BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033696
(113 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255553313|ref|XP_002517699.1| prli-interacting factor l, putative [Ricinus communis]
gi|223543331|gb|EEF44863.1| prli-interacting factor l, putative [Ricinus communis]
Length = 426
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 72/116 (62%), Positives = 88/116 (75%), Gaps = 9/116 (7%)
Query: 1 MASSLSTEMATTFLSFTARPQNPFAKIRTTVLPVLFKPRARNLSYKTMPSSTHSEFIAFK 60
MASSLS ++ATTF SFT+R Q P ++IRT VLP+L KP+ ++LS +T P S HS I K
Sbjct: 1 MASSLSVDIATTFFSFTSRHQTPISRIRTAVLPLLLKPK-QSLSLRTTPFS-HSPRILSK 58
Query: 61 VPRPY---RRFTASASAAATTA---SEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
P + RRF+ SA++++TTA SEDSDL TKIPPDNRIPATIITGFLGSGK T
Sbjct: 59 -PNTFNLHRRFSVSAASSSTTAAPQSEDSDLTTKIPPDNRIPATIITGFLGSGKTT 113
>gi|359482402|ref|XP_003632769.1| PREDICTED: COBW domain-containing protein 2-like isoform 2 [Vitis
vinifera]
Length = 437
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 57/115 (49%), Positives = 80/115 (69%), Gaps = 14/115 (12%)
Query: 3 SSLSTEMATTFLSFTARPQNPFAKIRTTVLPVLFKPRA---RNLSYKTMPSSTHS----E 55
+++S ++ATTFL+F +RP ++RT+VLP+L++P+A +L++ + P +
Sbjct: 2 AAVSLDLATTFLTFASRP-----RVRTSVLPLLWRPKAYGSHSLNFHSFPVPSRRIVAVA 56
Query: 56 FIAFKVPRPYRRFTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
++ K R RRF SA AA TT SE SD+LTKIPPD+RIPATIITGFLGSGK T
Sbjct: 57 GVSSKPQRDRRRF--SAVAAQTTQSEGSDVLTKIPPDDRIPATIITGFLGSGKTT 109
>gi|359482400|ref|XP_002268800.2| PREDICTED: COBW domain-containing protein 2-like isoform 1 [Vitis
vinifera]
gi|297743555|emb|CBI36422.3| unnamed protein product [Vitis vinifera]
Length = 455
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 57/115 (49%), Positives = 80/115 (69%), Gaps = 14/115 (12%)
Query: 3 SSLSTEMATTFLSFTARPQNPFAKIRTTVLPVLFKPRA---RNLSYKTMPSSTHS----E 55
+++S ++ATTFL+F +RP ++RT+VLP+L++P+A +L++ + P +
Sbjct: 2 AAVSLDLATTFLTFASRP-----RVRTSVLPLLWRPKAYGSHSLNFHSFPVPSRRIVAVA 56
Query: 56 FIAFKVPRPYRRFTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
++ K R RRF SA AA TT SE SD+LTKIPPD+RIPATIITGFLGSGK T
Sbjct: 57 GVSSKPQRDRRRF--SAVAAQTTQSEGSDVLTKIPPDDRIPATIITGFLGSGKTT 109
>gi|359482404|ref|XP_003632770.1| PREDICTED: COBW domain-containing protein 2-like isoform 3 [Vitis
vinifera]
Length = 426
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 57/115 (49%), Positives = 80/115 (69%), Gaps = 14/115 (12%)
Query: 3 SSLSTEMATTFLSFTARPQNPFAKIRTTVLPVLFKPRA---RNLSYKTMPSSTHS----E 55
+++S ++ATTFL+F +RP ++RT+VLP+L++P+A +L++ + P +
Sbjct: 2 AAVSLDLATTFLTFASRP-----RVRTSVLPLLWRPKAYGSHSLNFHSFPVPSRRIVAVA 56
Query: 56 FIAFKVPRPYRRFTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
++ K R RRF SA AA TT SE SD+LTKIPPD+RIPATIITGFLGSGK T
Sbjct: 57 GVSSKPQRDRRRF--SAVAAQTTQSEGSDVLTKIPPDDRIPATIITGFLGSGKTT 109
>gi|147823223|emb|CAN68607.1| hypothetical protein VITISV_012922 [Vitis vinifera]
Length = 125
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 82/118 (69%), Gaps = 15/118 (12%)
Query: 3 SSLSTEMATTFLSFTARPQNPFAKIRTTVLPVLFKPRA---RNLSYKTMPSSTHSEF--- 56
+++S ++ATTFL+F +RP ++RT+VLP+L++P+A +L++ + P +
Sbjct: 2 AAVSLDLATTFLTFASRP-----RVRTSVLPLLWRPKAYGSHSLNFHSFPVPSRRIVAVA 56
Query: 57 -IAFKVPRPYRRFTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGK-NTGS 112
++ K R RRF SA AA TT SE SD+LTKIPPD+RIPATIITGFLGSGK N G+
Sbjct: 57 GVSSKPQRDRRRF--SAVAAQTTQSEGSDVLTKIPPDDRIPATIITGFLGSGKENLGA 112
>gi|15220146|ref|NP_178163.1| plastid transcriptionally active 17 protein [Arabidopsis thaliana]
gi|6730739|gb|AAF27129.1|AC018849_17 hypothetical protein; 58060-60358 [Arabidopsis thaliana]
gi|48958493|gb|AAT47799.1| At1g80480 [Arabidopsis thaliana]
gi|51536562|gb|AAU05519.1| At1g80480 [Arabidopsis thaliana]
gi|332198289|gb|AEE36410.1| plastid transcriptionally active 17 protein [Arabidopsis thaliana]
Length = 444
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 72/112 (64%), Gaps = 10/112 (8%)
Query: 1 MASSLSTEMATTFLSFTA-RPQNPFA-KIRTTVLPVLFKPRARNLSYKTMPSSTHSEFIA 58
MA+ + E+ATTFLSFTA R F + + + VL +PRA +S +T PS +S +
Sbjct: 1 MATLSTLEIATTFLSFTAPRSSAAFNYRFSSAAVSVLSRPRATTVSVRTTPSFFYSPVV- 59
Query: 59 FKVPRPYRRFTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
RR S+ +A+ T +EDSD+ TKIPPDNRIPATIITGFLGSGK T
Sbjct: 60 -------RRQRFSSVSASATQTEDSDVTTKIPPDNRIPATIITGFLGSGKTT 104
>gi|224128480|ref|XP_002329014.1| predicted protein [Populus trichocarpa]
gi|222839685|gb|EEE78008.1| predicted protein [Populus trichocarpa]
Length = 449
Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 50/106 (47%), Positives = 65/106 (61%), Gaps = 18/106 (16%)
Query: 9 MATTFLSFTARPQNPFAKIRTTVLPVLFKPRA--RNLSYKTMPSSTHSEFIAFKVPRPYR 66
MATTF+S T+ +P +R+T+LP L KP+ ++L KT PS R
Sbjct: 1 MATTFVSLTS--HHPTRILRSTLLPFLLKPQKTHQSLLLKTTPSLQR------------R 46
Query: 67 RFTASASAAATTA--SEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
RF+ S+ ++A ++DS L TKIPPDNRI ATIITGFLGSGK T
Sbjct: 47 RFSVSSIDTTSSAPQTDDSGLTTKIPPDNRISATIITGFLGSGKTT 92
>gi|356576845|ref|XP_003556540.1| PREDICTED: COBW domain-containing protein 1-like [Glycine max]
Length = 445
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 66/108 (61%), Gaps = 12/108 (11%)
Query: 4 SLSTEMATTFLSFTARPQNPFA-KIRTTVLPVLFKPRARNLSYKTMPSSTHSEFIAFKVP 62
+ + E+A +F R + PF ++TT+LP+L + + +HS+ + F +
Sbjct: 2 TFTAEVACSFFGLAYRNRKPFTLSLQTTLLPLL----------RRTTTHSHSQSLTFPL- 50
Query: 63 RPYRRFTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
RP RRF+ A+ A SEDSD+ T IPPDNRIPATIITGFLGSGK T
Sbjct: 51 RPSRRFSVPATTTAPPQSEDSDVSTLIPPDNRIPATIITGFLGSGKTT 98
>gi|356536502|ref|XP_003536776.1| PREDICTED: COBW domain-containing protein 2-like isoform 2 [Glycine
max]
Length = 437
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 67/108 (62%), Gaps = 14/108 (12%)
Query: 4 SLSTEMATTFLSFTARPQNPFA-KIRTTVLPVLFKPRARNLSYKTMPSSTHSEFIAFKVP 62
+ +TE+A++FL PF ++TT+LP+L + ++THS + F +
Sbjct: 5 TFTTEVASSFLGLAYHNPKPFTLSLQTTLLPLLRR------------TTTHSRSLTFPL- 51
Query: 63 RPYRRFTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
RP RRF +++ A SEDSD+ T IPPDNRIPATIITGFLGSGK T
Sbjct: 52 RPSRRFFVTSATTAPPQSEDSDVSTVIPPDNRIPATIITGFLGSGKTT 99
>gi|356536500|ref|XP_003536775.1| PREDICTED: COBW domain-containing protein 2-like isoform 1 [Glycine
max]
Length = 446
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 67/108 (62%), Gaps = 14/108 (12%)
Query: 4 SLSTEMATTFLSFTARPQNPFA-KIRTTVLPVLFKPRARNLSYKTMPSSTHSEFIAFKVP 62
+ +TE+A++FL PF ++TT+LP+L + ++THS + F +
Sbjct: 5 TFTTEVASSFLGLAYHNPKPFTLSLQTTLLPLLRR------------TTTHSRSLTFPL- 51
Query: 63 RPYRRFTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
RP RRF +++ A SEDSD+ T IPPDNRIPATIITGFLGSGK T
Sbjct: 52 RPSRRFFVTSATTAPPQSEDSDVSTVIPPDNRIPATIITGFLGSGKTT 99
>gi|297839889|ref|XP_002887826.1| PTAC17 [Arabidopsis lyrata subsp. lyrata]
gi|297333667|gb|EFH64085.1| PTAC17 [Arabidopsis lyrata subsp. lyrata]
Length = 437
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 49/113 (43%), Positives = 68/113 (60%), Gaps = 15/113 (13%)
Query: 1 MASSLSTEMATTFLSFTARPQNPFA---KIRTTVLPVLFKPRARNLSYKTMPSSTHSEFI 57
MA+ E+A+TFL+ P++ A + + + V +PRA +S +T PS +S +
Sbjct: 1 MATLSKLEIASTFLA----PRSAAAFNYRSSSAAVSVFSRPRATTVSVRTTPSLFYSPVV 56
Query: 58 AFKVPRPYRRFTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
RR S+ + + T +EDSD+ TKIPPDNRIPATIITGFLGSGK T
Sbjct: 57 --------RRRRFSSVSVSATQTEDSDVTTKIPPDNRIPATIITGFLGSGKTT 101
>gi|224134440|ref|XP_002327406.1| predicted protein [Populus trichocarpa]
gi|222835960|gb|EEE74381.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/46 (71%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
Query: 66 RRFTASASAAATTA-SEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
RRF+ SA+A + ++DSDL TKIPPDNRIPATIITGFLGSGK T
Sbjct: 2 RRFSVSATATTSAPQTDDSDLTTKIPPDNRIPATIITGFLGSGKTT 47
>gi|15218287|ref|NP_173025.1| Cobalamin biosynthesis CobW-like protein [Arabidopsis thaliana]
gi|8927652|gb|AAF82143.1|AC034256_7 Contains similarity to COBW-like protein from Homo sapiens
gb|AF257330 and contains a Viral (Superfamily 1) RNA
helicase PF|01443 domain. EST gb|AI997977 comes from
this genes [Arabidopsis thaliana]
gi|14194111|gb|AAK56250.1|AF367261_1 At1g15730/F7H2_7 [Arabidopsis thaliana]
gi|20334730|gb|AAM16226.1| At1g15730/F7H2_7 [Arabidopsis thaliana]
gi|23397243|gb|AAN31903.1| putative PRLI-interacting factor L [Arabidopsis thaliana]
gi|332191233|gb|AEE29354.1| Cobalamin biosynthesis CobW-like protein [Arabidopsis thaliana]
Length = 448
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/116 (40%), Positives = 60/116 (51%), Gaps = 15/116 (12%)
Query: 1 MASSLSTEMATTFLSFTARPQNP-----FAKIRTTVLPVLFKPRARNLSYKTMPSSTHSE 55
MA+ L ++ATTFL+F N FA R + V S +T SS +S
Sbjct: 1 MATLLKLDIATTFLAFIVPRANTSLNHRFASARLSTATV---------SLRTKSSSFYSA 51
Query: 56 FIAFKVPRPYRRFTASASAAATTASEDS-DLLTKIPPDNRIPATIITGFLGSGKNT 110
+ R + AS S+ A ED D+ ++I PDNRIPATIITGFLGSGK T
Sbjct: 52 ALYSDSRRRFHSAVASDSSLAVVDDEDIFDVASEILPDNRIPATIITGFLGSGKTT 107
>gi|357137477|ref|XP_003570327.1| PREDICTED: COBW domain-containing protein 2-like isoform 2
[Brachypodium distachyon]
Length = 422
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/48 (68%), Positives = 37/48 (77%), Gaps = 3/48 (6%)
Query: 63 RPYRRFTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
R RRF ASA A+T ED+D+ T IPPD+RIPATIITGFLGSGK T
Sbjct: 57 RAQRRFAASA---ASTTEEDADVDTMIPPDDRIPATIITGFLGSGKTT 101
>gi|357137475|ref|XP_003570326.1| PREDICTED: COBW domain-containing protein 2-like isoform 1
[Brachypodium distachyon]
Length = 440
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/48 (68%), Positives = 37/48 (77%), Gaps = 3/48 (6%)
Query: 63 RPYRRFTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
R RRF ASA A+T ED+D+ T IPPD+RIPATIITGFLGSGK T
Sbjct: 57 RAQRRFAASA---ASTTEEDADVDTMIPPDDRIPATIITGFLGSGKTT 101
>gi|297849990|ref|XP_002892876.1| hypothetical protein ARALYDRAFT_888963 [Arabidopsis lyrata subsp.
