99.62 E-value=2.7e-16 Score=104.95 Aligned_cols=65 Identities=26% Similarity=0.361 Sum_probs=57.8
Q ss_pred CCCHHHHHHHHHhcCc--chHHHHhhhcCCchhhhhcccccchHHHHHH--HHHhhhcchhHHHHHHHHHHHHHH
Q 033691 2 YLSIKDVGLWLEEINL--GGYRQIFKENGVNGEYLEGMSMFTTEQILRF--IRRCHMKWGDFITLCKELRRIKVA 72 (113)
Q Consensus 2 ~WS~EDVa~WLeeiGL--gqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~--i~r~~~k~Gd~itl~~El~~ikva 72 (113)
.||++||++||+++|| ++|.+.|.+|+|||+.|+.| +++-|+- ++. .+.||+.+++.+|+.+|..
T Consensus 19 ~Wt~~dV~~WL~~~gl~~~~Y~~~F~~~~IdG~~Ll~L----t~~dL~~~~LGI--~~~g~r~~il~~I~~Lr~~ 87 (91)
T 1v85_A 19 KWTTEEVVLWLEQLGPWASLYRDRFLSERVNGRLLLTL----TEEEFSRAPYTI--ENSSHRRVILTELERVRSG 87 (91)
T ss_dssp GCCHHHHHHHHHHHCGGGHHHHHHHHHTTCCHHHHHHC----CHHHHHSTTTCC--CCHHHHHHHHHHHHHHHSC
T ss_pred cCCHHHHHHHHHHcCCCHHHHHHHHHHhCCCHHHHhcC----CHHHHhccCCCC--CCHHHHHHHHHHHHHHHhc
Confidence 6999999999999999 99999999999999999999 5555544 655 7899999999999999853
No 7
>3bs5_B Connector enhancer of kinase suppressor of RAS 2; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Homo sapiens}
Probab=99.61 E-value=9.1e-16 Score=98.62 Aligned_cols=67 Identities=18% Similarity=0.213 Sum_probs=58.8
Q ss_pred CCCHHHHHHHHHhc--CcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHh
Q 033691 2 YLSIKDVGLWLEEI--NLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVACL 74 (113)
Q Consensus 2 ~WS~EDVa~WLeei--GLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva~~ 74 (113)
.||++||+.||+.+ ||++|.+.|.+|+|+|+.|..| +++-|+.|+. .+.||+.+++..++.++-.+.
T Consensus 6 ~Ws~~~V~~WL~~l~~gl~~Y~~~F~~~~i~G~~Ll~L----~~~dL~~lGI--~~~ghr~~il~~I~~L~~~~~ 74 (80)
T 3bs5_B 6 KWSPSQVVDWMKGLDDCLQQYIKNFEREKISGDQLLRI----THQELEDLGV--SRIGHQELILEAVDLLCALNY 74 (80)
T ss_dssp GCCHHHHHHHHHTSCGGGGGGHHHHHHHTCCHHHHHTC----CHHHHHHTTC--CCHHHHHHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHhhhHHHHHHHHHHcCCCHHHHHHC----CHHHHHHcCC--CCHHHHHHHHHHHHHHHHhhh
Confidence 69999999999999 6999999999999999999999 4555565555 789999999999999987654
No 8
>2e8o_A SAM domain and HD domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=5.7e-16 Score=105.30 Aligned_cols=63 Identities=16% Similarity=0.191 Sum_probs=56.8
Q ss_pred CCCHHHHHHHHHhcCcch--HHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHH
Q 033691 2 YLSIKDVGLWLEEINLGG--YRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIK 70 (113)
Q Consensus 2 ~WS~EDVa~WLeeiGLgq--Yre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ik 70 (113)
.||++||+.||+++||++ |.+.|++|+|||..|..|+ ++-|+.++. .+.||+.+++.+|+.++
T Consensus 29 ~Ws~~~V~~WL~~lgl~~~~y~~~F~~~~I~G~~Ll~Lt----~~dLkeLGI--~~~G~R~kil~~I~~Lr 93 (103)
T 2e8o_A 29 TWGPEQVCSFLRRGGFEEPVLLKNIRENEITGALLPCLD----ESRFENLGV--SSLGERKKLLSYIQRLV 93 (103)
T ss_dssp GCHHHHHHHHHHHHTCCCHHHHHHHHHTTCCTTTTTTCC----HHHHHHTTC--CCHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHcCCChHHHHHHHHHcCCCHHHHHhCC----HHHHHHcCC--CCHHHHHHHHHHHHHHH
Confidence 699999999999999999 9999999999999999994 666666655 68999999999999886
No 9
>2ean_A Connector enhancer of kinase suppressor of RAS 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=1.6e-15 Score=98.49 Aligned_cols=67 Identities=18% Similarity=0.203 Sum_probs=58.9
Q ss_pred CCCHHHHHHHHHhc--CcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHh
Q 033691 2 YLSIKDVGLWLEEI--NLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVACL 74 (113)
Q Consensus 2 ~WS~EDVa~WLeei--GLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva~~ 74 (113)
.||+++|++||+.+ ||++|.+.|.+|+|+|+.|..| +++-|.-|+. .+.||+.++..+++.++-.+.
T Consensus 10 ~Wt~~~V~~WL~~l~~gl~~Y~~~F~~~~I~G~~Ll~L----t~~dL~~LGI--~~~ghr~~il~~I~~L~~~~~ 78 (83)
T 2ean_A 10 KWSPSQVVDWMKGLDDCLQQYIKNFEREKISGDQLLRI----THQELEDLGV--SRIGHQELILEAVDLLCALNS 78 (83)
T ss_dssp GCCTTHHHHHHTTSCGGGTTTHHHHHHHTCCHHHHTTC----CHHHHHHHTC--CCSHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhhHHHHHHHHHHCCCCHHHHhhC----CHHHHHHhCC--CCHHHHHHHHHHHHHHHHHhh
Confidence 69999999999999 6999999999999999999998 4555666665 799999999999999986553
No 10
>1pk1_B Sex COMB on midleg CG9495-PA; hetero SAM domain, polymers, transcriptional repression, transcription repression; 1.80A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk3_A
Probab=99.58 E-value=1.5e-15 Score=103.01 Aligned_cols=65 Identities=17% Similarity=0.462 Sum_probs=56.2
Q ss_pred CCCHHHHHHHHHhc--CcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHH
Q 033691 2 YLSIKDVGLWLEEI--NLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVA 72 (113)
Q Consensus 2 ~WS~EDVa~WLeei--GLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva 72 (113)
.||+|||++||+.+ ||++|.+.|++|+|||+.|+.|+ .+.++.+++ +|.|+.++++..|.++|-|
T Consensus 16 ~WsvedV~~wl~~~~~g~~~y~~~F~~~eIDG~aLL~Lt---~~dl~~~mg---iklGpalKi~~~I~~lk~~ 82 (89)
T 1pk1_B 16 DWTIEEVIQYIESNDNSLAVHGDLFRKHEIDGKALLRLN---SERMMKYMG---LKLGPALKICNLVNKVNGR 82 (89)
T ss_dssp GCCHHHHHHHHHHHCGGGGGGHHHHHHTTCCHHHHHTCC---HHHHHHHSC---CCHHHHHHHHHHHHHHC--
T ss_pred hCCHHHHHHHHHHHccchHHHHHHHHHcCcChHHHhcCC---HHHHHHccC---CCccHHHHHHHHHHHHHcc
Confidence 69999999999999 89999999999999999999994 344666544 7999999999999998865
No 11
>1kw4_A Polyhomeotic; SAM domain, polycomb group, polymer, DNA binding protein; 1.75A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk1_A
Probab=99.56 E-value=1.8e-15 Score=101.95 Aligned_cols=65 Identities=23% Similarity=0.388 Sum_probs=55.1
Q ss_pred CCCHHHHHHHHHhc-CcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHH
Q 033691 2 YLSIKDVGLWLEEI-NLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVA 72 (113)
Q Consensus 2 ~WS~EDVa~WLeei-GLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva 72 (113)
.||+|||+.||+++ ||++|.+.|++|+|||+.|+.| +++-| +..+-+|.|++.+++..|+++|-+
T Consensus 16 ~Ws~edV~~wL~~l~gl~~y~~~F~~~~IdG~~LL~L----t~~dL--~k~lgIklG~r~kI~~~I~~L~~~ 81 (89)
T 1kw4_A 16 SWSVDDVSNFIRELPGCQDYVDDFIQQEIDGQALLRL----KEKHL--VNAMGMKLGPALKIVAKVESIKEV 81 (89)
T ss_dssp GCCHHHHHHHHHTSTTCGGGHHHHHHTTCCHHHHHHC----CHHHH--HTTTCCCHHHHHHHHHHHHHHC--
T ss_pred hCCHHHHHHHHHHCcChHHHHHHHHHhCccHHHHhcC----CHHHH--HHHcCCCHHHHHHHHHHHHHHHHH
Confidence 69999999999999 9999999999999999999999 44433 134556999999999999998754
No 12
>2d8c_A Phosphatidylcholine:ceramide cholinephosphotransferase 1; cell-free protein synthesis, protein regulation, lipid metabolism, structural genomics; NMR {Mus musculus} SCOP: a.60.1.2
Probab=99.55 E-value=1.1e-15 Score=105.07 Aligned_cols=65 Identities=23% Similarity=0.308 Sum_probs=57.0
Q ss_pred CCCHHHHHHHHHhcCcchHHHHhhhcCCchhhhhcccccchHHHHHH--HHHhhhcchhHHHHHHHHHHHHHHHh
Q 033691 2 YLSIKDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRF--IRRCHMKWGDFITLCKELRRIKVACL 74 (113)
Q Consensus 2 ~WS~EDVa~WLeeiGLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~--i~r~~~k~Gd~itl~~El~~ikva~~ 74 (113)
.||+|||++||+++||++|.+.| .| |||+.|+.| |+.-|+. +++ .+.||+..|..+|+++|-.+.
T Consensus 19 ~Ws~edV~~WL~~~Gl~~Y~~~F-~~-IdG~~LL~L----t~~dLk~~~LgI--~~~g~rkkl~~~I~~L~~~~~ 85 (97)
T 2d8c_A 19 YWSPKKVADWLLENAMPEYCEPL-EH-FTGQDLINL----TQEDFKKPPLYR--VSSDNGQRLLDMIETLKMEHH 85 (97)
T ss_dssp SCCTTHHHHHHHHTTCTTTTTTT-TT-CCHHHHHTC----CHHHHHSSSSSS--CSTTTTHHHHHHHHHHHHHSC
T ss_pred hCCHHHHHHHHHHcCCHHHHHHH-Hc-CCCHHHhcC----CHHHHhhCCCCC--CCHHHHHHHHHHHHHHHHHhH
Confidence 69999999999999999999999 57 999999999 5665555 544 899999999999999986553
No 13
>2ke7_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, alternative splicing, ANK repeat, cell junction, cell membrane; NMR {Homo sapiens}
Probab=99.38 E-value=1.4e-13 Score=93.89 Aligned_cols=78 Identities=21% Similarity=0.321 Sum_probs=52.9
Q ss_pred CCCHHHHHHHHHhcCcchHHHHhhhcCCchhhhh---cccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhCcc
Q 033691 2 YLSIKDVGLWLEEINLGGYRQIFKENGVNGEYLE---GMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVACLKGEQ 78 (113)
Q Consensus 2 ~WS~EDVa~WLeeiGLgqYre~Fk~N~IdG~~Li---~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva~~~~~~ 78 (113)
.|++++|++||+.+||++|.+.|.+|+|+|..++ .| +++-|..|+. .+.||+-++++.++.++ .-+
T Consensus 19 ~w~~~~V~~WL~~igL~qY~~~F~~~gid~~~~l~~~~l----t~~DL~~lGI--~~~GhRkkIl~ai~~L~-----~~~ 87 (103)
T 2ke7_A 19 RCPVQTVGQWLESIGLPQYENHLMANGFDNVQFMGSNVM----EDQDLLEIGI--LNSGHRQRILQAIQLLP-----KMR 87 (103)
T ss_dssp ----CCTTHHHHHTTCTTCHHHHHHTTCCCHHHHHTTCC----CHHHHHHHTC--CCHHHHHHHHHHHHHSC-----C--
T ss_pred CCCHhHHHHHHHHCCCHHHHHHHHHcCCCcHHHHhcccC----CHHHHhHCCC--CCHHHHHHHHHHHHHHH-----hcc
Confidence 6999999999999999999999999999999986 66 5555777776 88999999999998875 223
Q ss_pred cccCCCCCCcch
Q 033691 79 KVRRPWWAPSCL 90 (113)
Q Consensus 79 ~~~~~~w~p~~~ 90 (113)
+...+-+.|+.+
T Consensus 88 ~~~~~~~~P~~~ 99 (103)
T 2ke7_A 88 PIGHDGYHPTSV 99 (103)
T ss_dssp ------------
T ss_pred cccCCCCCCcCH
Confidence 556677888654
No 14
>2e8n_A Ephrin type-A receptor 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=7.1e-13 Score=87.88 Aligned_cols=76 Identities=25% Similarity=0.292 Sum_probs=65.1
Q ss_pred CHHHHHHHHHhcCcchHHHHhhhcCCc-hhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhCcccccC
Q 033691 4 SIKDVGLWLEEINLGGYRQIFKENGVN-GEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVACLKGEQKVRR 82 (113)
Q Consensus 4 S~EDVa~WLeeiGLgqYre~Fk~N~Id-G~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva~~~~~~~~~~ 82 (113)
+.++|++||+.+||++|.+.|.+|+|+ ++.|..| +++-|..|+. .+.||+-++++.++.++... ..+..
T Consensus 11 ~~~~V~~WL~~lgL~~Y~~~F~~~~~~~~~~l~~l----t~~dL~~lGI--~~~GhRkkIl~ai~~l~~~~----~~~~~ 80 (88)
T 2e8n_A 11 PFRTVSEWLESIKMQQYTEHFMAAGYTAIEKVVQM----TNDDVKRIGV--RLPGHQKRIAYSLLGLKDQV----NTVGI 80 (88)
T ss_dssp SCSSHHHHHHHTTCGGGHHHHHHHTCSSHHHHTTS----CTTHHHHTTC--CSHHHHHHHHHHHHHHHHHH----HCSSC
T ss_pred chhhHHHHHHHCCCHHHHHHHHHcCCChHHHHHhC----CHHHHHHCCC--CChhHHHHHHHHHHHHHHhh----cccCC
Confidence 357999999999999999999999999 8999988 4555777776 78899999999999998664 36678
Q ss_pred CCCCCcc
Q 033691 83 PWWAPSC 89 (113)
Q Consensus 83 ~~w~p~~ 89 (113)
|.+.||.
T Consensus 81 p~~~~~~ 87 (88)
T 2e8n_A 81 PISGPSS 87 (88)
T ss_dssp CCCSSCC
T ss_pred CCCCCCC
Confidence 9999974
No 15
>1wwv_A Connector enhancer of kinase suppressor of RAS 1; structural genomics, protein regulation, transcription; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=99.33 E-value=1.7e-13 Score=93.17 Aligned_cols=64 Identities=16% Similarity=0.252 Sum_probs=55.3
Q ss_pred CCCHHHHHHHHHhc--CcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHHH
Q 033691 2 YLSIKDVGLWLEEI--NLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVAC 73 (113)
Q Consensus 2 ~WS~EDVa~WLeei--GLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva~ 73 (113)
.||++||++||+.+ |+++| .|++|+|+|+.|++|+.=. |+-++. .+.||+-++...++.++-.+
T Consensus 13 ~Wt~~~V~~WL~~l~~~l~~Y--~F~~~~I~G~~LL~Lt~~d----L~~LGI--~~~Ghr~~Il~~I~~L~~~~ 78 (91)
T 1wwv_A 13 TWTPGKVATWLRGLDDSLQDY--PFEDWQLPGKNLLQLCPQS----LEALAV--RSLGHQELILGGVEQLQALS 78 (91)
T ss_dssp TCCTTTHHHHHHHHCHHHHTS--CHHHHCCCHHHHTTCCTTT----GGGGTC--CCHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHhcCCccccc--cHHhcCccHHHHhhCCHHH----HHHcCC--CcHhHHHHHHHHHHHHHHHh
Confidence 69999999999955 89999 8999999999999995443 444554 89999999999999998766
No 16
>1ow5_A Serine/threonine-protein kinase STE11; MAP kinase, MAPKKK, SAM domain, pointed domain, SCM domain, STE50 regulator, transferase; NMR {Saccharomyces cerevisiae} SCOP: a.60.1.2 PDB: 1x9x_A
Probab=99.31 E-value=1.3e-12 Score=90.83 Aligned_cols=60 Identities=23% Similarity=0.282 Sum_probs=56.3
Q ss_pred HHHHHHHHhcCcchHHHHhhhcCCch-hhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHH
Q 033691 6 KDVGLWLEEINLGGYRQIFKENGVNG-EYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKV 71 (113)
Q Consensus 6 EDVa~WLeeiGLgqYre~Fk~N~IdG-~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikv 71 (113)
++|++||.++|++||.+.|.+|+|+| +.|..| +.++|.-|+. .|.||+|++++.++.+|-
T Consensus 16 ~~v~~wL~si~c~qY~~~F~eN~I~g~d~L~eL----d~e~LkElGI--~kvGdRirIlk~vk~Lr~ 76 (85)
T 1ow5_A 16 PFVQLFLEEIGCTQYLDSFIQCNLVTEEEIKYL----DKDILIALGV--NKIGDRLKILRKSKSFQR 76 (85)
T ss_dssp CHHHHHHHHHSCTHHHHHHHHHTCCCHHHHHHC----CHHHHHHHTC--CCHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHcCChhHHHHHHHcCCCcHHHHHHc----CHHHHHHhCC--CcccHHHHHHHHHHHHHH
Confidence 48999999999999999999999999 999999 8999999999 999999999999888774
No 17
>2kso_A Ephrin type-A receptor 2; SAM domain, heterodimer, cell signaling, angiogenesis, apopt ATP-binding, cataract; NMR {Homo sapiens}
Probab=99.29 E-value=4.3e-12 Score=83.96 Aligned_cols=63 Identities=25% Similarity=0.234 Sum_probs=53.9
Q ss_pred CCHHHHHHHHHhcCcchHHHHhhhcCCc-hhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHH
Q 033691 3 LSIKDVGLWLEEINLGGYRQIFKENGVN-GEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKV 71 (113)
Q Consensus 3 WS~EDVa~WLeeiGLgqYre~Fk~N~Id-G~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikv 71 (113)
|+.++|++||+.+||++|.+.|.+|+|+ ++.|..| +++-|..|+. .+.|++-++++.++.++-
T Consensus 14 ~~~~~V~~WL~~lgL~qY~~~F~~~gid~~~~L~~l----t~~DL~~lGI--~~~GhRkkIl~ai~~Lr~ 77 (82)
T 2kso_A 14 GSHMTVSEWLESIKMQQYTEHFMAAGYTAIEKVVQM----TNDDIKRIGV--RLPGHQKRIAYSLLGLKD 77 (82)
T ss_dssp ----CHHHHHHHTTCTTHHHHHHHTTCCSHHHHTTC----CHHHHHHHHC--CCTTHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHCCCHHHHHHHHHcCCChHHHHHhC----CHHHHHHCCC--CChhHHHHHHHHHHHHHH
Confidence 7889999999999999999999999999 8999998 5666777887 889999999999998874
No 18
>2kg5_A ARF-GAP, RHO-GAP domain, ANK repeat and PH domain-containing protein 3; SAM domain, helix bundle, cell membrane, cell projection, cytoplasm; NMR {Homo sapiens}
Probab=99.22 E-value=6.4e-12 Score=86.41 Aligned_cols=63 Identities=17% Similarity=0.308 Sum_probs=55.8
Q ss_pred CCHHHHHHHHHhcCcchHHHHhhhcCCc-hhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHH
Q 033691 3 LSIKDVGLWLEEINLGGYRQIFKENGVN-GEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKV 71 (113)
Q Consensus 3 WS~EDVa~WLeeiGLgqYre~Fk~N~Id-G~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikv 71 (113)
++.++|++||+.+||++|.+.|.+|+|+ |+.|..| +++-|.-|+. .+.||+-++++.++.++.
