Query 033710
Match_columns 113
No_of_seqs 134 out of 1068
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 08:38:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033710.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033710hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fo3_A Ubiquitin-conjugating e 100.0 1.8E-45 6.2E-50 237.8 12.2 110 4-113 5-115 (125)
2 2h2y_A Ubiquitin-conjugating e 100.0 1.4E-44 4.8E-49 236.6 13.5 110 4-113 19-129 (136)
3 2a7l_A Hypothetical ubiquitin- 100.0 4.5E-45 1.6E-49 238.8 11.0 107 7-113 24-134 (136)
4 1ayz_A UBC2, ubiquitin-conjuga 100.0 1.3E-44 4.4E-49 244.3 12.0 112 1-113 1-112 (169)
5 3rz3_A Ubiquitin-conjugating e 100.0 2.5E-44 8.6E-49 245.6 13.1 113 1-113 3-129 (183)
6 4gpr_A Ubiquitin-conjugating e 100.0 2.8E-44 9.5E-49 238.9 12.6 112 2-113 1-112 (151)
7 2e2c_A Ubiquitin conjugating e 100.0 4.5E-44 1.5E-48 239.0 13.0 110 4-113 8-117 (156)
8 2ucz_A UBC7, ubiquitin conjuga 100.0 3.5E-44 1.2E-48 241.4 12.4 112 1-113 1-126 (165)
9 2ayv_A Ubiquitin-conjugating e 100.0 5.9E-44 2E-48 240.5 13.5 110 4-113 20-129 (166)
10 2aak_A UBC1, ubiquitin conjuga 100.0 4E-44 1.4E-48 238.3 12.1 112 1-113 1-112 (152)
11 2c2v_B Ubiquitin-conjugating e 100.0 2.9E-44 9.8E-49 239.5 11.2 109 5-113 5-113 (154)
12 1z2u_A Ubiquitin-conjugating e 100.0 5.2E-44 1.8E-48 237.3 12.1 111 3-113 2-112 (150)
13 2c4o_A Ubiquitin-conjugating e 100.0 9.5E-44 3.3E-48 239.3 12.9 110 4-113 18-127 (165)
14 2r0j_A Ubiquitin carrier prote 100.0 4.9E-44 1.7E-48 237.2 11.4 108 6-113 2-109 (149)
15 1jat_A Ubiquitin-conjugating e 100.0 5.3E-44 1.8E-48 238.4 11.3 111 3-113 3-113 (155)
16 1zdn_A Ubiquitin-conjugating e 100.0 6.1E-44 2.1E-48 238.8 11.6 109 5-113 13-121 (158)
17 1yh2_A HSPC150 protein similar 100.0 1.4E-43 4.8E-48 239.3 12.8 111 3-113 2-116 (169)
18 3h8k_A Ubiquitin-conjugating e 100.0 2.7E-43 9.3E-48 236.9 13.2 110 4-113 2-125 (164)
19 1i7k_A Ubiquitin-conjugating e 100.0 1.1E-43 3.7E-48 241.5 11.0 111 3-113 28-138 (179)
20 2awf_A Ubiquitin-conjugating e 100.0 5.4E-43 1.9E-47 237.0 13.5 112 2-113 14-139 (172)
21 1fxt_A Ubiquitin-conjugating e 100.0 1.9E-43 6.5E-48 234.4 10.1 108 6-113 2-111 (149)
22 2bep_A Ubiquitin-conjugating e 100.0 6.8E-43 2.3E-47 233.9 12.6 113 1-113 3-120 (159)
23 1yrv_A Ubiquitin-conjugating l 100.0 1.6E-43 5.4E-48 239.0 9.4 112 1-113 20-134 (169)
24 3rcz_B SUMO-conjugating enzyme 100.0 4.3E-43 1.5E-47 235.7 11.1 111 3-113 8-125 (163)
25 2f4z_A Tgtwinscan_2721 - E2 do 100.0 9E-43 3.1E-47 239.4 11.7 110 4-113 31-154 (193)
26 3bzh_A Ubiquitin-conjugating e 100.0 1.7E-42 6E-47 238.2 13.0 109 5-113 48-156 (194)
27 2gjd_A Ubiquitin-conjugating e 100.0 7.4E-43 2.5E-47 233.3 10.6 112 1-113 1-119 (157)
28 2pwq_A Ubiquitin conjugating e 100.0 1E-42 3.5E-47 242.6 10.7 110 4-113 22-132 (216)
29 3k9o_A Ubiquitin-conjugating e 100.0 3.4E-42 1.2E-46 238.1 12.7 112 1-113 2-117 (201)
30 1jat_B Ubiquitin-conjugating e 100.0 4.8E-42 1.6E-46 225.1 11.3 112 1-113 2-120 (138)
31 2grr_A Ubiquitin-conjugating e 100.0 3.6E-42 1.2E-46 230.8 10.3 109 5-113 7-122 (161)
32 2a4d_A Ubiquitin-conjugating e 100.0 9.6E-42 3.3E-46 228.3 12.1 110 4-113 24-140 (160)
33 1wzv_A Ubiquitin-conjugating e 100.0 6.7E-42 2.3E-46 228.2 11.2 108 5-113 4-113 (155)
34 1y8x_A Ubiquitin-conjugating e 100.0 2.4E-41 8.4E-46 226.6 11.4 107 4-113 5-112 (160)
35 2q0v_A Ubiquitin-conjugating e 100.0 3.8E-41 1.3E-45 224.7 11.8 110 3-113 19-135 (156)
36 2y9m_A Ubiquitin-conjugating e 100.0 4.9E-41 1.7E-45 227.4 12.5 113 1-113 1-129 (172)
37 3fn1_B NEDD8-conjugating enzym 100.0 5.7E-41 2E-45 226.1 12.5 109 4-113 13-128 (167)
38 1tte_A Ubiquitin-conjugating e 100.0 4.5E-42 1.5E-46 239.3 7.1 109 5-113 2-112 (215)
39 2nvu_C NEDD8-conjugating enzym 100.0 3.9E-41 1.3E-45 229.3 10.9 107 4-113 25-132 (180)
40 3e46_A Ubiquitin-conjugating e 100.0 5.2E-41 1.8E-45 238.6 11.4 109 5-113 57-169 (253)
41 2hlw_A Ubiquitin-conjugating e 100.0 3.9E-41 1.3E-45 227.4 9.7 110 4-113 34-150 (170)
42 1c4z_D UBCH7, ubiquitin conjug 100.0 8.8E-41 3E-45 222.6 8.8 107 6-113 3-111 (154)
43 4ds2_A Ubiquitin-conjugating e 100.0 1.6E-40 5.6E-45 223.9 9.2 108 1-109 5-126 (167)
44 2onu_A Ubiquitin-conjugating e 100.0 3.9E-41 1.3E-45 223.9 5.0 106 5-113 2-109 (152)
45 2z5d_A Ubiquitin-conjugating e 100.0 8.2E-41 2.8E-45 227.3 6.3 109 1-113 20-131 (179)
46 2f4w_A Ubiquitin-conjugating e 100.0 1.1E-39 3.7E-44 223.3 11.4 108 4-113 13-123 (187)
47 1yf9_A Ubiquitin carrier prote 100.0 4.7E-40 1.6E-44 222.3 7.8 105 5-113 12-118 (171)
48 3o2u_A NEDD8-conjugating enzym 100.0 2.1E-39 7.1E-44 222.3 10.8 107 4-113 28-141 (190)
49 1zuo_A Hypothetical protein LO 100.0 3.7E-40 1.3E-44 225.4 6.7 111 3-113 25-152 (186)
50 4ddg_A Ubiquitin-conjugating e 100.0 2.1E-39 7.3E-44 243.2 11.3 109 5-113 3-111 (399)
51 3ceg_A Baculoviral IAP repeat- 100.0 3E-38 1E-42 230.2 11.7 111 3-113 74-201 (323)
52 2z6o_A UFM1-conjugating enzyme 100.0 4.6E-32 1.6E-36 180.2 1.5 96 7-108 34-144 (172)
53 3kpa_A Probable ubiquitin fold 99.8 8E-23 2.7E-27 133.4 -0.0 96 6-107 35-145 (168)
54 3r3q_A Suppressor protein STP2 99.8 5.5E-20 1.9E-24 122.7 8.8 106 7-113 30-153 (162)
55 3obq_A Tumor susceptibility ge 99.6 1.1E-15 3.9E-20 100.3 6.2 98 9-112 24-134 (146)
56 2ebm_A RWD domain-containing p 97.2 0.0045 1.5E-07 38.8 8.8 68 6-75 11-78 (128)
57 2yz0_A Serine/threonine-protei 96.9 0.013 4.6E-07 37.1 9.5 67 8-75 13-85 (138)
58 2day_A Ring finger protein 25; 96.9 0.0078 2.7E-07 37.7 8.2 70 6-75 9-82 (128)
59 3zqs_A E3 ubiquitin-protein li 96.0 0.076 2.6E-06 35.7 8.9 79 8-111 4-83 (186)
60 1ukx_A GCN2, GCN2 EIF2alpha ki 95.5 0.14 4.9E-06 32.1 8.5 69 6-75 11-86 (137)
61 2ebk_A RWD domain-containing p 94.2 0.092 3.1E-06 32.7 4.9 67 8-75 10-79 (128)
62 2daw_A RWD domain containing p 92.6 0.11 3.8E-06 33.6 3.4 24 53-76 76-99 (154)
63 2dax_A Protein C21ORF6; RWD do 92.2 0.093 3.2E-06 33.7 2.7 25 52-76 73-97 (152)
64 3u3c_B Paxillin LD2 peptide; 4 91.1 0.16 5.5E-06 22.4 2.0 24 2-25 2-25 (26)
65 2bum_A Protocatechuate 3,4-dio 47.5 20 0.00069 24.2 3.6 26 49-74 108-138 (209)
66 3rls_A YAF9, protein AF-9 homo 45.6 62 0.0021 21.3 6.4 44 31-76 29-72 (175)
67 2c5k_P Vacuolar protein sortin 44.2 11 0.00037 16.9 1.2 14 7-20 12-25 (26)
68 2rf4_B DNA-directed RNA polyme 38.2 15 0.0005 21.4 1.5 13 5-17 62-74 (87)
69 1m46_B IQ4, IQ4 motif from MYO 37.8 23 0.00077 15.4 1.7 12 6-17 9-20 (26)
70 3g9r_A Fusion complex of HIV-1 37.8 23 0.00079 17.4 1.9 15 5-19 28-42 (42)
71 3pft_A Flavin reductase; desul 35.9 18 0.00062 22.9 1.8 30 66-95 42-74 (157)
72 2cu9_A Spcia1, histone chapero 35.4 54 0.0018 21.3 4.0 38 33-70 36-86 (161)
73 2bum_B Protocatechuate 3,4-dio 30.7 33 0.0011 23.7 2.5 25 50-74 134-165 (241)
74 3t63_M 3,4-PCD, protocatechuat 29.3 36 0.0012 23.5 2.5 25 50-74 133-164 (238)
75 2xsu_A Catechol 1,2 dioxygenas 29.1 35 0.0012 24.6 2.5 25 50-74 187-229 (312)
76 3kxt_A Chromatin protein CREN7 28.8 70 0.0024 16.9 3.5 11 56-66 46-56 (56)
77 1tmx_A Hydroxyquinol 1,2-dioxy 28.2 37 0.0013 24.2 2.5 25 50-74 183-225 (293)
78 3qrl_A Transcription initiatio 28.1 1.2E+02 0.004 19.2 6.0 43 34-78 32-77 (140)
79 2azq_A Catechol 1,2-dioxygenas 27.9 37 0.0013 24.4 2.5 25 50-74 183-225 (311)
80 3t63_A 3,4-PCD, protocatechuat 26.9 44 0.0015 22.3 2.6 23 52-74 102-129 (200)
81 3n9t_A PNPC; phospholipid bind 26.8 41 0.0014 23.9 2.5 25 50-74 180-222 (290)
82 2boy_A 3-chlorocatechol 1,2-di 26.7 42 0.0014 23.4 2.5 25 50-74 153-195 (254)
83 2ecu_A Flavin reductase (HPAC) 26.6 16 0.00054 22.9 0.3 31 66-96 40-73 (149)
84 2ccv_A Helix pomatia agglutini 26.3 88 0.003 18.3 3.6 24 51-75 28-51 (101)
85 1dmh_A 1,2-CTD, catechol 1,2-d 25.5 45 0.0015 24.0 2.5 25 50-74 186-228 (311)
86 1roc_A Anti-silencing protein 25.5 99 0.0034 19.9 3.9 30 33-62 37-79 (155)
87 1u9d_A Hypothetical protein VC 24.7 1.2E+02 0.0042 18.5 4.1 28 6-33 32-59 (122)
88 3hhy_A 1,2-CTD, catechol 1,2-d 23.7 45 0.0015 23.6 2.2 24 51-74 183-224 (280)
89 4hx6_A Oxidoreductase; structu 23.6 22 0.00075 23.2 0.6 31 66-96 57-90 (185)
90 3th1_A Chlorocatechol 1,2-diox 23.5 80 0.0027 22.0 3.4 25 50-74 150-192 (260)
91 3k1l_B Fancl; UBC, ring, RWD, 22.6 1.3E+02 0.0045 22.2 4.6 45 15-66 8-52 (381)
92 2k6w_A Putative uncharacterize 22.2 99 0.0034 18.7 3.4 26 37-62 82-107 (120)
93 2r0x_A Possible flavin reducta 22.2 19 0.00064 22.7 -0.0 30 67-96 44-76 (158)
94 2qck_A Flavin reductase domain 21.5 23 0.00079 22.6 0.4 30 66-95 48-80 (167)
95 4g2e_A Peroxiredoxin; redox pr 21.2 67 0.0023 19.6 2.5 32 82-113 125-156 (157)
96 2hue_A Anti-silencing protein 21.1 1.5E+02 0.0051 19.5 4.2 30 33-62 42-84 (175)
97 2d37_A Hypothetical NADH-depen 21.1 36 0.0012 21.9 1.2 30 65-94 59-91 (176)
No 1
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=1.8e-45 Score=237.84 Aligned_cols=110 Identities=31% Similarity=0.588 Sum_probs=103.6
Q ss_pred CchHHHHHHHHHHHhcCCCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccC-cccee
Q 033710 4 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI-YHPNI 82 (113)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i-~HPnv 82 (113)
+++.+||++|++++++++++|+++.++++|+++|+++|.||++|+||||.|+++|.||++||++||+|+|.|++ |||||
T Consensus 5 ~~a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv 84 (125)
T 2fo3_A 5 GNANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHV 84 (125)
T ss_dssp ----CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcC
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999996 99999
Q ss_pred eCCCcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 83 DKLGRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 83 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
+.+|.||+++|.++|+|++++++||++|++|
T Consensus 85 ~~~G~iCl~iL~~~W~P~~~i~~vl~si~~l 115 (125)
T 2fo3_A 85 YSNGDICLSLLGDDYNPSLSISGLVLSIISM 115 (125)
T ss_dssp CTTSBBCCGGGTTTCCTTCCHHHHHHHHHHH
T ss_pred CCCCEEEchhcCCCCCCCCcHHHHHHHHHHH
Confidence 9999999999999999999999999999875
No 2
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.4e-44 Score=236.65 Aligned_cols=110 Identities=30% Similarity=0.576 Sum_probs=106.2
Q ss_pred CchHHHHHHHHHHHhcCCCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccC-cccee
Q 033710 4 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI-YHPNI 82 (113)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i-~HPnv 82 (113)
.++.+||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ |||||
T Consensus 19 ~~~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv 98 (136)
T 2h2y_A 19 GNANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHV 98 (136)
T ss_dssp TSHHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTB
T ss_pred hHHHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999996 99999
Q ss_pred eCCCcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 83 DKLGRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 83 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
+.+|.||+++|.++|+|++++++||++|++|
T Consensus 99 ~~~G~ICl~iL~~~WsP~~ti~~vL~si~sl 129 (136)
T 2h2y_A 99 YSNGDICLSVLGDDYNPSLSISGLILSIISM 129 (136)
T ss_dssp CTTCCBCCGGGTTTCCTTCCHHHHHHHHHHH
T ss_pred CCCCEEECccccCCCCCCCcHHHHHHHHHHH
Confidence 9999999999999999999999999999875
No 3
