Query 033705
Match_columns 113
No_of_seqs 104 out of 178
Neff 5.0
Searched_HMMs 46136
Date Fri Mar 29 05:20:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033705.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/033705hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF04133 Vps55: Vacuolar prote 100.0 1.7E-51 3.7E-56 295.8 11.3 112 1-112 7-118 (120)
2 KOG2174 Leptin receptor gene-r 100.0 2.8E-45 6.1E-50 265.4 8.0 111 1-111 13-123 (131)
3 PF04191 PEMT: Phospholipid me 60.4 17 0.00038 23.9 3.9 27 4-30 57-84 (106)
4 PF09991 DUF2232: Predicted me 47.5 1.2E+02 0.0027 23.0 7.4 24 18-41 11-34 (290)
5 PF05915 DUF872: Eukaryotic pr 36.7 42 0.00092 23.9 2.9 31 2-32 51-89 (115)
6 KOG1307 K+-dependent Ca2+/Na+ 35.1 41 0.00088 30.2 3.1 26 6-31 138-170 (588)
7 PF05767 Pox_A14: Poxvirus vir 31.8 76 0.0016 22.2 3.4 31 2-32 15-56 (92)
8 PF09858 DUF2085: Predicted me 30.4 88 0.0019 21.3 3.6 61 4-69 28-88 (93)
9 PRK12670 putative monovalent c 26.1 1.1E+02 0.0023 21.2 3.4 38 3-40 42-86 (99)
10 PHA02898 virion envelope prote 23.6 1.4E+02 0.0031 20.8 3.6 31 2-32 15-56 (92)
11 COG1133 SbmA ABC-type long-cha 23.0 1.5E+02 0.0032 25.5 4.3 24 54-77 127-150 (405)
12 PHA02680 ORF090 IMV phosphoryl 22.7 1.4E+02 0.0029 20.9 3.4 14 2-15 15-28 (91)
13 KOG3788 Predicted divalent cat 22.1 1.4E+02 0.0031 26.1 4.1 23 21-43 220-242 (441)
No 1
>PF04133 Vps55: Vacuolar protein sorting 55 ; InterPro: IPR007262 Vps55 is involved in the secretion of the Golgi form of the soluble vacuolar carboxypeptidase Y, but not the trafficking of the membrane-bound vacuolar alkaline phosphatase. Both Vps55 and obesity receptor gene-related protein are important for functioning membrane trafficking to the vacuole/lysosome of eukaryotic cells [].
Probab=100.00 E-value=1.7e-51 Score=295.76 Aligned_cols=112 Identities=38% Similarity=0.630 Sum_probs=107.7
Q ss_pred CcHHHHHHHHHHHhhccchHHHHHHHHHHhhhhhhhhhcCCCCCCCcccCCchhhhHHHHHHHHHHHHHhHHHHHHHhhh
Q 033705 1 MFSSSILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIDAAKFLTGASAVGSLAIPIILRHAH 80 (113)
Q Consensus 1 ~laiG~lLvILsCAL~~nw~Pl~v~~~y~laPiP~~i~~~~~~~~d~~~~~~~~~d~~~FlTg~~vvSg~aLPiVL~H~~ 80 (113)
++|+|++|+|||||||||||||+++++|+++|+|++++||+++++|+++|+++++|+++|+||++||||+|||+||||++
T Consensus 7 ~~aiG~lL~IL~CAL~~nw~PL~v~~~y~laPiP~~i~~~~~~~~~~~~~~~~~~d~~~FlT~~~vvSg~aLP~VL~H~~ 86 (120)
T PF04133_consen 7 FLAIGFLLVILSCALYKNWWPLFVVLFYVLAPIPNLIARRYSSDDDFSSDSGSCQDFGKFLTGFLVVSGFALPIVLAHAG 86 (120)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhhhHHHHCCCCCCcccccCcchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 37899999999999999999999999999999999999999999999888777999999999999999999999999999
Q ss_pred cchhhHHHHHhhhhhhhhhhhhhhhhcccCCC
Q 033705 81 MIETGAMFIEFTSFFIFVCTVMCFHRASLEDD 112 (113)
Q Consensus 81 iI~~~A~~lsl~g~~ii~~Ti~~f~~~f~~~d 112 (113)
+|+|+||+|+++||+++|+||++|+++|+|||
T Consensus 87 ~I~~~A~~l~l~g~~ii~~ti~~f~~~f~~~d 118 (120)
T PF04133_consen 87 IIQWGACGLSLAGGVIIYATIIGFFWFFGEED 118 (120)
T ss_pred hhHHHHHHHHHHhhHHHHHHHHHHHhhccCcC
Confidence 99999999999999999999999999998555