T Consensus 24 ~~~~~V~~WL~~lgL~qY~~~F~~~gid~~~~L~~L----t~eDLkeLGI--t~~GhRkkIL~aI~~Lr~ 87 (100)
T 2kg5_A 24 PQDLDIAVWLATVHLEQYADTFRRHGLATAGAARGL----GHEELKQLGI--SATGHRKRILRLLQTGTE 87 (100)
T ss_dssp CTTCBHHHHHGGGTCGGGHHHHHHTTCCBHHHHTTC----CHHHHHHHTC--CCHHHHHHHHHHHTTTTT
T ss_pred CCcChHHHHHHHCCCHHHHHHHHHcCCChHHHHHhc----CHHHHHHCCC--CChhHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999 9999999 5666777777 889999999999988773
No 19
>1ucv_A Ephrin type-A receptor 8; receptor oligomerization, developmental regulation, tyrosine kinase, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=99.21 E-value=1.5e-11 Score=80.38 Aligned_cols=64 Identities=23% Similarity=0.349 Sum_probs=55.5
Q ss_pred CHHHHHHHHHhcCcchHHHHhhhcCCc-hhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHHH
Q 033691 4 SIKDVGLWLEEINLGGYRQIFKENGVN-GEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVAC 73 (113)
Q Consensus 4 S~EDVa~WLeeiGLgqYre~Fk~N~Id-G~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva~ 73 (113)
+.++|++||+.+||++|.+.|.+|+|+ ++.|..| +++-|.-|+. .+.||+-++++.++.++-..
T Consensus 6 ~~~~V~~WL~~lgL~~Y~~~F~~~~~d~~~~l~~l----t~~DL~~lGI--~~~GhrkkIl~ai~~l~~~~ 70 (81)
T 1ucv_A 6 SGLTVGDWLDSIRMGRYRDHFAAGGYSSLGMVLRM----NAQDVRALGI--TLMGHQKKILGSIQTMRAQL 70 (81)
T ss_dssp CCSBHHHHHHHTTCGGGHHHHHHTTCCBHHHHTTC----CHHHHHHHTC--CCHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHCCCHHHHHHHHHcCCChHHHHHHc----CHHHHHhCCC--CChhHHHHHHHHHHHHHHHH
Confidence 357999999999999999999999999 7888888 5666666776 78899999999999988554
No 20
>2qkq_A Ephrin type-B receptor 4; ATP-binding, glycoprotein, kinase, membrane, nucleotide- binding, phosphorylation, repeat, signal, transferase; 2.10A {Homo sapiens}
Probab=99.21 E-value=8.8e-12 Score=81.43 Aligned_cols=62 Identities=23% Similarity=0.348 Sum_probs=53.3
Q ss_pred HHHHHHHHHhcCcchHHHHhhhcC-CchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHH
Q 033691 5 IKDVGLWLEEINLGGYRQIFKENG-VNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVA 72 (113)
Q Consensus 5 ~EDVa~WLeeiGLgqYre~Fk~N~-IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva 72 (113)
.++|++||+.+||++|.+.|.+|+ |+|+.|..| +++-|.-|+. .+.||+-++++.++.+|-.
T Consensus 15 ~~~V~~WL~~lgL~~Y~~~F~~~~~~~~~~l~~l----t~~dL~~lGI--~~~GhrkkIl~ai~~l~~~ 77 (83)
T 2qkq_A 15 FGSVGEWLRAIKMGRYEESFAAAGFGSFELVSQI----SAEDLLRIGV--TLAGHQKKILASVQHMKSQ 77 (83)
T ss_dssp CSSHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTC----CHHHHHHHTC--CCHHHHHHHHHHHTTC---
T ss_pred cchHHHHHHHCCCHHHHHHHHHcCCCcHHHHhhC----CHHHHHHCCC--CCHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999 999999999 6666666776 7899999999999887744
No 21
>2eam_A Putative 47 kDa protein; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.20 E-value=3.8e-12 Score=82.69 Aligned_cols=65 Identities=23% Similarity=0.371 Sum_probs=52.4
Q ss_pred CCHHHHHHHHHhcCcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHH
Q 033691 3 LSIKDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIK 70 (113)
Q Consensus 3 WS~EDVa~WLeeiGLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ik 70 (113)
++.++|++||+.+||++|.+.|.+|+|+|.+++....+|. +-|..|+. .+.||+-++++.++.++
T Consensus 10 ~~~~~V~~WL~~lgL~~Y~~~F~~~~i~~~~~l~~~~lt~-~dL~~lGI--~~~ghR~kIl~ai~~L~ 74 (80)
T 2eam_A 10 CPVQTVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMED-QDLLEIGI--LNSGHRQRILQAIQLLP 74 (80)
T ss_dssp CCCCCHHHHHHHHTCGGGHHHHHHTTCCCTTTSSSSSSCT-THHHHSSC--CCHHHHHHHHHHHHHSC
T ss_pred CChhHHHHHHHHCCCHHHHHHHHHcCCChHHHHhhccCCH-HHHHHCCC--CCHHHHHHHHHHHHHHh
Confidence 5678999999999999999999999999998862122333 34555665 78999999999998876
No 22
>1b4f_A EPHB2; SAM domain, EPH receptor, signal transduction, oligomer; 1.95A {Homo sapiens} SCOP: a.60.1.2 PDB: 1f0m_A 1sgg_A
Probab=99.19 E-value=1.9e-11 Score=79.51 Aligned_cols=64 Identities=19% Similarity=0.336 Sum_probs=55.8
Q ss_pred CHHHHHHHHHhcCcchHHHHhhhcCC-chhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHHH
Q 033691 4 SIKDVGLWLEEINLGGYRQIFKENGV-NGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVAC 73 (113)
Q Consensus 4 S~EDVa~WLeeiGLgqYre~Fk~N~I-dG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva~ 73 (113)
+.++|++||+.+||++|.+.|.+|+| +++.|..| +++-|..|+. .+.||+-++++.++.++-..
T Consensus 10 ~~~~v~~WL~~lgL~~Y~~~F~~~~~~~~~~l~~l----t~~dL~~lGI--~~~GhrkkIl~ai~~l~~~~ 74 (82)
T 1b4f_A 10 SFNTVDEWLEAIKMGQYKESFANAGFTSFDVVSQM----MMEDILRVGV--TLAGHQKKILNSIQVMRAQM 74 (82)
T ss_dssp CCSSHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTC----CHHHHHHTTC--CCHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHCCCHHHHHHHHHcCCCCHHHHHhC----CHHHHHHcCC--CCHHHHHHHHHHHHHHHHHH
Confidence 35799999999999999999999999 78999998 6666777776 78899999999999988544
No 23
>2eao_A Ephrin type-B receptor 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.18 E-value=2.3e-11 Score=82.28 Aligned_cols=64 Identities=22% Similarity=0.302 Sum_probs=56.3
Q ss_pred CHHHHHHHHHhcCcchHHHHhhhcCCc-hhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHHH
Q 033691 4 SIKDVGLWLEEINLGGYRQIFKENGVN-GEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVAC 73 (113)
Q Consensus 4 S~EDVa~WLeeiGLgqYre~Fk~N~Id-G~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva~ 73 (113)
+.++|++||+.+||++|.+.|.+|+|+ ++.|..| +++-|..|+. .+.||+-++++.++.++-..
T Consensus 21 ~~~~V~~WL~~lgL~~Y~~~F~~~~~~~~~~L~~l----t~~DL~~lGI--~~~GhRkkIl~ai~~l~~~~ 85 (99)
T 2eao_A 21 AFTTVDDWLSAIKMVQYRDSFLTAGFTSLQLVTQM----TSEDLLRIGI--TLAGHQKKILNSIHSMRVQI 85 (99)
T ss_dssp SCCBHHHHHHTTTCGGGHHHHHHHTCCBHHHHTTC----CHHHHHHHTC--CCHHHHHHHHHHHHHHHHHS
T ss_pred chHHHHHHHHHCCcHHHHHHHHHcCCChHHHHhhC----CHHHHHHCCC--CChhHHHHHHHHHHHHHHHh
Confidence 467999999999999999999999999 8999998 5666777776 78999999999999988554
No 24
>2k4p_A Phosphatidylinositol-3,4,5-trisphosphate 5- phosphatase 2; helix bundle, signaling protein, actin-binding, alternative splicing, cell adhesion; NMR {Homo sapiens} PDB: 2kso_B
Probab=99.16 E-value=1.1e-11 Score=83.57 Aligned_cols=63 Identities=25% Similarity=0.276 Sum_probs=54.8
Q ss_pred CCCHHHHHHHHHhcCcchHHHHhhhcCCch-hhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHH
Q 033691 2 YLSIKDVGLWLEEINLGGYRQIFKENGVNG-EYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIK 70 (113)
Q Consensus 2 ~WS~EDVa~WLeeiGLgqYre~Fk~N~IdG-~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ik 70 (113)
.|++++|++||+.+||++|.+.|.+|+|++ +.|..| +++-|..|+. .+.|++-++++.++.+|
T Consensus 23 ~~~~~~V~eWL~~lgL~qY~~~F~~~g~~~le~l~~l----t~~DL~~lGI--t~~GHRkkIL~aI~~LK 86 (86)
T 2k4p_A 23 GLGEAGMSAWLRAIGLERYEEGLVHNGWDDLEFLSDI----TEEDLEEAGV--QDPAHKRLLLDTLQLSK 86 (86)
T ss_dssp CCCSCSSHHHHHTTTCGGGHHHHHTTTCCCHHHHTTC----CHHHHHHTTC--CCHHHHHHHHHHHHHCC
T ss_pred CCCcCcHHHHHHHCCCHHHHHHHHHcCCChHHHHHhC----CHHHHHHCCC--CCHHHHHHHHHHHHHcC
Confidence 488999999999999999999999999975 777777 5666777776 88999999999988876
No 25
>3h8m_A Ephrin type-A receptor 7; SAM domain, kinase,structural genomics, structural genomics consortium, SGC, alternative splicing, ATP-binding; 2.10A {Homo sapiens}
Probab=99.15 E-value=3.3e-11 Score=81.54 Aligned_cols=63 Identities=21% Similarity=0.329 Sum_probs=55.2
Q ss_pred CCHHHHHHHHHhcCcchHHHHhhhcCCc-hhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHH
Q 033691 3 LSIKDVGLWLEEINLGGYRQIFKENGVN-GEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKV 71 (113)
Q Consensus 3 WS~EDVa~WLeeiGLgqYre~Fk~N~Id-G~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikv 71 (113)
+++++|++||+.+||++|.+.|.+|+|+ ++.|..| +++-|.-|+. ++.|++-++++.++.++-
T Consensus 23 ~~~~~V~~WL~~lgL~qY~~~F~~~g~d~~e~l~~l----t~~DL~~lGI--t~~GHRkkIL~ai~~Lr~ 86 (90)
T 3h8m_A 23 TTFCSVGEWLQAIKMERYKDNFTAAGYNSLESVARM----TIEDVMSLGI--TLVGHQKKIMSSIQTMRA 86 (90)
T ss_dssp CCCSSHHHHHHHTTCGGGHHHHHHTTCCSHHHHHTC----CHHHHHHTTC--CCHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHCChHHHHHHHHHcCCChHHHHhhC----CHHHHHHCCC--CCHHHHHHHHHHHHHHHH
Confidence 6789999999999999999999999999 8888888 5555666776 889999999999998864
No 26
>1b0x_A Protein (EPHA4 receptor tyrosine kinase); protein interaction module, dimerization domain, transferase; 2.00A {Mus musculus} SCOP: a.60.1.2
Probab=99.14 E-value=4.8e-11 Score=80.04 Aligned_cols=63 Identities=19% Similarity=0.311 Sum_probs=54.6
Q ss_pred CHHHHHHHHHhcCcchHHHHhhhcCC-chhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHH
Q 033691 4 SIKDVGLWLEEINLGGYRQIFKENGV-NGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVA 72 (113)
Q Consensus 4 S~EDVa~WLeeiGLgqYre~Fk~N~I-dG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva 72 (113)
+.++|++||+.+||++|.+.|.+|+| +++.|..| +++-|.-|+. .+.||+-++++.++.++-.
T Consensus 25 ~~~~V~~WL~~lgL~~Y~~~F~~~g~~~~~~l~~l----t~~DL~~lGI--~~~GhrkkIl~ai~~L~~~ 88 (94)
T 1b0x_A 25 AVVSVGDWLQAIKMDRYKDNFTAAGYTTLEAVVHM----SQDDLARIGI--TAITHQNKILSSVQAMRTQ 88 (94)
T ss_dssp SSCCHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTC----CHHHHHHHTC--CCHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHCCcHHHHHHHHHcCCCCHHHHhhC----CHHHHHHCCC--CChhHHHHHHHHHHHHHHH
Confidence 46799999999999999999999999 78888888 5555777776 8899999999999988743
No 27
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}
Probab=99.13 E-value=6.3e-12 Score=93.55 Aligned_cols=38 Identities=29% Similarity=0.585 Sum_probs=36.2
Q ss_pred CCCHHHHHHHHHh-cCcchHHHHhhhcCCchhhhhcccc
Q 033691 2 YLSIKDVGLWLEE-INLGGYRQIFKENGVNGEYLEGMSM 39 (113)
Q Consensus 2 ~WS~EDVa~WLee-iGLgqYre~Fk~N~IdG~~Li~Ltk 39 (113)
+||+|||.+||.. .||+||.++|++|+|+|+.|.+|+.