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.5e-45 Score=238.85 Aligned_cols=107 Identities=32% Similarity=0.643 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHhcCCCCCeEEE--eCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCc--ccee
Q 033710 7 PRRIIKETQRLLSEPAPGISAS--PSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIY--HPNI 82 (113)
Q Consensus 7 ~~RL~~E~~~l~~~~~~gi~~~--~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~--HPnv 82 (113)
.+||+||++++++++++|+++. ++++|+++|+++|.||++||||||.|+++|.||++||++||+|+|.|++| ||||
T Consensus 24 ~~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV 103 (136)
T 2a7l_A 24 QKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHV 103 (136)
T ss_dssp CHHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTB
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCccC
Confidence 4999999999999999999965 88999999999999999999999999999999999999999999999998 9999
Q ss_pred eCCCcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 83 DKLGRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 83 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
+.+|.||+++|.++|+|++++++||++|++|
T Consensus 104 ~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sl 134 (136)
T 2a7l_A 104 YSNGHICLSILTEDWSPALSVQSVCLSIISM 134 (136)
T ss_dssp CTTCBBCCGGGTTTCCTTSCHHHHHHHHHHH
T ss_pred CCCCeEEchhcCCCCCCCCcHHHHHHHHHHH
Confidence 9999999999999999999999999999975
No 4
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-44 Score=244.30 Aligned_cols=112 Identities=41% Similarity=0.871 Sum_probs=107.0
Q ss_pred CCCCchHHHHHHHHHHHhcCCCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCccc
Q 033710 1 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHP 80 (113)
Q Consensus 1 ma~~~~~~RL~~E~~~l~~~~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HP 80 (113)
||+ .+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 1 Ms~-~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HP 79 (169)
T 1ayz_A 1 MST-PARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHP 79 (169)
T ss_dssp -CC-HHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred CCh-HHHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccC
Confidence 665 5679999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 81 NIDKLGRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 81 nv~~~G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
||+.+|.||+++|.++|+|+++|++||++|++|
T Consensus 80 NI~~~G~ICl~iL~~~WsP~~~i~~vL~si~~l 112 (169)
T 1ayz_A 80 NVYANGEICLDILQNRWTPTYDVASILTSIQSL 112 (169)
T ss_dssp TBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHH
T ss_pred CCCCCCeEeehhhccCCCCcCcHHHHHHHHHHH
Confidence 999999999999999999999999999999875
No 5
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=2.5e-44 Score=245.63 Aligned_cols=113 Identities=37% Similarity=0.778 Sum_probs=106.9
Q ss_pred CCCCchHHHHHHHHHHHhcCCCCCeEEE-eCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCcc
Q 033710 1 MANSNLPRRIIKETQRLLSEPAPGISAS-PSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYH 79 (113)
Q Consensus 1 ma~~~~~~RL~~E~~~l~~~~~~gi~~~-~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~H 79 (113)
||+.++.|||++|+++|++++++|+++. ++++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++||
T Consensus 3 m~~~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 82 (183)
T 3rz3_A 3 MGSPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWH 82 (183)
T ss_dssp --CCHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCC
T ss_pred CcchHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCcc
Confidence 8889999999999999999999999999 678899999999999999999999999999999999999999999999999
Q ss_pred ceeeCCCcEEcccCC-------------CCCCccccHHHHHHHhhcC
Q 033710 80 PNIDKLGRICLDILK-------------DKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 80 Pnv~~~G~icl~~l~-------------~~W~p~~~i~~il~~i~~l 113 (113)
|||+.+|.||+++|. ++|+|+++|++||++|++|
T Consensus 83 PnV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~l 129 (183)
T 3rz3_A 83 PNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISL 129 (183)
T ss_dssp TTBCTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHH
T ss_pred CCCCCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHH
Confidence 999999999999996 8899999999999999875
No 6
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=2.8e-44 Score=238.89 Aligned_cols=112 Identities=47% Similarity=0.871 Sum_probs=107.3
Q ss_pred CCCchHHHHHHHHHHHhcCCCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCccce
Q 033710 2 ANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPN 81 (113)
Q Consensus 2 a~~~~~~RL~~E~~~l~~~~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HPn 81 (113)
|+..+.|||++|+++++++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 1 sa~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 80 (151)
T 4gpr_A 1 SAAMAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPN 80 (151)
T ss_dssp -CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred CchHHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccce
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 82 IDKLGRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 82 v~~~G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
|+.+|.||+++|.++|+|++++++||++|++|
T Consensus 81 v~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~l 112 (151)
T 4gpr_A 81 INKNGVICLDILKDQWSPALTLSRVLLSISSL 112 (151)
T ss_dssp BCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHH
T ss_pred ECCCCEEEcccccCCCCCCCcHHHHHHHHHHH
Confidence 99999999999999999999999999999874
No 7
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=4.5e-44 Score=239.01 Aligned_cols=110 Identities=39% Similarity=0.751 Sum_probs=106.4
Q ss_pred CchHHHHHHHHHHHhcCCCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCccceee
Q 033710 4 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID 83 (113)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HPnv~ 83 (113)
..+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 8 ~~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 87 (156)
T 2e2c_A 8 HSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVD 87 (156)
T ss_dssp CCHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCc
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 84 KLGRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 84 ~~G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
.+|.||+++|.++|+|++++++||++|++|
T Consensus 88 ~~G~iCl~iL~~~W~p~~~i~~vL~si~~l 117 (156)
T 2e2c_A 88 QSGNICLDILKENWTASYDVRTILLSLQSL 117 (156)
T ss_dssp TTCBBCCGGGTTTCCTTCCHHHHHHHHHHH
T ss_pred cCceEECccccccCCCCCcHHHHHHHHHHH
Confidence 999999999999999999999999999874
No 8
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=3.5e-44 Score=241.41 Aligned_cols=112 Identities=37% Similarity=0.833 Sum_probs=105.8
Q ss_pred CCCCchHHHHHHHHHHHhcCCCCCeEEEeCC-CCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCcc
Q 033710 1 MANSNLPRRIIKETQRLLSEPAPGISASPSE-DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYH 79 (113)
Q Consensus 1 ma~~~~~~RL~~E~~~l~~~~~~gi~~~~~~-~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~H 79 (113)
||+ .+.+||++|+++|++++++|+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 1 M~~-~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 79 (165)
T 2ucz_A 1 MSK-TAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILH 79 (165)
T ss_dssp -CH-HHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSC
T ss_pred CCh-HHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCcc
Confidence 776 677999999999999999999999865 799999999999999999999999999999999999999999999999
Q ss_pred ceeeCCCcEEcccC-------------CCCCCccccHHHHHHHhhcC
Q 033710 80 PNIDKLGRICLDIL-------------KDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 80 Pnv~~~G~icl~~l-------------~~~W~p~~~i~~il~~i~~l 113 (113)
|||+.+|.||+++| .++|+|+++|++||++|++|
T Consensus 80 PNv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~l 126 (165)
T 2ucz_A 80 PNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSM 126 (165)
T ss_dssp TTBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHH
T ss_pred CCCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHH
Confidence 99999999999999 68999999999999999875
No 9
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=5.9e-44 Score=240.49 Aligned_cols=110 Identities=51% Similarity=0.901 Sum_probs=106.5
Q ss_pred CchHHHHHHHHHHHhcCCCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCccceee
Q 033710 4 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID 83 (113)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HPnv~ 83 (113)
..+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 20 ~~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~ 99 (166)
T 2ayv_A 20 QGALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNIN 99 (166)
T ss_dssp TTHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCC
Confidence 45779999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 84 KLGRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 84 ~~G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
.+|.||+++|.++|+|+++|++||++|++|
T Consensus 100 ~~G~ICL~iL~~~WsP~~ti~~vL~sI~sl 129 (166)
T 2ayv_A 100 SQGAICLDILKDQWSPALTISKVLLSISSL 129 (166)
T ss_dssp TTCBBCCGGGTTTCCTTCCHHHHHHHHHHH
T ss_pred CCCeEEcccccccCCCCCcHHHHHHHHHHH
Confidence 999999999999999999999999999874
No 10
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=4e-44 Score=238.33 Aligned_cols=112 Identities=39% Similarity=0.879 Sum_probs=107.4
Q ss_pred CCCCchHHHHHHHHHHHhcCCCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCccc
Q 033710 1 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHP 80 (113)
Q Consensus 1 ma~~~~~~RL~~E~~~l~~~~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HP 80 (113)
||+ .+.+||++|++++++++++|+++.+.++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++|||
T Consensus 1 Ms~-~a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 79 (152)
T 2aak_A 1 MST-PARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHP 79 (152)
T ss_dssp CCC-HHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred CCh-HHHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccC
Confidence 665 4669999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 81 NIDKLGRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 81 nv~~~G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
||+.+|.||+++|.++|+|++++++||++|++|
T Consensus 80 nv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~l 112 (152)
T 2aak_A 80 NIYADGSICLDILQNQWSPIYDVAAILTSIQSL 112 (152)
T ss_dssp TBCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHH
T ss_pred CCCCCCEEechhhcCCCCCCCcHHHHHHHHHHH
Confidence 999999999999999999999999999999874
No 11
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.9e-44 Score=239.50 Aligned_cols=109 Identities=81% Similarity=1.343 Sum_probs=105.8
Q ss_pred chHHHHHHHHHHHhcCCCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCccceeeC
Q 033710 5 NLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK 84 (113)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HPnv~~ 84 (113)