No 2
>KOG2174 consensus Leptin receptor gene-related protein [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-45 Score=265.39 Aligned_cols=111 Identities=40% Similarity=0.645 Sum_probs=101.2
Q ss_pred CcHHHHHHHHHHHhhccchHHHHHHHHHHhhhhhhhhhcCCCCCCCcccCCchhhhHHHHHHHHHHHHHhHHHHHHHhhh
Q 033705 1 MFSSSILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIDAAKFLTGASAVGSLAIPIILRHAH 80 (113)
Q Consensus 1 ~laiG~lLvILsCAL~~nw~Pl~v~~~y~laPiP~~i~~~~~~~~d~~~~~~~~~d~~~FlTg~~vvSg~aLPiVL~H~~ 80 (113)
++|+|++|+||||||++|||||+++++|+++|+||++++..+..+|+.+++++|+|+++|+||++||||+|||+||+|++
T Consensus 13 ~~a~G~~l~iL~CAL~~nwwPlf~~~~yvl~PiP~l~f~a~~~~~d~~~~~~~~idlA~FlTg~~vvs~falPiVl~ha~ 92 (131)
T KOG2174|consen 13 AGAVGLLLLILGCALFRNWWPLFVILFYVLSPIPNLLFIAGRTQHDFDATSDACIDLAKFLTGAIVVSAFALPIVLAHAG 92 (131)
T ss_pred HHHHHHHHHHHHhhhccchHHHHHHHHHHhcCCchHHhccccceecccccccHHHHHHHHHhcchhhhhhhhHHHHHHhh
Confidence 36899999999999999999999999999999998888555544555555669999999999999999999999999999
Q ss_pred cchhhHHHHHhhhhhhhhhhhhhhhhcccCC
Q 033705 81 MIETGAMFIEFTSFFIFVCTVMCFHRASLED 111 (113)
Q Consensus 81 iI~~~A~~lsl~g~~ii~~Ti~~f~~~f~~~ 111 (113)
+|+|+||.|++.||.++|++|+.|++.|++|
T Consensus 93 lI~~gAc~l~~tg~~iIF~~ii~~f~~f~~~ 123 (131)
T KOG2174|consen 93 LIGWGACALVLTGNSIIFLVIILFFLIFGGD 123 (131)
T ss_pred HhhhhhhhhhhcCCchhHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999733
No 3
>PF04191 PEMT: Phospholipid methyltransferase ; InterPro: IPR007318 The Saccharomyces cerevisiae (Baker's yeast) phospholipid methyltransferase (2.1.1.16 from EC) has a broad substrate specificity of unsaturated phospholipids [].; GO: 0008170 N-methyltransferase activity, 0006644 phospholipid metabolic process
Probab=60.44 E-value=17 Score=23.88 Aligned_cols=27 Identities=30% Similarity=0.539 Sum_probs=20.7
Q ss_pred HHHHHHHHHHhh-ccchHHHHHHHHHHh
Q 033705 4 SSILLQILACAI-YNNWWPMLSALMYVL 30 (113)
Q Consensus 4 iG~lLvILsCAL-~~nw~Pl~v~~~y~l 30 (113)
.|.++..+++++ .+|++.++..+...+
T Consensus 57 ~g~~l~~~G~~l~~~s~~~l~~~~~~~~ 84 (106)
T PF04191_consen 57 LGFLLILLGIALMLGSWLGLLLAVLAFL 84 (106)
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 588999999999 788887666654443
No 4
>PF09991 DUF2232: Predicted membrane protein (DUF2232); InterPro: IPR018710 This family of bacterial and eukaryotic proteins has no known fucntion; however this signature belongs to a Pfam Gx transporter clan.
Probab=47.50 E-value=1.2e+02 Score=22.98 Aligned_cols=24 Identities=25% Similarity=0.495 Sum_probs=20.9
Q ss_pred chHHHHHHHHHHhhhhhhhhhcCC
Q 033705 18 NWWPMLSALMYVLVPMPCLFFGGG 41 (113)
Q Consensus 18 nw~Pl~v~~~y~laPiP~~i~~~~ 41 (113)
.+.|.+..+..++.|+|..+....
T Consensus 11 ~~~p~l~~~~~~l~plP~~i~~~r 34 (290)
T PF09991_consen 11 VYLPPLGFILAFLMPLPIAIVGLR 34 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 679999999999999999997443
No 5
>PF05915 DUF872: Eukaryotic protein of unknown function (DUF872); InterPro: IPR008590 This entry represents several uncharacterised eukaryotic transmembrane proteins. The function of this currently unknown.