T Consensus 80 nWTvedV~~WL~~~v~LpqY~~~Fr~~~IdG~~LprL~~ 118 (150)
T 2l5y_A 80 NWTLEDTLQWLIEFVELPQYEKNFRDNNVKGTTLPRIAV 118 (150)
T ss_dssp HCCHHHHHHHHHHHTCCTTSHHHHHHHHCSSSTTTTCCS
T ss_pred hCCHHHHHHHHHHcCCcHHHHHHHHHcCCCHHHhhhhhh
Confidence 6999999999988 5999999999999999999999986
No 28
>2dl0_A SAM and SH3 domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.10 E-value=3.8e-11 Score=82.17 Aligned_cols=63 Identities=19% Similarity=0.179 Sum_probs=54.5
Q ss_pred CCCHHHHHHHHHhcCcchHHHHhhhcCCch-hhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHH
Q 033691 2 YLSIKDVGLWLEEINLGGYRQIFKENGVNG-EYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIK 70 (113)
Q Consensus 2 ~WS~EDVa~WLeeiGLgqYre~Fk~N~IdG-~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ik 70 (113)
.|+.++|++||+.+||+||.+.|.+|++++ +.|.+| +++-|..|+. .+-||+-++++.++.++
T Consensus 20 ~~~~~sV~eWL~~igL~qY~~~F~~~g~d~le~l~~l----t~~DL~~lGI--t~~gHrkkIl~ai~~lr 83 (97)
T 2dl0_A 20 PGCISSVSDWLISIGLPMYAGTLSTAGFSTLSQVPSL----SHTCLQEAGI--TEERHIRKLLSAARLFK 83 (97)
T ss_dssp CSCCCSHHHHHHHHTCGGGHHHHHHHTCCSTTSGGGC----CHHHHHHHTC--CCHHHHHHHHHHHHTCC
T ss_pred ccccCcHHHHHHHCCCHHHHHHHHHcCCCcHHHHHhc----CHHHHHHCCC--CCHHHHHHHHHHHHHHH
Confidence 478899999999999999999999999998 678887 5555677776 78999999998888765
No 29
>3tad_C Liprin-beta-1; protein binding; 2.90A {Mus musculus}
Probab=99.08 E-value=9.5e-11 Score=93.05 Aligned_cols=65 Identities=18% Similarity=0.144 Sum_probs=57.4
Q ss_pred CCCHHHHHHHHHhcCcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHH
Q 033691 2 YLSIKDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKV 71 (113)
Q Consensus 2 ~WS~EDVa~WLeeiGLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikv 71 (113)
+|+.|+|++||+++||++|.+.|.+|.+||..|.+| |++.+-+-|+. .+=||+-+|.-+|+.++-
T Consensus 17 ~W~~e~V~~WLe~~GL~~Y~~~f~~n~~dG~~Ll~l---t~~dLe~eLGI--~nplHRkKL~laI~el~~ 81 (265)
T 3tad_C 17 KWTKEQVCSWLAEQGLGSYLSSGKHWIISGQTLLQA---SQQDLEKELGI--KHSLHRKKLQLALQALGS 81 (265)
T ss_dssp GSCHHHHHHHHHHTTCCTTHHHHTTTCSCSHHHHHS---CHHHHHHHTCC--CSHHHHHHHHHHHHHHHH
T ss_pred hCChHHHHHHHHHHCHHHHHHHHHHhCCchHHHHhC---CHHHHHHHhCC--CCHHHHHHHHHHHHHhcc
Confidence 699999999999999999999999999999999887 45555567877 788999999888888874
No 30
>3kka_C Ephrin type-A receptor 2; ATP-binding, kinase, nucleotide-binding, transferase, tyrosine-protein kinase, signal, sterIle alpha motif; 2.40A {Homo sapiens} SCOP: a.60.1.0
Probab=99.07 E-value=8.6e-11 Score=78.94 Aligned_cols=61 Identities=25% Similarity=0.311 Sum_probs=50.9
Q ss_pred CHHHHHHHHHhcCcchHHHHhhhcCCc-hhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHH
Q 033691 4 SIKDVGLWLEEINLGGYRQIFKENGVN-GEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIK 70 (113)
Q Consensus 4 S~EDVa~WLeeiGLgqYre~Fk~N~Id-G~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ik 70 (113)
+.++|++||+.+||++|.+.|.+|+|+ .+.|..| +++-|..|+. ++.|++-++++.++.++
T Consensus 20 ~~~~V~~WL~~lgL~qY~~~F~~~g~d~le~l~~l----t~~DL~~LGI--t~~GHRkkIL~ai~~Lr 81 (86)
T 3kka_C 20 PFRTVSEWLESIKMQQYTEHFMAAGYTAIEKVVQM----TNDDIKRIGV--RLPGHQKRIAYSLLGLK 81 (86)
T ss_dssp ---CHHHHHHHTTCGGGHHHHHHTTCCSHHHHHTC----CHHHHHHTTC--CCHHHHHHHHHHHHHCC
T ss_pred chhHHHHHHHhCCcHHHHHHHHHcCCChHHHHHhC----CHHHHHHCCC--CCHHHHHHHHHHHHHHH
Confidence 568999999999999999999999999 5778888 5666666776 88999999999998875
No 31
>2kiv_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, tandem, signaling protein, alternative splicing, ANK repeat; NMR {Homo sapiens}
Probab=99.06 E-value=1.1e-10 Score=83.16 Aligned_cols=65 Identities=25% Similarity=0.377 Sum_probs=52.1
Q ss_pred CHHHHHHHHHhcCcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHH
Q 033691 4 SIKDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKV 71 (113)
Q Consensus 4 S~EDVa~WLeeiGLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikv 71 (113)
+.++|++||+.+||++|.+.|.+|++||..+..=+.+ +++-|..|+. .+.|++-++...++.++.
T Consensus 13 ~~~~V~~WL~~igL~~Y~~~F~~~g~d~~~~l~~~~l-t~~DL~~lGI--~~~ghRkkil~ai~~L~~ 77 (148)
T 2kiv_A 13 SVQTVGQWLESIGLPQYENHLMANGFDNVQAMGSNVM-EDQDLLEIGI--LNSGHRQRILQAIQLLPK 77 (148)
T ss_dssp -CCBHHHHHHHHSCTTSHHHHHHTTTTBGGGGTSSCC-CHHHHHHHCC--SSTTSHHHHHHHHHHCSC
T ss_pred CcchHHHHHHHCCCHHHHHHHHHcCCCHHHHhhhccC-CHHHHHHCCC--CCHHHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999777631123 4444567776 889999999999988764
No 32
>3hil_A Ephrin type-A receptor 1; ATP-binding, kinase, nucleotide-binding, transferase, tyrosine-protein kinase, signal, sterIle alpha motif; 2.00A {Homo sapiens} PDB: 3kka_A
Probab=99.04 E-value=1.6e-10 Score=77.06 Aligned_cols=59 Identities=20% Similarity=0.272 Sum_probs=51.1
Q ss_pred CHHHHHHHHHhcCcchHHHHhhhcCCc-hhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHH
Q 033691 4 SIKDVGLWLEEINLGGYRQIFKENGVN-GEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRR 68 (113)
Q Consensus 4 S~EDVa~WLeeiGLgqYre~Fk~N~Id-G~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ 68 (113)
+.++|++||+.+||++|.+.|.+|+|+ ++.|..| +++-|.-|+. ++.|++-++++.++.
T Consensus 22 ~~~~V~~WL~~lgL~qY~~~F~~~g~~s~e~l~~l----t~~DL~~lGI--t~~GHRkkIL~aiq~ 81 (82)
T 3hil_A 22 PYRTVSEWLESIRMKRYILHFHSAGLDTMECVLEL----TAEDLTQMGI--TLPGHQKRILCSIQG 81 (82)
T ss_dssp CCSSHHHHHHHTTCGGGHHHHHHTTCCSGGGGTTC----CHHHHHHTTC--CCHHHHHHHHHHHHH
T ss_pred chhHHHHHHHhCCHHHHHHHHHHcCCChHHHHhcC----CHHHHHHCCC--CCHHHHHHHHHHHHh
Confidence 568999999999999999999999999 8888888 4555666776 889999999988875
No 33
>1x40_A ARAP2; ASAP-related protein2, GTPase activity, signal transduction, SAM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=99.02 E-value=3.6e-10 Score=75.72 Aligned_cols=61 Identities=25% Similarity=0.269 Sum_probs=52.0
Q ss_pred HHHHHHHHhcCcchHHHHhhhcCCc-hhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHH
Q 033691 6 KDVGLWLEEINLGGYRQIFKENGVN-GEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVA 72 (113)
Q Consensus 6 EDVa~WLeeiGLgqYre~Fk~N~Id-G~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva 72 (113)
.+|++||+.+||++|.+.|.+|+++ .+.|..| +++-|..|+. .+.||+-++++.++.++--
T Consensus 16 ~~V~~WL~~lgL~qY~~~F~~~g~~~~~~l~~l----t~~DL~~lGI--~~~GHrkkIl~ai~~L~~~ 77 (91)
T 1x40_A 16 VDIKDFLMSINLEQYLLHFHESGFTTVKDCAAI----NDSLLQKIGI--SPTGHRRRILKQLQIILSK 77 (91)
T ss_dssp CBHHHHHHTTTCGGGHHHHHHHTCCBSGGGGGC----CHHHHHHHTC--CCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCcHHHHhhc----CHHHHHHCCC--CCHhHHHHHHHHHHHHHhh
Confidence 5799999999999999999999996 5778888 5555666776 8899999999999988743
No 34
>2lmr_A ODIN, ankyrin repeat and SAM domain-containing protein; signaling protein; NMR {Homo sapiens}
Probab=98.97 E-value=2.6e-10 Score=78.96 Aligned_cols=65 Identities=28% Similarity=0.291 Sum_probs=52.4
Q ss_pred CHHHHHHHHHhcCcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHH
Q 033691 4 SIKDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKV 71 (113)
Q Consensus 4 S~EDVa~WLeeiGLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikv 71 (113)
...+|++||+.+||++|.+.|.+|+|+|.+++.-..+ +++-|..|+. .+.|++-+++..++.++-
T Consensus 28 ~~~~V~eWL~~LgL~qY~~~F~~~g~d~~e~l~~~~L-t~eDL~eLGI--t~~GHRkkIL~aI~~L~~ 92 (101)
T 2lmr_A 28 LEQSVGEWLESIGLQQYESKLLLNGFDDVHFLGSNVM-EEQDLRDIGI--SDPQHRRKLLQAARSLPK 92 (101)
T ss_dssp SSCCHHHHHHHHTCGGGHHHHHHTTCCCTTSTTTSCC-CHHHHHHHTC--CCHHHHHHHHHHHHTSSS
T ss_pred CcccHHHHHHHCCCHHHHHHHHHcCCChHHHHhhccC-CHHHHHHCCC--CCHHHHHHHHHHHHHHHh
Confidence 3468999999999999999999999999876641122 4555777877 889999999998887653
No 35
>3sei_A Caskin-1; SAM domain, protein-protein interaction, signaling protein; 2.40A {Homo sapiens} PDB: 3sen_A
Probab=98.96 E-value=3.7e-10 Score=81.18 Aligned_cols=63 Identities=24% Similarity=0.289 Sum_probs=53.4
Q ss_pred CHHHHHHHHHhcCcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHH
Q 033691 4 SIKDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVA 72 (113)
Q Consensus 4 S~EDVa~WLeeiGLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva 72 (113)
+.++|++||+.+||++|.+.|.+|++||+.|..| +++=|..|+. ++.||+-++...++.++..
T Consensus 9 ~~~~V~~WL~~lgL~~Y~~~F~~~g~d~~~l~~l----t~~DL~~lGI--t~~gHrkkil~ai~~L~~~ 71 (149)
T 3sei_A 9 SSEAVSQWLTAFQLQLYAPNFISAGYDLPTISRM----TPEDLTAIGV--TKPGHRKKIAAEISGLSIP 71 (149)
T ss_dssp HHHHHHHHHHTTTCGGGHHHHHHTTCCHHHHTTC----CHHHHHHTTC--CSHHHHHHHHHHHHTCCCC
T ss_pred cHHHHHHHHHHCCcHHHHHHHHHcCCCHHHHccC----CHHHHHHcCC--CCHHHHHHHHHHHHHHHhc
Confidence 3689999999999999999999999999988887 3444566665 7789999999999887654
No 36
>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain, EF-SAM, STIM1, store operated calcium entry regulator, SOCE; NMR {Homo sapiens}
Probab=98.95 E-value=2.3e-10 Score=85.26 Aligned_cols=39 Identities=18% Similarity=0.424 Sum_probs=36.1
Q ss_pred CCCHHHHHHHHHhc-CcchHHHHhhhcCCchhhhhccccc
Q 033691 2 YLSIKDVGLWLEEI-NLGGYRQIFKENGVNGEYLEGMSMF 40 (113)
Q Consensus 2 ~WS~EDVa~WLeei-GLgqYre~Fk~N~IdG~~Li~Ltk~ 40 (113)
+||+|||..||... ||+||.++|++|+|+|+.|..|+.-
T Consensus 80 nWTvedV~~WL~~~v~LpqY~~~Fr~~~I~G~~LprLa~~ 119 (150)
T 2k60_A 80 NWTVDEVVQWLITYVELPQYEETFRKLQLSGHAMPRLAVT 119 (150)
T ss_dssp HCCHHHHHHHHHHHHCCTTHHHHHHHHCCSTTHHHHHSSC
T ss_pred cCCHHHHHHHHHHcCCcHHHHHHHHHcCCCHHHHHhhccc
Confidence 69999999999665 9999999999999999999999774
No 37
>3k1r_B Usher syndrome type-1G protein; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens}
Probab=98.92 E-value=1.8e-09 Score=70.47 Aligned_cols=63 Identities=16% Similarity=0.216 Sum_probs=53.7
Q ss_pred HHHHHHHHhcCcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhh
Q 033691 6 KDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVACLK 75 (113)
Q Consensus 6 EDVa~WLeeiGLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva~~~ 75 (113)
..|++||+.+|+++|.+.|.+|+||++.|..| +++-|.-|+. . .|++.+++.-++..|-+...
T Consensus 3 ~~v~~wL~~lgL~~Y~~~F~~~~id~e~l~~l----t~~DL~~lGI--~-~G~RkkIl~ai~~~~~~~~~ 65 (74)
T 3k1r_B 3 SPLETFLASLHMEDFAALLRQEKIDLEALMLC----SDLDLRSISV--P-LGPREKILGAVRRRRQAMER 65 (74)
T ss_dssp CHHHHHHHTTTCGGGHHHHHHTTCCHHHHTTC----CHHHHHHTTC--C-HHHHHHHHHHHHHHHHHHHS
T ss_pred chHHHHHHHCCCHHHHHHHHHcCcCHHHHhHC----CHHHHHHcCC--C-cchHHHHHHHHHHHHHHhcC
Confidence 46999999999999999999999999999998 4555555554 4 99999999999999876544
No 38
>3sei_A Caskin-1; SAM domain, protein-protein interaction, signaling protein; 2.40A {Homo sapiens} PDB: 3sen_A
Probab=98.90 E-value=1.5e-09 Score=78.01 Aligned_cols=61 Identities=23% Similarity=0.413 Sum_probs=50.7
Q ss_pred CHHHHHHHHHhcCcchHHHHhhhcCCc-hhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHH
Q 033691 4 SIKDVGLWLEEINLGGYRQIFKENGVN-GEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIK 70 (113)
Q Consensus 4 S~EDVa~WLeeiGLgqYre~Fk~N~Id-G~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ik 70 (113)
.+.+|++||+.|||+||.+.|.+|+|+ ++.|.+| +++-|..|+. .+.||+-+++.-++.++
T Consensus 78 ~p~~v~~WL~~igL~qY~~~F~~~g~d~~~~l~~l----t~~dL~~lGI--~~~gHr~kIl~ai~~l~ 139 (149)
T 3sei_A 78 KPANLAVWLSMIGLAQYYKVLVDNGYENIDFITDI----TWEDLQEIGI--TKLGHQKKLMLAVRKLA 139 (149)
T ss_dssp CCSCHHHHHHHTTCGGGHHHHHHTTCCSHHHHTTC----CHHHHHHHTC--CCHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHcCchhhHHHHHHCCCchHHHHhhC----CHHHHHHCCC--CCHHHHHHHHHHHHHHH
Confidence 356899999999999999999999999 6888888 3555666666 78999999888777665
No 39
>1v38_A SAM-domain protein samsn-1; structural genomics, hypothetical protein, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: a.60.1.2
Probab=98.86 E-value=2.3e-09 Score=70.03 Aligned_cols=62 Identities=19% Similarity=0.154 Sum_probs=50.3
Q ss_pred CCHHHHHHHHHhcCcchHHHHhhhcCCchhh-hhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHH
Q 033691 3 LSIKDVGLWLEEINLGGYRQIFKENGVNGEY-LEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIK 70 (113)
Q Consensus 3 WS~EDVa~WLeeiGLgqYre~Fk~N~IdG~~-Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ik 70 (113)
...++|++||+.+||++|.+.|.+|++++-+ +..| +++-|..|+. .+-||+-+++..++.++
T Consensus 10 ~~~~~V~eWL~~i~L~~Y~~~F~~~gy~~~~~~~~l----t~~DL~~lGI--~~~ghrkkil~ai~~L~ 72 (78)
T 1v38_A 10 ENHQTIQEFLERIHLQEYTSTLLLNGYETLDDLKDI----KESHLIELNI--ADPEDRARLLSAAESLL 72 (78)
T ss_dssp SSCCBHHHHHHTTTCGGGHHHHHHHTCCBHHHHTTC----CHHHHHHTTT--CCHHHHHHHHHHHHHHH
T ss_pred CCcCcHHHHHHHCCCHHHHHHHHHcCCCCHHHHhhc----CHHHHHHcCC--CCHHHHHHHHHHHHHHH
Confidence 3568999999999999999999999998744 4444 4555666776 78999999999888775
No 40
>3tad_C Liprin-beta-1; protein binding; 2.90A {Mus musculus}
Probab=98.83 E-value=7.4e-09 Score=82.23 Aligned_cols=64 Identities=23% Similarity=0.416 Sum_probs=53.4
Q ss_pred CCHHHHHHHHHhcCcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHH
Q 033691 3 LSIKDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVA 72 (113)
Q Consensus 3 WS~EDVa~WLeeiGLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva 72 (113)
++...|++||+.|||+||++.|.+|.|||+-|.+| |++=|+.|+. .+-||+.++...++.+|-.