++.+||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 5 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 84 (154)
T 2c2v_B 5 GLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDK 84 (154)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCcc
Confidence 56699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 85 LGRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 85 ~G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
+|.||+++|.++|+|++++++||++|++|
T Consensus 85 ~G~iCl~iL~~~W~p~~~i~~vl~~i~~l 113 (154)
T 2c2v_B 85 LGRICLDILKDKWSPALQIRTVLLSIQAL 113 (154)
T ss_dssp TCBBCCHHHHTSCCTTCCHHHHHHHHHHH
T ss_pred CCeEEchhccCCCCCCCcHHHHHHHHHHH
Confidence 99999999999999999999999999874
No 12
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=5.2e-44 Score=237.31 Aligned_cols=111 Identities=49% Similarity=0.896 Sum_probs=107.1
Q ss_pred CCchHHHHHHHHHHHhcCCCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCcccee
Q 033710 3 NSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (113)
Q Consensus 3 ~~~~~~RL~~E~~~l~~~~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HPnv 82 (113)
+..+.+||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 81 (150)
T 1z2u_A 2 SHMALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNI 81 (150)
T ss_dssp CCHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcC
Confidence 45578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 83 DKLGRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 83 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
+.+|.||+++|.++|+|++++++||++|++|
T Consensus 82 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~l 112 (150)
T 1z2u_A 82 NSNGSICLDILRSQWSPALTISKVLLSICSL 112 (150)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHH
T ss_pred CCCCeEeeccccCCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999874
No 13
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=9.5e-44 Score=239.28 Aligned_cols=110 Identities=50% Similarity=0.914 Sum_probs=106.3
Q ss_pred CchHHHHHHHHHHHhcCCCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCccceee
Q 033710 4 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID 83 (113)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HPnv~ 83 (113)
..+.+||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 18 ~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~ 97 (165)
T 2c4o_A 18 SMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN 97 (165)
T ss_dssp HHHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCC
Confidence 34789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 84 KLGRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 84 ~~G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
.+|.||+++|.++|+|+++|++||++|++|
T Consensus 98 ~~G~ICl~iL~~~W~P~~ti~~vL~si~~l 127 (165)
T 2c4o_A 98 SNGSICLDILRSQWSPALTISKVLLSICSL 127 (165)
T ss_dssp TTCBBCCGGGTTTCCTTCCHHHHHHHHHHH
T ss_pred CCCeEeehhhcCCCCCcCcHHHHHHHHHHH
Confidence 999999999999999999999999999874
No 14
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=4.9e-44 Score=237.24 Aligned_cols=108 Identities=74% Similarity=1.245 Sum_probs=104.8
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCccceeeCC
Q 033710 6 LPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 85 (113)
Q Consensus 6 ~~~RL~~E~~~l~~~~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HPnv~~~ 85 (113)
+.+||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 2 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 81 (149)
T 2r0j_A 2 IPRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKL 81 (149)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCC
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 86 GRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 86 G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
|.||+++|.++|+|++++++||++|++|
T Consensus 82 G~iCl~iL~~~W~p~~~i~~vl~~i~~l 109 (149)
T 2r0j_A 82 GRICLDILKDKWSPALQIRTVLLSIQAL 109 (149)
T ss_dssp CBBCCGGGTTTCCTTSCHHHHHHHHHHH
T ss_pred CEEechhcCCCCCCCCcHHHHHHHHHHH
Confidence 9999999999999999999999999874
No 15
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=5.3e-44 Score=238.43 Aligned_cols=111 Identities=70% Similarity=1.271 Sum_probs=106.7
Q ss_pred CCchHHHHHHHHHHHhcCCCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCcccee
Q 033710 3 NSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (113)
Q Consensus 3 ~~~~~~RL~~E~~~l~~~~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HPnv 82 (113)
...+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 3 ~~~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 82 (155)
T 1jat_A 3 AASLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNI 82 (155)
T ss_dssp CCSCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred hHHHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCC
Confidence 34567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 83 DKLGRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 83 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
+.+|.||+++|.++|+|++++++||++|++|
T Consensus 83 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~l 113 (155)
T 1jat_A 83 DRLGRICLDVLKTNWSPALQIRTVLLSIQAL 113 (155)
T ss_dssp CTTCCBCCGGGTTTCCTTCCHHHHHHHHHHH
T ss_pred CCCCEEEchhhccCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999874
No 16
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.1e-44 Score=238.79 Aligned_cols=109 Identities=40% Similarity=0.808 Sum_probs=105.7
Q ss_pred chHHHHHHHHHHHhcCCCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCccceeeC
Q 033710 5 NLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK 84 (113)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HPnv~~ 84 (113)
.+.+||++|+++|++++++|+++.++++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 13 ~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 92 (158)
T 1zdn_A 13 HIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGA 92 (158)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCCC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 85 LGRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 85 ~G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
+|.||+++|.++|+|++++++||++|++|
T Consensus 93 ~G~iCl~iL~~~W~p~~~i~~vL~~i~~l 121 (158)
T 1zdn_A 93 NGEICVNVLKRDWTAELGIRHVLLTIKCL 121 (158)
T ss_dssp TSBBCHHHHTTTCCTTCCHHHHHHHHHHH
T ss_pred CCEEehhhcCCCCCCCCcHHHHHHHHHHH
Confidence 99999999999999999999999999874
No 17
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.4e-43 Score=239.31 Aligned_cols=111 Identities=49% Similarity=0.887 Sum_probs=107.2
Q ss_pred CCchHHHHHHHHHHHhcCCCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCcccee
Q 033710 3 NSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (113)
Q Consensus 3 ~~~~~~RL~~E~~~l~~~~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HPnv 82 (113)
+.++.+||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv 81 (169)
T 1yh2_A 2 SMQRASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNI 81 (169)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccC
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCcEEcccCC----CCCCccccHHHHHHHhhcC
Q 033710 83 DKLGRICLDILK----DKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 83 ~~~G~icl~~l~----~~W~p~~~i~~il~~i~~l 113 (113)
+.+|.||+++|. ++|+|++++++||++|++|
T Consensus 82 ~~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~l 116 (169)
T 1yh2_A 82 DSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLL 116 (169)
T ss_dssp CTTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHH
T ss_pred CcCCeEecccccCCcccCCCCCCcHHHHHHHHHHH
Confidence 999999999998 8999999999999999874
No 18
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=2.7e-43 Score=236.86 Aligned_cols=110 Identities=35% Similarity=0.746 Sum_probs=105.0
Q ss_pred CchHHHHHHHHHHHhcCCCCCeEEEeCCC-CCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCcccee
Q 033710 4 SNLPRRIIKETQRLLSEPAPGISASPSED-NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (113)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~gi~~~~~~~-~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HPnv 82 (113)
.++.|||++|++++++++++|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 ~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV 81 (164)
T 3h8k_A 2 GTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNI 81 (164)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCC
Confidence 45789999999999999999999998765 99999999999999999999999999999999999999999999999999
Q ss_pred eCCCcEEcccCC-------------CCCCccccHHHHHHHhhcC
Q 033710 83 DKLGRICLDILK-------------DKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 83 ~~~G~icl~~l~-------------~~W~p~~~i~~il~~i~~l 113 (113)
+.+|.||+++|. ++|+|+++|++||++|++|
T Consensus 82 ~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~l 125 (164)
T 3h8k_A 82 YPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSM 125 (164)
T ss_dssp CTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHH
T ss_pred CCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHH
Confidence 999999999996 7899999999999999874
No 19
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-43 Score=241.54 Aligned_cols=111 Identities=41% Similarity=0.669 Sum_probs=105.9
Q ss_pred CCchHHHHHHHHHHHhcCCCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCcccee
Q 033710 3 NSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (113)
Q Consensus 3 ~~~~~~RL~~E~~~l~~~~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HPnv 82 (113)
+..+.+||++|+++|++++++||++.++++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 28 ~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV 107 (179)
T 1i7k_A 28 RGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNV 107 (179)
T ss_dssp --CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTB
T ss_pred ChHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCcc
Confidence 35577999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 83 DKLGRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 83 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
+.+|.||+++|.++|+|+++|++||++|++|
T Consensus 108 ~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sl 138 (179)
T 1i7k_A 108 DTQGNISLDILKEKWSALYDVRTILLSIQSL 138 (179)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHH
T ss_pred ccCCeEEcccCcCcCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999874
No 20
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=5.4e-43 Score=236.97 Aligned_cols=112 Identities=33% Similarity=0.749 Sum_probs=106.0
Q ss_pred CCCchHHHHHHHHHHHhcCCCCCeEEEeCC-CCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCccc
Q 033710 2 ANSNLPRRIIKETQRLLSEPAPGISASPSE-DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHP 80 (113)
Q Consensus 2 a~~~~~~RL~~E~~~l~~~~~~gi~~~~~~-~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HP 80 (113)
++..+.|||+||+++|++++++|+++.+.+ +|+++|+++|.||++||||||.|+++|.||++||++||+|+|.|++|||
T Consensus 14 ~~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HP 93 (172)
T 2awf_A 14 LVPRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHP 93 (172)
T ss_dssp CCCTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCT
T ss_pred ChHHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccC
Confidence 356688999999999999999999999865 7999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCcEEcccCC-------------CCCCccccHHHHHHHhhcC
Q 033710 81 NIDKLGRICLDILK-------------DKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 81 nv~~~G~icl~~l~-------------~~W~p~~~i~~il~~i~~l 113 (113)
||+.+|.||+++|. ++|+|+++|++||++|++|
T Consensus 94 NV~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sl 139 (172)
T 2awf_A 94 NVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISM 139 (172)
T ss_dssp TBCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHH
T ss_pred CCCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHH
Confidence 99999999999996 6899999999999999875
No 21
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=1.9e-43 Score=234.38 Aligned_cols=108 Identities=41% Similarity=0.812 Sum_probs=104.3
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEEeCCC-CCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCccceeeC
Q 033710 6 LPRRIIKETQRLLSEPAPGISASPSED-NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK 84 (113)
Q Consensus 6 ~~~RL~~E~~~l~~~~~~gi~~~~~~~-~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HPnv~~ 84 (113)
+.+||++|++++++++++|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~ 81 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISS 81 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCS
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcC
Confidence 469999999999999999999999877 9999999999999999999999999999999999999999999999999998
Q ss_pred -CCcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 85 -LGRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 85 -~G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
+|.||+++|.++|+|++++++||++|++|
T Consensus 82 ~~G~iCl~iL~~~W~p~~~i~~vl~~i~~l 111 (149)
T 1fxt_A 82 VTGAICLDILKNAWSPVITLKSALISLQAL 111 (149)
T ss_dssp SSCCBCCHHHHTSCCTTCCHHHHHHHHHHH
T ss_pred CCCeEeCCcCCCCCCCCCcHHHHHHHHHHH
Confidence 99999999999999999999999999874
No 22
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=6.8e-43 Score=233.91 Aligned_cols=113 Identities=45% Similarity=0.805 Sum_probs=105.4
Q ss_pred CCCC-chHHHHHHHHHHHhcC---CCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecc
Q 033710 1 MANS-NLPRRIIKETQRLLSE---PAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTK 76 (113)
Q Consensus 1 ma~~-~~~~RL~~E~~~l~~~---~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~ 76 (113)
|+++ .+.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 3 ~~Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 82 (159)
T 2bep_A 3 MAMANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITK 82 (159)
T ss_dssp -CCCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred ccchHHHHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCC
Confidence 4444 4679999999999985 57899999999999999999999999999999999999999999999999999999
Q ss_pred CccceeeC-CCcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 77 IYHPNIDK-LGRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 77 i~HPnv~~-~G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
+|||||+. +|.||+++|.++|+|++++++||++|++|
T Consensus 83 i~HPni~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~l 120 (159)
T 2bep_A 83 IWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQAL 120 (159)
T ss_dssp CCBTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHH
T ss_pred CCccCCCCCCCEEeChhhhccCCCCCcHHHHHHHHHHH
Confidence 99999995 99999999999999999999999999875
No 23
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-43 Score=238.96 Aligned_cols=112 Identities=29% Similarity=0.549 Sum_probs=106.3
Q ss_pred CCCCchHHHHHHHHHHHhcCCCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCccc
Q 033710 1 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHP 80 (113)
Q Consensus 1 ma~~~~~~RL~~E~~~l~~~~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HP 80 (113)
|++ .+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 20 M~~-~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HP 98 (169)
T 1yrv_A 20 MHG-RAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHP 98 (169)
T ss_dssp GGC-HHHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCT
T ss_pred cCh-HHHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccC
Confidence 443 4679999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ee-eCCCcEEcccCC--CCCCccccHHHHHHHhhcC
Q 033710 81 NI-DKLGRICLDILK--DKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 81 nv-~~~G~icl~~l~--~~W~p~~~i~~il~~i~~l 113 (113)
|| +.+|.||+++|. ++|+|++++++||++|++|
T Consensus 99 NI~~~~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sl 134 (169)
T 1yrv_A 99 NVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVM 134 (169)
T ss_dssp TBCTTTCCBCCHHHHCGGGCCTTCCHHHHHHHHHHH
T ss_pred cccCCCCeEeehhhcCCcCCCCcCCHHHHHHHHHHH
Confidence 99 789999999998 8999999999999999874
No 24
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=4.3e-43 Score=235.67 Aligned_cols=111 Identities=34% Similarity=0.705 Sum_probs=104.7
Q ss_pred CCchHHHHHHHHHHHhcCCCCCeEEEeCCC-----CCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccC
Q 033710 3 NSNLPRRIIKETQRLLSEPAPGISASPSED-----NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI 77 (113)
Q Consensus 3 ~~~~~~RL~~E~~~l~~~~~~gi~~~~~~~-----~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i 77 (113)
+.++.+||+||++++++++++|+++.|.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++
T Consensus 8 ~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i 87 (163)
T 3rcz_B 8 SSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPL 87 (163)
T ss_dssp -CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCC
Confidence 456889999999999999999999998765 999999999999999999999999999999999999999999999
Q ss_pred ccceeeCCCcEEcccCCC--CCCccccHHHHHHHhhcC
Q 033710 78 YHPNIDKLGRICLDILKD--KWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 78 ~HPnv~~~G~icl~~l~~--~W~p~~~i~~il~~i~~l 113 (113)
|||||+.+|.||+++|.+ +|+|+++|++||++|++|
T Consensus 88 ~HPnV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~l 125 (163)
T 3rcz_B 88 FHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDL 125 (163)
T ss_dssp CSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHH
T ss_pred ccCCCCCCCcEeccccCCCCCcCCcCcHHHHHHHHHHH
Confidence 999999999999999975 599999999999999874
No 25
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=9e-43 Score=239.41 Aligned_cols=110 Identities=43% Similarity=0.812 Sum_probs=102.2
Q ss_pred CchHHHHHHHHHHHhcCCC-------------CCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCe
Q 033710 4 SNLPRRIIKETQRLLSEPA-------------PGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPK 70 (113)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~-------------~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~ 70 (113)
..+.+||++|+++|+++++ .|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+
T Consensus 31 ~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~ 110 (193)
T 2f4z_A 31 PREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPK 110 (193)
T ss_dssp -CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCE
T ss_pred CHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCe
Confidence 4567899999999999886 799999999999999999999999999999999999999999999999
Q ss_pred EEEeccCccceee-CCCcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 71 VRFLTKIYHPNID-KLGRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 71 v~f~t~i~HPnv~-~~G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
|+|.|++|||||+ .+|.||+++|.++|+|+++|++||++|++|
T Consensus 111 V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sl 154 (193)
T 2f4z_A 111 MKFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAM 154 (193)
T ss_dssp EEESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHHHH
T ss_pred EEEecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHHHHHH
Confidence 9999999999999 599999999999999999999999999874
No 26
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=1.7e-42 Score=238.20 Aligned_cols=109 Identities=51% Similarity=0.877 Sum_probs=105.8
Q ss_pred chHHHHHHHHHHHhcCCCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCccceeeC
Q 033710 5 NLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK 84 (113)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HPnv~~ 84 (113)
.+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 48 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~ 127 (194)
T 3bzh_A 48 TSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINS 127 (194)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceECC
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 85 LGRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 85 ~G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
+|.||+++|.++|+|+++|++||++|++|
T Consensus 128 ~G~ICL~iL~~~WsP~~ti~~vL~sI~~l 156 (194)
T 3bzh_A 128 QGVICLDILKDNWSPALTISKVLLSICSL 156 (194)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHH
T ss_pred CCceechhhhccCCCcCcHHHHHHHHHHH
Confidence 99999999999999999999999999874
No 27
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=7.4e-43 Score=233.32 Aligned_cols=112 Identities=30% Similarity=0.640 Sum_probs=103.9
Q ss_pred CCCCchHHHHHHHHHHHhcCCCCCeEEEeCC-----CCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEec
Q 033710 1 MANSNLPRRIIKETQRLLSEPAPGISASPSE-----DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLT 75 (113)
Q Consensus 1 ma~~~~~~RL~~E~~~l~~~~~~gi~~~~~~-----~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t 75 (113)
||+ .+.+||++|++++++++++|+++.|.+ +|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|
T Consensus 1 Ms~-~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 79 (157)
T 2gjd_A 1 MSS-LCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPA 79 (157)
T ss_dssp --C-HHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCT
T ss_pred CCh-HHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccC
Confidence 664 566999999999999999999998864 48999999999999999999999999999999999999999999
Q ss_pred cCccceeeCCCcEEcccCCC--CCCccccHHHHHHHhhcC
Q 033710 76 KIYHPNIDKLGRICLDILKD--KWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 76 ~i~HPnv~~~G~icl~~l~~--~W~p~~~i~~il~~i~~l 113 (113)
++|||||+.+|.||+++|.. +|+|++++++||++|++|
T Consensus 80 ~i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~l 119 (157)
T 2gjd_A 80 GFYHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDL 119 (157)
T ss_dssp TCCCTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHH
T ss_pred CCccCCCCCCCcEeeecccCCCCCCCCCcHHHHHHHHHHH
Confidence 99999999999999999976 799999999999999874
No 28
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=1e-42 Score=242.63 Aligned_cols=110 Identities=45% Similarity=0.789 Sum_probs=105.9
Q ss_pred CchHHHHHHHHHHHhcCCCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCccceee
Q 033710 4 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID 83 (113)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HPnv~ 83 (113)
..+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 22 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 101 (216)
T 2pwq_A 22 SKELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNIS 101 (216)