lyrata]
gi|297338718|gb|EFH69135.1| hypothetical protein ARALYDRAFT_888963 [Arabidopsis lyrata subsp.
lyrata]
Length = 446
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/116 (38%), Positives = 59/116 (50%), Gaps = 15/116 (12%)
Query: 1 MASSLSTEMATTFLSFTARPQNP-----FAKIRTTVLPVLFKPRARNLSYKTMPSSTHSE 55
MA+ ++ATTFL+F N FA R R +S +T PSS +
Sbjct: 1 MATQFRLDIATTFLAFNVPRANTSLNHRFASARL---------RRATVSLRTKPSSFYPA 51
Query: 56 FIAFKVPRPYRRFTASASAAATTASEDS-DLLTKIPPDNRIPATIITGFLGSGKNT 110
+ R + AS S+ A ++DS D+ T+ DNRIPATIITGFLGSGK T
Sbjct: 52 AVYSDSRRRFHSAVASDSSLAVMDTDDSFDVSTENLQDNRIPATIITGFLGSGKTT 107
>gi|449468948|ref|XP_004152183.1| PREDICTED: COBW domain-containing protein 2-like [Cucumis sativus]
gi|449513465|ref|XP_004164332.1| PREDICTED: COBW domain-containing protein 2-like [Cucumis sativus]
Length = 451
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 58 AFKVPRPYRRFTASASAAA-TTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
A + R RF+ AS A T+ S++S++LTKIPPDNRIPATIITGFLGSGK T
Sbjct: 51 ALQSKRTSPRFSVFASTATPTSESDESEVLTKIPPDNRIPATIITGFLGSGKTT 104
>gi|326492377|dbj|BAK01972.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 448
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/68 (48%), Positives = 43/68 (63%)
Query: 43 LSYKTMPSSTHSEFIAFKVPRPYRRFTASASAAATTASEDSDLLTKIPPDNRIPATIITG 102
L + P S ++ A +V +R A++AA+ E +D+ T IPPDNRIPATIITG
Sbjct: 33 LRLRAAPRSCYTAPRAGRVAPSWRAHRRFAASAASATEEGADVDTVIPPDNRIPATIITG 92
Query: 103 FLGSGKNT 110
FLGSGK T
Sbjct: 93 FLGSGKTT 100
>gi|148907039|gb|ABR16663.1| unknown [Picea sitchensis]
Length = 450
Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 66 RRFTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
+R T ++A T ++++++ P D RIPATI+TGFLGSGK T
Sbjct: 66 KRSTMVKASATTQGQSTAEVVSQFPADTRIPATILTGFLGSGKTT 110
>gi|51090705|dbj|BAD36713.1| PRLI-interacting factor L-like [Oryza sativa Japonica Group]
gi|215769352|dbj|BAH01581.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 447
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/22 (95%), Positives = 21/22 (95%)
Query: 89 IPPDNRIPATIITGFLGSGKNT 110
IPPDNRIPATIITGFLGSGK T
Sbjct: 84 IPPDNRIPATIITGFLGSGKTT 105
>gi|218191755|gb|EEC74182.1| hypothetical protein OsI_09310 [Oryza sativa Indica Group]
Length = 447
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/22 (95%), Positives = 21/22 (95%)
Query: 89 IPPDNRIPATIITGFLGSGKNT 110
IPPDNRIPATIITGFLGSGK T
Sbjct: 84 IPPDNRIPATIITGFLGSGKTT 105
>gi|413939343|gb|AFW73894.1| hypothetical protein ZEAMMB73_196871 [Zea mays]
Length = 720
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/28 (82%), Positives = 24/28 (85%)
Query: 83 SDLLTKIPPDNRIPATIITGFLGSGKNT 110
S + T IPPDNRIPATIITGFLGSGK T
Sbjct: 394 SGVETLIPPDNRIPATIITGFLGSGKTT 421
>gi|413939344|gb|AFW73895.1| hypothetical protein ZEAMMB73_196871 [Zea mays]
Length = 628
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/28 (82%), Positives = 24/28 (85%)
Query: 83 SDLLTKIPPDNRIPATIITGFLGSGKNT 110
S + T IPPDNRIPATIITGFLGSGK T
Sbjct: 394 SGVETLIPPDNRIPATIITGFLGSGKTT 421
>gi|413939342|gb|AFW73893.1| hypothetical protein ZEAMMB73_196871 [Zea mays]
Length = 764
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/28 (82%), Positives = 24/28 (85%)
Query: 83 SDLLTKIPPDNRIPATIITGFLGSGKNT 110
S + T IPPDNRIPATIITGFLGSGK T
Sbjct: 394 SGVETLIPPDNRIPATIITGFLGSGKTT 421
>gi|116785795|gb|ABK23863.1| unknown [Picea sitchensis]
Length = 255
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 65 YRRFTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKN 109
+R + A+ATT +E ++ L ++P D RIPATI+ G LGSGK+
Sbjct: 47 LKRGLTTVKASATTQAESNEALAQVPSDTRIPATILAGLLGSGKD 91
>gi|255557855|ref|XP_002519957.1| prli-interacting factor l, putative [Ricinus communis]
gi|223541003|gb|EEF42561.1| prli-interacting factor l, putative [Ricinus communis]
Length = 413
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 22/102 (21%)
Query: 9 MATTFLSFTARPQNPFAKIRTTVLPVLFKPRARNLSYKTMPSSTHSEFIAFKVPRPYRRF 68
MA +L P N F+++ ++NL SS S+FI+ + + R
Sbjct: 1 MAVRYLISRTSPNNLFSQL----------VHSKNLQ----KSSLLSQFISTR----FSRN 42
Query: 69 TASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
TA++++ T + ++ L + DNR+PAT+ITGFLGSGK T
Sbjct: 43 TATSTSDYTLEAAEAALGS----DNRVPATVITGFLGSGKTT 80
>gi|224138328|ref|XP_002326575.1| predicted protein [Populus trichocarpa]
gi|222833897|gb|EEE72374.1| predicted protein [Populus trichocarpa]
Length = 420
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 21/100 (21%)
Query: 13 FLSFTARPQNPFAKIRTTVLPVLFKPRARNLSYKTMPSSTHSEFIAFKVPRPYRRFTASA 72
FL P+N + ++ T L N SY P + HS F R+F +S
Sbjct: 6 FLVSRTSPKNLYQLLQNTSL---------NPSY--FPRNIHSLF--------SRQFHSSQ 46
Query: 73 SAAATTAS-EDSDLLTKIP-PDNRIPATIITGFLGSGKNT 110
+A +++S E P P+ R+PAT+ITGFLGSGK T
Sbjct: 47 TATFSSSSLEPQQTSASAPGPNTRVPATVITGFLGSGKTT 86
>gi|356559093|ref|XP_003547836.1| PREDICTED: COBW domain-containing protein 2-like [Glycine max]
Length = 424
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 62 PRPYRR--FTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
PR +R F+ + + + + D + DNR+PAT+ITGFLGSGK T
Sbjct: 46 PRKFRNSFFSGTFRGMVSAPNPNFDEAASLALDNRVPATVITGFLGSGKTT 96
>gi|111608966|gb|ABH11040.1| PRLI interacting factor L-like protein [Polytomella parva]
Length = 175
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 66 RRFTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
R + S S S DS+++ I D R+P T+ITGFLGSGK T
Sbjct: 33 RNMSISKSRKIVAKSLDSEVIPNIKTDTRLPVTVITGFLGSGKTT 77
>gi|113208414|gb|AAP45158.2| Dopamine-responsive protein, putative [Solanum bulbocastanum]
Length = 462
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 66 RRFTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
R F+ S A + DS + + D+R+PAT+ITGFLGSGK T
Sbjct: 55 RSFSTSPEYVAQDS--DSSIAAALSLDSRVPATVITGFLGSGKTT 97
>gi|109289906|gb|AAP45170.2| Dopamine-responsive protein, putative [Solanum bulbocastanum]
Length = 455
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 66 RRFTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
R F+ S A + DS + + D+R+PAT+ITGFLGSGK T
Sbjct: 55 RSFSTSPEYVAQDS--DSSIAAALSLDSRVPATVITGFLGSGKTT 97
>gi|302761836|ref|XP_002964340.1| hypothetical protein SELMODRAFT_405512 [Selaginella moellendorffii]
gi|300168069|gb|EFJ34673.1| hypothetical protein SELMODRAFT_405512 [Selaginella moellendorffii]
Length = 448
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 7/50 (14%)
Query: 66 RRFTASASAAATTASEDSDLLTKIPP-----DNRIPATIITGFLGSGKNT 110
R+ + A ATT E + T+IP DNR+P T+ITGFLG+GK T
Sbjct: 57 RKLSVRTLANATTQQETAP--TEIPESHVCVDNRVPITVITGFLGAGKTT 104
>gi|302768549|ref|XP_002967694.1| hypothetical protein SELMODRAFT_145106 [Selaginella moellendorffii]
gi|300164432|gb|EFJ31041.1| hypothetical protein SELMODRAFT_145106 [Selaginella moellendorffii]
Length = 472
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 7/50 (14%)
Query: 66 RRFTASASAAATTASEDSDLLTKIPP-----DNRIPATIITGFLGSGKNT 110
R+ + A ATT E + T+IP DNR+P T+ITGFLG+GK T
Sbjct: 64 RKLSVRTLANATTQQETAP--TEIPESHVCVDNRVPITVITGFLGAGKTT 111
>gi|119896746|ref|YP_931959.1| putative cobalmin snthesis protein [Azoarcus sp. BH72]
gi|119669159|emb|CAL93072.1| putative cobalmin snthesis protein [Azoarcus sp. BH72]
Length = 426
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 65 YRRFTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
YR +TA + T+ + +T PD RIP T++TGFLG+GK T
Sbjct: 40 YRSWTARPYHSLLTSPHHAVPMTPDTPDRRIPVTVLTGFLGAGKTT 85
>gi|424841357|ref|ZP_18265982.1| putative GTPase, G3E family [Saprospira grandis DSM 2844]
gi|395319555|gb|EJF52476.1| putative GTPase, G3E family [Saprospira grandis DSM 2844]
Length = 332
Score = 40.8 bits (94), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/19 (89%), Positives = 17/19 (89%)
Query: 92 DNRIPATIITGFLGSGKNT 110
DNRIP TIITGFLGSGK T
Sbjct: 2 DNRIPVTIITGFLGSGKTT 20