T Consensus 90 ~d~~wv~~WL~~IGL~QY~~~F~~~~iDg~~L~~L----T~~DL~~LGI--t~~~HR~kil~aI~~L~~~ 153 (265)
T 3tad_C 90 LDFNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYM----TVDDLLSLKV--VSVLHHLSIKRAIQVLRIN 153 (265)
T ss_dssp CCHHHHHHHHHHHTCGGGHHHHHHHTCCHHHHHTC----BHHHHHHTTC--CBHHHHHHHHHHHHHHHHT
T ss_pred cChHHHHHHHHHcCcHHHHHHHHHcCCCHHHhccc----CHHHHHHcCC--CcHHhHHHHHHHHHHHhhc
Confidence 56678999999999999999999999999999888 4444555655 7789999998887777655
No 41
>2dkz_A Hypothetical protein LOC64762; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.70 E-value=9.7e-09 Score=71.43 Aligned_cols=43 Identities=33% Similarity=0.361 Sum_probs=39.3
Q ss_pred CCCHHHHHHHHHhcCcchH-HHHhhhcCCchhhhhcccccchHHHHHH
Q 033691 2 YLSIKDVGLWLEEINLGGY-RQIFKENGVNGEYLEGMSMFTTEQILRF 48 (113)
Q Consensus 2 ~WS~EDVa~WLeeiGLgqY-re~Fk~N~IdG~~Li~Ltk~t~e~ilr~ 48 (113)
.||++||+.||.-+||++| .+.|++|.|||.-|..| +|.||.-
T Consensus 17 ~lSv~EVs~~Lr~igL~e~vv~~F~~e~IDG~lL~~L----~ee~L~e 60 (84)
T 2dkz_A 17 GLSIEEVSKSLRFIGLSEDVISFFVTEKIDGNLLVQL----TEEILSE 60 (84)
T ss_dssp SCCHHHHHHHGGGTCCCHHHHHHHHTTTCCHHHHHHC----CHHHHHH
T ss_pred hcCHHHHHHHHHHcCCcHHHHHHHHHHccchHHHHhC----CHHHHHh
Confidence 5999999999999999985 69999999999999999 7888753
No 42
>2kiv_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, tandem, signaling protein, alternative splicing, ANK repeat; NMR {Homo sapiens}
Probab=98.62 E-value=1.8e-08 Score=71.58 Aligned_cols=60 Identities=22% Similarity=0.408 Sum_probs=47.9
Q ss_pred CCHHHHHHHHHhcCcchHHHHhhhcCCch-hhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHH
Q 033691 3 LSIKDVGLWLEEINLGGYRQIFKENGVNG-EYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELR 67 (113)
Q Consensus 3 WS~EDVa~WLeeiGLgqYre~Fk~N~IdG-~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~ 67 (113)
.++++|++||+.+||++|.+.|.+|+++| +.|..| |.++++..++. .+-||+-+++.-++
T Consensus 86 ~~~~~v~~WL~~i~L~qY~~~F~~~g~~~~~~l~~l---t~~dLl~~lGI--~~~gHrkrIl~ai~ 146 (148)
T 2kiv_A 86 AHPTSVAEWLDSIELGDYTKAFLINGYTSMDLLKKI---AEVELINVLKI--NLIGHRKRILASLG 146 (148)
T ss_dssp CCCSSHHHHHHTTTCCTHHHHHHHHTCCSHHHHTSC---CHHHHHHHTCC--CCHHHHHHHHHHHT
T ss_pred CCcchHHHHHHHCCcHHHHHHHHHcCCChHHHHHhC---CHHHHHHhCCC--CChhHHHHHHHHHh
Confidence 35679999999999999999999999998 566666 45666666766 77899888766543
No 43
>3tac_B Liprin-alpha-2; transferase-protein binding complex; 2.20A {Homo sapiens} PDB: 3tad_A
Probab=98.46 E-value=1.4e-07 Score=77.88 Aligned_cols=61 Identities=20% Similarity=0.221 Sum_probs=50.0
Q ss_pred CCCHHHHHHHHHh-cCcch-HHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHH---HHHHH
Q 033691 2 YLSIKDVGLWLEE-INLGG-YRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITL---CKELR 67 (113)
Q Consensus 2 ~WS~EDVa~WLee-iGLgq-Yre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl---~~El~ 67 (113)
+|+.++|++||++ +||++ |.+.|++|.++|..|.+| |++.|-+-|+. .+=+|+-+| ++|++
T Consensus 38 ~W~~~~V~aWLe~~iGmp~~Yv~~~r~nvkSG~~Ll~L---Sd~dLekeLGI--~nPLHRKKL~LAIqel~ 103 (334)
T 3tac_B 38 QWDGPTVVAWLELWLGMPAWYVAACRANVKSGAIMSAL---SDTEIQREIGI--SNPLHRLKLRLAIQEMV 103 (334)
T ss_dssp GCCHHHHHHHHHHTTCCCHHHHHHHHHHCCSHHHHHTC---CHHHHHHTTCC--CCHHHHHHHHHHHHHHH
T ss_pred hCCcHHHHHHHHHHhcChHHHHHHHHHHccchHHHHhC---CHHHHHHHhCC--CCHHHHHHHHHHHHHHH
Confidence 6999999999999 89998 999999999999998886 56666667776 446777777 45554
No 44
>1uqv_A STE50 protein; SAM, sterIle alpha motif, helical, protein-protein interaction domain, growth arrest, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: a.60.1.2 PDB: 1z1v_A
Probab=98.39 E-value=4.9e-07 Score=62.90 Aligned_cols=63 Identities=17% Similarity=0.342 Sum_probs=52.2
Q ss_pred CCCHHHHHHHH-HhcCcch---HHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHH
Q 033691 2 YLSIKDVGLWL-EEINLGG---YRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIK 70 (113)
Q Consensus 2 ~WS~EDVa~WL-eeiGLgq---Yre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ik 70 (113)
.||+++|+.|+ .++||++ ..+-|++|+|+|.-|..|+ .|. +.-+ |+-++|-++.|-..|.+++
T Consensus 11 ~Wt~~~V~~W~~~~lg~~d~d~~~~~f~~ndItG~vL~eL~---leD-lKEL--~i~s~~~r~~lk~~In~Lr 77 (85)
T 1uqv_A 11 QWSVDDVITWCISTLEVEETDPLCQRLRENDIVGDLLPELC---LQD-CQDL--CDGDLNKAIKFKILINKMR 77 (85)
T ss_dssp TCCHHHHHHHHHHHHSSCTTSTHHHHHHHSCCCGGGHHHHH---HHH-HHHT--SSSCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHhCCCCccHHHHHHHHcCCchhhHHHcC---HHH-HHHh--CchHHHHHHHHHHHHHHHH
Confidence 79999999999 8889998 6788999999999999983 222 3323 3588999999999888887
No 45
>2eap_A Lymphocyte cytosolic protein 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.26 E-value=5.1e-07 Score=63.53 Aligned_cols=37 Identities=5% Similarity=0.139 Sum_probs=33.3
Q ss_pred CCCCHHHHHHHHHhcCcchHHHHhh-hcCCchhhhhccc
Q 033691 1 MYLSIKDVGLWLEEINLGGYRQIFK-ENGVNGEYLEGMS 38 (113)
Q Consensus 1 ~~WS~EDVa~WLeeiGLgqYre~Fk-~N~IdG~~Li~Lt 38 (113)
+.||+++|++||.+.||.+ .+.|- ...|||..|++||
T Consensus 20 ~~Wsp~~VadWLkk~g~~~-cd~lv~Kh~IDG~~lL~Lt 57 (90)
T 2eap_A 20 LGWDPDSLADYFKKLNYKD-CEKAVKKYHIDGARFLNLT 57 (90)
T ss_dssp TTCCTTTHHHHHHHTTCHH-HHHHHHHTTCCHHHHHTCC
T ss_pred cccCHHHHHHHHHHcCCch-HHHHHHHhccCchhhhccc
Confidence 5799999999999999999 67774 7889999999994
No 46
>3tac_B Liprin-alpha-2; transferase-protein binding complex; 2.20A {Homo sapiens} PDB: 3tad_A
Probab=98.23 E-value=7.5e-07 Score=73.60 Aligned_cols=59 Identities=20% Similarity=0.264 Sum_probs=41.4
Q ss_pred HHH-HHHHhcCcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHH
Q 033691 7 DVG-LWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIK 70 (113)
Q Consensus 7 DVa-~WLeeiGLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ik 70 (113)
=|+ .||+.|||+||++.|.+|.|||+-|.+|++-+.+ ..|+. ++-.|..++.--|+-+|
T Consensus 164 WV~~~WL~dIGLpQY~~~F~~~~VDgR~L~~Lt~~DL~---~~LgI--t~~~Hr~sI~~gI~~Lr 223 (334)
T 3tac_B 164 WIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLR---VHLKM--VDSFHRTSLQYGIMCLK 223 (334)
T ss_dssp HHHHTHHHHTTCGGGHHHHHHTTCCHHHHTTCCHHHHH---HTTCC--CCHHHHHHHHHHHHHHH
T ss_pred cchhhhccccChHHhHHHHHhcCcchhhhhhccHHHHH---hccCC--CcHHHHHHHHHHHHHhh
Confidence 467 7999999999999999999999999999544332 33333 34455555544444443
No 47
>2d3d_A VTS1 protein; RNA binding, SAM domain, SRE hairpin binding, RNA binding protein; 1.60A {Saccharomyces cerevisiae} PDB: 2f8k_A 2fe9_A
Probab=97.75 E-value=4.4e-05 Score=52.71 Aligned_cols=63 Identities=16% Similarity=0.176 Sum_probs=50.2
Q ss_pred HHHHHHHHhcCcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhC
Q 033691 6 KDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVACLKG 76 (113)
Q Consensus 6 EDVa~WLeeiGLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva~~~~ 76 (113)
.||.+||+.+||+.|.+.|.++ +=+.+..| ||+=|+-++. .-.|++=++++-++.+|-.-.+|
T Consensus 19 ~~V~~WL~sLrLhKY~~~F~~~--~~~~l~~L----tdedL~~~GV--ta~GaRrKil~aI~~lr~~~~~~ 81 (88)
T 2d3d_A 19 KNIPMWLKSLRLHKYSDALSGT--PWIELIYL----DDETLEKKGV--LALGARRKLLKAFGIVIDYKERD 81 (88)
T ss_dssp TCHHHHHHHTTCGGGHHHHTTS--CHHHHTTC----CHHHHHHTTC--CCHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHcccchhHHHHhcC--CHHHHHHc----CHHHHHHcCC--ccHhHHHHHHHHHHHHHHHHhcC
Confidence 5899999999999999999875 44566666 5555666764 66999999999999888765554
No 48
>2y9t_A Tumor protein 63; apoptosis, sterIle alpha motif, 5-helix bundle; NMR {Homo sapiens}
Probab=97.75 E-value=9.2e-05 Score=49.96 Aligned_cols=63 Identities=6% Similarity=0.078 Sum_probs=51.9
Q ss_pred HHHHHHHhcCcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhh
Q 033691 7 DVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVACLK 75 (113)
Q Consensus 7 DVa~WLeeiGLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva~~~ 75 (113)
.|++||+.||+++|.+.|.++++. .+.++..+|.|. +.+.-+..||.=+...-++.++.....
T Consensus 8 SV~~WLd~i~m~~Y~d~F~~~G~~--sl~~V~~lt~eD----L~~mGIt~gHqkkIl~siq~lr~~~~~ 70 (82)
T 2y9t_A 8 SIVSFLARLGCSSCLDYFTTQGLT--TIYQIEHYSMDD----LASLKIPEQFRHAIWKGILDHRQLHEF 70 (82)
T ss_dssp BHHHHHHHHTCGGGHHHHHTTTCC--BSGGGTTCCHHH----HHHTTCCHHHHHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHcCchHHHHHHHHcCCC--cHHHHHhcCHHH----HHhcCCChhhHHHHHhhHHHHHHHhcc
Confidence 599999999999999999999986 577777888765 455555569999999999988877655
No 49
>2y9u_A Tumor protein 63; apoptosis, sterIle alpha motif, 5-helix bundle, mutations, A syndrome; 1.60A {Homo sapiens} PDB: 1rg6_A
Probab=97.66 E-value=0.0001 Score=48.13 Aligned_cols=61 Identities=7% Similarity=0.114 Sum_probs=48.3
Q ss_pred HHHHHHHhcCcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHHH
Q 033691 7 DVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVAC 73 (113)
Q Consensus 7 DVa~WLeeiGLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva~ 73 (113)
.|++||+.||+++|.+.|.+++.. .+.++..+|.|. +.+.-+..||.=+...-++.++...
T Consensus 6 sv~~WLd~i~m~~Y~d~F~~~g~~--s~~~v~~lt~eD----L~~~GIt~ghqkkIl~siq~lr~~~ 66 (69)
T 2y9u_A 6 SIVSFLARLGCSSCLDYFTTQGLT--TIYQIEHYSMDD----LASLKIPEQFRHAIWKGILDHRQLH 66 (69)
T ss_dssp BHHHHHHTTTCGGGHHHHHTTTCC--BHHHHTTCCHHH----HHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHcCChHHHHHHHHcCCC--cHHHHHHcCHHH----HHhcCCChhhHHHHHHhHHHHHhcc
Confidence 589999999999999999999986 566777777765 4566555688888888888776543
No 50
>2es6_A VTS1P; SAM domain, protein structure, gene regulation; NMR {Saccharomyces cerevisiae} PDB: 2ese_A
Probab=97.65 E-value=6.5e-05 Score=53.30 Aligned_cols=63 Identities=16% Similarity=0.176 Sum_probs=50.8
Q ss_pred HHHHHHHHhcCcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhC
Q 033691 6 KDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVACLKG 76 (113)
Q Consensus 6 EDVa~WLeeiGLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva~~~~ 76 (113)
.||.+||+.+||+.|.+.|.++ +=+++..| ||+=|+-++. .-.|.+=++++-++.+|-.-.+|
T Consensus 32 ~dV~~WLksLrLhKY~~~F~~~--~~~~l~~L----TdedL~~~GV--ta~GARrKiL~aI~~Lr~~k~~~ 94 (101)
T 2es6_A 32 KNIPMWLKSLRLHKYSDALSGT--PWIELIYL----DDETLEKKGV--LALGARRKLLKAFGIVIDYKERD 94 (101)
T ss_dssp TCHHHHHHTTTCCCTHHHHTTS--CHHHHTTC----CHHHHHHHTC--CSHHHHHHHHHHHHHHHHHHTTT
T ss_pred cCHHHHHHHccCcchHHHHccC--CHHHHHhc----CHHHHHHcCC--ccHhHHHHHHHHHHHHHHHHHcC
Confidence 5899999999999999999885 44567766 6666777774 66999999999999888764444
No 51
>2b6g_A VTS1P; alpha-helix, pentaloop, hairpin, RNA binding protein; NMR {Saccharomyces cerevisiae}
Probab=97.60 E-value=0.0001 Score=53.28 Aligned_cols=64 Identities=16% Similarity=0.185 Sum_probs=50.7
Q ss_pred HHHHHHHHHhcCcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhC
Q 033691 5 IKDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVACLKG 76 (113)
Q Consensus 5 ~EDVa~WLeeiGLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva~~~~ 76 (113)
.+||.+||+.+||+.|.+.|.+ ++-++|..| +|+-|+-++. .-.|++=++++-++.++-.--+|
T Consensus 49 ~~dV~~WL~sLrL~KY~~~F~~--~~~d~l~~L----TeeDL~~lGV--ta~GaRrKlL~AI~~Lr~~k~~~ 112 (119)
T 2b6g_A 49 LKNIPMWLKSLRLHKYSDALSG--TPWIELIYL----DDETLEKKGV--LALGARRKLLKAFGIVIDYKERD 112 (119)
T ss_dssp HHCHHHHHHHHTCHHHHHHHTT--SCHHHHTTC----CHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHCCChhHHHHHcc--CCHHHHHhc----CHHHHHHCCC--CccccHHHHHHHHHHHHhhhccc
Confidence 3689999999999999999954 677888888 7777777774 56999988887777776554443
No 52
>2qar_B Telsam domain; polymer, crystallization modules, sterIle alpha motif, hydro regulator; 2.40A {Escherichia coli}
Probab=97.45 E-value=0.0001 Score=50.23 Aligned_cols=62 Identities=27% Similarity=0.328 Sum_probs=44.3
Q ss_pred CCCHHHHHHHHHhcCcchHH-H--HhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHHH
Q 033691 2 YLSIKDVGLWLEEINLGGYR-Q--IFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVAC 73 (113)
Q Consensus 2 ~WS~EDVa~WLeeiGLgqYr-e--~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva~ 73 (113)
.||.+||..||...+ .+|. + -|..-+|||+.|..||+ |. |..|.- ..||. |..-|+.||--+
T Consensus 14 ~WS~~~V~~WL~w~~-~ef~L~~i~~~~f~mdGk~Lc~Lt~---ed---F~~~~p-~~Gdi--L~~hL~~Lk~~~ 78 (93)
T 2qar_B 14 YWSRDDVAQWLKWAE-NEFSLSPIDSNTFEMNGKALLLLTK---ED---FRYRSP-HSGDV--LYELLQHILKQR 78 (93)
T ss_dssp GCCHHHHHHHHHHHH-HHTTCCCCCGGGGCSCHHHHTTCCH---HH---HHHHCT-TTHHH--HHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHH-HhcCCCCcchhcCCCCHHHHHcCCH---HH---HhhhCC-cchHH--HHHHHHHHHHhc