Probab=36.74 E-value=42 Score=23.87 Aligned_cols=31 Identities=16% Similarity=0.444 Sum_probs=20.6
Q ss_pred cHHHHHHHHHHHhhc--------cchHHHHHHHHHHhhh
Q 033705 2 FSSSILLQILACAIY--------NNWWPMLSALMYVLVP 32 (113)
Q Consensus 2 laiG~lLvILsCAL~--------~nw~Pl~v~~~y~laP 32 (113)
+.+|.+|++++|.++ ..-||++++=+-++-|
T Consensus 51 li~G~~li~~g~l~~~~~i~~~~~~~~~llilG~L~fIP 89 (115)
T PF05915_consen 51 LIFGTVLIIIGLLLFFGHIDGDRDRGWALLILGILCFIP 89 (115)
T ss_pred HHHHHHHHHHHHHHHhcccCCCCcccchHHHHHHHHHhc
Confidence 567778888887762 2357887776655544
No 6
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=35.07 E-value=41 Score=30.21 Aligned_cols=26 Identities=35% Similarity=0.995 Sum_probs=18.2
Q ss_pred HHHHHHHHhhcc------chHHHH-HHHHHHhh
Q 033705 6 ILLQILACAIYN------NWWPML-SALMYVLV 31 (113)
Q Consensus 6 ~lLvILsCAL~~------nw~Pl~-v~~~y~la 31 (113)
+|.+|-=|+|+. .||||| +..+|.++
T Consensus 138 IL~Vig~C~LFSrqvl~LtWWPLfRD~sfY~ls 170 (588)
T KOG1307|consen 138 ILCVIGVCGLFSRQVLNLTWWPLFRDVSFYTLS 170 (588)
T ss_pred HHHHHHHHHhhcccccccccchhhhhhHHHHHH
Confidence 577888899955 699987 34444443
No 7
>PF05767 Pox_A14: Poxvirus virion envelope protein A14; InterPro: IPR008785 This family consists of several Poxvirus virion envelope protein A14-like sequences. A14 is a component of the virion membrane and has been found to be an H1 phosphatase substrate in vivo and in vitro. A14 is hyperphosphorylated on serine residues in the absence of H1 expression [].; GO: 0019031 viral envelope
Probab=31.79 E-value=76 Score=22.18 Aligned_cols=31 Identities=32% Similarity=0.565 Sum_probs=22.0
Q ss_pred cHHHHHHHHHHHhh-----ccc------hHHHHHHHHHHhhh
Q 033705 2 FSSSILLQILACAI-----YNN------WWPMLSALMYVLVP 32 (113)
Q Consensus 2 laiG~lLvILsCAL-----~~n------w~Pl~v~~~y~laP 32 (113)
+..|++|+++||-. +|| -|--+.++-|++.-
T Consensus 15 li~GiiLL~~aCIfAfidfsK~~~~~~~~wRalSii~FI~gi 56 (92)
T PF05767_consen 15 LIGGIILLIAACIFAFIDFSKNTKPTDYTWRALSIICFILGI 56 (92)
T ss_pred HHHHHHHHHHHHHHHhhhhccCCCCchhHHHHHHHHHHHHHH
Confidence 56899999999977 443 46666666666643
No 8
>PF09858 DUF2085: Predicted membrane protein (DUF2085); InterPro: IPR019206 This entry, found in various hypothetical prokaryotic proteins, has no known function.
Probab=30.36 E-value=88 Score=21.34 Aligned_cols=61 Identities=16% Similarity=0.087 Sum_probs=34.1
Q ss_pred HHHHHHHHHHhhccchHHHHHHHHHHhhhhhhhhhcCCCCCCCcccCCchhhhHHHHHHHHHHHHH
Q 033705 4 SSILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIDAAKFLTGASAVGS 69 (113)
Q Consensus 4 iG~lLvILsCAL~~nw~Pl~v~~~y~laPiP~~i~~~~~~~~d~~~~~~~~~d~~~FlTg~~vvSg 69 (113)
+|.++..+-+.+.+.+++.......++.-+|..+-+..+.-. .. |+ .+.-+++||.+.=.|
T Consensus 28 ~G~~~~~~~~~~~r~~~~~~~~~~~~l~~lpm~iDg~~q~~~-~~-es---~N~lR~iTG~l~G~~ 88 (93)
T PF09858_consen 28 LGLLIGLLLFYLGRIRLPPLSIWLALLLLLPMAIDGFTQLFG-WR-ES---NNLLRLITGLLFGLG 88 (93)
T ss_pred HHHHHHHHHHHHhhcccccchHHHHHHHHHHHHHHHHHHhce-ec-cC---CChhHHHhhHHHHhH
Confidence 466666666666555555555666666667777654433211 11 11 134789999875433
No 9
>PRK12670 putative monovalent cation/H+ antiporter subunit G; Reviewed
Probab=26.13 E-value=1.1e+02 Score=21.20 Aligned_cols=38 Identities=13% Similarity=0.177 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHhhccchHH------HHHHHHHHhhhh-hhhhhcC
Q 033705 3 SSSILLQILACAIYNNWWP------MLSALMYVLVPM-PCLFFGG 40 (113)
Q Consensus 3 aiG~lLvILsCAL~~nw~P------l~v~~~y~laPi-P~~i~~~ 40 (113)
++|..+++++.++++.+.. +..++.++-+|+ -..++|.