>gi|297804240|ref|XP_002870004.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315840|gb|EFH46263.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 414
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 68 FTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
F + S+ ++ E D+ + D RIPAT+ITGFLGSGK T
Sbjct: 42 FLKTFSSVPSSGIE-QDVAASLNQDTRIPATVITGFLGSGKTT 83
>gi|326529359|dbj|BAK01073.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 406
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 16/19 (84%), Positives = 18/19 (94%)
Query: 92 DNRIPATIITGFLGSGKNT 110
DNR+PAT+ITGFLGSGK T
Sbjct: 65 DNRVPATVITGFLGSGKTT 83
>gi|225427419|ref|XP_002264766.1| PREDICTED: COBW domain-containing protein 2 [Vitis vinifera]
gi|296088399|emb|CBI37390.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 16/19 (84%), Positives = 18/19 (94%)
Query: 92 DNRIPATIITGFLGSGKNT 110
DNR+PAT+ITGFLGSGK T
Sbjct: 71 DNRVPATVITGFLGSGKTT 89
>gi|147801242|emb|CAN70155.1| hypothetical protein VITISV_027697 [Vitis vinifera]
Length = 534
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 16/19 (84%), Positives = 18/19 (94%)
Query: 92 DNRIPATIITGFLGSGKNT 110
DNR+PAT+ITGFLGSGK T
Sbjct: 71 DNRVPATVITGFLGSGKTT 89
>gi|307104427|gb|EFN52681.1| hypothetical protein CHLNCDRAFT_138656 [Chlorella variabilis]
Length = 336
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 73 SAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
AAA S+ D+ K+ D+R+P T+ITGFLGSGK T
Sbjct: 14 CAAAVEESDAIDVEGKVL-DDRVPVTVITGFLGSGKTT 50
>gi|303272321|ref|XP_003055522.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463496|gb|EEH60774.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 446
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 51 STHSEFIAFKVPRPYRRFTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
++H + R R AS S AAT D R+P TI+TGFLGSGK T
Sbjct: 19 ASHPRHVRASASRIASRRPASISCAATAGDAVKD--------KRVPVTILTGFLGSGKTT 70
>gi|449456911|ref|XP_004146192.1| PREDICTED: COBW domain-containing protein 2-like [Cucumis sativus]
gi|449512950|ref|XP_004164186.1| PREDICTED: COBW domain-containing protein 2-like [Cucumis sativus]
Length = 424
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 41/103 (39%), Gaps = 11/103 (10%)
Query: 9 MATTFLSFTARPQNPFAK-IRTTVLPVLFKPRARNLSYKTMPSSTHSEFIAFKVPRPYRR 67
MATTFL P+ F + P RNL ST P R
Sbjct: 1 MATTFLIRRTSPRYLFQPPLHYFSSSSSSSPLLRNLCSLLFRDSTSCNR-PNSCPSYTRS 59
Query: 68 FTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
F + + + A + D R+PAT+ITGFLGSGK T
Sbjct: 60 FVSLPEGSGSPA---------LGSDTRVPATVITGFLGSGKTT 93
>gi|323457045|gb|EGB12911.1| hypothetical protein AURANDRAFT_52124 [Aureococcus anophagefferens]
Length = 400
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 21/25 (84%)
Query: 86 LTKIPPDNRIPATIITGFLGSGKNT 110
++ + P++RIP T++TGFLGSGK T
Sbjct: 1 MSAMKPESRIPVTVLTGFLGSGKTT 25
>gi|150864936|ref|XP_001383955.2| hypothetical protein PICST_44069 [Scheffersomyces stipitis CBS
6054]
gi|149386192|gb|ABN65926.2| hypothetical protein PICST_44069 [Scheffersomyces stipitis CBS
6054]
Length = 414
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 4/40 (10%)
Query: 71 SASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
S S++ T A ++D TK +IP TIITG+LGSGK+T
Sbjct: 23 SISSSTTAADSENDAETK----RKIPITIITGYLGSGKST 58
>gi|388581486|gb|EIM21794.1| cobW-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 368
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 82 DSDLLTKIPPDNRIPATIITGFLGSGKNT 110
DS+ IP D ++P TI+TG+LG+GK+T
Sbjct: 14 DSNETVDIPDDKKVPLTILTGYLGAGKST 42
>gi|424922697|ref|ZP_18346058.1| GTPase [Pseudomonas fluorescens R124]
gi|404303857|gb|EJZ57819.1| GTPase [Pseudomonas fluorescens R124]
Length = 346
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 14/21 (66%), Positives = 18/21 (85%)
Query: 90 PPDNRIPATIITGFLGSGKNT 110
PP+ +IP TI+TGFLG+GK T
Sbjct: 9 PPNTKIPVTILTGFLGAGKTT 29
>gi|115460306|ref|NP_001053753.1| Os04g0599700 [Oryza sativa Japonica Group]
gi|38345768|emb|CAE03469.2| OSJNBa0083N12.6 [Oryza sativa Japonica Group]
gi|113565324|dbj|BAF15667.1| Os04g0599700 [Oryza sativa Japonica Group]
gi|215694465|dbj|BAG89434.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195492|gb|EEC77919.1| hypothetical protein OsI_17249 [Oryza sativa Indica Group]
gi|222629477|gb|EEE61609.1| hypothetical protein OsJ_16026 [Oryza sativa Japonica Group]
Length = 411
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 15/19 (78%), Positives = 17/19 (89%)
Query: 92 DNRIPATIITGFLGSGKNT 110
D R+PAT+ITGFLGSGK T
Sbjct: 68 DTRVPATVITGFLGSGKTT 86
>gi|357165567|ref|XP_003580428.1| PREDICTED: COBW domain-containing protein 1-like [Brachypodium
distachyon]
Length = 410
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 15/19 (78%), Positives = 17/19 (89%)
Query: 92 DNRIPATIITGFLGSGKNT 110
D R+PAT+ITGFLGSGK T
Sbjct: 69 DTRVPATVITGFLGSGKTT 87
>gi|379729237|ref|YP_005321433.1| cobalamin synthesis protein CobW [Saprospira grandis str. Lewin]
gi|378574848|gb|AFC23849.1| cobalamin synthesis protein CobW [Saprospira grandis str. Lewin]
Length = 332
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/19 (84%), Positives = 16/19 (84%)
Query: 92 DNRIPATIITGFLGSGKNT 110
D RIP TIITGFLGSGK T
Sbjct: 2 DKRIPVTIITGFLGSGKTT 20
>gi|350634451|gb|EHA22813.1| hypothetical protein ASPNIDRAFT_175519 [Aspergillus niger ATCC
1015]
Length = 376
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 73 SAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
S A+ A + L T PP NR+P T++TG+LG+GK T
Sbjct: 14 STASDVAPPSTSLDT--PPQNRVPITLVTGYLGAGKTT 49
>gi|440802250|gb|ELR23180.1| cobalamin synthesis protein/P47K [Acanthamoeba castellanii str.
Neff]
Length = 480
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 16/21 (76%), Positives = 16/21 (76%)
Query: 90 PPDNRIPATIITGFLGSGKNT 110
P D RIP IITGFLGSGK T
Sbjct: 137 PKDKRIPVGIITGFLGSGKTT 157
>gi|332530853|ref|ZP_08406778.1| cobalamin biosynthesis protein CobW [Hylemonella gracilis ATCC
19624]
gi|332039650|gb|EGI76051.1| cobalamin biosynthesis protein CobW [Hylemonella gracilis ATCC
19624]
Length = 353
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 15/20 (75%), Positives = 17/20 (85%)
Query: 91 PDNRIPATIITGFLGSGKNT 110
P +IPATI+TGFLGSGK T
Sbjct: 2 PSRKIPATIVTGFLGSGKTT 21
>gi|358365687|dbj|GAA82309.1| CobW domain protein [Aspergillus kawachii IFO 4308]
Length = 430
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 73 SAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
S A A + L T PP NR+P T++TG+LG+GK T
Sbjct: 14 STAPDVAPPSTSLDT--PPQNRVPITLVTGYLGAGKTT 49
>gi|218662446|ref|ZP_03518376.1| cobalamin synthesis protein [Rhizobium etli IE4771]
Length = 316
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 19/22 (86%)
Query: 89 IPPDNRIPATIITGFLGSGKNT 110
+P DNR+P T+++GFLG+GK T
Sbjct: 1 VPMDNRLPVTVLSGFLGAGKTT 22
>gi|395010283|ref|ZP_10393676.1| cobalamin biosynthesis protein CobW [Acidovorax sp. CF316]
gi|394311643|gb|EJE48966.1| cobalamin biosynthesis protein CobW [Acidovorax sp. CF316]
Length = 354
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 93 NRIPATIITGFLGSGKNT 110
N+IPATI+TGFLGSGK T
Sbjct: 4 NKIPATIVTGFLGSGKTT 21
>gi|116788570|gb|ABK24925.1| unknown [Picea sitchensis]
Length = 430
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 73 SAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
+A+ T ++ D RIPAT++TGFLGSGK T
Sbjct: 70 TASVATQQHAEAVIPAAGGDPRIPATVLTGFLGSGKTT 107
>gi|78061168|ref|YP_371076.1| cobalamin synthesis protein/P47K [Burkholderia sp. 383]
gi|77969053|gb|ABB10432.1| Cobalamin synthesis protein/P47K [Burkholderia sp. 383]
Length = 423
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 87 TKIPPDNRIPATIITGFLGSGKNT 110
T +PP R+P T+++GFLG+GK T
Sbjct: 24 TALPPSTRLPVTVLSGFLGAGKTT 47
>gi|302851988|ref|XP_002957516.1| hypothetical protein VOLCADRAFT_107727 [Volvox carteri f.
nagariensis]
gi|300257158|gb|EFJ41410.1| hypothetical protein VOLCADRAFT_107727 [Volvox carteri f.