Confidence 699999999998776 7776 2 24455799999999954 33 333332 25886 788888887544
No 53
>1oxj_A RNA-binding protein smaug; SAM domain, PHAT domain; 1.80A {Drosophila melanogaster} SCOP: a.60.1.2 a.118.1.13
Probab=97.14 E-value=0.00029 Score=53.93 Aligned_cols=57 Identities=28% Similarity=0.461 Sum_probs=41.3
Q ss_pred HHHHHHHHHhcCcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHH
Q 033691 5 IKDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIK 70 (113)
Q Consensus 5 ~EDVa~WLeeiGLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ik 70 (113)
..||.+||+.+||+.|.+.|.+.. =+++..| ||+-|+-++. ++ |.+=++++-++++|
T Consensus 7 ~~dV~~WLksLrLhKY~~~F~~~~--~e~~~~L----TdedL~~~GV--T~-GARrKIL~aIq~Lr 63 (173)
T 1oxj_A 7 MSGIGLWLKSLRLHKYIELFKNMT--YEEMLLI----TEDFLQSVGV--TK-GASHKLALCIDKLK 63 (173)
T ss_dssp CTTHHHHHHHTTCGGGGGGGTTCC--HHHHTTC----CHHHHHHTTC--CH-HHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHcccchhHHHHccCC--HHHHHhc----CHHHHHHCCC--ch-HHHHHHHHHHHHHH
Confidence 359999999999999999998754 3466666 4444555554 33 88887777777665
No 54
>1sv0_C Modulator of the activity of ETS CG15085-PA; alpha-helix, 3(10) helix, transcription; 2.07A {Drosophila melanogaster} SCOP: a.60.1.1
Probab=97.14 E-value=0.00047 Score=45.51 Aligned_cols=61 Identities=25% Similarity=0.335 Sum_probs=40.8
Q ss_pred CCCHHHHHHHHHhcCcchHH-H----HhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHH-HHHHH
Q 033691 2 YLSIKDVGLWLEEINLGGYR-Q----IFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELR-RIKVA 72 (113)
Q Consensus 2 ~WS~EDVa~WLeeiGLgqYr-e----~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~-~ikva 72 (113)
.||.+||..||... ..+|. + -|..-++||++|-.||+ |. |.+|+- .-||. |-..|+ +|+-|
T Consensus 13 ~Ws~~~V~~WL~w~-~~e~~l~l~~~~~~~f~m~G~~Lc~ls~---ed---F~~~~p-~~Gdi--L~~hL~~~l~~~ 79 (82)
T 1sv0_C 13 DWTRADVWKWLINM-AVSEGLEVTAELPQKFPMNGKALCLMSL---DM---YLCRVP-VGGKM--LYRDFRVRLARA 79 (82)
T ss_dssp GCCHHHHHHHHHHH-HHHHTCCCCTHHHHTCCSCHHHHHHCCH---HH---HHHHCT-TTHHH--HHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHH-HHHhCCCCCCCccccCCCCHHHHHhCCH---HH---HHhhCC-CchHH--HHHHHHHHHHHH
Confidence 69999999999644 33331 1 14444699999999954 32 666655 67887 667777 44444
No 55
>1ji7_A ETS-related protein TEL1; helical polymer, transcription; 1.45A {Homo sapiens} SCOP: a.60.1.1 PDB: 2qar_A 2qb0_A 1lky_A 1lky_B 2qb1_A
Probab=96.87 E-value=0.00025 Score=48.04 Aligned_cols=61 Identities=26% Similarity=0.304 Sum_probs=41.1
Q ss_pred CCCHHHHHHHHHhcCcchHH-H--HhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHH
Q 033691 2 YLSIKDVGLWLEEINLGGYR-Q--IFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVA 72 (113)
Q Consensus 2 ~WS~EDVa~WLeeiGLgqYr-e--~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva 72 (113)
.||+++|..||... ..+|. + .|..-+|||++|..||+ |. |..|.- ..||.+ -..|+.+|-+
T Consensus 14 ~WS~~~V~~WL~w~-~~ef~L~~~~~~~f~mdGk~Lc~Ls~---ed---F~~~~p-~~GdiL--~~hL~~l~~~ 77 (89)
T 1ji7_A 14 YWSRDDVAQWLKWA-ENEFSLRPIDSNTFEMNGKALLLLTK---ED---FRYRSP-HSGDEL--YELLQHILKQ 77 (89)
T ss_dssp GCCHHHHHHHHHHH-HHHTTCSCCCTTTTCSCHHHHTTCCH---HH---HHHHCT-TTHHHH--HHHHHHHHHC
T ss_pred hCCHHHHHHHHHHH-HHhcCCCCCchhcCCCCHHHHHcCCH---HH---HHhHcC-CchHHH--HHHHHHHHhC
Confidence 69999999999766 55555 1 24445799999999954 33 444433 348874 4677777653
No 56
>1wwu_A Hypothetical protein FLJ21935; structural genomics, protein regulation, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens}
Probab=96.21 E-value=0.003 Score=44.70 Aligned_cols=41 Identities=15% Similarity=0.179 Sum_probs=36.0
Q ss_pred CCHHHHHHHHHhcCcchH-HHHhhhcCCchhhhhcccccchHHH
Q 033691 3 LSIKDVGLWLEEINLGGY-RQIFKENGVNGEYLEGMSMFTTEQI 45 (113)
Q Consensus 3 WS~EDVa~WLeeiGLgqY-re~Fk~N~IdG~~Li~Ltk~t~e~i 45 (113)
=+++||.+||...||..| .++|. +.+|..|.+|++=..++|
T Consensus 24 Ssp~EV~~WL~~kgFS~~tv~~Lg--~ltGaqLf~Ltk~eL~~v 65 (99)
T 1wwu_A 24 SGPDEVRAWLEAKAFSPRIVENLG--ILTGPQLFSLNKEELKKV 65 (99)
T ss_dssp CCHHHHHHHHHHHTCCTTHHHHTT--SSCHHHHHTCCHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHHHHHHHc--CCCHHHHHcCCHHHHHHH
Confidence 378999999999999999 99995 799999999988666665
No 57
>2e8m_A Epidermal growth factor receptor kinase substrate 8; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.15 E-value=0.0029 Score=44.83 Aligned_cols=40 Identities=18% Similarity=0.246 Sum_probs=35.2
Q ss_pred CHHHHHHHHHhcCcchH-HHHhhhcCCchhhhhcccccchHHH
Q 033691 4 SIKDVGLWLEEINLGGY-RQIFKENGVNGEYLEGMSMFTTEQI 45 (113)
Q Consensus 4 S~EDVa~WLeeiGLgqY-re~Fk~N~IdG~~Li~Ltk~t~e~i 45 (113)
+++||.+||...||..| .++|. +.+|..|.+|++=..++|
T Consensus 35 sp~EV~~WL~~kgFS~~tv~~Lg--~ltGaqLl~Ltk~eL~~v 75 (99)
T 2e8m_A 35 TPEDVKTWLQSKGFNPVTVNSLG--VLNGAQLFSLNKDELRTV 75 (99)
T ss_dssp CTTHHHHHHHHHTCCHHHHHHTS--SSCHHHHHHCCHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHHHHHc--CCCHHHHHcCCHHHHHHH
Confidence 78999999999999998 99995 699999999987655554
No 58
>1x66_A Friend leukemia integration 1 transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.17 E-value=0.022 Score=38.98 Aligned_cols=59 Identities=25% Similarity=0.422 Sum_probs=38.8
Q ss_pred CCCHHHHHHHHH----hcCcchH-HHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHH
Q 033691 2 YLSIKDVGLWLE----EINLGGY-RQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIK 70 (113)
Q Consensus 2 ~WS~EDVa~WLe----eiGLgqY-re~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ik 70 (113)
.||.++|..||. +.+|... .+.| +++||++|-.||+ |+ |.+++--.-||. |-.-|+.+|
T Consensus 26 ~Ws~~~V~~WL~W~~~ef~L~~v~~~~F--~~m~G~~LC~ls~---ed---F~~~~~~~~Gdi--L~~hL~~Lk 89 (98)
T 1x66_A 26 LWTQEHVRQWLEWAIKEYSLMEIDTSFF--QNMDGKELCKMNK---ED---FLRATTLYNTEV--LLSHLSYLR 89 (98)
T ss_dssp GCCTTHHHHHHHHHHHHTTCCSCCGGGG--TTCCHHHHHHCCH---HH---HHTTSCHHHHHH--HHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHhcCCCCCChhhC--CCCCHHHHHcCCH---HH---HHHHcCCCchHH--HHHHHHHHH
Confidence 699999999985 4566544 1222 4799999999964 33 555542234776 555666655
No 59
>1sv0_A ETS DNA-binding protein pokkuri; alpha-helix, 3(10) helix, transcription; 2.07A {Drosophila melanogaster} SCOP: a.60.1.1 PDB: 1sv4_A
Probab=94.34 E-value=0.025 Score=37.97 Aligned_cols=59 Identities=27% Similarity=0.412 Sum_probs=39.4
Q ss_pred CCCHHHHHHHHH----hcCcchH-HHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHH
Q 033691 2 YLSIKDVGLWLE----EINLGGY-RQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVA 72 (113)
Q Consensus 2 ~WS~EDVa~WLe----eiGLgqY-re~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva 72 (113)
.||.++|..||. +.+|+.- ...| ++||++|-.||+ |+ |.+|+- .-||.+ -.-|+.+|-+
T Consensus 12 ~Ws~~~V~~WL~W~~~ef~L~~i~~~~F---~m~G~~LC~ls~---ed---F~~~~p-~~GdiL--~~hL~~Lk~~ 75 (85)
T 1sv0_A 12 LWSREDVLVFLRFCVREFDLPKLDFDLF---QMNGKRLCLLTR---AD---FGHRCP-GAGDVL--HNVLQMLIIE 75 (85)
T ss_dssp GCCHHHHHHHHHHHHHHTTCCCCCGGGG---CSCHHHHTTCCH---HH---HHHHST-TTHHHH--HHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHccCCCCCChhhC---CCCHHHHHcCCH---HH---HHHHcC-CchHHH--HHHHHHHHHh
Confidence 599999999996 4566543 1334 599999999964 43 666654 468864 4445555543
No 60
>2h80_A STAR-related lipid transfer protein 13; helical bundle, lipid binding protein; NMR {Homo sapiens} SCOP: a.60.1.3 PDB: 2jw2_A
Probab=93.80 E-value=0.033 Score=38.64 Aligned_cols=24 Identities=21% Similarity=0.534 Sum_probs=21.7
Q ss_pred HHHHHHHHHhcCcchHHHHhhhcC
Q 033691 5 IKDVGLWLEEINLGGYRQIFKENG 28 (113)
Q Consensus 5 ~EDVa~WLeeiGLgqYre~Fk~N~ 28 (113)
..|.++||+.-||+||-+.|+++.
T Consensus 21 A~eAC~WLRaaGFPQYAqlyed~q 44 (81)
T 2h80_A 21 AKEACDWLRAAGFPQYAQLYEDSQ 44 (81)
T ss_dssp HHHHHHHHHHTTCHHHHHTTTTTC
T ss_pred HHHHHHHHHHcCCcHHHHHhhccc
Confidence 457899999999999999999984
No 61
>2dky_A RHO-GTPase-activating protein 7; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.60.1.3 PDB: 2gyt_A 2kap_A
Probab=92.99 E-value=0.059 Score=38.02 Aligned_cols=24 Identities=21% Similarity=0.434 Sum_probs=21.8
Q ss_pred HHHHHHHHHhcCcchHHHHhhhcC
Q 033691 5 IKDVGLWLEEINLGGYRQIFKENG 28 (113)
Q Consensus 5 ~EDVa~WLeeiGLgqYre~Fk~N~ 28 (113)
..|-++||..-||+||-+.|+++.
T Consensus 23 A~eAC~WLRaaGFPQYAqlyed~~ 46 (91)
T 2dky_A 23 AKEACDWLRATGFPQYAQLYEDFL 46 (91)
T ss_dssp HHHHHHHHHHHTCTTHHHHHHTTC
T ss_pred HHHHHHHHHHcCChHHHHhccccc
Confidence 467899999999999999999984
No 62
>1sxd_A GA repeat binding protein, alpha; alpha helical, transcription, signaling protein; NMR {Mus musculus} SCOP: a.60.1.1
Probab=92.94 E-value=0.049 Score=36.91 Aligned_cols=57 Identities=21% Similarity=0.417 Sum_probs=37.7
Q ss_pred CCCHHHHHHHHH----hcCcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHH
Q 033691 2 YLSIKDVGLWLE----EINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIK 70 (113)
Q Consensus 2 ~WS~EDVa~WLe----eiGLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ik 70 (113)
.||.++|..||. +.+|+... |..=++||++|-.||+ |+ |.+|+- . ||. |-.-|+.+|
T Consensus 25 ~Ws~~~V~~WL~W~~~ef~L~~v~--~~~f~m~G~~LC~ls~---ed---F~~~~p-~-Gdi--L~~hL~~L~ 85 (91)
T 1sxd_A 25 HWSTDQVLHWVVWVMKEFSMTDID--LTTLNISGRELCSLNQ---ED---FFQRVP-R-GEI--LWSHLELLR 85 (91)
T ss_dssp GCCHHHHHHHHHHHHHHTTCCCSC--SGGGCSCHHHHHHSCH---HH---HHHHCT-T-CHH--HHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHccCCCCCC--hhhCCCCHHHHHcCCH---HH---HHHHCC-C-chH--HHHHHHHHH
Confidence 599999999985 45666442 2233799999999954 43 666653 4 984 344444443
No 63
>2jv3_A ETS1 proto-oncogene; ETS-1 pointed (PNT) domain, MAP kinase phosphorylation site, alpha-helical bundle, transcription factor, DNA-binding, nucleus; NMR {Mus musculus} PDB: 2kmd_A*
Probab=92.58 E-value=0.037 Score=38.75 Aligned_cols=49 Identities=27% Similarity=0.445 Sum_probs=32.9
Q ss_pred CCCHHHHHHHHH----hcCcchHH-HHhhhcCCchhhhhcccccchHHHHHHHHHhhhcc-hhHH
Q 033691 2 YLSIKDVGLWLE----EINLGGYR-QIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKW-GDFI 60 (113)
Q Consensus 2 ~WS~EDVa~WLe----eiGLgqYr-e~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~-Gd~i 60 (113)
.||.++|..||. +.+|+... .-| ++||++|-.||+ |+ |.+|+ ..+ ||.+
T Consensus 43 ~WS~~~V~~WL~W~~~ef~L~~v~~~~F---~m~G~~LC~ls~---ed---F~~~~-p~~~GdiL 97 (110)
T 2jv3_A 43 QWTETHVRDWVMWAVNEFSLKGVDFQKF---CMSGAALCALGK---EC---FLELA-PDFVGDIL 97 (110)
T ss_dssp TCCHHHHHHHHHHHHHHHTCCCCCTTTT---CCCHHHHHHTHH---HH---HHHHS-CHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHhcCCCCCChhcC---CCCHHHHHhCCH---HH---HHHHc-CCCcHHHH
Confidence 699999999984 45666531 334 699999999954 33 55553 233 6653
No 64
>1sxe_A Transcriptional regulator ERG; alpha helical, signaling protein; NMR {Homo sapiens} SCOP: a.60.1.1
Probab=92.44 E-value=0.065 Score=36.67 Aligned_cols=36 Identities=28% Similarity=0.384 Sum_probs=26.9
Q ss_pred CCCHHHHHHHHH----hcCcchHHHHhhh-cCCchhhhhcccc
Q 033691 2 YLSIKDVGLWLE----EINLGGYRQIFKE-NGVNGEYLEGMSM 39 (113)
Q Consensus 2 ~WS~EDVa~WLe----eiGLgqYre~Fk~-N~IdG~~Li~Ltk 39 (113)
.||.++|..||. +.+|...- +.. +++||++|-.||+
T Consensus 29 ~Ws~~~V~~WL~W~~~ef~L~~i~--~~~F~~m~G~~LC~lt~ 69 (97)
T 1sxe_A 29 LWSTDHVRQWLEWAVKEYGLPDVN--ILLFQNIDGKELCKMTK 69 (97)
T ss_dssp SCCHHHHHHHHHHHHHHHTCSSCC--GGGSTTCCHHHHTTCCH
T ss_pred ccCHHHHHHHHHHHHHhcCCCCCC--HHhcCCCCHHHHHhCCH
Confidence 699999999985 55775431 333 3699999999964
No 65
>1dxs_A P53-like transcription factor; P73 SAM-like domain, gene regulation, P53 P63 homologue, sterIle alpha motif, tumour supressor; 2.54A {Homo sapiens} SCOP: a.60.1.2 PDB: 1cok_A
Probab=91.06 E-value=0.1 Score=35.85 Aligned_cols=44 Identities=11% Similarity=0.221 Sum_probs=34.0
Q ss_pred HHHHHHHhcCcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchh
Q 033691 7 DVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGD 58 (113)
Q Consensus 7 DVa~WLeeiGLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd 58 (113)
-|+.||..+|++.|-+-|++++..- +.+|-.|| ++++.. ||+|+
T Consensus 8 Sv~s~Lt~LGc~~~Id~F~~qgl~~--i~qL~~~~----ledL~~--mkIpe 51 (80)
T 1dxs_A 8 SLVSFLTGLGCPNCIEYFTSQGLQS--IYHLQNLT----IEDLGA--LKIPE 51 (80)
T ss_dssp CHHHHHHHTTCTTSHHHHHTTTCCC--HHHHHTCC----HHHHHH--TTCCT
T ss_pred cHHHHHHhcCchHHHHHHHHcCccc--chhhccCC----HHHHHh--CCCCH
Confidence 4899999999999999999999863 44554455 455666 88884