T ss_dssp CHHHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCc
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -CCCcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 84 -KLGRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 84 -~~G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
.+|.||+++|.++|+|+++|++||++|++|
T Consensus 102 ~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sL 132 (216)
T 2pwq_A 102 SQTGAICLDVLKNEWSPALTIRTALLSIQAL 132 (216)
T ss_dssp TTTCBBCCHHHHHHCCTTCCHHHHHHHHHHH
T ss_pred CCCCEEEchhhcccCCCCCcHHHHHHHHHHH
Confidence 499999999999999999999999999875
No 29
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=3.4e-42 Score=238.09 Aligned_cols=112 Identities=46% Similarity=0.827 Sum_probs=104.3
Q ss_pred CCCCchHHHHHHHHHHHhcCC---CCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccC
Q 033710 1 MANSNLPRRIIKETQRLLSEP---APGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI 77 (113)
Q Consensus 1 ma~~~~~~RL~~E~~~l~~~~---~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i 77 (113)
||+. +.+||++|+++|++++ +.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++
T Consensus 2 Ms~~-a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i 80 (201)
T 3k9o_A 2 MANI-AVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKI 80 (201)
T ss_dssp --CT-THHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred CcHH-HHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCc
Confidence 6654 5699999999999873 68999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeC-CCcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 78 YHPNIDK-LGRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 78 ~HPnv~~-~G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
|||||+. +|.||+++|.++|+|++++++||++|++|
T Consensus 81 ~HPnv~~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~l 117 (201)
T 3k9o_A 81 WHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQAL 117 (201)
T ss_dssp CBTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHH
T ss_pred ccCCCcCCCCeeeCcccccCCCCCCCHHHHHHHHHHH
Confidence 9999995 99999999999999999999999999874
No 30
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=4.8e-42 Score=225.14 Aligned_cols=112 Identities=27% Similarity=0.439 Sum_probs=101.3
Q ss_pred CCCCchHHHHHHHHHHHhcC-CCCCeEEEeCC-C--CCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecc
Q 033710 1 MANSNLPRRIIKETQRLLSE-PAPGISASPSE-D--NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTK 76 (113)
Q Consensus 1 ma~~~~~~RL~~E~~~l~~~-~~~gi~~~~~~-~--~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~ 76 (113)
||..++.+||+||+++++++ +++|+++.+.+ + |+++|+++|.||++|+||||.|+++|.||++||++||+|+|.|+
T Consensus 2 m~~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 81 (138)
T 1jat_B 2 MSKVPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISK 81 (138)
T ss_dssp -CCCCHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred cchHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcc
Confidence 88888999999999999998 78999998843 3 49999999999999999999999999999999999999999999
Q ss_pred CccceeeCC-CcE--EcccCCCCCCccccHHHHHHHhhcC
Q 033710 77 IYHPNIDKL-GRI--CLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 77 i~HPnv~~~-G~i--cl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
+|||||+.+ |.| |+++|. +|+|++++++||++|++|
T Consensus 82 i~HPnv~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~i~~l 120 (138)
T 1jat_B 82 INLPCVNPTTGEVQTDFHTLR-DWKRAYTMETLLLDLRKE 120 (138)
T ss_dssp CCCTTBCTTTCBBCTTSHHHH-TCCTTCCHHHHHHHHHHH
T ss_pred cccCCEeCCCCEEeeecccCC-CCCCcCcHHHHHHHHHHH
Confidence 999999986 999 899886 899999999999999874
No 31
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=3.6e-42 Score=230.79 Aligned_cols=109 Identities=33% Similarity=0.704 Sum_probs=103.1
Q ss_pred chHHHHHHHHHHHhcCCCCCeEEEeCC-----CCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCcc
Q 033710 5 NLPRRIIKETQRLLSEPAPGISASPSE-----DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYH 79 (113)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~gi~~~~~~-----~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~H 79 (113)
.+.+||++|+++|++++++|+++.+.+ +|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++||
T Consensus 7 ~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 86 (161)
T 2grr_A 7 IALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFH 86 (161)
T ss_dssp HHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCS
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCccc
Confidence 467999999999999999999998753 689999999999999999999999999999999999999999999999
Q ss_pred ceeeCCCcEEcccCCC--CCCccccHHHHHHHhhcC
Q 033710 80 PNIDKLGRICLDILKD--KWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 80 Pnv~~~G~icl~~l~~--~W~p~~~i~~il~~i~~l 113 (113)
|||+.+|.||+++|.. +|+|++++++||++|++|
T Consensus 87 Pnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~l 122 (161)
T 2grr_A 87 PNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQEL 122 (161)
T ss_dssp TTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHH
T ss_pred CCCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHHHH
Confidence 9999999999999975 899999999999999874
No 32
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=9.6e-42 Score=228.25 Aligned_cols=110 Identities=25% Similarity=0.439 Sum_probs=102.1
Q ss_pred CchHHHHHHHHHHHhcCCCCC-eEEEe-CCCC--CcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCcc
Q 033710 4 SNLPRRIIKETQRLLSEPAPG-ISASP-SEDN--MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYH 79 (113)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~g-i~~~~-~~~~--~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~H 79 (113)
.++.+||+||++++++++++| +++.+ +++| +++|+++|.||++|+||||.|+++|.||++||++||+|+|.|++||
T Consensus 24 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~H 103 (160)
T 2a4d_A 24 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINM 103 (160)
T ss_dssp HHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCC
T ss_pred chHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCcee
Confidence 357789999999999999888 77776 4555 8999999999999999999999999999999999999999999999
Q ss_pred ceee-CCCcEEcccCC--CCCCccccHHHHHHHhhcC
Q 033710 80 PNID-KLGRICLDILK--DKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 80 Pnv~-~~G~icl~~l~--~~W~p~~~i~~il~~i~~l 113 (113)
|||+ .+|.||+++|. ++|+|++++++||++|++|
T Consensus 104 PNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~l 140 (160)
T 2a4d_A 104 NGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRL 140 (160)
T ss_dssp TTBCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHHHH
T ss_pred CCEECCCCEEehhhcCCccCCCccCcHHHHHHHHHHH
Confidence 9999 69999999997 8999999999999999874
No 33
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=6.7e-42 Score=228.24 Aligned_cols=108 Identities=36% Similarity=0.727 Sum_probs=103.7
Q ss_pred chHHHHHHHHHHHhcCCCCCeEE-EeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCccceee
Q 033710 5 NLPRRIIKETQRLLSEPAPGISA-SPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID 83 (113)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~gi~~-~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HPnv~ 83 (113)
.+.+||++|+++|++++++|+++ .++++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~ 82 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVD 82 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCC
Confidence 46799999999999999999999 789999999999999 9999999999999999999999999999999999999999
Q ss_pred CCCcEEcccC-CCCCCccccHHHHHHHhhcC
Q 033710 84 KLGRICLDIL-KDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 84 ~~G~icl~~l-~~~W~p~~~i~~il~~i~~l 113 (113)
.+|.||+++| .++|+|++++++||++|++|
T Consensus 83 ~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~l 113 (155)
T 1wzv_A 83 ENGQICLPIISSENWKPCTKTCQVLEALNVL 113 (155)
T ss_dssp TTCBCCCGGGCTTTCCTTCCHHHHHHHHHHH
T ss_pred CCCeEeecCCCccCCCCCCcHHHHHHHHHHH
Confidence 9999999999 89999999999999999874
No 34
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.4e-41 Score=226.56 Aligned_cols=107 Identities=33% Similarity=0.619 Sum_probs=101.6
Q ss_pred CchHHHHHHHHHHHhcCCCCCeEEE-eCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCcccee
Q 033710 4 SNLPRRIIKETQRLLSEPAPGISAS-PSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (113)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~gi~~~-~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HPnv 82 (113)
..+.+||++|++++ ++++|+++. ++++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 5 ~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 81 (160)
T 1y8x_A 5 SAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNI 81 (160)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcC
Confidence 45789999999999 577899998 7899999999998 9999999999999999999999999999999999999999
Q ss_pred eCCCcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 83 DKLGRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 83 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
+.+|.||+++|.++|+|++++++||++|++|
T Consensus 82 ~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~l 112 (160)
T 1y8x_A 82 DLEGNVCLNILREDWKPVLTINSIIYGLQYL 112 (160)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHH
T ss_pred CCCCeEEcccchhhccCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999874
No 35
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=3.8e-41 Score=224.67 Aligned_cols=110 Identities=27% Similarity=0.489 Sum_probs=102.1
Q ss_pred CCchHHHHHHHHHHHhcC-CCCCeEEEeCC-C--CCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCc
Q 033710 3 NSNLPRRIIKETQRLLSE-PAPGISASPSE-D--NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIY 78 (113)
Q Consensus 3 ~~~~~~RL~~E~~~l~~~-~~~gi~~~~~~-~--~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~ 78 (113)
..++.+||++|+++++++ +++|+++.+.+ + |+++|+++|.||++||||||.|+++|.||++||++||+|+|.|++|
T Consensus 19 ~~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~ 98 (156)
T 2q0v_A 19 IVPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIE 98 (156)
T ss_dssp CCCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCC
T ss_pred cchHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccc
Confidence 456789999999999998 78899998843 3 5999999999999999999999999999999999999999999999
Q ss_pred cceeeCCCcE---EcccCCCCCCccccHHHHHHHhhcC
Q 033710 79 HPNIDKLGRI---CLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 79 HPnv~~~G~i---cl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
||||+.+|.| |+++|. +|+|++++++||++|++|
T Consensus 99 HPNV~~~G~icisCL~iL~-~WsP~~ti~~vL~sI~~l 135 (156)
T 2q0v_A 99 MSCVDNCGRVIKNNLHILK-NWNRNYTIETILISLRQE 135 (156)
T ss_dssp CTTBCTTSBBCGGGSHHHH-TCCTTCCHHHHHHHHHHH
T ss_pred cCCCccCCeEehhhccccc-CCCCcCcHHHHHHHHHHH
Confidence 9999999999 888887 599999999999999874
No 36
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=4.9e-41 Score=227.38 Aligned_cols=113 Identities=32% Similarity=0.617 Sum_probs=100.9
Q ss_pred CCCC-chHHHHHHHHHHHhc-C-C------CC---CeEEEe-CCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCC
Q 033710 1 MANS-NLPRRIIKETQRLLS-E-P------AP---GISASP-SEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67 (113)