nagariensis]
Length = 347
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 16/24 (66%), Positives = 18/24 (75%), Gaps = 3/24 (12%)
Query: 90 PPD---NRIPATIITGFLGSGKNT 110
PPD RIP T++TGFLGSGK T
Sbjct: 12 PPDVDAQRIPVTVVTGFLGSGKTT 35
>gi|317027542|ref|XP_001399509.2| CobW domain protein [Aspergillus niger CBS 513.88]
Length = 396
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 73 SAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
S A A + L T PP NR+P T++TG+LG+GK T
Sbjct: 14 STAPDVAPPSTSLDT--PPQNRVPITLVTGYLGAGKTT 49
>gi|149174623|ref|ZP_01853249.1| riboflavin biosynthesis protein RibD [Planctomyces maris DSM 8797]
gi|148846733|gb|EDL61070.1| riboflavin biosynthesis protein RibD [Planctomyces maris DSM 8797]
Length = 377
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Query: 23 PFAKIRTTVLPVLFKPRARNLSYKTMPSSTHSEFIAFKVPRPYRRF------TASASAAA 76
PF K T LP + A L K + HS++I+ PR R +
Sbjct: 145 PFVKRVTQGLPWIHAKWAMTLDGKIATRTGHSQWIS--NPRSRERVHELRGRMDAIMVGQ 202
Query: 77 TTASEDSDLLTKIPPDNRIPATII 100
TA+ D LLT PP RIPA I+
Sbjct: 203 RTATADDPLLTARPPGKRIPARIV 226
>gi|387127563|ref|YP_006296168.1| metal chaperone [Methylophaga sp. JAM1]
gi|386274625|gb|AFI84523.1| Putative metal chaperone [Methylophaga sp. JAM1]
Length = 403
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 88 KIPPDNRIPATIITGFLGSGKNT 110
K+ PD R+P T+++GFLG+GK T
Sbjct: 2 KLNPDKRLPVTVLSGFLGAGKTT 24
>gi|331007012|ref|ZP_08330248.1| CobW GTPase involved in cobalt insertion for B12 biosynthesis
[gamma proteobacterium IMCC1989]
gi|330419174|gb|EGG93604.1| CobW GTPase involved in cobalt insertion for B12 biosynthesis
[gamma proteobacterium IMCC1989]
Length = 366
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 93 NRIPATIITGFLGSGKNT 110
N+IPATI+TGFLGSGK T
Sbjct: 4 NKIPATIVTGFLGSGKTT 21
>gi|403215295|emb|CCK69794.1| hypothetical protein KNAG_0D00410 [Kazachstania naganishii CBS
8797]
Length = 425
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/20 (75%), Positives = 17/20 (85%)
Query: 91 PDNRIPATIITGFLGSGKNT 110
P RIP TIITG+LGSGK+T
Sbjct: 64 PQKRIPVTIITGYLGSGKST 83
>gi|303272475|ref|XP_003055599.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463573|gb|EEH60851.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 424
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 13/20 (65%), Positives = 17/20 (85%)
Query: 91 PDNRIPATIITGFLGSGKNT 110
PD R+P T++TG+LGSGK T
Sbjct: 8 PDTRVPVTVLTGYLGSGKTT 27
>gi|407974799|ref|ZP_11155707.1| cobalamin synthesis protein, P47K [Nitratireductor indicus C115]
gi|407429882|gb|EKF42558.1| cobalamin synthesis protein, P47K [Nitratireductor indicus C115]
Length = 405
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 13/20 (65%), Positives = 18/20 (90%)
Query: 91 PDNRIPATIITGFLGSGKNT 110
PDNR+P T+++GFLG+GK T
Sbjct: 4 PDNRLPVTVLSGFLGAGKTT 23
>gi|298709695|emb|CBJ31500.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 589
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 15/21 (71%), Positives = 17/21 (80%)
Query: 90 PPDNRIPATIITGFLGSGKNT 110
P D RIP TI+TG+LGSGK T
Sbjct: 12 PNDTRIPVTILTGYLGSGKTT 32
>gi|50294806|ref|XP_449814.1| hypothetical protein [Candida glabrata CBS 138]
gi|49529128|emb|CAG62792.1| unnamed protein product [Candida glabrata]
Length = 432
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 13/82 (15%)
Query: 32 LPVLFKPRARNLSY---KTMPSSTHSEFIAFKVPRPYRRFTASASAAATTASEDSDLLTK 88
LP L R NL+ K H+ A KV R ++ S+ + +E
Sbjct: 15 LPPLVTGRESNLAEILGKVRNDGGHNLVSADKVDRSNKQVEVPLSSNSGIQTEK------ 68
Query: 89 IPPDNRIPATIITGFLGSGKNT 110
RIP TIITG+LGSGK+T
Sbjct: 69 ----KRIPVTIITGYLGSGKST 86
>gi|448746787|ref|ZP_21728452.1| Cobalamin (vitamin B12) biosynthesis CobW [Halomonas titanicae BH1]
gi|445565715|gb|ELY21824.1| Cobalamin (vitamin B12) biosynthesis CobW [Halomonas titanicae BH1]
Length = 373
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 17/18 (94%)
Query: 93 NRIPATIITGFLGSGKNT 110
N+IPAT++TGFLGSGK T
Sbjct: 4 NKIPATVVTGFLGSGKTT 21
>gi|58332214|ref|NP_001011255.1| COBW domain containing 2 [Xenopus (Silurana) tropicalis]
gi|55778678|gb|AAH86500.1| hypothetical LOC496702 [Xenopus (Silurana) tropicalis]
Length = 362
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 14/20 (70%), Positives = 17/20 (85%)
Query: 91 PDNRIPATIITGFLGSGKNT 110
PD +IP TIITG+LG+GK T
Sbjct: 22 PDRKIPVTIITGYLGAGKTT 41
>gi|83649134|ref|YP_437569.1| G3E family GTPase [Hahella chejuensis KCTC 2396]
gi|83637177|gb|ABC33144.1| putative GTPase (G3E family) [Hahella chejuensis KCTC 2396]
Length = 356
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 17/18 (94%)
Query: 93 NRIPATIITGFLGSGKNT 110
N+IPAT++TGFLGSGK T
Sbjct: 4 NKIPATVVTGFLGSGKTT 21
>gi|399911644|ref|ZP_10779958.1| cobalamin biosynthesis protein CobW [Halomonas sp. KM-1]
Length = 374
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 17/18 (94%)
Query: 93 NRIPATIITGFLGSGKNT 110
N+IPAT++TGFLGSGK T
Sbjct: 4 NKIPATVVTGFLGSGKTT 21
>gi|359395385|ref|ZP_09188437.1| Protein CobW [Halomonas boliviensis LC1]
gi|357969650|gb|EHJ92097.1| Protein CobW [Halomonas boliviensis LC1]
Length = 372
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 17/18 (94%)
Query: 93 NRIPATIITGFLGSGKNT 110
N+IPAT++TGFLGSGK T
Sbjct: 4 NKIPATVVTGFLGSGKTT 21
>gi|338998738|ref|ZP_08637406.1| cobalamin biosynthesis protein CobW [Halomonas sp. TD01]
gi|338764371|gb|EGP19335.1| cobalamin biosynthesis protein CobW [Halomonas sp. TD01]
Length = 373
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 17/18 (94%)
Query: 93 NRIPATIITGFLGSGKNT 110
N+IPAT++TGFLGSGK T
Sbjct: 9 NKIPATVVTGFLGSGKTT 26
>gi|338740379|ref|YP_004677341.1| CobW/P47K family protein [Hyphomicrobium sp. MC1]
gi|337760942|emb|CCB66775.1| CobW/P47K family protein [Hyphomicrobium sp. MC1]
Length = 329
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 93 NRIPATIITGFLGSGKNT 110
+RIPAT+ITGFLGSGK T
Sbjct: 12 DRIPATVITGFLGSGKTT 29
>gi|255080074|ref|XP_002503617.1| predicted protein [Micromonas sp. RCC299]
gi|226518884|gb|ACO64875.1| predicted protein [Micromonas sp. RCC299]
Length = 444
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 15/19 (78%), Positives = 16/19 (84%)
Query: 92 DNRIPATIITGFLGSGKNT 110
D RIP TI+TGFLGSGK T
Sbjct: 50 DKRIPVTILTGFLGSGKTT 68
>gi|159469231|ref|XP_001692771.1| predicted protein [Chlamydomonas reinhardtii]
gi|158278024|gb|EDP03790.1| predicted protein [Chlamydomonas reinhardtii]
Length = 320
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/19 (78%), Positives = 16/19 (84%)
Query: 92 DNRIPATIITGFLGSGKNT 110
D RIP T+ITGFLGSGK T
Sbjct: 4 DKRIPVTVITGFLGSGKTT 22
>gi|134056420|emb|CAL00587.1| unnamed protein product [Aspergillus niger]
Length = 394
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 73 SAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
S A A + L T PP NR+P T++TG+LG+GK T
Sbjct: 14 STAPDVAPPSTSLDT--PPQNRVPITLVTGYLGAGKTT 49
>gi|418402015|ref|ZP_12975535.1| cobalamin biosynthesis protein CobW [Sinorhizobium meliloti
CCNWSX0020]
gi|359504046|gb|EHK76588.1| cobalamin biosynthesis protein CobW [Sinorhizobium meliloti
CCNWSX0020]
Length = 354
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 14/20 (70%), Positives = 17/20 (85%)
Query: 91 PDNRIPATIITGFLGSGKNT 110
P +IPAT+ITGFLG+GK T
Sbjct: 7 PQRKIPATVITGFLGAGKTT 26
>gi|145348602|ref|XP_001418735.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578965|gb|ABO97028.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 388
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 92 DNRIPATIITGFLGSGKNT 110
D+R+P TI+TGFLGSGK T
Sbjct: 1 DSRVPVTILTGFLGSGKTT 19
>gi|448323402|ref|ZP_21512864.1| cobalamin synthesis protein P47K [Natronococcus amylolyticus DSM
10524]
gi|445599894|gb|ELY53916.1| cobalamin synthesis protein P47K [Natronococcus amylolyticus DSM
10524]
Length = 393
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 13/21 (61%), Positives = 18/21 (85%)
Query: 90 PPDNRIPATIITGFLGSGKNT 110
P D+RIP TI++G+LG+GK T
Sbjct: 4 PDDDRIPVTIVSGYLGAGKTT 24
>gi|372277949|ref|ZP_09513985.1| hypothetical protein PSL1_22859 [Pantoea sp. SL1_M5]
Length = 449
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 92 DNRIPATIITGFLGSGKNT 110
D+RIP T++TGFLGSGK T