No 66
>2dkx_A SAM pointed domain-containing ETS transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.38 E-value=0.12 Score=35.27 Aligned_cols=59 Identities=29% Similarity=0.253 Sum_probs=39.4
Q ss_pred CCCHHHHHHHHH----hcCcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHH
Q 033691 2 YLSIKDVGLWLE----EINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKV 71 (113)
Q Consensus 2 ~WS~EDVa~WLe----eiGLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikv 71 (113)
.||.++|..||. +.+|+... +..-++||++|-.||+ |. |.+|.- .-||.+ -.-|+.+|-
T Consensus 26 ~Ws~~~V~~WL~W~~~ef~L~~i~--~~~f~m~G~~LC~lsk---ed---F~~~~p-~~GdiL--~~hL~~Lk~ 88 (96)
T 2dkx_A 26 DWSPSNVQKWLLWTEHQYRLPPMG--KAFQELAGKELCAMSE---EQ---FRQRSP-LGGDVL--HAHLDIWKS 88 (96)
T ss_dssp GCCSSTHHHHHHHHHHHTTCCCCH--HHHSSCCHHHHHHSCH---HH---HHHHCS-SSTHHH--HHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHhcCCCCCC--cccCCCCHHHHHhCCH---HH---HHHHcC-cchHHH--HHHHHHHHh
Confidence 699999999985 55777644 2334599999999954 44 555543 458863 444544443
No 67
>2ytu_A Friend leukemia integration 1 transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.78 E-value=0.46 Score=34.24 Aligned_cols=61 Identities=23% Similarity=0.326 Sum_probs=39.2
Q ss_pred CCCHHHHHHHHH----hcCcchHHHHhhh-cCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHHH
Q 033691 2 YLSIKDVGLWLE----EINLGGYRQIFKE-NGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKVA 72 (113)
Q Consensus 2 ~WS~EDVa~WLe----eiGLgqYre~Fk~-N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikva 72 (113)
.||.++|..||. +.+|..-. +.. +++||++|-.||+ |+ |++++----||. |-.-|+.||-+
T Consensus 40 ~WS~~~V~~WL~Wa~~ef~L~~id--~~~Fq~mnGk~LC~Lsk---eD---F~~~~p~~~GDi--L~~hL~~Lr~~ 105 (128)
T 2ytu_A 40 LWTQEHVRQWLEWAIKEYSLMEID--TSFFQNMDGKELCKMNK---ED---FLRATTLYNTEV--LLSHLSYLRES 105 (128)
T ss_dssp GCCTTHHHHHHHHHHHHTCCCSCC--CGGGSSCCTTHHHHCCH---HH---HHHHSCHHHHHH--HHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHhcCCCCCC--hHhCCCCCHHHHHcCCH---HH---HHHHcCCCchHH--HHHHHHHHHhc
Confidence 599999999985 45665421 222 2699999999964 43 556642224886 44566666644
No 68
>2qb0_B Telsam domain - lysozyme chimera; helical polymer, hydrolase regulator; 2.56A {Escherichia coli}
Probab=88.51 E-value=0.17 Score=38.33 Aligned_cols=36 Identities=31% Similarity=0.412 Sum_probs=26.2
Q ss_pred CCCHHHHHHHHH----hcCcchHHHHhhhcCCchhhhhcccc
Q 033691 2 YLSIKDVGLWLE----EINLGGYRQIFKENGVNGEYLEGMSM 39 (113)
Q Consensus 2 ~WS~EDVa~WLe----eiGLgqYre~Fk~N~IdG~~Li~Ltk 39 (113)
.||.++|..||. +..|+... |..=.+||++|-+||+
T Consensus 14 ~Wt~~~V~~Wl~w~~~~f~l~~~~--~~~f~~~G~~Lc~m~~ 53 (241)
T 2qb0_B 14 YWSRDDVAQWLKWAENEFSLRPID--SNTFEMNGKALLLLTK 53 (241)
T ss_dssp GCCHHHHHHHHHHHHHHTTCSCCC--TTTTCSCHHHHTTCCH
T ss_pred hCCHHHHHHHHHHHHHhcCCCCCC--HHhcCCChHHHHHcCH
Confidence 699999999996 45666541 2333499999888854
No 69
>2e8p_A ELF3 protein; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.39 E-value=0.72 Score=31.54 Aligned_cols=49 Identities=16% Similarity=0.189 Sum_probs=34.1
Q ss_pred CCCHHHHHHHHHhc----Ccc--hH-HHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHH
Q 033691 2 YLSIKDVGLWLEEI----NLG--GY-RQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFI 60 (113)
Q Consensus 2 ~WS~EDVa~WLeei----GLg--qY-re~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~i 60 (113)
.||.++|..||.-- +|. .- ..-| +|||+.|=+||+ |+ |++|+-- -||.+
T Consensus 26 ~Ws~~~V~~WL~Wavke~~~dl~~i~~~~f---~m~G~~LC~msk---ed---F~~~~p~-~GdiL 81 (92)
T 2e8p_A 26 FWSKTQVLDWISYQVEKNKYDASAIDFSRC---DMDGATLCNCAL---EE---LRLVFGP-LGDQL 81 (92)
T ss_dssp GCCHHHHHHHHHHHHHHTTCCCSSCCTTTC---CCCSHHHHHSCH---HH---HHHHSGG-GHHHH
T ss_pred hcCHHHHHHHHHHHHHHhCCCCCCCChhhc---CCCHHHHHcCCH---HH---HHHHcCC-cHHHH
Confidence 59999999999633 442 22 2234 699999999964 43 7777654 78864
No 70
>3idw_A Actin cytoskeleton-regulatory complex protein SLA; clathrin adaptor, endocytosis, SAM domain, yeast, actin-BIND membrane, endosome; 1.85A {Saccharomyces cerevisiae}
Probab=79.96 E-value=2.2 Score=28.66 Aligned_cols=42 Identities=19% Similarity=0.403 Sum_probs=34.9
Q ss_pred hHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHH
Q 033691 19 GYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELR 67 (113)
Q Consensus 19 qYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~ 67 (113)
.|-..|.+|.|+-.-|.-| +..+||-++. +-||.|...|=|.
T Consensus 21 rYA~~F~~~ri~e~mL~Dl----~~~~Lr~LGi---~eGDIIrVmk~l~ 62 (72)
T 3idw_A 21 RYTINFDREQLTEDMMPDI----NNSMLRTLGL---REGDIVRVMKHLD 62 (72)
T ss_dssp HHHHHHHHTTCCGGGGGGC----CHHHHHHTTC---CHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCHHHHhhC----CHHHHHHcCC---chhhHHHHHHHHH
Confidence 5999999999999999999 6677887776 4699998876554
No 71
>3lm3_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.44A {Parabacteroides distasonis}
Probab=76.27 E-value=0.12 Score=44.22 Aligned_cols=57 Identities=26% Similarity=0.454 Sum_probs=43.8
Q ss_pred HHHHHHHHhcCcchHHHHhhhcCCchhhhhcccc-------cchHHHHHHHHHhhhcchhHHHH
Q 033691 6 KDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSM-------FTTEQILRFIRRCHMKWGDFITL 62 (113)
Q Consensus 6 EDVa~WLeeiGLgqYre~Fk~N~IdG~~Li~Ltk-------~t~e~ilr~i~r~~~k~Gd~itl 62 (113)
+|=.+|=.-.|...+|++|..|+=||+--=.|+- =...||++|+-+|+-|+||-|++
T Consensus 45 rDE~~wHtl~gVr~~reAfa~~~Pn~rlTWa~t~~aled~rp~yrqIr~Yv~~c~~kyGDEV~~ 108 (449)
T 3lm3_A 45 RDEVDWHTLEGVRALREAFATNNPNGRLTWGFTMNALEDGRKNYREIRDYVVECQKKYGDEVTY 108 (449)
T ss_dssp CCCGGGCCHHHHHHHHHHHHTTCTTCCCEEEECHHHHHCCSHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred cccchhhHHHHHHHHHHHHHhcCCCceEEEEEEEeecccCChhHHHHHHHHHHHHHHhCCceee
Confidence 3445566667888999999999999985444431 12469999999999999998875
No 72
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=74.32 E-value=2.7 Score=28.22 Aligned_cols=49 Identities=12% Similarity=0.217 Sum_probs=34.2
Q ss_pred CCHHHHHHHHHhcCcchHHHHhhhcCCchhhhh-cccccchHHHHHHHHH
Q 033691 3 LSIKDVGLWLEEINLGGYRQIFKENGVNGEYLE-GMSMFTTEQILRFIRR 51 (113)
Q Consensus 3 WS~EDVa~WLeeiGLgqYre~Fk~N~IdG~~Li-~Ltk~t~e~ilr~i~r 51 (113)
++.+++..|+...|++.+++.|..++-.=++|. .-..+|.+++++.+-.
T Consensus 41 ~t~~eL~~~l~~~g~~~~~~l~n~~~~~~k~l~l~~~~ls~~~~~~lm~~ 90 (119)
T 3f0i_A 41 PSVEELKRLYQQLGLNEVRAMMRCKEELYKELNLGDSQLSDDALFAAMAE 90 (119)
T ss_dssp CCHHHHHHHHHHHTCSSGGGGBCTTSHHHHHTTTTCTTCCHHHHHHHHHH
T ss_pred CcHHHHHHHHHHcCCccHHHHhcCCCchhhhcCcccccCCHHHHHHHHHh
Confidence 688999999999998877777766554444431 1124688888887654
No 73
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=66.02 E-value=6 Score=26.58 Aligned_cols=49 Identities=16% Similarity=0.217 Sum_probs=33.9
Q ss_pred CCHHHHHHHHHhcCcchHHHHhhhcCCchhhhh-cccccchHHHHHHHHH
Q 033691 3 LSIKDVGLWLEEINLGGYRQIFKENGVNGEYLE-GMSMFTTEQILRFIRR 51 (113)
Q Consensus 3 WS~EDVa~WLeeiGLgqYre~Fk~N~IdG~~Li-~Ltk~t~e~ilr~i~r 51 (113)
++.+++..|+...|+.+.++.|..++-.=++|. .-..+|.++++..+-.
T Consensus 42 ~~~~eL~~~l~~~g~~~~~~l~n~~~~~~k~l~l~~~~ls~~~~~~lm~~ 91 (121)
T 3rdw_A 42 PSVDKLKELLQQLGFSDARQLMRTKEDLYKTLNLDDRGLTQDQLLQAMAD 91 (121)
T ss_dssp CCHHHHHHHHHHTTCSSGGGGBCTTSHHHHHTTTTCTTCCHHHHHHHHHH
T ss_pred CcHHHHHHHHHhcCCcCHHHHhcCCChhhhhcCcccccCCHHHHHHHHHh
Confidence 688999999999998567777766654433331 1234578888887654
No 74
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=58.39 E-value=12 Score=24.73 Aligned_cols=48 Identities=15% Similarity=0.198 Sum_probs=27.9
Q ss_pred CCHHHHHHHHHhcCcchHHHHhhhcCCchhhhh-cccccchHHHHHHHHH
Q 033691 3 LSIKDVGLWLEEINLGGYRQIFKENGVNGEYLE-GMSMFTTEQILRFIRR 51 (113)
Q Consensus 3 WS~EDVa~WLeeiGLgqYre~Fk~N~IdG~~Li-~Ltk~t~e~ilr~i~r 51 (113)
++.+++.+|+...|++ +++.|..++-.=++|. .....|.++++..+-.
T Consensus 37 ~~~~el~~~l~~~~~~-~~~l~n~~~~~~k~l~~~~~~ls~~~~~~~m~~ 85 (120)
T 3l78_A 37 LSRDELLKILSYTENG-TEDIISTRSKVFQKLDIDVDELSVSELINLISK 85 (120)
T ss_dssp CCHHHHHHHHHHCSST-HHHHBCTTCHHHHHTTCCGGGCCHHHHHHHHHH
T ss_pred CcHHHHHHHHhhcCCC-HHHhhcCCcHHHHHcCCCcccCCHHHHHHHHHh
Confidence 5677888888877765 6666655443333321 1223567777766544
No 75
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=57.33 E-value=10 Score=25.42 Aligned_cols=48 Identities=15% Similarity=0.309 Sum_probs=31.2
Q ss_pred CCHHHHHHHHHhcCcchHHHHhhhcCCchhhhh---cccccchHHHHHHHHH
Q 033691 3 LSIKDVGLWLEEINLGGYRQIFKENGVNGEYLE---GMSMFTTEQILRFIRR 51 (113)
Q Consensus 3 WS~EDVa~WLeeiGLgqYre~Fk~N~IdG~~Li---~Ltk~t~e~ilr~i~r 51 (113)
++.+++.+|+...|++ +++.|..++-.=++|. .+...|.++++..+-.
T Consensus 40 ~~~~eL~~~l~~~g~~-~~~l~n~~~~~~k~l~l~~~~~~ls~~~~~~lm~~ 90 (120)
T 3fz4_A 40 PAASLIRNWLENSGLE-LKKFFNTSGQSYRALGLKDKLHQLSLDEAANLLAS 90 (120)
T ss_dssp CCHHHHHHHHHHSCCC-GGGGBCTTSHHHHHTTHHHHGGGCCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCC-HHHHhCCCCcchhhcCcccccccCCHHHHHHHHHh
Confidence 6788899999998875 6677755554434432 1234577887776644
No 76
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=53.65 E-value=11 Score=25.20 Aligned_cols=48 Identities=17% Similarity=0.388 Sum_probs=31.5
Q ss_pred CCHHHHHHHHHhcCcchHHHHhhhcCCchhhhh---cccccchHHHHHHHHH
Q 033691 3 LSIKDVGLWLEEINLGGYRQIFKENGVNGEYLE---GMSMFTTEQILRFIRR 51 (113)
Q Consensus 3 WS~EDVa~WLeeiGLgqYre~Fk~N~IdG~~Li---~Ltk~t~e~ilr~i~r 51 (113)
++.+++..|+...|++ +++.|..++-.=++|. .+...|.++++..+-.
T Consensus 41 ~~~~eL~~~l~~~g~~-~~~l~n~~~~~~k~l~l~~k~~~ls~~~~~~lm~~ 91 (120)
T 3gkx_A 41 PTVEELKAWIPLSGLP-VKKFFNTSGVVYKELKLSSKLPTMTEEEQIALLAT 91 (120)
T ss_dssp CCHHHHHHHHHHHTSC-GGGGBCTTSHHHHHTTHHHHGGGSCHHHHHHHHTT
T ss_pred CCHHHHHHHHHHcCCC-HHHeEeCCCchhhhcCcchhcccCCHHHHHHHHHh
Confidence 6788888999988875 6677766554444432 1234577887776643
No 77
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=52.23 E-value=3 Score=31.23 Aligned_cols=25 Identities=20% Similarity=0.426 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCcchHHHHhhhcCCc
Q 033691 6 KDVGLWLEEINLGGYRQIFKENGVN 30 (113)
Q Consensus 6 EDVa~WLeeiGLgqYre~Fk~N~Id 30 (113)
..+++|++.+..++|++.|.++++.
T Consensus 340 ~~~~~w~~~~~~~~~~~~~~~~~~~ 364 (373)
T 2qol_A 340 RTTGDWLNGVWTAHCKEIFTGVEYS 364 (373)
T ss_dssp -------------------------
T ss_pred CCHHHHHHhccchHHHHHHHhcCCC
Confidence 3568999999999999999998875
No 78
>3qk9_A Mitochondrial import inner membrane translocase S TIM44; mitochondrion, protein transport; 3.10A {Saccharomyces cerevisiae} PDB: 2fxt_A
Probab=51.29 E-value=5.5 Score=30.34 Aligned_cols=86 Identities=23% Similarity=0.345 Sum_probs=50.0
Q ss_pred chHHHHhhhcCCchhhhhccccc----chHHHHHHHHHhhhcch-------------------------hHHHHHHHH--
Q 033691 18 GGYRQIFKENGVNGEYLEGMSMF----TTEQILRFIRRCHMKWG-------------------------DFITLCKEL-- 66 (113)
Q Consensus 18 gqYre~Fk~N~IdG~~Li~Ltk~----t~e~ilr~i~r~~~k~G-------------------------d~itl~~El-- 66 (113)
.+=-+-|++|+-=|+.+..|-.- |+-|+++-+|.+-=+.| +|+.-|+|-
T Consensus 10 ~~~w~~fk~~~~~~~~~~~~k~~~~~es~np~i~~~r~itd~v~~~f~~te~a~~l~~Ik~~DPsF~~~~Fl~~a~~ai~ 89 (222)
T 3qk9_A 10 GKKVEDFKEKTVVGRSIQSLKNKLWDESENPLIVVMRKITNKVGGFFAETESSRVYSQFKLMDPTFSNESFTRHLREYIV 89 (222)
T ss_dssp -----------------CHHHHHHHHHCCCHHHHHHHHHCC---------CCHHHHTTCC-----CCHHHHHHHHHHTHH
T ss_pred HHHHHHHhhcCHHHHHHHHHHhhhcccccCHHHHHHHHHHHhcccccCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Confidence 34446799999999999888765 77788888888744433 577777774
Q ss_pred HHHHHHHhhCcccccCCCCCCcchhhHhHHHhhhccc
Q 033691 67 RRIKVACLKGEQKVRRPWWAPSCLSVVFVKVAKRNRQ 103 (113)
Q Consensus 67 ~~ikva~~~~~~~~~~~~w~p~~~s~v~~~~~~~~~~ 103 (113)
..|=-|..+|.-..-++|=.|..+++.-.-+..+..|
T Consensus 90 p~Il~Af~~GD~~~Lk~llse~~y~~f~~~i~~r~~~ 126 (222)
T 3qk9_A 90 PEILEAYVKGDVKVLKKWFSEAPFNVYAAQQKIFKEQ 126 (222)
T ss_dssp HHHHHHHHHTCHHHHHHHBCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCHHHHHhhcCHHHHHHHHHHHHHHHHC
Confidence 3588899999999999999998888655555555544
No 79
>2hl7_A Cytochrome C-type biogenesis protein CCMH; three-helices bundle, oxidoreductase; HET: PG4; 1.70A {Pseudomonas aeruginosa}
Probab=49.28 E-value=5.7 Score=26.68 Aligned_cols=20 Identities=20% Similarity=0.569 Sum_probs=16.2
Q ss_pred ccchHHHHHHHHHhhhcchhHHH
Q 033691 39 MFTTEQILRFIRRCHMKWGDFIT 61 (113)
Q Consensus 39 k~t~e~ilr~i~r~~~k~Gd~it 61 (113)
.-|+++|+.|+-- .|||||.