Q Consensus 1 ma~~-~~~~RL~~E~~~l~~-~-~------~~---gi~~~~-~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~ 67 (113)
||++ .+.+||++|+++|++ + + +. ++.+.+ +++|+++|+++|.||++|||+||.|+++|.||++||++
T Consensus 1 ~~Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~ 80 (172)
T 2y9m_A 1 GAMADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMN 80 (172)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTS
T ss_pred CCCcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCC
Confidence 4554 477999999999998 5 3 32 466778 88999999999999999999999999999999999999
Q ss_pred CCeEEEec-cCccceee-CCCcEEcccCC-CCCCccccHHHHHHHhhcC
Q 033710 68 APKVRFLT-KIYHPNID-KLGRICLDILK-DKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 68 pP~v~f~t-~i~HPnv~-~~G~icl~~l~-~~W~p~~~i~~il~~i~~l 113 (113)
||+|+|.| ++|||||+ .+|.||+++|. ++|+|++++++||++|++|
T Consensus 81 PP~v~f~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~~l 129 (172)
T 2y9m_A 81 PPKISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRL 129 (172)
T ss_dssp CCEEEECTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHHHH
T ss_pred CCEEEEeeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHHHH
Confidence 99999999 99999996 79999999998 8999999999999999874
No 37
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=5.7e-41 Score=226.12 Aligned_cols=109 Identities=31% Similarity=0.629 Sum_probs=102.9
Q ss_pred CchHHHHHHHHHHHhcCCCCCeEEEe-CCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCcccee
Q 033710 4 SNLPRRIIKETQRLLSEPAPGISASP-SEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (113)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~gi~~~~-~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HPnv 82 (113)
..+.|||++|+++|++++++|+++.+ +++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 13 s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 91 (167)
T 3fn1_B 13 SVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNI 91 (167)
T ss_dssp CHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCC
Confidence 44789999999999999999999985 568899999998 8999999999999999999999999999999999999999
Q ss_pred eCCCcEEcccCCC------CCCccccHHHHHHHhhcC
Q 033710 83 DKLGRICLDILKD------KWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 83 ~~~G~icl~~l~~------~W~p~~~i~~il~~i~~l 113 (113)
+.+|.||+++|.. +|+|++++++||++|++|
T Consensus 92 ~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~l 128 (167)
T 3fn1_B 92 TETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSL 128 (167)
T ss_dssp CTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHT
T ss_pred CCCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHH
Confidence 9999999999975 799999999999999976
No 38
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=4.5e-42 Score=239.25 Aligned_cols=109 Identities=39% Similarity=0.806 Sum_probs=103.9
Q ss_pred chHHHHHHHHHHHhcCCCCCeEEEeCCC-CCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCccceee
Q 033710 5 NLPRRIIKETQRLLSEPAPGISASPSED-NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID 83 (113)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~gi~~~~~~~-~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HPnv~ 83 (113)
++.+||++|++++++++++|+++.+.++ ++++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 81 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 81 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCc
Confidence 4679999999999999999999999766 567999999999999999999999999999999999999999999999999
Q ss_pred C-CCcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 84 K-LGRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 84 ~-~G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
. +|.||+++|.++|+|++++++||++|++|
T Consensus 82 ~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sL 112 (215)
T 1tte_A 82 SVTGAICLDILRNAWSPVITLKSALISLQAL 112 (215)
T ss_dssp SSSSCCCSSTTTCCSCTTCCHHHHHHHHHHH
T ss_pred CCCCEEECccCCCCCCCcCcHHHHHHHHHHH
Confidence 9 99999999999999999999999999875
No 39
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.9e-41 Score=229.25 Aligned_cols=107 Identities=32% Similarity=0.585 Sum_probs=101.7
Q ss_pred CchHHHHHHHHHHHhcCCCCCeEEE-eCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCcccee
Q 033710 4 SNLPRRIIKETQRLLSEPAPGISAS-PSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82 (113)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~gi~~~-~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HPnv 82 (113)
..+.+||++|+++| ++++|+++. ++++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 25 ~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV 101 (180)
T 2nvu_C 25 SAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNI 101 (180)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCC
Confidence 45789999999999 578899998 7899999999998 9999999999999999999999999999999999999999
Q ss_pred eCCCcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 83 DKLGRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 83 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
+.+|.||+++|.++|+|++++++||++|++|
T Consensus 102 ~~~G~iCl~iL~~~W~p~~~i~~vL~si~~l 132 (180)
T 2nvu_C 102 DLEGNVALNILREDWKPVLTINSIIYGLQYL 132 (180)
T ss_dssp CTTSBBCCGGGTTSCCTTCCHHHHHHHHHHH
T ss_pred CCCCcEEcccccccCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999874
No 40
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=5.2e-41 Score=238.59 Aligned_cols=109 Identities=45% Similarity=0.818 Sum_probs=104.0
Q ss_pred chHHHHHHHHHHHhcC---CCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCccce
Q 033710 5 NLPRRIIKETQRLLSE---PAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPN 81 (113)
Q Consensus 5 ~~~~RL~~E~~~l~~~---~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HPn 81 (113)
.+.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 57 ~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPN 136 (253)
T 3e46_A 57 IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPN 136 (253)
T ss_dssp HHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccCC
Confidence 4679999999999987 4689999999999999999999999999999999999999999999999999999999999
Q ss_pred eeC-CCcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 82 IDK-LGRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 82 v~~-~G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
|+. +|.||+++|.++|+|+++|++||++|++|
T Consensus 137 V~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~l 169 (253)
T 3e46_A 137 ISSVTGAICLDILKDQWAAAMTLRTVLLSLQAL 169 (253)
T ss_dssp BCTTTCBBCCGGGTTCCCTTCCHHHHHHHHHHH
T ss_pred ccCCCCeeecccccCCCCCCCCHHHHHHHHHHH
Confidence 995 99999999999999999999999999874
No 41
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=3.9e-41 Score=227.37 Aligned_cols=110 Identities=25% Similarity=0.439 Sum_probs=102.1
Q ss_pred CchHHHHHHHHHHHhcCCCCC-eEEEe-CCCC--CcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCcc
Q 033710 4 SNLPRRIIKETQRLLSEPAPG-ISASP-SEDN--MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYH 79 (113)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~g-i~~~~-~~~~--~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~H 79 (113)
.++.+||++|++++++++++| +++.+ +++| +++|+++|.||++|+||||.|+++|.||++||++||+|+|.|++||
T Consensus 34 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~H 113 (170)
T 2hlw_A 34 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINM 113 (170)
T ss_dssp CCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEeccccc
Confidence 457899999999999998888 66776 4554 9999999999999999999999999999999999999999999999
Q ss_pred ceee-CCCcEEcccCC--CCCCccccHHHHHHHhhcC
Q 033710 80 PNID-KLGRICLDILK--DKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 80 Pnv~-~~G~icl~~l~--~~W~p~~~i~~il~~i~~l 113 (113)
|||+ .+|.||+++|. ++|+|++++++||++|++|
T Consensus 114 PNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~l 150 (170)
T 2hlw_A 114 NGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRL 150 (170)
T ss_dssp SSBCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHHHH
T ss_pred CCEeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHHHH
Confidence 9999 69999999997 8999999999999999874
No 42
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=8.8e-41 Score=222.62 Aligned_cols=107 Identities=35% Similarity=0.734 Sum_probs=100.7
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEE-eCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCccceeeC
Q 033710 6 LPRRIIKETQRLLSEPAPGISAS-PSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK 84 (113)
Q Consensus 6 ~~~RL~~E~~~l~~~~~~gi~~~-~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HPnv~~ 84 (113)
+.+||++|+++|++++++|+++. ++++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 81 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDE 81 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCC
Confidence 55899999999999999999865 47889999999998 99999999999999999999999999999999999999999
Q ss_pred CCcEEcccCC-CCCCccccHHHHHHHhhcC
Q 033710 85 LGRICLDILK-DKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 85 ~G~icl~~l~-~~W~p~~~i~~il~~i~~l 113 (113)
+|.||+++|. ++|+|++++++||++|++|
T Consensus 82 ~G~iCl~iL~~~~W~p~~~i~~vl~~i~~l 111 (154)
T 1c4z_D 82 KGQVCLPVISAENWKPATKTDQVIQSLIAL 111 (154)
T ss_dssp TCBBCCTTTSSSSCCTTCCHHHHHHHHHHH
T ss_pred CCEEECCCCCCCCCCCCCcHHHHHHHHHHH
Confidence 9999999996 8999999999999999874
No 43
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=1.6e-40 Score=223.91 Aligned_cols=108 Identities=30% Similarity=0.559 Sum_probs=101.3
Q ss_pred CCCCchHHHHHHHHHHHhcCC------------CCCeEEEeCCCCCcEEEEEEEcCCCCCCC--CCEEEEEEeCCCCCCC
Q 033710 1 MANSNLPRRIIKETQRLLSEP------------APGISASPSEDNMRYFNVMILGPTQSPYE--GGVFKLELFLPEEYPM 66 (113)
Q Consensus 1 ma~~~~~~RL~~E~~~l~~~~------------~~gi~~~~~~~~~~~w~~~i~gp~~t~y~--g~~f~~~i~f~~~YP~ 66 (113)
||+ .+.|||++|+++|++++ ..|+++.++++|+++|+++|.||++|+|+ ||.|+++|.||++||+
T Consensus 5 Ms~-~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~ 83 (167)
T 4ds2_A 5 MKN-ISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPH 83 (167)
T ss_dssp CCC-CCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTT
T ss_pred ccH-HHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCC
Confidence 665 45699999999999977 67999999999999999999999999999 9999999999999999
Q ss_pred CCCeEEEeccCccceeeCCCcEEcccCCCCCCccccHHHHHHH
Q 033710 67 AAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLR 109 (113)
Q Consensus 67 ~pP~v~f~t~i~HPnv~~~G~icl~~l~~~W~p~~~i~~il~~ 109 (113)
+||+|+|.|++|||||+.+|.||+++|.++|+|+++++++|++
T Consensus 84 ~pP~v~f~t~i~HPnv~~~G~iCl~il~~~W~p~~~i~~vll~ 126 (167)
T 4ds2_A 84 EPPTVRFVTPVYSPLVTGEGGICDRMVNDFWTPDQHASDVIKL 126 (167)
T ss_dssp SCCEEEESSCCCCSSCCTTSCCCTHHHHTTCCTTSCHHHHHHH
T ss_pred CCCEEEEeCCcccccCCCCCEEEcccCcCCCCCCCChHHHHHH
Confidence 9999999999999999999999999999999999999987543
No 44
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=3.9e-41 Score=223.91 Aligned_cols=106 Identities=31% Similarity=0.712 Sum_probs=98.7
Q ss_pred chHHHHHHHHHHHhcCCCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCccceeeC
Q 033710 5 NLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK 84 (113)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HPnv~~ 84 (113)
