BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033699
MRRLAEHSGIPGHIYPLALLCHDIMPPPPQVEREVGEKRVISFHGAGLSVAPEISFADII
TASKNPEEAKEVYTQAFYNSVTEQYNVLKSAIHGQQGLKASIPSVSLSQPWGD

High Scoring Gene Products

Symbol, full name Information P value
ATS1 protein from Arabidopsis thaliana 2.1e-38

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033699
        (113 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2031755 - symbol:ATS1 species:3702 "Arabidopsi...   411  2.1e-38   1


>TAIR|locus:2031755 [details] [associations]
            symbol:ATS1 species:3702 "Arabidopsis thaliana"
            [GO:0004366 "glycerol-3-phosphate O-acyltransferase activity"
            evidence=IEA;IDA] [GO:0008152 "metabolic process" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016746
            "transferase activity, transferring acyl groups" evidence=IEA]
            [GO:0006655 "phosphatidylglycerol biosynthetic process"
            evidence=RCA;IMP] [GO:0009570 "chloroplast stroma" evidence=IDA]
            [GO:0006636 "unsaturated fatty acid biosynthetic process"
            evidence=RCA] [GO:0015995 "chlorophyll biosynthetic process"
            evidence=RCA] [GO:0016117 "carotenoid biosynthetic process"
            evidence=RCA] [GO:0019288 "isopentenyl diphosphate biosynthetic
            process, mevalonate-independent pathway" evidence=RCA] [GO:0009536
            "plastid" evidence=NAS] InterPro:IPR002123 InterPro:IPR016222
            InterPro:IPR023083 Pfam:PF01553 PIRSF:PIRSF000431 SMART:SM00563
            UniPathway:UPA00557 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0009570 GO:GO:0016024 GO:GO:0006655 EMBL:AC084165
            GO:GO:0004366 EMBL:D00673 EMBL:D00672 EMBL:AY093169 EMBL:BT008758
            IPI:IPI00524878 PIR:E86446 PIR:S31083 RefSeq:NP_174499.1
            RefSeq:NP_849738.1 UniGene:At.16836 ProteinModelPortal:Q43307
            SMR:Q43307 STRING:Q43307 PaxDb:Q43307 PRIDE:Q43307 ProMEX:Q43307
            EnsemblPlants:AT1G32200.1 EnsemblPlants:AT1G32200.2 GeneID:840112
            KEGG:ath:AT1G32200 TAIR:At1g32200 eggNOG:NOG05008
            HOGENOM:HOG000264571 InParanoid:Q43307 KO:K00630 OMA:WIAPSGG
            PhylomeDB:Q43307 ProtClustDB:PLN02349
            BioCyc:MetaCyc:AT1G32200-MONOMER Genevestigator:Q43307
            GermOnline:AT1G32200 Gene3D:1.10.1200.50 Uniprot:Q43307
        Length = 459

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 72/111 (64%), Positives = 91/111 (81%)

Query:     1 MRRLAEHSGIPGHIYPLALLCHDIMPPPPQVEREVGEKRVISFHGAGLSVAPEISFADII 60
             MRRL EHSG PGHIYP++LLC+DIMPPPPQVE+E+GEKR++ FHG GLS+APEI+F+D+ 
Sbjct:   348 MRRLVEHSGAPGHIYPMSLLCYDIMPPPPQVEKEIGEKRLVGFHGTGLSIAPEINFSDVT 407

Query:    61 TASKNPEEAKEVYTQAFYNSVTEQYNVLKSAIHGQQGLKASIPSVSLSQPW 111
                ++P EAKE Y+QA Y SV EQY +L SAI  ++G++AS   VSLSQPW
Sbjct:   408 ADCESPNEAKEAYSQALYKSVNEQYEILNSAIKHRRGVEASTSRVSLSQPW 458


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.133   0.393    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      113       113   0.00091  102 3  11 22  0.37    31
                                                     29  0.44    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  557 (59 KB)
  Total size of DFA:  117 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.64u 0.13s 12.77t   Elapsed:  00:00:00
  Total cpu time:  12.64u 0.13s 12.77t   Elapsed:  00:00:00
  Start:  Fri May 10 00:17:34 2013   End:  Fri May 10 00:17:34 2013

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