Sbjct: 4 DDRIPVTVLTGFLGSGKTT 22
>gi|428215857|ref|YP_007089001.1| putative GTPase, G3E family [Oscillatoria acuminata PCC 6304]
gi|428004238|gb|AFY85081.1| putative GTPase, G3E family [Oscillatoria acuminata PCC 6304]
Length = 389
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 77 TTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
TTA+ + + + P +P TIITGFLGSGK T
Sbjct: 3 TTATSNPESVAMDTPKYGLPVTIITGFLGSGKTT 36
>gi|15965711|ref|NP_386064.1| cobalamine biosynthesis protein [Sinorhizobium meliloti 1021]
gi|15074980|emb|CAC46537.1| Probable cobalamine biosynthesis protein [Sinorhizobium meliloti
1021]
Length = 354
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 14/20 (70%), Positives = 17/20 (85%)
Query: 91 PDNRIPATIITGFLGSGKNT 110
P +IPAT+ITGFLG+GK T
Sbjct: 7 PQRKIPATVITGFLGAGKTT 26
>gi|334316651|ref|YP_004549270.1| cobalamin biosynthesis protein CobW [Sinorhizobium meliloti AK83]
gi|384529836|ref|YP_005713924.1| cobalamin biosynthesis protein CobW [Sinorhizobium meliloti BL225C]
gi|384535824|ref|YP_005719909.1| cobalamine biosynthesis protein [Sinorhizobium meliloti SM11]
gi|407720897|ref|YP_006840559.1| protein CobW [Sinorhizobium meliloti Rm41]
gi|433613742|ref|YP_007190540.1| cobalamin biosynthesis protein CobW [Sinorhizobium meliloti GR4]
gi|333812012|gb|AEG04681.1| cobalamin biosynthesis protein CobW [Sinorhizobium meliloti BL225C]
gi|334095645|gb|AEG53656.1| cobalamin biosynthesis protein CobW [Sinorhizobium meliloti AK83]
gi|336032716|gb|AEH78648.1| cobalamine biosynthesis protein [Sinorhizobium meliloti SM11]
gi|407319129|emb|CCM67733.1| Protein CobW [Sinorhizobium meliloti Rm41]
gi|429551932|gb|AGA06941.1| cobalamin biosynthesis protein CobW [Sinorhizobium meliloti GR4]
Length = 354
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 14/20 (70%), Positives = 17/20 (85%)
Query: 91 PDNRIPATIITGFLGSGKNT 110
P +IPAT+ITGFLG+GK T
Sbjct: 7 PQRKIPATVITGFLGAGKTT 26
>gi|428203976|ref|YP_007082565.1| putative GTPase, G3E family [Pleurocapsa sp. PCC 7327]
gi|427981408|gb|AFY79008.1| putative GTPase, G3E family [Pleurocapsa sp. PCC 7327]
Length = 331
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 19/26 (73%)
Query: 85 LLTKIPPDNRIPATIITGFLGSGKNT 110
LL + P+ IP TIITGFLGSGK T
Sbjct: 4 LLIREQPNWGIPVTIITGFLGSGKTT 29
>gi|365959549|ref|YP_004941116.1| cobalamin biosynthesis protein CobW [Flavobacterium columnare ATCC
49512]
gi|365736230|gb|AEW85323.1| cobalamin biosynthesis protein CobW [Flavobacterium columnare ATCC
49512]
Length = 345
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 16/18 (88%)
Query: 93 NRIPATIITGFLGSGKNT 110
N+IP TIITGFLGSGK T
Sbjct: 3 NKIPVTIITGFLGSGKTT 20
>gi|302546725|ref|ZP_07299067.1| cobalamin synthesis protein/P47K family protein [Streptomyces
hygroscopicus ATCC 53653]
gi|302464343|gb|EFL27436.1| cobalamin synthesis protein/P47K family protein [Streptomyces
himastatinicus ATCC 53653]
Length = 340
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 14/21 (66%), Positives = 16/21 (76%)
Query: 90 PPDNRIPATIITGFLGSGKNT 110
P D R P T++TGFLGSGK T
Sbjct: 9 PRDERTPVTVLTGFLGSGKTT 29
>gi|255081180|ref|XP_002507812.1| predicted protein [Micromonas sp. RCC299]
gi|226523088|gb|ACO69070.1| predicted protein [Micromonas sp. RCC299]
Length = 428
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 86 LTKIPPDNRIPATIITGFLGSGKNT 110
+T D R+P TI+TG+LGSGK T
Sbjct: 1 MTTTSKDTRVPVTILTGYLGSGKTT 25
>gi|355675422|gb|AER95528.1| COBW domain containing 2 [Mustela putorius furo]
Length = 259
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 18/23 (78%)
Query: 88 KIPPDNRIPATIITGFLGSGKNT 110
K PD +IP TIITG+LG+GK T
Sbjct: 40 KAGPDAKIPVTIITGYLGAGKTT 62
>gi|296393544|ref|YP_003658428.1| cobalamin synthesis protein P47K [Segniliparus rotundus DSM 44985]
gi|296180691|gb|ADG97597.1| cobalamin synthesis protein P47K [Segniliparus rotundus DSM 44985]
Length = 388
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 13/22 (59%), Positives = 19/22 (86%)
Query: 89 IPPDNRIPATIITGFLGSGKNT 110
IP D+R+P T+++GFLG+GK T
Sbjct: 7 IPKDSRLPVTVLSGFLGAGKTT 28
>gi|17232214|ref|NP_488762.1| hypothetical protein all4722 [Nostoc sp. PCC 7120]
gi|17133859|dbj|BAB76421.1| all4722 [Nostoc sp. PCC 7120]
Length = 353
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 77 TTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
T +E ++++ +IP +P TIITGFLGSGK T
Sbjct: 3 TLTAETTNIIPEIPKRG-MPVTIITGFLGSGKTT 35
>gi|374622902|ref|ZP_09695421.1| cobalamin biosynthesis protein CobW [Ectothiorhodospira sp. PHS-1]
gi|373942022|gb|EHQ52567.1| cobalamin biosynthesis protein CobW [Ectothiorhodospira sp. PHS-1]
Length = 373
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 94 RIPATIITGFLGSGKNT 110
RIPATI+TGFLGSGK T
Sbjct: 11 RIPATIVTGFLGSGKTT 27
>gi|168011035|ref|XP_001758209.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690665|gb|EDQ77031.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 346
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 15/19 (78%), Positives = 16/19 (84%)
Query: 92 DNRIPATIITGFLGSGKNT 110
DNR+ TIITGFLGSGK T
Sbjct: 1 DNRVAVTIITGFLGSGKTT 19
>gi|354565726|ref|ZP_08984900.1| cobalamin synthesis protein P47K [Fischerella sp. JSC-11]
gi|353548599|gb|EHC18044.1| cobalamin synthesis protein P47K [Fischerella sp. JSC-11]
Length = 369
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
Query: 75 AATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
AAT+ S D P +P TIITGFLGSGK T
Sbjct: 3 AATSESHSMD-----APKQGLPVTIITGFLGSGKTT 33
>gi|395781453|ref|ZP_10461871.1| hypothetical protein MCY_00268 [Bartonella rattimassiliensis 15908]
gi|395420886|gb|EJF87144.1| hypothetical protein MCY_00268 [Bartonella rattimassiliensis 15908]
Length = 267
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 16/18 (88%)
Query: 93 NRIPATIITGFLGSGKNT 110
NRIP T+ITGFLGSGK T
Sbjct: 16 NRIPLTLITGFLGSGKTT 33
>gi|350579289|ref|XP_003480576.1| PREDICTED: COBW domain-containing protein 2 [Sus scrofa]
Length = 348
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 15/23 (65%), Positives = 17/23 (73%)
Query: 88 KIPPDNRIPATIITGFLGSGKNT 110
K P RIP TIITG+LG+GK T
Sbjct: 36 KFDPGARIPVTIITGYLGAGKTT 58
>gi|350579287|ref|XP_003480575.1| PREDICTED: COBW domain-containing protein 2 [Sus scrofa]
Length = 377
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 15/23 (65%), Positives = 17/23 (73%)
Query: 88 KIPPDNRIPATIITGFLGSGKNT 110
K P RIP TIITG+LG+GK T
Sbjct: 36 KFDPGARIPVTIITGYLGAGKTT 58
>gi|350579285|ref|XP_001924427.4| PREDICTED: COBW domain-containing protein 2 isoform 1 [Sus scrofa]
Length = 396
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 15/23 (65%), Positives = 17/23 (73%)
Query: 88 KIPPDNRIPATIITGFLGSGKNT 110
K P RIP TIITG+LG+GK T
Sbjct: 36 KFDPGARIPVTIITGYLGAGKTT 58
>gi|388852069|emb|CCF54245.1| related to Cobalamin synthesis protein [Ustilago hordei]
Length = 756
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 37 KPRARNLSYKTMPSSTHSEFIAFKVPRPYRRFTASASAAATTASEDSDLLT-KIPPDNRI 95
KPR+R +K ++ S F + + A SA A ASE +T K +R+
Sbjct: 172 KPRSRAEMHKE--AAFLSSFFTIQGKFDASKIEAFHSALAKRASETQPSVTQKRSRVDRL 229
Query: 96 PATIITGFLGSGKNT 110
P T+++GFLG+GK T
Sbjct: 230 PVTLLSGFLGAGKTT 244
>gi|291566545|dbj|BAI88817.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 347
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 21/34 (61%)
Query: 77 TTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
T A++ S L P +P TIITGFLGSGK T
Sbjct: 5 TGATQSSSALIPDLPKRGMPVTIITGFLGSGKTT 38
>gi|167746155|ref|ZP_02418282.1| hypothetical protein ANACAC_00851 [Anaerostipes caccae DSM 14662]
gi|167654670|gb|EDR98799.1| DNA-binding helix-turn-helix protein [Anaerostipes caccae DSM
14662]
Length = 180
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 5 LSTEMATTFLSFTARPQNPFAKIRTTVLPVLFKPRARNLSYKTMPSSTHSEFIAFKVP-R 63
+S M F + T RP+ P+ I+T + L + R +Y P +F + +
Sbjct: 52 ISNGMKVPFDALTVRPKTPYEIIKTADIEPLLEDSGRVKNYPLFPDDADRKFAVYYLKLE 111
Query: 64 PYRRFTASASAAATT 78
PY R+ + A TT
Sbjct: 112 PYSRWESEAHLKGTT 126
>gi|409991017|ref|ZP_11274318.1| cobalamin synthesis protein/P47K [Arthrospira platensis str.
Paraca]
gi|409938125|gb|EKN79488.1| cobalamin synthesis protein/P47K [Arthrospira platensis str.