T Consensus 59 G~sd~eI~~~~v~---RYG~fVl 78 (84)
T 2hl7_A 59 GKSDGEIVDYMVA---RYGDFVR 78 (84)
T ss_dssp TCCHHHHHHHHHH---HHTTTCE
T ss_pred CCCHHHHHHHHHH---hcCCeee
Confidence 4578999999865 7999984
No 80
>2kw0_A CCMH protein; oxidoreductase, cytochrome C maturation; NMR {Escherichia coli}
Probab=47.38 E-value=6.3 Score=26.97 Aligned_cols=20 Identities=20% Similarity=0.607 Sum_probs=16.3
Q ss_pred ccchHHHHHHHHHhhhcchhHHH
Q 033691 39 MFTTEQILRFIRRCHMKWGDFIT 61 (113)
Q Consensus 39 k~t~e~ilr~i~r~~~k~Gd~it 61 (113)
.-|+++|+.|+-. .|||||.
T Consensus 56 G~Sd~eI~~~mv~---RYGdfVl 75 (90)
T 2kw0_A 56 GKSKKEIVDYMVA---RYGNFVT 75 (90)
T ss_dssp TCCHHHHHHHHHH---HHTTTCB
T ss_pred CCCHHHHHHHHHH---hcCCeEE
Confidence 4578999999875 7999985
No 81
>2gs0_B Cellular tumor antigen P53; TFIIH, TFB1, activation, transcription, PH domain; NMR {Homo sapiens}
Probab=33.39 E-value=16 Score=23.48 Aligned_cols=10 Identities=30% Similarity=0.720 Sum_probs=9.1
Q ss_pred CHHHHHHHHH
Q 033691 4 SIKDVGLWLE 13 (113)
Q Consensus 4 S~EDVa~WLe 13 (113)
+.|||+.||+
T Consensus 27 ~~eDv~~wl~ 36 (54)
T 2gs0_B 27 SPDDIEQWFT 36 (54)
T ss_pred CHHHHHHHhh
Confidence 6799999998
No 82
>3k8p_C DSL1, KLLA0C02695P; intracellular trafficking, DSL1 complex, multisubunit tethering complex, snare proteins; 2.60A {Kluyveromyces lactis}
Probab=29.41 E-value=58 Score=27.24 Aligned_cols=49 Identities=24% Similarity=0.370 Sum_probs=37.2
Q ss_pred cCcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHhhhcchhHHHHHHHHHHHHH
Q 033691 15 INLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRCHMKWGDFITLCKELRRIKV 71 (113)
Q Consensus 15 iGLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~~~k~Gd~itl~~El~~ikv 71 (113)
-.|.+-++.|.+ |+ |+-||++++...|+-+--.=--+=..+.|||.|+=
T Consensus 305 ssLkDI~~lW~e----Ge----L~~FstdEVv~LIrALFaDT~~Rr~aI~eIreiRn 353 (357)
T 3k8p_C 305 AHLKDILEMFYE----GE----FFLFETDEIVQWIILLFADTPTRRDCIDEIRRVRE 353 (357)
T ss_dssp CCHHHHHHHHHT----TG----GGGSCHHHHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHhc----CC----cceecHHHHHHHHHHHCcCCHHHHHHHHHHHHHHc
Confidence 355666666654 44 55999999999999987776777788888888763
No 83
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=29.09 E-value=1.1e+02 Score=19.59 Aligned_cols=49 Identities=14% Similarity=0.226 Sum_probs=29.1
Q ss_pred chHHHHhhh-----cCCchhhhhcc---cccchHHHHHHHHHh------hhcchhHHHHHHHH
Q 033691 18 GGYRQIFKE-----NGVNGEYLEGM---SMFTTEQILRFIRRC------HMKWGDFITLCKEL 66 (113)
Q Consensus 18 gqYre~Fk~-----N~IdG~~Li~L---tk~t~e~ilr~i~r~------~~k~Gd~itl~~El 66 (113)
..|+++|+. ..|++.+|..+ ++++.+++-+.+..+ .+.|.+|+.++..+
T Consensus 15 ~~~~~~F~~~D~~dG~Is~~el~~~l~~~gl~~~el~~i~~~~D~d~dG~id~~EF~~~m~~~ 77 (106)
T 1eh2_A 15 AKYDAIFDSLSPVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLV 77 (106)
T ss_dssp HHHHHHHTTSCCSSSCCBHHHHHHHHHTTTCCHHHHHHHHHHHCSSCSSBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCeEcHHHHHHHHHHcCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 457888864 33666666443 246666655555444 46677777776544
No 84
>2roh_A RTBP1, telomere binding protein-1; plant, nucleus, DNA binding protein; NMR {Oryza sativa}
Probab=29.07 E-value=56 Score=23.04 Aligned_cols=58 Identities=16% Similarity=0.263 Sum_probs=34.0
Q ss_pred CCCHHHHHHHH---HhcCcchHHHHhhhc--CCchh----------hh---------hcccccchHHHHHHHHHhhhcch
Q 033691 2 YLSIKDVGLWL---EEINLGGYRQIFKEN--GVNGE----------YL---------EGMSMFTTEQILRFIRRCHMKWG 57 (113)
Q Consensus 2 ~WS~EDVa~WL---eeiGLgqYre~Fk~N--~IdG~----------~L---------i~Ltk~t~e~ilr~i~r~~~k~G 57 (113)
.||.||+..=+ ++.|-+....+=+.. ...|| .+ +.-..++.|.+++-|...|.+||
T Consensus 33 ~WT~EEd~~L~~gV~k~G~g~W~~I~~~~~~~~~~RT~vdlKdRWrnllk~~~~~p~~kr~~~~p~e~~~~v~~~h~~~g 112 (122)
T 2roh_A 33 PFTVAEVELLVEAVEHLGTGRWRDVKFRAFENVHHRTYVDLKDKWKTLVHTASIAPQQRRGAPVPQELLDRVLAAQAYWS 112 (122)
T ss_dssp CCCHHHHHHHHHHHHHHSSSCHHHHHHHHHSSSCCCCHHHHHHHHHHHHHHHHSCTTTCCCSSCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCChHHHHHHhccccCCCCHHHHHHHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHh
Confidence 48988886544 445776666554431 11221 11 12356777777777778888888
Q ss_pred hH
Q 033691 58 DF 59 (113)
Q Consensus 58 d~ 59 (113)
..
T Consensus 113 ~~ 114 (122)
T 2roh_A 113 VD 114 (122)
T ss_dssp SS
T ss_pred hH
Confidence 53
No 85
>1n1j_A NF-YB; histone-like PAIR, DNA binding protein; 1.67A {Homo sapiens} SCOP: a.22.1.3
Probab=28.73 E-value=40 Score=21.69 Aligned_cols=22 Identities=14% Similarity=0.276 Sum_probs=18.2
Q ss_pred CHHHHHHHHHhcCcchHHHHhh
Q 033691 4 SIKDVGLWLEEINLGGYRQIFK 25 (113)
Q Consensus 4 S~EDVa~WLeeiGLgqYre~Fk 25 (113)
+.+||..=++++||.+|...=+
T Consensus 64 ~~~Dv~~Al~~l~F~~~i~~~~ 85 (93)
T 1n1j_A 64 NGEDILFAMSTLGFDSYVEPLK 85 (93)
T ss_dssp CHHHHHHHHHHTTCGGGHHHHH
T ss_pred CHHHHHHHHHHcCcHhhHHHHH
Confidence 5789999999999999976543
No 86
>3cxj_A Uncharacterized protein; PSI-II, structural genomics structure initiative; 2.80A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=28.09 E-value=23 Score=26.40 Aligned_cols=18 Identities=33% Similarity=0.457 Sum_probs=13.8
Q ss_pred CCCCHHHHHHHHHhcCcc
Q 033691 1 MYLSIKDVGLWLEEINLG 18 (113)
Q Consensus 1 ~~WS~EDVa~WLeeiGLg 18 (113)
|.-|.++|.+||.++|+-
T Consensus 1 ~~~~~~~I~~WL~eeG~~ 18 (165)
T 3cxj_A 1 MSLSQEMIKKWLDEEGFL 18 (165)
T ss_dssp --CHHHHHHHHHHHTTCE
T ss_pred CCccHHHHHHHHHHcCce
Confidence 345678999999999984
No 87
>2yqk_A Arginine-glutamic acid dipeptide repeats protein; structure genomics, SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.23 E-value=33 Score=20.93 Aligned_cols=39 Identities=15% Similarity=0.271 Sum_probs=22.4
Q ss_pred CCCHHHHHHHHHhcCcchHHHHhhhcCCchhhhhc--ccccchHHHHHHH
Q 033691 2 YLSIKDVGLWLEEINLGGYRQIFKENGVNGEYLEG--MSMFTTEQILRFI 49 (113)
Q Consensus 2 ~WS~EDVa~WLeeiGLgqYre~Fk~N~IdG~~Li~--Ltk~t~e~ilr~i 49 (113)
.||+||...+.+ ||..|-.-| ..+-. |..=|..||.+|-
T Consensus 11 ~WT~eE~~~Fe~--~l~~yGKdf-------~~I~~~~v~~Kt~~~~v~fY 51 (63)
T 2yqk_A 11 CWTEDEVKRFVK--GLRQYGKNF-------FRIRKELLPNKETGELITFY 51 (63)
T ss_dssp SCCHHHHHHHHH--HHHHTCSCH-------HHHHHHSCTTSCHHHHHHHH
T ss_pred CcCHHHHHHHHH--HHHHhCccH-------HHHHHHHcCCCcHHHHHHHH
Confidence 589999888766 455554434 22221 3445666666653
No 88
>2lz1_A Nuclear factor erythroid 2-related factor 2; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=27.04 E-value=32 Score=23.95 Aligned_cols=19 Identities=32% Similarity=0.450 Sum_probs=13.9
Q ss_pred hhhcccccchHHH--HHHHHH
Q 033691 33 YLEGMSMFTTEQI--LRFIRR 51 (113)
Q Consensus 33 ~Li~Ltk~t~e~i--lr~i~r 51 (113)
.|+..-.+|.+|+ +++|||
T Consensus 50 ~lL~~~~Lt~~Ql~lIrdiRR 70 (90)
T 2lz1_A 50 EMMSKEQFNEAQLALIRDIRR 70 (90)
T ss_dssp HHHHHSCCCHHHHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHHH
Confidence 4556667788887 788877
No 89
>4e9m_A Nucleotide-binding oligomerization domain-contain protein 1; innate immunity, RIPK2, protein binding; HET: FLC; 2.15A {Homo sapiens} PDB: 2b1w_A 2dbd_A
Probab=27.00 E-value=22 Score=26.45 Aligned_cols=35 Identities=20% Similarity=0.382 Sum_probs=10.0
Q ss_pred HHHHHHHhcCcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHh
Q 033691 7 DVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRC 52 (113)
Q Consensus 7 DVa~WLeeiGLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~ 52 (113)
|..-||+||||.-- ....++.-..|||+-||-..+
T Consensus 105 dl~pwl~ei~~~p~-----------~~~~~~~v~ntdpvsry~~kl 139 (144)
T 4e9m_A 105 DLRPWLLEIGFSPS-----------LLTQSKVVVNTDPVSRYTQQL 139 (144)
T ss_dssp GGHHHHHHTTCC----------------------------------
T ss_pred chhHHHHHhCCCcH-----------HHhcccceecCCchHHHHHHH
Confidence 56679999998643 233456667799998887654
No 90
>2p2u_A HOST-nuclease inhibitor protein GAM, putative; structural genomics, unknown function, PSI-2, protein structure initiative; 2.75A {Desulfovibrio vulgaris} SCOP: h.4.18.1
Probab=26.45 E-value=35 Score=24.60 Aligned_cols=32 Identities=19% Similarity=0.218 Sum_probs=22.6
Q ss_pred CCHHHHHHHHHhcCcchHHHHhhhcCCchhhhhc
Q 033691 3 LSIKDVGLWLEEINLGGYRQIFKENGVNGEYLEG 36 (113)
Q Consensus 3 WS~EDVa~WLeeiGLgqYre~Fk~N~IdG~~Li~ 36 (113)
|+.+.|-+||++.||.+|-.. .-.||=..|..
T Consensus 107 ~~~~~vle~Lk~~gl~~~Ir~--keevnK~al~~ 138 (171)
T 2p2u_A 107 ITKDMTLERLRQFGISEGIRI--KEDVNKEAMQG 138 (171)
T ss_dssp CCHHHHHHHHHHTTCCTTCCC--CCCCCHHHHTT
T ss_pred CCHHHHHHHHHHCCcHhheee--ccccCHHHHhc
Confidence 788999999999999876442 23455555544
No 91
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=26.35 E-value=90 Score=20.04 Aligned_cols=12 Identities=0% Similarity=0.210 Sum_probs=7.2
Q ss_pred cchHHHHHHHHH
Q 033691 40 FTTEQILRFIRR 51 (113)
Q Consensus 40 ~t~e~ilr~i~r 51 (113)
+|++++++.+..
T Consensus 73 ~~~~~~~~~l~~ 84 (114)
T 1rw1_A 73 LDEAKAIELMLA 84 (114)
T ss_dssp CCHHHHHHHHHH
T ss_pred CCHHHHHHHHHh
Confidence 466666665544
No 92
>1x6m_A GFA, glutathione-dependent formaldehyde-activating ENZ; Zn-enzyme, 3_10 helix, lyase; 2.35A {Paracoccus denitrificans} SCOP: b.88.1.4 PDB: 1xa8_A*
Probab=25.96 E-value=23 Score=25.61 Aligned_cols=19 Identities=21% Similarity=0.450 Sum_probs=16.0
Q ss_pred HHHHHHHHHhcCcchHHHH
Q 033691 5 IKDVGLWLEEINLGGYRQI 23 (113)
Q Consensus 5 ~EDVa~WLeeiGLgqYre~ 23 (113)
.++|..|+++.|+++|...
T Consensus 157 ~~~i~~w~~~~~l~~y~~~ 175 (196)
T 1x6m_A 157 MEAIRARLRELGLEPYDAL 175 (196)
T ss_dssp HHHHHHHHHHHTCEECSSS
T ss_pred cchhhhhhccCCCcccCCC
Confidence 4788899999999998653
No 93
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=25.33 E-value=1.5e+02 Score=19.40 Aligned_cols=14 Identities=7% Similarity=0.180 Sum_probs=9.1
Q ss_pred CHHHHHHHHHhcCc
Q 033691 4 SIKDVGLWLEEINL 17 (113)
Q Consensus 4 S~EDVa~WLeeiGL 17 (113)
|.+|+...|..+|+
T Consensus 50 ~~~el~~~l~~lg~ 63 (198)
T 1juo_A 50 DADELQRCLTQSGI 63 (198)
T ss_dssp CHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHhcc
Confidence 45667777777665
No 94
>2igp_A Retinoblastoma-associated protein HEC; calponin homology (CH) domain, alpha helices, cell cycle; 1.80A {Homo sapiens}
Probab=25.26 E-value=84 Score=21.58 Aligned_cols=40 Identities=20% Similarity=0.216 Sum_probs=26.5
Q ss_pred HHHHHHHHHhcCcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHh
Q 033691 5 IKDVGLWLEEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRC 52 (113)
Q Consensus 5 ~EDVa~WLeeiGLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~ 52 (113)
..++.++|.+.|+++ .|....|-+.|.=.---|.+||-++
T Consensus 20 ~~~i~~fL~~~~~~~--------~is~k~L~~Pt~kdF~~if~fL~~~ 59 (120)
T 2igp_A 20 IRQLCEFLTENGYAH--------NVSMKSLQAPSVKDFLKIFTFLYGF 59 (120)
T ss_dssp HHHHHHHHHHTTCSS--------CCCTTTTSSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCC--------CCCccccCCCCHHHHHHHHHHHHHh
Confidence 357888899888863 3666666666554445557777665
No 95
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae}
Probab=24.76 E-value=37 Score=24.98 Aligned_cols=19 Identities=11% Similarity=0.221 Sum_probs=16.1
Q ss_pred CCCCHHHHHHHHHhcCcch
Q 033691 1 MYLSIKDVGLWLEEINLGG 19 (113)
Q Consensus 1 ~~WS~EDVa~WLeeiGLgq 19 (113)
.+||.+||-+.+.+.|++-
T Consensus 188 ~~wt~~dV~~Yi~~~~lp~ 206 (261)
T 2oq2_A 188 INWTFEQVKQYIDANNVPY 206 (261)
T ss_dssp TTCCHHHHHHHHHHHTCCC
T ss_pred HhCCHHHHHHHHHHcCCCC
Confidence 4799999999999988863
No 96
>2goy_A Adenosine phosphosulfate reductase; iron sulfur cluster, nucleotide binding, thiosulfonate intermediate, oxidoreductase; HET: ADX; 2.70A {Pseudomonas aeruginosa}
Probab=24.61 E-value=42 Score=24.89 Aligned_cols=19 Identities=11% Similarity=0.099 Sum_probs=16.3
Q ss_pred CCCCHHHHHHHHHhcCcch
Q 033691 1 MYLSIKDVGLWLEEINLGG 19 (113)
Q Consensus 1 ~~WS~EDVa~WLeeiGLgq 19 (113)
.+||.+||-+++.+.|++-
T Consensus 197 ~~wt~~dV~~Yi~~~~lp~ 215 (275)
T 2goy_A 197 SSMTSEEVWGYIRMLELPY 215 (275)
T ss_dssp TTCCHHHHHHHHHHTTCCC
T ss_pred HhCCHHHHHHHHHHhCCCC
Confidence 3799999999999999873
No 97
>1jog_A Hypothetical protein HI0074; structural genomics, structure 2 function project, S2F, unknown function; 2.40A {Haemophilus influenzae} SCOP: a.24.16.2
Probab=24.59 E-value=72 Score=22.14 Aligned_cols=58 Identities=12% Similarity=0.040 Sum_probs=32.8
Q ss_pred HHHHHHhcCcch-----------HHHHhhhcCC-chhhhhccccc------c-----hHHHHHHHHHhhhcchhHHHHHH
Q 033691 8 VGLWLEEINLGG-----------YRQIFKENGV-NGEYLEGMSMF------T-----TEQILRFIRRCHMKWGDFITLCK 64 (113)
Q Consensus 8 Va~WLeeiGLgq-----------Yre~Fk~N~I-dG~~Li~Ltk~------t-----~e~ilr~i~r~~~k~Gd~itl~~ 64 (113)
...+|+..|++. ++.+|+.+-| +++.+..|.++ | .+.|.+-|.. -..||-.|++
T Consensus 61 ~k~~L~~~g~~~~~~~~~s~rd~~r~a~~~GlI~d~~~w~~m~~~RN~tvH~Y~e~~a~~v~~~I~~---~l~~f~~l~~ 137 (146)
T 1jog_A 61 MKRQLQQDAINTDDIGAYGFKDILREALRFGLIGDMSKWVAYRDMRNITSHTYDQEKAMAVYAQIDD---FLIESSFLLE 137 (146)
T ss_dssp HHHHHHHHTCSCCCTTSCCHHHHHHHHHHTTSCSCHHHHHHHHHHHTTGGGTTSHHHHHHHHHTHHH---HHHHHHHHHH
T ss_pred HHHHHHHcCCCccccCCCCHHHHHHHHHHcCCCCcHHHHHHHHHHhhHhcccccHhhHHHHHHHHHH---HHHHHHHHHH
Confidence 346788888765 6667777888 55455544332 2 2223333332 3566666666
Q ss_pred HHHH
Q 033691 65 ELRR 68 (113)
Q Consensus 65 El~~ 68 (113)
.|..
