BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033705
(113 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9AST6|VSP55_ARATH Vacuolar protein sorting-associated protein 55 homolog
OS=Arabidopsis thaliana GN=At1g32410 PE=2 SV=1
Length = 140
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 82/111 (73%), Gaps = 3/111 (2%)
Query: 1 MFSSSILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIDAAKF 60
+ S+ I+LQILACA++NNWWPMLS +MYVL+PMP LFFGG + L + WI+AAKF
Sbjct: 23 LVSTGIVLQILACALFNNWWPMLSVIMYVLLPMPLLFFGGSDSTSLFNESDNSWINAAKF 82
Query: 61 LTGASAVGSLAIPIILRHAHMIETGAMFIEFTSFFIFVCTVM---CFHRAS 108
LTGASAVGS+AIP IL+HA +I GA+ ++ +S+ +F+ ++ C AS
Sbjct: 83 LTGASAVGSVAIPSILKHAGLIGWGALALDLSSYVVFLVAILGYICIGDAS 133
>sp|P47111|VPS55_YEAST Vacuolar protein sorting-associated protein 55 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPS55 PE=1
SV=1
Length = 140
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 7 LLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGG----STQFLTSRDGGGWIDAAKFLT 62
LL IL+CA+++N++P+ L+++L P+P F G ++ F++ G D A FLT
Sbjct: 24 LLVILSCALFHNYYPLFDILIFLLAPIPNTIFNAGNKYHTSDFMSDSSNTGQ-DLAHFLT 82
Query: 63 GASAVGSLAIPIILRHAHMI 82
G +A+P++ H +I
Sbjct: 83 GMLVTSGIALPVVFYHCQLI 102
>sp|Q9UUH1|VPS55_SCHPO Vacuolar protein sorting-associated protein 55
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=vps55 PE=3 SV=2
Length = 128
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 7 LLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGST--QFLTSRDGGGWIDAAKFLTGA 64
+L IL+CA++ NW+P+L + ++L P+P L ST FL D +D +F GA
Sbjct: 19 MLVILSCALFKNWYPLLIVIPFILAPLPNLLTKKYSTSHDFLQEED-RNLLDFGRFTFGA 77
Query: 65 SAVGSLAIPIILRHAHMIETGA 86
+ A+PI+ + +I T A
Sbjct: 78 TICTGFALPIVFVNVGLIGTAA 99
>sp|Q18319|VPS55_CAEEL Vacuolar protein sorting-associated protein 55 homolog
OS=Caenorhabditis elegans GN=C30B5.2 PE=3 SV=3
Length = 132
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 10 ILACAI--YNNWWPMLSALMYVLVPMPCLFFGGGSTQFLTSRDG-GGWIDAAKFLTGASA 66
+L CA+ Y W PM YVL P+P L + +F G I+ A F+T
Sbjct: 22 VLGCALPRYGTWTPMFVITFYVLSPVPLLI----ARRFQEDMTGTNACIELALFITTGIV 77
Query: 67 VGSLAIPIILRHAHMIETGAMFIEFTSFFIFVCTVMCFHRASLEDD 112
+ + A+PI+L HA I A F+ T I T++ + +DD
Sbjct: 78 ISAFALPIVLAHAGTIANSACFLVNTGSVIMFGTIIAYFYLHRDDD 123
>sp|Q5RDE9|LERL1_PONAB Leptin receptor overlapping transcript-like 1 OS=Pongo abelii
GN=LEPROTL1 PE=2 SV=1
Length = 131
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 10/112 (8%)
Query: 6 ILLQILACA--IYNNWWPMLSALMYVLVPMP-CLFFGGGSTQFLTSRDG--GGWIDAAKF 60
++ +L CA IYN +WP+ Y+L P+P C+ + + + D + A F
Sbjct: 18 LMFLMLGCALPIYNKYWPLFVLFFYILSPIPYCI-----ARRLVDDTDAMSNACKELAIF 72
Query: 61 LTGASAVGSLAIPIILRHAHMIETGAMFIEFTSFFIFVCTVMCFHRASLEDD 112
LT V + +PI+ AH+IE GA + T + T++ F +D
Sbjct: 73 LTTGIVVSAFGLPIVFARAHLIEWGACALVLTGNTVIFATILGFFLVFGSND 124
>sp|O95214|LERL1_HUMAN Leptin receptor overlapping transcript-like 1 OS=Homo sapiens
GN=LEPROTL1 PE=2 SV=2
Length = 131
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 10/112 (8%)
Query: 6 ILLQILACA--IYNNWWPMLSALMYVLVPMP-CLFFGGGSTQFLTSRDG--GGWIDAAKF 60
++ +L CA IYN +WP+ Y+L P+P C+ + + + D + A F
Sbjct: 18 LMFLMLGCALPIYNKYWPLFVLFFYILSPIPYCI-----ARRLVDDTDAMSNACKELAIF 72
Query: 61 LTGASAVGSLAIPIILRHAHMIETGAMFIEFTSFFIFVCTVMCFHRASLEDD 112
LT V + +PI+ AH+IE GA + T + T++ F +D