++.|||+||+++++++ |+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 2 sa~~Rl~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~ 78 (152)
T 2onu_A 2 TSLTRKQCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDE 78 (152)
T ss_dssp -CCCHHHHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred hHHHHHHHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcC
Confidence 4568999999999874 7889999999999999999999999999999999999999999999999999999999995
Q ss_pred -CCcEEcccCCCCCCccccHHHHHHH-hhcC
Q 033710 85 -LGRICLDILKDKWSPALQIRTVLLR-YCEL 113 (113)
Q Consensus 85 -~G~icl~~l~~~W~p~~~i~~il~~-i~~l 113 (113)
+|.||+++|.++|+|++++++||++ |++|
T Consensus 79 ~~G~iCl~il~~~W~p~~~i~~vl~~ii~~L 109 (152)
T 2onu_A 79 ASGSVCLDVINQTWTPLYSLVNVFEVFLPQL 109 (152)
T ss_dssp TTCBBCHHHHHHHCCTTCCHHHHHHTHHHHH
T ss_pred cCCeEecccccccCCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999998 5553
No 45
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=8.2e-41 Score=227.27 Aligned_cols=109 Identities=31% Similarity=0.706 Sum_probs=99.1
Q ss_pred CCCC-chHHHHHHHHHHHhcCCCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCcc
Q 033710 1 MANS-NLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYH 79 (113)
Q Consensus 1 ma~~-~~~~RL~~E~~~l~~~~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~H 79 (113)
|++. ++.|||++|+++|++ +|+++.+. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 20 ms~~~~a~~RL~kEl~~l~~---~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~H 95 (179)
T 2z5d_A 20 MSSPSPGKRRMDTDVIKLIE---SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFH 95 (179)
T ss_dssp ---CCHHHHHHHHHHHHHHH---SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCB
T ss_pred CCCchHHHHHHHHHHHhcCc---CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCcc
Confidence 5553 478999999999985 57888887 678999999999999999999999999999999999999999999999
Q ss_pred ceeeC-CCcEEcccCCCCCCccccHHHHHHH-hhcC
Q 033710 80 PNIDK-LGRICLDILKDKWSPALQIRTVLLR-YCEL 113 (113)
Q Consensus 80 Pnv~~-~G~icl~~l~~~W~p~~~i~~il~~-i~~l 113 (113)
|||+. +|.||+++|.++|+|++++++||++ |++|
T Consensus 96 PNV~~~~G~ICL~iL~~~WsP~~ti~~iL~s~I~~L 131 (179)
T 2z5d_A 96 PNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQL 131 (179)
T ss_dssp TTBCTTTCBBCHHHHHHHCCTTCCTTHHHHTHHHHH
T ss_pred CcCCCCCCeEeccccccCCCCCCCHHHHHHHHHHHH
Confidence 99998 9999999999999999999999999 8764
No 46
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-39 Score=223.25 Aligned_cols=108 Identities=29% Similarity=0.631 Sum_probs=96.8
Q ss_pred CchHHHHHHHHHHHhcCCCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCccceee
Q 033710 4 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID 83 (113)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HPnv~ 83 (113)
..+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ |||++
T Consensus 13 ~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~ 90 (187)
T 2f4w_A 13 TTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFK 90 (187)
T ss_dssp -CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Cceec
Confidence 4578999999999999999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred CCCcEEcccC---CCCCCccccHHHHHHHhhcC
Q 033710 84 KLGRICLDIL---KDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 84 ~~G~icl~~l---~~~W~p~~~i~~il~~i~~l 113 (113)
.+|.||+++| .++|+|+++|++||++|++|
T Consensus 91 ~~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sl 123 (187)
T 2f4w_A 91 CNTRLCLSITDFHPDTWNPAWSVSTILTGLLSF 123 (187)
T ss_dssp TTSCBC----------CCTTCCHHHHHHHHHHH
T ss_pred cCCeEeeeccccCccCCCCcCcHHHHHHHHHHH
Confidence 9999999999 68999999999999999874
No 47
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=4.7e-40 Score=222.34 Aligned_cols=105 Identities=31% Similarity=0.676 Sum_probs=96.5
Q ss_pred chHHHHHHHHHHHhcCCCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCccceeeC
Q 033710 5 NLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK 84 (113)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HPnv~~ 84 (113)
++.+||++|++++++++. ++ +.++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~ 87 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDE 87 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCT
T ss_pred cHHHHHHHHHHHHHhCCC-CC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcc
Confidence 567999999999999874 44 35789999999999999999999999999999999999999999999999999995
Q ss_pred -CCcEEcccCCCCCCccccHHHHHHHh-hcC
Q 033710 85 -LGRICLDILKDKWSPALQIRTVLLRY-CEL 113 (113)
Q Consensus 85 -~G~icl~~l~~~W~p~~~i~~il~~i-~~l 113 (113)
+|.||+++|.++|+|++++++||++| ++|
T Consensus 88 ~~G~iCl~iL~~~W~p~~~i~~vL~sil~~l 118 (171)
T 1yf9_A 88 RSGSVCLDVINQTWTPMYQLENIFDVFLPQL 118 (171)
T ss_dssp TTCBBCHHHHHHHCCTTCCTHHHHHTHHHHH
T ss_pred cCCeEeccccccCCCCCCcHHHHHHHHHHHH
Confidence 99999999999999999999999987 543
No 48
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=2.1e-39 Score=222.34 Aligned_cols=107 Identities=33% Similarity=0.639 Sum_probs=101.5
Q ss_pred CchHHHHHHHHHHHhcCCCCCeEEE----eCCCCCc---EEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecc
Q 033710 4 SNLPRRIIKETQRLLSEPAPGISAS----PSEDNMR---YFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTK 76 (113)
Q Consensus 4 ~~~~~RL~~E~~~l~~~~~~gi~~~----~~~~~~~---~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~ 76 (113)
.++.+||++|+++++ +++|+++. ++++|++ +|+++|. |++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 28 s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 104 (190)
T 3o2u_A 28 SAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKK 104 (190)
T ss_dssp CHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSC
T ss_pred cHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecC
Confidence 557899999999998 77899998 8899999 9999997 788999999999999999999999999999999
Q ss_pred CccceeeCCCcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 77 IYHPNIDKLGRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 77 i~HPnv~~~G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
+|||||+.+|.||+++|.++|+|++++++||++|++|
T Consensus 105 i~HPnV~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~l 141 (190)
T 3o2u_A 105 IFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFL 141 (190)
T ss_dssp CCCTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHH
T ss_pred cccCCCCCCCeEechhccCCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999874
No 49
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=3.7e-40 Score=225.38 Aligned_cols=111 Identities=19% Similarity=0.371 Sum_probs=104.4
Q ss_pred CCchHHHHHHHHHHHhcCC---CCCeEEEeCCCCCcEEEEEEEcC-CCCCCCC-----------CEEEEEEeCCCCCCCC
Q 033710 3 NSNLPRRIIKETQRLLSEP---APGISASPSEDNMRYFNVMILGP-TQSPYEG-----------GVFKLELFLPEEYPMA 67 (113)
Q Consensus 3 ~~~~~~RL~~E~~~l~~~~---~~gi~~~~~~~~~~~w~~~i~gp-~~t~y~g-----------~~f~~~i~f~~~YP~~ 67 (113)
+.++.+||++|+++|++++ +.|+++.+.++|+++|+++|.|| ++|||+| |.|+++|.||++||++
T Consensus 25 s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~ 104 (186)
T 1zuo_A 25 SVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFD 104 (186)
T ss_dssp CHHHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSS
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCCC
Confidence 3457799999999999988 68899999999999999999998 9999998 8999999999999999
Q ss_pred CCeEEEeccCccc-eeeCCCcEEcccCC-CCCCccccHHHHHHHhhcC
Q 033710 68 APKVRFLTKIYHP-NIDKLGRICLDILK-DKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 68 pP~v~f~t~i~HP-nv~~~G~icl~~l~-~~W~p~~~i~~il~~i~~l 113 (113)
||+|+|.+++||| ||+.+|.||+++|. ++|+|+++|++||++|++|
T Consensus 105 PP~V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~~ti~~VL~sI~sl 152 (186)
T 1zuo_A 105 PPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINAT 152 (186)
T ss_dssp CCEEEEEESCEESTTBCGGGBBCCGGGSTTTCCTTSCHHHHHHHHHHH
T ss_pred CCeEEEeCCccCCCccCCCCcEEeccCCCCCCCCcCcHHHHHHHHHHH
Confidence 9999999999999 69999999999996 7999999999999999874
No 50
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=2.1e-39 Score=243.15 Aligned_cols=109 Identities=49% Similarity=0.881 Sum_probs=106.0
Q ss_pred chHHHHHHHHHHHhcCCCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCccceeeC
Q 033710 5 NLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK 84 (113)
Q Consensus 5 ~~~~RL~~E~~~l~~~~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HPnv~~ 84 (113)
.+.|||++|++++++++++|+++.|.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 3 ~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 82 (399)
T 4ddg_A 3 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 82 (399)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 85 LGRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 85 ~G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
+|.||+++|.++|+|++++++||++|++|
T Consensus 83 ~G~iCl~il~~~W~p~~~i~~vL~~i~~l 111 (399)
T 4ddg_A 83 NGSISLDILRSQWSPALTISKVLLSICSL 111 (399)
T ss_dssp TCBBCCGGGTTSCCTTCCHHHHHHHHHHH
T ss_pred CCeEeCcccccCCCccccHHHHHHHHHHH
Confidence 99999999999999999999999999874
No 51
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=3e-38 Score=230.24 Aligned_cols=111 Identities=29% Similarity=0.652 Sum_probs=103.3
Q ss_pred CCchHHHHHHHHHHHhcCCCC----CeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecc--
Q 033710 3 NSNLPRRIIKETQRLLSEPAP----GISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTK-- 76 (113)
Q Consensus 3 ~~~~~~RL~~E~~~l~~~~~~----gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~-- 76 (113)
+..+.+||++|+++|++++++ ++.+.++++|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 74 s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g 153 (323)
T 3ceg_A 74 SAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGG 153 (323)
T ss_dssp CHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTT
T ss_pred CHHHHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCC
Confidence 346789999999999998776 45677889999999999999999999999999999999999999999999998
Q ss_pred ---CccceeeCCCcEEcccCC-------CCCCccc-cHHHHHHHhhcC
Q 033710 77 ---IYHPNIDKLGRICLDILK-------DKWSPAL-QIRTVLLRYCEL 113 (113)
Q Consensus 77 ---i~HPnv~~~G~icl~~l~-------~~W~p~~-~i~~il~~i~~l 113 (113)
+|||||+.+|.||+++|. ++|+|++ +|++||++||+|
T Consensus 154 ~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsL 201 (323)
T 3ceg_A 154 HSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSL 201 (323)
T ss_dssp TTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHH
T ss_pred CcccccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHH
Confidence 999999999999999997 6899999 899999999975
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.97 E-value=4.6e-32 Score=180.21 Aligned_cols=96 Identities=18% Similarity=0.277 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHhcCCCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCC----------EEEEEEeCCCCCCCCCCeEEEecc
Q 033710 7 PRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGG----------VFKLELFLPEEYPMAAPKVRFLTK 76 (113)
Q Consensus 7 ~~RL~~E~~~l~~~~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~----------~f~~~i~f~~~YP~~pP~v~f~t~ 76 (113)
.+||++|++.|++ ++.+.++|++.|.+.+.||++|+|+|| .|++++.||++||.+||+|+|.+.