Paraca]
Length = 340
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 21/34 (61%)
Query: 77 TTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
T A++ S L P +P TIITGFLGSGK T
Sbjct: 2 TGATQSSSALIPDLPKRGMPVTIITGFLGSGKTT 35
>gi|83769784|dbj|BAE59919.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 409
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 12/21 (57%), Positives = 19/21 (90%)
Query: 90 PPDNRIPATIITGFLGSGKNT 110
PP++R+P T++TG+LG+GK T
Sbjct: 36 PPESRVPITLVTGYLGAGKTT 56
>gi|50552910|ref|XP_503865.1| YALI0E12485p [Yarrowia lipolytica]
gi|49649734|emb|CAG79458.1| YALI0E12485p [Yarrowia lipolytica CLIB122]
Length = 414
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 24/75 (32%)
Query: 60 KVPRPYRRFTASASAAATTASEDSD---LLTKIPP---------------------DNRI 95
KV + A+ T A ED D +L PP ++R+
Sbjct: 8 KVAKTINDTKTDATVPTTRADEDDDEIPMLVSGPPPTGMFQTQSEHHYSTFDVPQVEDRV 67
Query: 96 PATIITGFLGSGKNT 110
P TIITG+LGSGK+T
Sbjct: 68 PITIITGYLGSGKST 82
>gi|317473295|ref|ZP_07932590.1| hypothetical protein HMPREF1011_02940 [Anaerostipes sp. 3_2_56FAA]
gi|316899131|gb|EFV21150.1| hypothetical protein HMPREF1011_02940 [Anaerostipes sp. 3_2_56FAA]
Length = 180
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 5 LSTEMATTFLSFTARPQNPFAKIRTTVLPVLFKPRARNLSYKTMPSSTHSEFIAFKVP-R 63
+S M F + T RP+ P+ I+T + L + R +Y P +F + +
Sbjct: 52 ISNGMKVPFDALTVRPKTPYEIIKTADIEPLLEDSGRVKNYPLFPDDADRKFAVYYLKLE 111
Query: 64 PYRRFTASASAAATT 78
PY R+ + A TT
Sbjct: 112 PYSRWESEAHLKGTT 126
>gi|238496471|ref|XP_002379471.1| CobW domain protein [Aspergillus flavus NRRL3357]
gi|317147155|ref|XP_001821921.2| CobW domain protein [Aspergillus oryzae RIB40]
gi|220694351|gb|EED50695.1| CobW domain protein [Aspergillus flavus NRRL3357]
Length = 405
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 12/21 (57%), Positives = 19/21 (90%)
Query: 90 PPDNRIPATIITGFLGSGKNT 110
PP++R+P T++TG+LG+GK T
Sbjct: 36 PPESRVPITLVTGYLGAGKTT 56
>gi|220906517|ref|YP_002481828.1| cobalamin synthesis protein P47K [Cyanothece sp. PCC 7425]
gi|219863128|gb|ACL43467.1| cobalamin synthesis protein P47K [Cyanothece sp. PCC 7425]
Length = 384
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 17/29 (58%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Query: 83 SDLLTKI-PPDNRIPATIITGFLGSGKNT 110
SDL++ + P + +P TIITGFLGSGK T
Sbjct: 5 SDLISAMDAPKHGLPVTIITGFLGSGKTT 33
>gi|395785197|ref|ZP_10464930.1| hypothetical protein ME5_00248 [Bartonella tamiae Th239]
gi|423717903|ref|ZP_17692093.1| hypothetical protein MEG_01633 [Bartonella tamiae Th307]
gi|395425384|gb|EJF91553.1| hypothetical protein ME5_00248 [Bartonella tamiae Th239]
gi|395426336|gb|EJF92463.1| hypothetical protein MEG_01633 [Bartonella tamiae Th307]
Length = 363
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 89 IPPDNRIPATIITGFLGSGKNT 110
IP RIP T++TGFLG+GK T
Sbjct: 2 IPSSKRIPVTVLTGFLGAGKTT 23
>gi|259479616|tpe|CBF70002.1| TPA: CobW domain protein (AFU_orthologue; AFUA_2G11720)
[Aspergillus nidulans FGSC A4]
Length = 383
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 19/23 (82%)
Query: 88 KIPPDNRIPATIITGFLGSGKNT 110
++PP R+P T++TG+LG+GK T
Sbjct: 27 ELPPQQRVPITLVTGYLGAGKTT 49
>gi|333908930|ref|YP_004482516.1| cobalamin biosynthesis protein CobW [Marinomonas posidonica
IVIA-Po-181]
gi|333478936|gb|AEF55597.1| cobalamin biosynthesis protein CobW [Marinomonas posidonica
IVIA-Po-181]
Length = 359
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 16/18 (88%)
Query: 93 NRIPATIITGFLGSGKNT 110
N+IP TI+TGFLGSGK T
Sbjct: 4 NKIPTTIVTGFLGSGKTT 21
>gi|152995405|ref|YP_001340240.1| cobalamin biosynthesis protein CobW [Marinomonas sp. MWYL1]
gi|150836329|gb|ABR70305.1| cobalamin biosynthesis protein CobW [Marinomonas sp. MWYL1]
Length = 360
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 16/18 (88%)
Query: 93 NRIPATIITGFLGSGKNT 110
N+IP TI+TGFLGSGK T
Sbjct: 4 NKIPTTIVTGFLGSGKTT 21
>gi|87122573|ref|ZP_01078451.1| cobalamin biosynthesis protein CobW [Marinomonas sp. MED121]
gi|86162110|gb|EAQ63397.1| cobalamin biosynthesis protein CobW [Marinomonas sp. MED121]
Length = 359
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 16/18 (88%)
Query: 93 NRIPATIITGFLGSGKNT 110
N+IP TI+TGFLGSGK T
Sbjct: 4 NKIPTTIVTGFLGSGKTT 21
>gi|423066020|ref|ZP_17054810.1| cobalamin synthesis protein P47K [Arthrospira platensis C1]
gi|406712519|gb|EKD07704.1| cobalamin synthesis protein P47K [Arthrospira platensis C1]
Length = 343
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 21/34 (61%)
Query: 77 TTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
T A++ S L P +P TIITGFLGSGK T
Sbjct: 2 TGATQSSSALIPDLPKRGMPVTIITGFLGSGKTT 35
>gi|294084141|ref|YP_003550899.1| cobalamin biosynthesis protein CobW [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292663714|gb|ADE38815.1| cobalamin biosynthesis protein CobW [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 358
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 94 RIPATIITGFLGSGKNT 110
RIPAT+ITGFLGSGK T
Sbjct: 5 RIPATVITGFLGSGKTT 21
>gi|209524082|ref|ZP_03272633.1| cobalamin synthesis protein P47K [Arthrospira maxima CS-328]
gi|209495457|gb|EDZ95761.1| cobalamin synthesis protein P47K [Arthrospira maxima CS-328]
Length = 345
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 21/34 (61%)
Query: 77 TTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
T A++ S L P +P TIITGFLGSGK T
Sbjct: 2 TGATQSSSALIPDLPKRGMPVTIITGFLGSGKTT 35
>gi|376004157|ref|ZP_09781915.1| putative cobalamin biosynthesis protein, cobW family [Arthrospira
sp. PCC 8005]
gi|375327491|emb|CCE17668.1| putative cobalamin biosynthesis protein, cobW family [Arthrospira
sp. PCC 8005]
Length = 343
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 21/34 (61%)
Query: 77 TTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
T A++ S L P +P TIITGFLGSGK T
Sbjct: 2 TGATQSSSALIPDLPKRGMPVTIITGFLGSGKTT 35
>gi|254492003|ref|ZP_05105181.1| CobW/P47K family protein [Methylophaga thiooxidans DMS010]
gi|224462818|gb|EEF79089.1| CobW/P47K family protein [Methylophaga thiooxydans DMS010]
Length = 403
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 89 IPPDNRIPATIITGFLGSGKNT 110
I DNR+P T+++GFLG+GK T
Sbjct: 3 IETDNRLPVTVLSGFLGAGKTT 24
>gi|317053880|ref|YP_004117905.1| cobalamin synthesis protein P47K [Pantoea sp. At-9b]
gi|316951875|gb|ADU71349.1| cobalamin synthesis protein P47K [Pantoea sp. At-9b]
Length = 407
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 12/20 (60%), Positives = 18/20 (90%)
Query: 91 PDNRIPATIITGFLGSGKNT 110
PD+R+P T+++GFLG+GK T
Sbjct: 5 PDSRLPVTVLSGFLGAGKTT 24
>gi|348517328|ref|XP_003446186.1| PREDICTED: COBW domain-containing protein 2-like [Oreochromis
niloticus]
Length = 367
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 14/21 (66%), Positives = 17/21 (80%)
Query: 90 PPDNRIPATIITGFLGSGKNT 110
PP +IP TIITG+LG+GK T
Sbjct: 21 PPVGQIPVTIITGYLGAGKTT 41
>gi|398394293|ref|XP_003850605.1| hypothetical protein MYCGRDRAFT_86741 [Zymoseptoria tritici IPO323]
gi|339470484|gb|EGP85581.1| hypothetical protein MYCGRDRAFT_86741 [Zymoseptoria tritici IPO323]
Length = 370
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 15/22 (68%), Positives = 17/22 (77%)
Query: 89 IPPDNRIPATIITGFLGSGKNT 110
+P +RIP TIITGF GSGK T
Sbjct: 1 MPSHSRIPITIITGFAGSGKTT 22
>gi|67540042|ref|XP_663795.1| hypothetical protein AN6191.2 [Aspergillus nidulans FGSC A4]
gi|40738787|gb|EAA57977.1| hypothetical protein AN6191.2 [Aspergillus nidulans FGSC A4]
Length = 392
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 19/23 (82%)
Query: 88 KIPPDNRIPATIITGFLGSGKNT 110
++PP R+P T++TG+LG+GK T
Sbjct: 27 ELPPQQRVPITLVTGYLGAGKTT 49
>gi|391868864|gb|EIT78073.1| cobalamin synthesis protein [Aspergillus oryzae 3.042]
Length = 291
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 19/21 (90%)
Query: 90 PPDNRIPATIITGFLGSGKNT 110
PP++R+P T++TG+LG+GK T
Sbjct: 36 PPESRVPITLVTGYLGAGKTT 56
>gi|167523645|ref|XP_001746159.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775430|gb|EDQ89054.1| predicted protein [Monosiga brevicollis MX1]
Length = 388
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 7/50 (14%)
Query: 61 VPRPYRRFTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
VP P + S+SAA A++ D +P TI+TG+LG+GK T
Sbjct: 27 VPAPLSQAEPSSSAAVPVAADQVDA-------KPVPVTILTGYLGAGKTT 69
>gi|412991074|emb|CCO15919.1| predicted protein [Bathycoccus prasinos]
Length = 545
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 92 DNRIPATIITGFLGSGKNT 110
D RIP T++TGFLGSGK T
Sbjct: 129 DERIPITVLTGFLGSGKTT 147
>gi|307544421|ref|YP_003896900.1| cobalamin biosynthesis protein CobW [Halomonas elongata DSM 2581]
gi|307216445|emb|CBV41715.1| cobalamin biosynthesis protein CobW [Halomonas elongata DSM 2581]
Length = 370
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 13/18 (72%), Positives = 17/18 (94%)
Query: 93 NRIPATIITGFLGSGKNT 110
N+IP+T++TGFLGSGK T
Sbjct: 4 NKIPSTVVTGFLGSGKTT 21
>gi|113474312|ref|YP_720373.1| cobalamin synthesis protein, P47K [Trichodesmium erythraeum IMS101]
gi|110165360|gb|ABG49900.1| cobalamin synthesis protein, P47K [Trichodesmium erythraeum IMS101]
Length = 382
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
Query: 77 TTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
TT ++S++ T P + +P TIITGFLGSGK T
Sbjct: 5 TTQLDNSNIDT---PKHGLPVTIITGFLGSGKTT 35
>gi|217979391|ref|YP_002363538.1| cobalamin biosynthesis protein CobW [Methylocella silvestris BL2]
gi|217504767|gb|ACK52176.1| cobalamin biosynthesis protein CobW [Methylocella silvestris BL2]
Length = 349
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 93 NRIPATIITGFLGSGKNT 110
+RIPATIITGFLG+GK T
Sbjct: 10 SRIPATIITGFLGAGKTT 27
>gi|72382024|ref|YP_291379.1| cobalamin synthesis protein [Prochlorococcus marinus str. NATL2A]
gi|72001874|gb|AAZ57676.1| putative cobalamin synthesis protein [Prochlorococcus marinus str.
NATL2A]
Length = 364
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 13/18 (72%), Positives = 16/18 (88%)
Query: 93 NRIPATIITGFLGSGKNT 110
NR+P T++TGFLGSGK T
Sbjct: 4 NRLPVTVVTGFLGSGKTT 21
>gi|75908169|ref|YP_322465.1| cobalamin synthesis protein/P47K [Anabaena variabilis ATCC 29413]
gi|75701894|gb|ABA21570.1| Cobalamin synthesis protein/P47K [Anabaena variabilis ATCC 29413]
Length = 349
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 77 TTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
T +E + ++ +IP +P TIITGFLGSGK T
Sbjct: 3 TLTAETTSIIPEIPKRG-MPVTIITGFLGSGKTT 35
>gi|124025523|ref|YP_001014639.1| cobalamin synthesis protein [Prochlorococcus marinus str. NATL1A]
gi|123960591|gb|ABM75374.1| putative cobalamin synthesis protein [Prochlorococcus marinus str.