Sbjct: 73 LTTGIVVSAFGLPIVFARAHLIEWGACALVLTGNTVIFATILGFFLVFGSND 124
>sp|Q9CQ74|LERL1_MOUSE Leptin receptor overlapping transcript-like 1 OS=Mus musculus
GN=Leprotl1 PE=2 SV=1
Length = 131
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 10/112 (8%)
Query: 6 ILLQILACA--IYNNWWPMLSALMYVLVPMP-CLFFGGGSTQFLTSRDG--GGWIDAAKF 60
++ +L CA IYN +WP+ Y+L P+P C+ + + + D + A F
Sbjct: 18 LMFLMLGCALPIYNQYWPLFVLFFYILSPIPYCI-----ARRLVDDTDAMSNACKELAIF 72
Query: 61 LTGASAVGSLAIPIILRHAHMIETGAMFIEFTSFFIFVCTVMCFHRASLEDD 112
LT V + +P++ AH+IE GA + T + T++ F +D
Sbjct: 73 LTTGIVVSAFGLPVVFARAHLIEWGACALVLTGNTVIFATILGFFLVFGSND 124
>sp|Q54VP1|VPS55_DICDI Vacuolar protein sorting-associated protein 55 homolog
OS=Dictyostelium discoideum GN=vps55 PE=3 SV=1
Length = 125
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 7/115 (6%)
Query: 2 FSSSILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIDAAKFL 61
F+ +L ILAC + ++ +P++ Y L P P + + S + G + D FL
Sbjct: 12 FAVGLLFNILACIVSHSGYPIIVVASYFLAPFPNILCRNRDS---FSSEKGTFEDIGLFL 68
Query: 62 TGASAVGSLAIPIILRHAHMIETGAMFIEFTSFFIFVCTVMC----FHRASLEDD 112
TG AIP+IL H+ +I A+ T++ F+R + ED+
Sbjct: 69 TGLFITSGFAIPMILAHSDIISGKALAFSMAGGVTVYATIITFLWFFNRHNDEDN 123
>sp|Q32PD8|LERL1_BOVIN Leptin receptor overlapping transcript-like 1 OS=Bos taurus
GN=LEPROTL1 PE=2 SV=1
Length = 131
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 10/112 (8%)
Query: 6 ILLQILACA--IYNNWWPMLSALMYVLVPMP-CLFFGGGSTQFLTSRDG--GGWIDAAKF 60
++ +L CA IYN +WP+ Y+L P+P C+ + + + D + A F
Sbjct: 18 LMFLMLGCALPIYNQYWPLFVLFFYILSPIPYCI-----ARRLVDDTDAMSNACKELAIF 72
Query: 61 LTGASAVGSLAIPIILRHAHMIETGAMFIEFTSFFIFVCTVMCFHRASLEDD 112
LT V + +PI+ A++IE GA + T + T++ F +D
Sbjct: 73 LTTGIVVSAFGLPIVFARANLIEWGACALVLTGNTVIFATILGFFLVFGSND 124
>sp|B3Y064|OBRG_TAKRU Leptin receptor gene-related protein OS=Takifugu rubripes
GN=leprot PE=2 SV=1
Length = 130
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 15/77 (19%)
Query: 16 YNNWWPMLSALMYVLVPMPCLFFGGGSTQFLTSR--DGGGWIDA----AKFLTGASAVGS 69
Y +WP+ + YVL P+P F++ R DGG +A A FLT V S
Sbjct: 30 YGIYWPLFVLIFYVLSPIPT---------FISRRLSDGGSSSNACRELAYFLTTGIVVSS 80
Query: 70 LAIPIILRHAHMIETGA 86
+PI+L I+ GA
Sbjct: 81 FGLPIVLARTATIQWGA 97
>sp|O89013|OBRG_MOUSE Leptin receptor gene-related protein OS=Mus musculus GN=Leprot
PE=1 SV=1
Length = 131
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 2 FSSSILLQ--ILACAI--YNNWWPMLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIDA 57
FS +I L +L CA+ Y +WP+ + YV+ P+P +F + + +
Sbjct: 12 FSGAIGLTFLMLGCALEDYGVYWPLFVLIFYVISPIP--YFIAKRVTYDSDATSSACREL 69
Query: 58 AKFLTGASAVGSLAIPIILRHAHMIETGA 86
A F T V + +P++L +I+ GA
Sbjct: 70 AYFFTTGIVVSAFGLPVVLARVDVIKWGA 98
>sp|Q561T9|OBRG_DANRE Leptin receptor gene-related protein OS=Danio rerio GN=leprot
PE=2 SV=1
Length = 130
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 10 ILACAI--YNNWWPMLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIDAAKFLTGASAV 67
+L CA+ + +WPM + Y+L P+P L + + A FLT V
Sbjct: 22 LLGCALEQFGQYWPMFVLIFYILSPIPNLI---ARRHADDTESSNACRELAYFLTTGIVV 78
Query: 68 GSLAIPIILRHAHMIETGA 86
+ +P++L +I+ GA
Sbjct: 79 SAYGLPVVLARKAVIQWGA 97
>sp|Q9JLS8|OBRG_RAT Leptin receptor gene-related protein OS=Rattus norvegicus
GN=Leprot PE=2 SV=1
Length = 131
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 2 FSSSILLQ--ILACAI--YNNWWPMLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIDA 57