T Consensus 138 ~l~~ 141 (146)
T 1jog_A 138 QLRQ 141 (146)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 6653
No 98
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Probab=24.28 E-value=1e+02 Score=18.88 Aligned_cols=58 Identities=10% Similarity=0.072 Sum_probs=31.4
Q ss_pred chHHHHhh-----hcCCchhhhhccc----------ccchHHHHHHHHHh------hhcchhHHHHHHHHHHHHHHHhh
Q 033691 18 GGYRQIFK-----ENGVNGEYLEGMS----------MFTTEQILRFIRRC------HMKWGDFITLCKELRRIKVACLK 75 (113)
Q Consensus 18 gqYre~Fk-----~N~IdG~~Li~Lt----------k~t~e~ilr~i~r~------~~k~Gd~itl~~El~~ikva~~~ 75 (113)
.+++++|+ ++.|+-.+|..+- ..|.+.+-+.|+.+ .+.|-+|+.++..+....-..+.
T Consensus 9 ~~l~~~F~~fD~~dg~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~~~~~~~~~~~ 87 (96)
T 1a4p_A 9 ETMMFTFHKFAGDKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLTIACNDYFV 87 (96)
T ss_dssp HHHHHHHHHHHGGGCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCeECHHHHHHHHHHHcccccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHHHHHH
Confidence 34555554 2335555555432 23555555555554 36777888887765544333343
No 99
>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=23.71 E-value=40 Score=24.60 Aligned_cols=18 Identities=11% Similarity=0.169 Sum_probs=15.8
Q ss_pred CCCCHHHHHHHHHhcCcc
Q 033691 1 MYLSIKDVGLWLEEINLG 18 (113)
Q Consensus 1 ~~WS~EDVa~WLeeiGLg 18 (113)
.+||.+||-+++.+.|++
T Consensus 183 ~~wt~~dV~~y~~~~~lp 200 (252)
T 2o8v_A 183 IDWDNRTIYQYLQKHGLK 200 (252)
T ss_dssp GSCCHHHHHHHHHHTTCC
T ss_pred hhCCHHHHHHHHHHcCCC
Confidence 379999999999999986
No 100
>1j9i_A GPNU1 DBD;, terminase small subunit; DNA binding domain, homodimer, viral assembly, winged helix-turn-helix, viral protein; NMR {Enterobacteria phage lambda} SCOP: a.6.1.5
Probab=23.36 E-value=33 Score=20.24 Aligned_cols=16 Identities=19% Similarity=0.219 Sum_probs=11.7
Q ss_pred CCHHHHHHHHHhcCcc
Q 033691 3 LSIKDVGLWLEEINLG 18 (113)
Q Consensus 3 WS~EDVa~WLeeiGLg 18 (113)
|..+||.+||++-.-.
T Consensus 41 y~~~dv~~wl~~~~~~ 56 (68)
T 1j9i_A 41 YDSAAVIKWYAERDAE 56 (68)
T ss_dssp EEHHHHHHHHTTTGGG
T ss_pred ECHHHHHHHHHHCccc
Confidence 6778888998765433
No 101
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=22.79 E-value=87 Score=20.30 Aligned_cols=12 Identities=0% Similarity=0.002 Sum_probs=6.6
Q ss_pred cchHHHHHHHHH
Q 033691 40 FTTEQILRFIRR 51 (113)
Q Consensus 40 ~t~e~ilr~i~r 51 (113)
+|++++++.+-.
T Consensus 78 ~~~~~~~~~l~~ 89 (120)
T 2kok_A 78 VDAASARELMLA 89 (120)
T ss_dssp CCHHHHHHHHHH
T ss_pred CCHHHHHHHHHh
Confidence 456666655543
No 102
>1dtc_A Acetyl-delta-toxin; NMR {Staphylococcus aureus} SCOP: j.7.1.1 PDB: 2dtb_A 2kam_A*
Probab=22.69 E-value=34 Score=19.19 Aligned_cols=13 Identities=15% Similarity=0.281 Sum_probs=10.0
Q ss_pred hcchhHHHHHHHH
Q 033691 54 MKWGDFITLCKEL 66 (113)
Q Consensus 54 ~k~Gd~itl~~El 66 (113)
-.+||||+++-|-
T Consensus 7 sTIgdfvKlI~~T 19 (26)
T 1dtc_A 7 STIGDLVKWIIDT 19 (26)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4579999998763
No 103
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=22.12 E-value=72 Score=18.46 Aligned_cols=18 Identities=11% Similarity=0.139 Sum_probs=14.9
Q ss_pred hhcchhHHHHHHHHHHHH
Q 033691 53 HMKWGDFITLCKELRRIK 70 (113)
Q Consensus 53 ~~k~Gd~itl~~El~~ik 70 (113)
.+.||+++.+++.+++..
T Consensus 55 ~~~y~~vv~vmd~l~~aG 72 (74)
T 2jwk_A 55 EVPYEEVIKALNLLHLAG 72 (74)
T ss_dssp TSCHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHcC
Confidence 568999999999998743
No 104
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=21.71 E-value=62 Score=20.54 Aligned_cols=54 Identities=15% Similarity=0.359 Sum_probs=33.9
Q ss_pred chHHHHhhhcCC------chhhhhcc---cccchHHHHHHHHHh------hhcchhHHHHHHHHHHHHH
Q 033691 18 GGYRQIFKENGV------NGEYLEGM---SMFTTEQILRFIRRC------HMKWGDFITLCKELRRIKV 71 (113)
Q Consensus 18 gqYre~Fk~N~I------dG~~Li~L---tk~t~e~ilr~i~r~------~~k~Gd~itl~~El~~ikv 71 (113)
...+.+|+.=.. +-.++..+ ..+|.+++-+.+..+ .+.+-+|+.++..+...||
T Consensus 123 ~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~~~~ 191 (191)
T 3khe_A 123 ERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQKICDVKV 191 (191)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHTTSSCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHCCCCcCcCCHHHHHHHHccCCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccCC
Confidence 345666765443 34444444 246677776666665 4778888888888776554
No 105
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=21.70 E-value=92 Score=19.69 Aligned_cols=50 Identities=18% Similarity=0.290 Sum_probs=29.6
Q ss_pred chHHHHhhhcC------Cchhhhhcc---cccchHHHHHHHHHh------hhcchhHHHHHHHHH
Q 033691 18 GGYRQIFKENG------VNGEYLEGM---SMFTTEQILRFIRRC------HMKWGDFITLCKELR 67 (113)
Q Consensus 18 gqYre~Fk~N~------IdG~~Li~L---tk~t~e~ilr~i~r~------~~k~Gd~itl~~El~ 67 (113)
..|+++|..=. |+..+|..+ .+++.+++-+.+..+ .+.|-+|+.++..++
T Consensus 14 ~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~~~~ 78 (111)
T 2kgr_A 14 LKYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLID 78 (111)
T ss_dssp HHHHHHHHTTSCSSCCEEEHHHHHHHHHTTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHhCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHH
Confidence 45777776422 555555543 245666666656554 366778888776544
No 106
>3omd_A Uncharacterized protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, unknown function; HET: MSE; 1.50A {Leptospirillum rubarum}
Probab=21.58 E-value=69 Score=23.31 Aligned_cols=32 Identities=16% Similarity=0.247 Sum_probs=27.2
Q ss_pred HHHhhhcCCchhhhhcc--cccchHHHHHHHHHh
Q 033691 21 RQIFKENGVNGEYLEGM--SMFTTEQILRFIRRC 52 (113)
Q Consensus 21 re~Fk~N~IdG~~Li~L--tk~t~e~ilr~i~r~ 52 (113)
+.+|.-.+|+-.++..+ +.-|+++|+.+++..
T Consensus 52 ~~~l~flgI~~~~~~~~V~~~~sD~eil~wv~~~ 85 (145)
T 3omd_A 52 QAFFSFFGLDHEKFAEAVKSRPQDQDMLAWVHSQ 85 (145)
T ss_dssp HHHHHHHTCCHHHHHHHHTTCCSHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 45778889999998877 778999999999885
No 107
>3ezq_A Tumor necrosis factor receptor superfamily member; apoptosis, DISC, FAS, membrane,receptor, transmembrane; 2.73A {Homo sapiens} SCOP: a.77.1.2 PDB: 1ddf_A
Probab=21.33 E-value=2e+02 Score=19.98 Aligned_cols=63 Identities=24% Similarity=0.395 Sum_probs=46.2
Q ss_pred HHHhcCcchHHHHhhhcCCchhhhhccc----ccchHHHHHHHHHhhhcch---hHHHHHHHHHHHHHHH
Q 033691 11 WLEEINLGGYRQIFKENGVNGEYLEGMS----MFTTEQILRFIRRCHMKWG---DFITLCKELRRIKVAC 73 (113)
Q Consensus 11 WLeeiGLgqYre~Fk~N~IdG~~Li~Lt----k~t~e~ilr~i~r~~~k~G---d~itl~~El~~ikva~ 73 (113)
-.++.++.+.+++-+.+++.-..+.... .=+.||...-++..+++-| ..=+|++-||.++...
T Consensus 14 Iae~m~~~~wK~laR~LGlse~~Id~I~~d~~~d~~Eq~~qlLr~W~~~~G~~aa~~~Li~aLr~~~l~~ 83 (115)
T 3ezq_A 14 IAGVMTLSQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQLLRNWHQLHGKKEAYDTLIKDLKKANLCT 83 (115)
T ss_dssp HHHTSCHHHHHHHHHHTTCCHHHHHHHHHHCSSCHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCHHHHHHHHHHcCCCHhhHHHHHHcCCCChHHHHHHHHHHHHHHhCcccHHHHHHHHHHHccchh
Confidence 3466788888888777776666665443 2245999999999988875 5578999999887543
No 108
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=20.66 E-value=1e+02 Score=21.02 Aligned_cols=21 Identities=14% Similarity=0.253 Sum_probs=14.6
Q ss_pred CHHHHHHHHHhc-Ccc--hHHHHh
Q 033691 4 SIKDVGLWLEEI-NLG--GYRQIF 24 (113)
Q Consensus 4 S~EDVa~WLeei-GLg--qYre~F 24 (113)
+.+++.++.++. |+. .+.+++
T Consensus 108 ~~~~l~~~a~~~~Gld~~~~~~~~ 131 (193)
T 3hz8_A 108 NPEVLKKWLGEQTAFDGKKVLAAY 131 (193)
T ss_dssp SHHHHHHHHHHCTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHccCCCHHHHHHHH
Confidence 567788888888 884 344443
No 109
>2k9x_A Tburm1, uncharacterized protein; unknown function; NMR {Trypanosoma brucei}
Probab=20.58 E-value=34 Score=23.17 Aligned_cols=39 Identities=10% Similarity=0.044 Sum_probs=27.2
Q ss_pred CCHHHHHHHHHhcCcchHHHHhhhcC-----------Cchhhhhcccccc
Q 033691 3 LSIKDVGLWLEEINLGGYRQIFKENG-----------VNGEYLEGMSMFT 41 (113)
Q Consensus 3 WS~EDVa~WLeeiGLgqYre~Fk~N~-----------IdG~~Li~Ltk~t 41 (113)
||+.|+-+||.+.=.+...+.|-+++ |||+....|....
T Consensus 35 ~TV~dLl~~L~~~~~~~r~~lf~~~g~~~lrpgIlVLVNg~d~e~l~gld 84 (110)
T 2k9x_A 35 TNLNGLVQLLKTNYVKERPDLLVDQTGQTLRPGILVLVNSCDAEVVGGMD 84 (110)
T ss_dssp CCHHHHHHHHTTTTCCSCHHHHBCSSSSSBCTTEEEEESSSBHHHHTSSC
T ss_pred ccHHHHHHHHHHHccccchhhEecCCCcccCCCeEEEECCeeeeccCCcc
Confidence 78999999999874444889995543 5666655554443
No 110
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=20.40 E-value=1.3e+02 Score=17.08 Aligned_cols=12 Identities=8% Similarity=0.528 Sum_probs=6.4
Q ss_pred hcchhHHHHHHH
Q 033691 54 MKWGDFITLCKE 65 (113)
Q Consensus 54 ~k~Gd~itl~~E 65 (113)
+.|-+|+.++..
T Consensus 62 i~~~eF~~~~~~ 73 (92)
T 2kn2_A 62 VNYEEFVKMMMT 73 (92)
T ss_dssp EEHHHHHHHHHH
T ss_pred EeHHHHHHHHHh
Confidence 455555555543
No 111
>1wmg_A Netrin receptor UNC5H2; six helix bundle, death domain, apoptosis, structural genomi NPPSFA; 2.10A {Mus musculus} SCOP: a.77.1.2
Probab=20.36 E-value=1.7e+02 Score=19.17 Aligned_cols=52 Identities=12% Similarity=0.180 Sum_probs=38.2
Q ss_pred HhcCcchHHHHhhhcCCchhhhhcccccchHHHHHHHHHh---hhcchhHHHHHHHHHHHHHHHhh
Q 033691 13 EEINLGGYRQIFKENGVNGEYLEGMSMFTTEQILRFIRRC---HMKWGDFITLCKELRRIKVACLK 75 (113)
Q Consensus 13 eeiGLgqYre~Fk~N~IdG~~Li~Ltk~t~e~ilr~i~r~---~~k~Gd~itl~~El~~ikva~~~ 75 (113)
+++||..+...|+.. .-.|+.+|++...- ....++-+.++.|+.+--++...
T Consensus 39 ~~Lg~~~~i~~~~~~-----------~SPt~~LL~~W~~~~~~~~tv~~L~~~L~~mgR~Da~~~L 93 (103)
T 1wmg_A 39 QKLSMDRYLNYFATK-----------ASPTGVILDLWEARQQDDGDLNSLASALEEMGKSEMLVAM 93 (103)
T ss_dssp HHTTCGGGHHHHHTS-----------SCHHHHHHHHHHHHCCSTTTHHHHHHHHHHTTCHHHHHHH
T ss_pred HHcCChHHHHHHHcC-----------CCHHHHHHHHHHHhcCCCCcHHHHHHHHHHcCCHHHHHHH
Confidence 478999988888873 23467777765432 35788888888888888887766
No 112
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=20.02 E-value=53 Score=21.31 Aligned_cols=15 Identities=27% Similarity=0.483 Sum_probs=12.8
Q ss_pred cccchHHHHHHHHHh
Q 033691 38 SMFTTEQILRFIRRC 52 (113)
Q Consensus 38 tk~t~e~ilr~i~r~ 52 (113)
-++|.+++|.|||.-
T Consensus 8 ~~~~e~~lL~yIr~s 22 (59)
T 2xvc_A 8 HMITERELLDYIVNN 22 (59)
T ss_dssp CCCCHHHHHHHHHHT
T ss_pred hhccHHHHHHHHHHc
Confidence 468999999999973
Done!