T Consensus 42 TlG~~lil~g~~l~~~~~~~~~k~lli~~f~~lT~Pvaah~iarA 86 (99)
T PRK12670 42 SLGAALILIGLAMQCGFSVFTVKVLLLICLLWITSTTASYALARS 86 (99)
T ss_pred hhhHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999988664432 223344555777 4455544
No 10
>PHA02898 virion envelope protein; Provisional
Probab=23.60 E-value=1.4e+02 Score=20.80 Aligned_cols=31 Identities=23% Similarity=0.370 Sum_probs=22.0
Q ss_pred cHHHHHHHHHHHhh-----ccc------hHHHHHHHHHHhhh
Q 033705 2 FSSSILLQILACAI-----YNN------WWPMLSALMYVLVP 32 (113)
Q Consensus 2 laiG~lLvILsCAL-----~~n------w~Pl~v~~~y~laP 32 (113)
+..|+.|+++||-. .|| -|--+.++-|++.-
T Consensus 15 li~GIiLL~~ACIfAfidfSK~~~~~~~~wRalSii~FIlgi 56 (92)
T PHA02898 15 VAFGIILLIVACICAYIELSKSEKPADSALRSISIISFILAI 56 (92)
T ss_pred HHHHHHHHHHHHHHheehhhcCCCcchhHHHHHHHHHHHHHH
Confidence 67899999999976 222 46666777777653
No 11
>COG1133 SbmA ABC-type long-chain fatty acid transport system, fused permease and ATPase components [Lipid metabolism]
Probab=23.03 E-value=1.5e+02 Score=25.50 Aligned_cols=24 Identities=13% Similarity=0.167 Sum_probs=20.4
Q ss_pred hhhHHHHHHHHHHHHHhHHHHHHH
Q 033705 54 WIDAAKFLTGASAVGSLAIPIILR 77 (113)
Q Consensus 54 ~~d~~~FlTg~~vvSg~aLPiVL~ 77 (113)
..+.+.|.++..+-+|+|+|.|.-
T Consensus 127 ~~t~~~fY~~~~vF~~IA~~~v~i 150 (405)
T COG1133 127 KVTAGQFYSLVGVFLGIALIAVVI 150 (405)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHH
Confidence 356788999999999999998753
No 12
>PHA02680 ORF090 IMV phosphorylated membrane protein; Provisional
Probab=22.74 E-value=1.4e+02 Score=20.87 Aligned_cols=14 Identities=29% Similarity=0.558 Sum_probs=11.5
Q ss_pred cHHHHHHHHHHHhh
Q 033705 2 FSSSILLQILACAI 15 (113)
Q Consensus 2 laiG~lLvILsCAL 15 (113)
+..|+.|+++||-.
T Consensus 15 li~GIiLL~~ACIF 28 (91)
T PHA02680 15 LICGVLLLTAACVF 28 (91)
T ss_pred HHHHHHHHHHHHHH
Confidence 56789999999965
No 13
>KOG3788 consensus Predicted divalent cation transporter [Inorganic ion transport and metabolism]
Probab=22.12 E-value=1.4e+02 Score=26.14 Aligned_cols=23 Identities=9% Similarity=0.218 Sum_probs=19.5
Q ss_pred HHHHHHHHHhhhhhhhhhcCCCC
Q 033705 21 PMLSALMYVLVPMPCLFFGGGST 43 (113)
Q Consensus 21 Pl~v~~~y~laPiP~~i~~~~~~ 43 (113)
|+.++.++.+.|++.+||++..+
T Consensus 220 ~~v~~~flal~pvwi~ia~~~~~ 242 (441)
T KOG3788|consen 220 VLVVVFFLALLPVWIMIAAEDEG 242 (441)
T ss_pred HHHHHHHHHHhHHHHhhhccCch
Confidence 77788888999999999988653
Done!