NATL1A]
Length = 351
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 13/18 (72%), Positives = 16/18 (88%)
Query: 93 NRIPATIITGFLGSGKNT 110
NR+P T++TGFLGSGK T
Sbjct: 4 NRLPVTVVTGFLGSGKTT 21
>gi|428311219|ref|YP_007122196.1| GTPase, G3E family [Microcoleus sp. PCC 7113]
gi|428252831|gb|AFZ18790.1| putative GTPase, G3E family [Microcoleus sp. PCC 7113]
Length = 367
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 19/25 (76%)
Query: 86 LTKIPPDNRIPATIITGFLGSGKNT 110
L+++P +P TIITGFLGSGK T
Sbjct: 5 LSELPLKRGMPVTIITGFLGSGKTT 29
>gi|440681194|ref|YP_007155989.1| cobalamin synthesis protein P47K [Anabaena cylindrica PCC 7122]
gi|428678313|gb|AFZ57079.1| cobalamin synthesis protein P47K [Anabaena cylindrica PCC 7122]
Length = 369
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 77 TTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
TTA+ +S + P +P TIITGFLGSGK T
Sbjct: 3 TTATSESHPMEA--PKQGLPVTIITGFLGSGKTT 34
>gi|395448414|ref|YP_006388667.1| cobalamin synthesis protein [Pseudomonas putida ND6]
gi|388562411|gb|AFK71552.1| cobalamin synthesis protein [Pseudomonas putida ND6]
Length = 364
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 92 DNRIPATIITGFLGSGKNT 110
D+RIP T++TGFLGSGK T
Sbjct: 6 DSRIPVTLLTGFLGSGKTT 24
>gi|421497666|ref|ZP_15944822.1| cobalamin synthesis protein/P47K family protein [Aeromonas media
WS]
gi|407183314|gb|EKE57215.1| cobalamin synthesis protein/P47K family protein [Aeromonas media
WS]
Length = 372
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 92 DNRIPATIITGFLGSGKNT 110
D RIP T++TGFLGSGK T
Sbjct: 3 DTRIPVTLLTGFLGSGKTT 21
>gi|338740675|ref|YP_004677637.1| nitrile hydratase activator-like regulatory protein [Hyphomicrobium
sp. MC1]
gi|337761238|emb|CCB67071.1| putative nitrile hydratase activator-like regulatory protein,
putative CobW-like cobalamin biosynthesis protein
[Hyphomicrobium sp. MC1]
Length = 419
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 5/34 (14%)
Query: 82 DSDLLTK-----IPPDNRIPATIITGFLGSGKNT 110
DSD++T + D R+P T+++GFLG+GK T
Sbjct: 2 DSDIITHLKKTAVTKDGRLPVTVLSGFLGAGKTT 35
>gi|398828580|ref|ZP_10586780.1| cobalamin biosynthesis protein CobW [Phyllobacterium sp. YR531]
gi|398217438|gb|EJN03955.1| cobalamin biosynthesis protein CobW [Phyllobacterium sp. YR531]
Length = 350
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 17/18 (94%)
Query: 93 NRIPATIITGFLGSGKNT 110
++IPAT+ITGFLGSGK T
Sbjct: 4 HKIPATVITGFLGSGKTT 21
>gi|423204226|ref|ZP_17190782.1| hypothetical protein HMPREF1168_00417 [Aeromonas veronii AMC34]
gi|404627431|gb|EKB24232.1| hypothetical protein HMPREF1168_00417 [Aeromonas veronii AMC34]
Length = 375
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 92 DNRIPATIITGFLGSGKNT 110
D+RIP T++TGFLGSGK T
Sbjct: 6 DSRIPVTLLTGFLGSGKTT 24
>gi|419955583|ref|ZP_14471709.1| cobalamin synthesis protein, P47K [Pseudomonas stutzeri TS44]
gi|387967624|gb|EIK51923.1| cobalamin synthesis protein, P47K [Pseudomonas stutzeri TS44]
Length = 401
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 12/19 (63%), Positives = 18/19 (94%)
Query: 92 DNRIPATIITGFLGSGKNT 110
DNR+P T+++GFLG+GK+T
Sbjct: 2 DNRLPVTVLSGFLGAGKST 20
>gi|134095845|ref|YP_001100920.1| CobW protein involved in cobalamin synthesis [Herminiimonas
arsenicoxydans]
gi|133739748|emb|CAL62799.1| Putative cobalamin synthesis CobW [Herminiimonas arsenicoxydans]
Length = 382
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 92 DNRIPATIITGFLGSGKNT 110
D RIP T++TGFLGSGK T
Sbjct: 11 DQRIPITLLTGFLGSGKTT 29
>gi|449667105|ref|XP_002157915.2| PREDICTED: COBW domain-containing protein 1-like [Hydra
magnipapillata]
Length = 346
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 89 IPPDNRIPATIITGFLGSGKNT 110
+ P+ IP TIITGFLG+GK T
Sbjct: 12 VEPNKPIPVTIITGFLGAGKTT 33
>gi|326794565|ref|YP_004312385.1| cobalamin biosynthesis protein CobW [Marinomonas mediterranea
MMB-1]
gi|326545329|gb|ADZ90549.1| cobalamin biosynthesis protein CobW [Marinomonas mediterranea
MMB-1]
Length = 358
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 13/18 (72%), Positives = 16/18 (88%)
Query: 93 NRIPATIITGFLGSGKNT 110
N+IP T++TGFLGSGK T
Sbjct: 4 NKIPTTVVTGFLGSGKTT 21
>gi|89092584|ref|ZP_01165537.1| Cobalamin synthesis [Neptuniibacter caesariensis]
gi|89083096|gb|EAR62315.1| Cobalamin synthesis [Oceanospirillum sp. MED92]
Length = 359
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 13/18 (72%), Positives = 16/18 (88%)
Query: 93 NRIPATIITGFLGSGKNT 110
N+IP T++TGFLGSGK T
Sbjct: 4 NKIPTTVVTGFLGSGKTT 21
>gi|260942245|ref|XP_002615421.1| hypothetical protein CLUG_04303 [Clavispora lusitaniae ATCC 42720]
gi|238850711|gb|EEQ40175.1| hypothetical protein CLUG_04303 [Clavispora lusitaniae ATCC 42720]
Length = 508
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 78 TASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
T + S + K +RIP TI+TG+LGSGK+T
Sbjct: 130 TVEDTSAYVPKPENKDRIPVTIVTGYLGSGKST 162
>gi|432957526|ref|XP_004085838.1| PREDICTED: COBW domain-containing protein 1-like, partial [Oryzias
latipes]
Length = 125
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 17/21 (80%)
Query: 90 PPDNRIPATIITGFLGSGKNT 110
PP +IP TIITG+LG+GK T
Sbjct: 19 PPAQQIPVTIITGYLGAGKTT 39
>gi|345566143|gb|EGX49089.1| hypothetical protein AOL_s00079g43 [Arthrobotrys oligospora ATCC
24927]
Length = 421
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 77 TTASEDSDLL--TKIPPDNRIPATIITGFLGSGKNT 110
+T D DL + P + R+P TI+TG+LG+GK T
Sbjct: 23 STNDVDMDLAFGEETPKEQRVPITIVTGYLGAGKTT 58
>gi|145297519|ref|YP_001140360.1| hypothetical protein ASA_0434 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|418360567|ref|ZP_12961241.1| hypothetical protein IYQ_09349 [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|142850291|gb|ABO88612.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
salmonicida A449]
gi|356688168|gb|EHI52731.1| hypothetical protein IYQ_09349 [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 375
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 92 DNRIPATIITGFLGSGKNT 110
D RIP T++TGFLGSGK T
Sbjct: 6 DTRIPVTLLTGFLGSGKTT 24
>gi|149910837|ref|ZP_01899470.1| cobalamin biosynthesis protein CobW [Moritella sp. PE36]
gi|149806078|gb|EDM66059.1| cobalamin biosynthesis protein CobW [Moritella sp. PE36]
Length = 366
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 13/18 (72%), Positives = 16/18 (88%)
Query: 93 NRIPATIITGFLGSGKNT 110
N+IP T++TGFLGSGK T
Sbjct: 4 NKIPVTVVTGFLGSGKTT 21
>gi|254500464|ref|ZP_05112615.1| cobalamin biosynthesis protein CobW [Labrenzia alexandrii DFL-11]
gi|222436535|gb|EEE43214.1| cobalamin biosynthesis protein CobW [Labrenzia alexandrii DFL-11]
Length = 371
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 87 TKIPPDNRIPATIITGFLGSGKNT 110
+ + P +IPATI+TGFLG+GK T
Sbjct: 4 STLRPGQKIPATIVTGFLGAGKTT 27
>gi|253996674|ref|YP_003048738.1| cobalamin synthesis protein P47K [Methylotenera mobilis JLW8]
gi|253983353|gb|ACT48211.1| cobalamin synthesis protein P47K [Methylotenera mobilis JLW8]
Length = 338
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 92 DNRIPATIITGFLGSGKNT 110
D RIP T++TGFLGSGK T
Sbjct: 2 DKRIPVTLLTGFLGSGKTT 20
>gi|117618352|ref|YP_858290.1| cobalamin synthesis protein/P47K family protein [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|117559759|gb|ABK36707.1| cobalamin synthesis protein/P47K family protein [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
Length = 372
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 92 DNRIPATIITGFLGSGKNT 110
D RIP T++TGFLGSGK T
Sbjct: 3 DTRIPVTLLTGFLGSGKTT 21
>gi|423201361|ref|ZP_17187941.1| hypothetical protein HMPREF1167_01524 [Aeromonas veronii AER39]
gi|404617047|gb|EKB13984.1| hypothetical protein HMPREF1167_01524 [Aeromonas veronii AER39]
Length = 375
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 92 DNRIPATIITGFLGSGKNT 110
D RIP T++TGFLGSGK T
Sbjct: 6 DTRIPVTLLTGFLGSGKTT 24
>gi|330828073|ref|YP_004391025.1| Cobalamin synthesis protein/P47K family protein [Aeromonas veronii
B565]
gi|423211239|ref|ZP_17197792.1| hypothetical protein HMPREF1169_03310 [Aeromonas veronii AER397]
gi|328803209|gb|AEB48408.1| Cobalamin synthesis protein/P47K family protein [Aeromonas veronii
B565]
gi|404613834|gb|EKB10847.1| hypothetical protein HMPREF1169_03310 [Aeromonas veronii AER397]
Length = 375
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 92 DNRIPATIITGFLGSGKNT 110
D RIP T++TGFLGSGK T
Sbjct: 6 DTRIPVTLLTGFLGSGKTT 24
>gi|340368328|ref|XP_003382704.1| PREDICTED: putative metal chaperone YciC-like [Amphimedon
queenslandica]
Length = 510
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 90 PPDNRIPATIITGFLGSGKNT 110
P R+P T++TGFLGSGK T
Sbjct: 19 PKKKRLPVTLVTGFLGSGKTT 39
>gi|334120687|ref|ZP_08494766.1| cobalamin synthesis protein P47K [Microcoleus vaginatus FGP-2]
gi|333456289|gb|EGK84924.1| cobalamin synthesis protein P47K [Microcoleus vaginatus FGP-2]
Length = 370
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 76 ATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
+TT SE + P + +P TIITGFLGSGK T
Sbjct: 3 STTQSETEQAMGA--PKHGLPVTIITGFLGSGKTT 35
>gi|406674671|ref|ZP_11081865.1| hypothetical protein HMPREF1170_00073 [Aeromonas veronii AMC35]
gi|404628674|gb|EKB25449.1| hypothetical protein HMPREF1170_00073 [Aeromonas veronii AMC35]
Length = 375
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 92 DNRIPATIITGFLGSGKNT 110
D RIP T++TGFLGSGK T
Sbjct: 6 DTRIPVTLLTGFLGSGKTT 24
>gi|118589078|ref|ZP_01546485.1| Cobalamin biosynthesis CobW [Stappia aggregata IAM 12614]
gi|118438407|gb|EAV45041.1| Cobalamin biosynthesis CobW [Stappia aggregata IAM 12614]
Length = 373
