BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 033692
         (113 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q02921|NO93_SOYBN Early nodulin-93 OS=Glycine max PE=2 SV=1
          Length = 105

 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/100 (52%), Positives = 67/100 (67%), Gaps = 7/100 (7%)

Query: 18  NSPL----IASPAEDLKAKAANDCVQEGVRAGLKAAAVMCVVTAVPTLVAVRKIPWAKAN 73
           NSPL    +AS   D K   A  C  EGV AG KAA V  V +A+PTL +VR +PWA+AN
Sbjct: 5   NSPLERPSLAS--LDQKLAFAKRCSHEGVLAGAKAAVVASVASAIPTLASVRMLPWARAN 62

Query: 74  LNYTGQALIISAVSIASYFITVDKTILECARRNAQYGKPT 113
           LN+T QALIIS  + A+YFI  DKT+L  AR+N+ + +P+
Sbjct: 63  LNHTAQALIISTATAAAYFIVADKTVLATARKNS-FNQPS 101


>sp|Q68Y62|CPT1A_HORSE Carnitine O-palmitoyltransferase 1, liver isoform OS=Equus caballus
           GN=CPT1A PE=2 SV=1
          Length = 776

 Score = 31.6 bits (70), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 3/41 (7%)

Query: 61  LVAVRKIPWAKANLNYTGQA---LIISAVSIASYFITVDKT 98
           L A  ++PWAK    Y G+      + AV  A++F+T+D+T
Sbjct: 383 LTAGERVPWAKCRQAYFGRGKNKQSLDAVEKAAFFVTLDET 423


>sp|P50416|CPT1A_HUMAN Carnitine O-palmitoyltransferase 1, liver isoform OS=Homo sapiens
           GN=CPT1A PE=1 SV=2
          Length = 773

 Score = 30.0 bits (66), Expect = 4.8,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 3/41 (7%)

Query: 61  LVAVRKIPWAKANLNYTGQA---LIISAVSIASYFITVDKT 98
           L A  ++PWA+    Y G+      + AV  A++F+T+D+T
Sbjct: 383 LTAGDRVPWARCRQAYFGRGKNKQSLDAVEKAAFFVTLDET 423


>sp|B2UN91|SYE_AKKM8 Glutamate--tRNA ligase OS=Akkermansia muciniphila (strain ATCC
           BAA-835) GN=gltX PE=3 SV=1
          Length = 433

 Score = 30.0 bits (66), Expect = 4.9,   Method: Composition-based stats.
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 9   DIFASRRSNNSPLIASPAEDLKAKAANDCVQEGV-RAGLKAAAVMCVVTAVPTLVAV 64
           DI   R  N   +IA PAE+   +A   C++ G+  + +  AA+  V T V TL  V
Sbjct: 274 DITKCRWVNQQHIIALPAEEFALRARPFCLKAGLPDSPILDAAIATVQTKVQTLAEV 330


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.130    0.373 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,515,549
Number of Sequences: 539616
Number of extensions: 1150015
Number of successful extensions: 3104
Number of sequences better than 100.0: 6
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3101
Number of HSP's gapped (non-prelim): 6
length of query: 113
length of database: 191,569,459
effective HSP length: 81
effective length of query: 32
effective length of database: 147,860,563
effective search space: 4731538016
effective search space used: 4731538016
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)