FS +I L +L CA+ Y +WP+ + YV+ P+P +F + + +
Sbjct: 12 FSGAIGLTFLMLGCALEDYGVYWPLFVLIFYVISPIP--YFIAKRVTYDSDATSSACREL 69
Query: 58 AKFLTGASAVGSLAIPIILRHAHMIETGA 86
A F T V + P+IL +I+ GA
Sbjct: 70 AYFFTTGIVVSAFGFPVILARVAVIKWGA 98
>sp|Q5PSV5|OBRG_MELGA Leptin receptor gene-related protein OS=Meleagris gallopavo
GN=LEPROT PE=2 SV=1
Length = 131
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 20/96 (20%)
Query: 2 FSSSILLQ--ILACAI--YNNWWPMLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWI-- 55
FS +I L +L CA+ Y +WPM + Y + P+P F+ R
Sbjct: 12 FSGAIGLTFLMLGCALEYYGVYWPMFVLIFYFICPIP---------HFIARRVSDDSDAA 62
Query: 56 -----DAAKFLTGASAVGSLAIPIILRHAHMIETGA 86
+ A F T V + PIIL I+ GA
Sbjct: 63 SSACRELAYFFTTGIVVSAFGFPIILARVEAIKWGA 98
>sp|Q5ZJD9|OBRG_CHICK Leptin receptor gene-related protein OS=Gallus gallus GN=LEPROT
PE=2 SV=1
Length = 131
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 20/96 (20%)
Query: 2 FSSSILLQ--ILACAI--YNNWWPMLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWI-- 55
FS +I L +L CA+ Y +WPM + Y + P+P F+ R
Sbjct: 12 FSGAIGLTFLMLGCALEYYGVYWPMFVLIFYFICPIP---------HFIARRVSDDSDAA 62
Query: 56 -----DAAKFLTGASAVGSLAIPIILRHAHMIETGA 86
+ A F T V + PIIL I+ GA
Sbjct: 63 SSACRELAYFFTTGIVVSAFGFPIILARVEAIKWGA 98
>sp|B9TRX0|OBRG_PIG Leptin receptor gene-related protein OS=Sus scrofa GN=LEPROT PE=2
SV=1
Length = 131
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 2 FSSSILLQ--ILACAI--YNNWWPMLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIDA 57
FS +I L +L CA+ Y +WP+ + + L P+P F + + +
Sbjct: 12 FSGAIGLTFLMLGCALEDYGVYWPLFVLVFHALSPIP--HFIAKRATYDSDATSSACREL 69
Query: 58 AKFLTGASAVGSLAIPIILRHAHMIETGA 86
A F T V + P+IL +I+ GA
Sbjct: 70 AYFFTTGIVVSAFGFPVILARVAVIKWGA 98
>sp|Q3SYT0|OBRG_BOVIN Leptin receptor gene-related protein OS=Bos taurus GN=LEPROT PE=2
SV=1
Length = 131
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 2 FSSSILLQ--ILACAI--YNNWWPMLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIDA 57
FS +I L +L CA+ Y +WP+ + + + P+P F + + +
Sbjct: 12 FSGAIGLTFLMLGCALEDYGVYWPLFVLIFHAISPIP--HFIAKRATYDSDATSSACREL 69
Query: 58 AKFLTGASAVGSLAIPIILRHAHMIETGA 86
A F T V + P+IL +I+ GA
Sbjct: 70 AYFFTTGIVVSAFGFPVILARVSVIKWGA 98
>sp|O15243|OBRG_HUMAN Leptin receptor gene-related protein OS=Homo sapiens GN=LEPROT
PE=1 SV=1
Length = 131
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 2 FSSSILLQ--ILACAI--YNNWWPMLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIDA 57
FS +I L +L CA+ Y +WP+ + + + P+P F + + +
Sbjct: 12 FSGAIGLTFLMLGCALEDYGVYWPLFVLIFHAISPIP--HFIAKRVTYDSDATSSACREL 69
Query: 58 AKFLTGASAVGSLAIPIILRHAHMIETGA 86
A F T V + P+IL +I+ GA
Sbjct: 70 AYFFTTGIVVSAFGFPVILARVAVIKWGA 98
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.332 0.141 0.478
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,467,973
Number of Sequences: 539616
Number of extensions: 1347268
Number of successful extensions: 2996
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2966
Number of HSP's gapped (non-prelim): 25
length of query: 113
length of database: 191,569,459
effective HSP length: 81
effective length of query: 32
effective length of database: 147,860,563
effective search space: 4731538016
effective search space used: 4731538016
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 55 (25.8 bits)