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 87 TKIPPDNRIPATIITGFLGSGKNT 110
+ + P +IPATI+TGFLG+GK T
Sbjct: 4 SSLQPGAKIPATIVTGFLGAGKTT 27
>gi|411011930|ref|ZP_11388259.1| hypothetical protein AaquA_19622 [Aeromonas aquariorum AAK1]
Length = 375
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 92 DNRIPATIITGFLGSGKNT 110
D RIP T++TGFLGSGK T
Sbjct: 6 DTRIPVTLLTGFLGSGKTT 24
>gi|423198423|ref|ZP_17185006.1| hypothetical protein HMPREF1171_03038 [Aeromonas hydrophila SSU]
gi|404630315|gb|EKB27013.1| hypothetical protein HMPREF1171_03038 [Aeromonas hydrophila SSU]
Length = 375
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 92 DNRIPATIITGFLGSGKNT 110
D RIP T++TGFLGSGK T
Sbjct: 6 DTRIPVTLLTGFLGSGKTT 24
>gi|190347516|gb|EDK39799.2| hypothetical protein PGUG_03897 [Meyerozyma guilliermondii ATCC
6260]
Length = 406
Score = 34.7 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 92 DNRIPATIITGFLGSGKNT 110
D +IP TIITG+LGSGK+T
Sbjct: 40 DKKIPITIITGYLGSGKST 58
>gi|163761066|ref|ZP_02168143.1| cobalamin synthesis protein, putative [Hoeflea phototrophica
DFL-43]
gi|162281617|gb|EDQ31911.1| cobalamin synthesis protein, putative [Hoeflea phototrophica
DFL-43]
Length = 403
Score = 34.7 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 12/20 (60%), Positives = 17/20 (85%)
Query: 91 PDNRIPATIITGFLGSGKNT 110
PD R+P T+++GFLG+GK T
Sbjct: 2 PDTRLPVTVLSGFLGAGKTT 21
>gi|146417093|ref|XP_001484516.1| hypothetical protein PGUG_03897 [Meyerozyma guilliermondii ATCC
6260]
Length = 406
Score = 34.7 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 92 DNRIPATIITGFLGSGKNT 110
D +IP TIITG+LGSGK+T
Sbjct: 40 DKKIPITIITGYLGSGKST 58
>gi|334706043|ref|ZP_08521909.1| Cobalamin synthesis protein/P47K family protein [Aeromonas caviae
Ae398]
Length = 372
Score = 34.7 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 92 DNRIPATIITGFLGSGKNT 110
D RIP T++TGFLGSGK T
Sbjct: 3 DTRIPVTLLTGFLGSGKTT 21
>gi|37520103|ref|NP_923480.1| hypothetical protein glr0534 [Gloeobacter violaceus PCC 7421]
gi|35211095|dbj|BAC88475.1| glr0534 [Gloeobacter violaceus PCC 7421]
Length = 449
Score = 34.7 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 13/18 (72%), Positives = 16/18 (88%)
Query: 93 NRIPATIITGFLGSGKNT 110
NR+P T++TGFLGSGK T
Sbjct: 4 NRVPVTVLTGFLGSGKTT 21
>gi|158339981|ref|YP_001521151.1| cobalamin synthesis protein/P47K [Acaryochloris marina MBIC11017]
gi|158310222|gb|ABW31837.1| cobalamin synthesis protein/P47K [Acaryochloris marina MBIC11017]
Length = 367
Score = 34.7 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 69 TASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
T S ++ T+ S D L P +P TIITGFLGSGK T
Sbjct: 2 TNSTASVQTSQSLDIKL-----PKKGMPVTIITGFLGSGKTT 38
>gi|255261617|ref|ZP_05340959.1| CobW/P47K family protein [Thalassiobium sp. R2A62]
gi|255103952|gb|EET46626.1| CobW/P47K family protein [Thalassiobium sp. R2A62]
Length = 403
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 12/20 (60%), Positives = 17/20 (85%)
Query: 91 PDNRIPATIITGFLGSGKNT 110
PD R+P T+++GFLG+GK T
Sbjct: 2 PDTRLPVTVLSGFLGAGKTT 21
>gi|427725272|ref|YP_007072549.1| cobalamin synthesis protein P47K [Leptolyngbya sp. PCC 7376]
gi|427356992|gb|AFY39715.1| cobalamin synthesis protein P47K [Leptolyngbya sp. PCC 7376]
Length = 437
Score = 34.7 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 57 IAFKVPRPYRRFTASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
I+FK+ + S S T +S+ +P TIITGFLGSGK T
Sbjct: 32 ISFKIEKSNLEDIYSESIMVTASSQAPGADATAENQGGLPVTIITGFLGSGKTT 85
>gi|239832635|ref|ZP_04680964.1| cobalamin synthesis protein P47K [Ochrobactrum intermedium LMG
3301]
gi|444309683|ref|ZP_21145315.1| cobalamin synthesis protein P47K [Ochrobactrum intermedium M86]
gi|239824902|gb|EEQ96470.1| cobalamin synthesis protein P47K [Ochrobactrum intermedium LMG
3301]
gi|443486950|gb|ELT49720.1| cobalamin synthesis protein P47K [Ochrobactrum intermedium M86]
Length = 395
Score = 34.7 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 69 TASASAAATTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
T S + A T A ++ T+ RIP T++TG+LGSGK T
Sbjct: 2 TMSQAEAQTEAPSETKTTTEA---GRIPVTVLTGYLGSGKTT 40
>gi|298704937|emb|CBJ28440.1| Cobalamin synthesis protein (ISS) [Ectocarpus siliculosus]
Length = 495
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 92 DNRIPATIITGFLGSGKNT 110
++RIP TI+TGFLGSGK T
Sbjct: 6 ESRIPVTILTGFLGSGKTT 24
>gi|226228237|ref|YP_002762343.1| hypothetical protein GAU_2831 [Gemmatimonas aurantiaca T-27]
gi|226091428|dbj|BAH39873.1| hypothetical protein GAU_2831 [Gemmatimonas aurantiaca T-27]
Length = 408
Score = 34.7 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 12/20 (60%), Positives = 17/20 (85%)
Query: 91 PDNRIPATIITGFLGSGKNT 110
PD R+P T+++GFLG+GK T
Sbjct: 6 PDRRLPVTVLSGFLGAGKTT 25
>gi|327298685|ref|XP_003234036.1| CobW domain-containing protein [Trichophyton rubrum CBS 118892]
gi|326464214|gb|EGD89667.1| CobW domain-containing protein [Trichophyton rubrum CBS 118892]
Length = 388
Score = 34.7 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 78 TASEDSDLLTKIPPDN---RIPATIITGFLGSGKNT 110
TA E + K P D R+P TI+TG+LG+GK T
Sbjct: 18 TAPEQPEEQPKTPTDQSLPRVPITIVTGYLGAGKTT 53
>gi|449017322|dbj|BAM80724.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 446
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 92 DNRIPATIITGFLGSGKNT 110
D RIP +I+TGFLGSGK+T
Sbjct: 85 DQRIPVSILTGFLGSGKST 103
>gi|315041867|ref|XP_003170310.1| COBW domain-containing protein 1 [Arthroderma gypseum CBS 118893]
gi|311345344|gb|EFR04547.1| COBW domain-containing protein 1 [Arthroderma gypseum CBS 118893]
Length = 389
Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 77 TTASEDSDLLTKIPPDN---RIPATIITGFLGSGKNT 110
T E S+ K P D R+P TI+TG+LG+GK T
Sbjct: 18 TATPEKSEEQPKTPTDQNLPRVPITIVTGYLGAGKTT 54
>gi|398834389|ref|ZP_10592143.1| putative GTPase, G3E family [Herbaspirillum sp. YR522]
gi|398220512|gb|EJN06961.1| putative GTPase, G3E family [Herbaspirillum sp. YR522]
Length = 376
Score = 34.7 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 80 SEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
S D L + +PP IP T++TGFLG+GK T
Sbjct: 3 SSDQGLPSALPP---IPVTVVTGFLGAGKTT 30
>gi|90424991|ref|YP_533361.1| cobalamin synthesis protein, P47K [Rhodopseudomonas palustris
BisB18]
gi|90107005|gb|ABD89042.1| cobalamin synthesis protein, P47K [Rhodopseudomonas palustris
BisB18]
Length = 410
Score = 34.7 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 92 DNRIPATIITGFLGSGKNT 110
DNR+P T+++GFLGSGK T
Sbjct: 7 DNRLPVTVLSGFLGSGKTT 25
>gi|448536960|ref|XP_003871239.1| hypothetical protein CORT_0G04370 [Candida orthopsilosis Co 90-125]
gi|380355595|emb|CCG25114.1| hypothetical protein CORT_0G04370 [Candida orthopsilosis]
Length = 374
Score = 34.3 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 77 TTASEDSDLLTKIPPDNRIPATIITGFLGSGKNT 110
TT S T + +IP TIITG+LGSGK+T
Sbjct: 24 TTEPTSSMNSTTVSSTRKIPITIITGYLGSGKST 57
>gi|310642068|ref|YP_003946826.1| prli-interacting factor l [Paenibacillus polymyxa SC2]
gi|386041042|ref|YP_005959996.1| GTP-binding protein yjiA [Paenibacillus polymyxa M1]
gi|309247018|gb|ADO56585.1| PRLI-interacting factor L-like protein [Paenibacillus polymyxa SC2]
gi|343097080|emb|CCC85289.1| uncharacterized GTP-binding protein yjiA [Paenibacillus polymyxa
M1]
Length = 336
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 16/21 (76%)
Query: 90 PPDNRIPATIITGFLGSGKNT 110
D RIP TIITGFLG+GK T
Sbjct: 4 EQDPRIPVTIITGFLGAGKTT 24
>gi|154245284|ref|YP_001416242.1| cobalamin synthesis protein P47K [Xanthobacter autotrophicus Py2]
gi|154159369|gb|ABS66585.1| cobalamin synthesis protein P47K [Xanthobacter autotrophicus Py2]
Length = 407
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 87 TKIPPDNRIPATIITGFLGSGKNT 110
T P D RIP T++TGFLG+GK T
Sbjct: 7 TDPPIDPRIPVTVLTGFLGAGKTT 30
>gi|424916551|ref|ZP_18339915.1| putative GTPase, G3E family [Rhizobium leguminosarum bv. trifolii
WSM597]
gi|392852727|gb|EJB05248.1| putative GTPase, G3E family [Rhizobium leguminosarum bv. trifolii
WSM597]
Length = 391
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 14/19 (73%), Positives = 18/19 (94%)
Query: 92 DNRIPATIITGFLGSGKNT 110
+NRIP TI+TGFLG+GK+T
Sbjct: 5 NNRIPVTILTGFLGAGKST 23
>gi|94971823|ref|YP_593863.1| cobalamin synthesis protein, P47K [Deinococcus geothermalis DSM
11300]
gi|94553874|gb|ABF43789.1| cobalamin synthesis protein, GTPase of G3E family [Deinococcus
geothermalis DSM 11300]
Length = 367
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 14/21 (66%), Positives = 16/21 (76%)
Query: 90 PPDNRIPATIITGFLGSGKNT 110
PP + P TI+TGFLGSGK T
Sbjct: 3 PPTFKTPVTIVTGFLGSGKTT 23
>gi|156395535|ref|XP_001637166.1| predicted protein [Nematostella vectensis]
gi|156224276|gb|EDO45103.1| predicted protein [Nematostella vectensis]
Length = 202
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 14/17 (82%), Positives = 15/17 (88%)
Query: 94 RIPATIITGFLGSGKNT 110
RIP TIITG+LGSGK T
Sbjct: 22 RIPVTIITGYLGSGKTT 38
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.126 0.354
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,634,097,547
Number of Sequences: 23463169
Number of extensions: 55396071
Number of successful extensions: 166127
Number of sequences better than 100.0: 203
Number of HSP's better than 100.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 165938
Number of HSP's gapped (non-prelim): 204
length of query: 113
length of database: 8,064,228,071
effective HSP length: 81
effective length of query: 32
effective length of database: 6,163,711,382
effective search space: 197238764224
effective search space used: 197238764224
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)