T Consensus 34 ~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~ 107 (172)
T 2z6o_A 34 VQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPEL 107 (172)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred HHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCC
Confidence 7899999999999 467778899999999999999999999 999999999999999999999997
Q ss_pred -CccceeeCCCcEEcccCC-C---CCCccccHHHHHH
Q 033710 77 -IYHPNIDKLGRICLDILK-D---KWSPALQIRTVLL 108 (113)
Q Consensus 77 -i~HPnv~~~G~icl~~l~-~---~W~p~~~i~~il~ 108 (113)
+||||||.+|+||+++|+ + .|+|+++|.++|.
T Consensus 108 ~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 108 DGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp TTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHHH
T ss_pred CCCCCCCCCCCcEechhhccccccccCCccCHHHHHh
Confidence 999999999999999994 3 4569999999984
No 53
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.84 E-value=8e-23 Score=133.35 Aligned_cols=96 Identities=19% Similarity=0.312 Sum_probs=80.2
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCC----------EEEEEEeCCCCCCCCCCeEEEec
Q 033710 6 LPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGG----------VFKLELFLPEEYPMAAPKVRFLT 75 (113)
Q Consensus 6 ~~~RL~~E~~~l~~~~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~----------~f~~~i~f~~~YP~~pP~v~f~t 75 (113)
-..||.+|++.|.+ +++...++-..|...+.||++|+|+|+ .|++++.||.+||.+||.|+|.+
T Consensus 35 w~~RlkeEy~alI~------yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~ 108 (168)
T 3kpa_A 35 WTARLKEEYASLIT------YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPE 108 (168)
T ss_dssp HHHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGG
T ss_pred HHHHHHHHHHHHHH------HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeeccc
Confidence 35799999999987 555555566789999999999999999 89999999999999999999999
Q ss_pred c-CccceeeCCCcEEcccCC----CCCCccccHHHHH
Q 033710 76 K-IYHPNIDKLGRICLDILK----DKWSPALQIRTVL 107 (113)
Q Consensus 76 ~-i~HPnv~~~G~icl~~l~----~~W~p~~~i~~il 107 (113)
. .+|||+|++|+||++++. ..-.|.++|...|
T Consensus 109 ldgkt~kmYr~GkICLdIhwkPlW~~n~P~fGiahal 145 (168)
T 3kpa_A 109 LEGKTVKMYRGGKICMTTHFFPLWARNVPYFGISHVL 145 (168)
T ss_dssp GTTTCSSEETTTEECCCTTHHHHHHHTTTTCCHHHHH
T ss_pred ccCcCccccCCCcEEeccccchhhHhcCCchhHHHHH
Confidence 5 899999999999999972 1224455666654
No 54
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.82 E-value=5.5e-20 Score=122.72 Aligned_cols=106 Identities=23% Similarity=0.403 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHhc-CCC--CCeEEEeCCCCCcEEEEEEEcCCCCCCCCCE---EEEEEeCCCCCCCCCCeEEEecc----
Q 033710 7 PRRIIKETQRLLS-EPA--PGISASPSEDNMRYFNVMILGPTQSPYEGGV---FKLELFLPEEYPMAAPKVRFLTK---- 76 (113)
Q Consensus 7 ~~RL~~E~~~l~~-~~~--~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~---f~~~i~f~~~YP~~pP~v~f~t~---- 76 (113)
.+|..+|+.++.+ .+. +...+...++...++-+.+.|.-.++|+|+. |.+.|.||++||++||.|.|.++
T Consensus 30 ~~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m 109 (162)
T 3r3q_A 30 GRTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDM 109 (162)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCT
T ss_pred hhHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccc
Confidence 3577788877654 332 3333455667777788888887789999998 88999999999999999988651
Q ss_pred ------Cc-cceeeCCCcEEcccCCCCCCc-cccHHHHHHHhhcC
Q 033710 77 ------IY-HPNIDKLGRICLDILKDKWSP-ALQIRTVLLRYCEL 113 (113)
Q Consensus 77 ------i~-HPnv~~~G~icl~~l~~~W~p-~~~i~~il~~i~~l 113 (113)
++ ||||+.+|+||++.|. +|+| +.++.++|.+|+++
T Consensus 110 ~~~~~~I~~hpnVD~~G~I~lpyL~-~W~p~~s~L~~ll~~l~~l 153 (162)
T 3r3q_A 110 NTISSSLPIQEYIDSNGWIALPILH-AWDPAAMNLIMVVQELMSL 153 (162)
T ss_dssp TTSCTTSTHHHHBCTTSBBCCGGGG-SCCGGGCCHHHHHHHHHHT
T ss_pred cccccccCCCCCCCCCCcEeCcccc-cCCCCcCcHHHHHHHHHHH
Confidence 67 9999999999999995 6999 68999999999875
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.60 E-value=1.1e-15 Score=100.30 Aligned_cols=98 Identities=18% Similarity=0.354 Sum_probs=75.2
Q ss_pred HHHHHHHHHhc-CCCCCeEEE---eCCCCCcEEEEEEEcCCCCCCCCCEEE--EEEeCCCCCCCCCCeEEEecc------
Q 033710 9 RIIKETQRLLS-EPAPGISAS---PSEDNMRYFNVMILGPTQSPYEGGVFK--LELFLPEEYPMAAPKVRFLTK------ 76 (113)
Q Consensus 9 RL~~E~~~l~~-~~~~gi~~~---~~~~~~~~w~~~i~gp~~t~y~g~~f~--~~i~f~~~YP~~pP~v~f~t~------ 76 (113)
+..+|..++.+ -+.-..... -...++..|.++|. .+|+|+.|. +.|.||++||++||.| |.++
T Consensus 24 ~t~~dv~~vl~~yp~L~p~~~~y~G~~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I 98 (146)
T 3obq_A 24 LTVRETVNVITLYKDLKPVLDSYGTGSRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTI 98 (146)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEESSSTTCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEE
T ss_pred hhHHHHHHHHHhCCCCceEeeeeeCChheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEE
Confidence 34556666543 332111222 23468999999997 689999998 4999999999999999 6655
Q ss_pred CccceeeCCCcEEcccCCCCCCc-cccHHHHHHHhhc
Q 033710 77 IYHPNIDKLGRICLDILKDKWSP-ALQIRTVLLRYCE 112 (113)
Q Consensus 77 i~HPnv~~~G~icl~~l~~~W~p-~~~i~~il~~i~~ 112 (113)
..||||+.+|++|++.|.+ |++ ..++.+++..+++
T Consensus 99 ~~~~~Vd~~G~i~lpyL~~-W~~~~snL~~ll~~l~~ 134 (146)
T 3obq_A 99 KTGKHVDANGKIYLPYLHE-WKHPQSDLLGLIQVMIV 134 (146)
T ss_dssp CCBTTBCTTCBBCCHHHHT-CCTTTCCHHHHHHHHHH
T ss_pred CCCCCCCCCCCEecccccc-cCCCCCCHHHHHHHHHH
Confidence 4899999999999999964 987 7899999988875
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.16 E-value=0.0045 Score=38.78 Aligned_cols=68 Identities=18% Similarity=0.180 Sum_probs=43.9
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEec
Q 033710 6 LPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLT 75 (113)
Q Consensus 6 ~~~RL~~E~~~l~~~~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t 75 (113)
...+...|+..|+.-=+..+.+ ..+....+.+.+..-.+..-+.-.+.+.+.+|++||.+||.+.+.+
T Consensus 11 ~~e~q~~EleaL~sIy~d~~~~--~~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 11 YGEEQRNELEALESIYPDSFTV--LSENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEE--CCSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred hHHHHHHHHHHHHHHccCceEE--ccCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 4456788888887533334443 2223456666665222222234478899999999999999998765
No 57
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=96.93 E-value=0.013 Score=37.07 Aligned_cols=67 Identities=13% Similarity=0.187 Sum_probs=41.4
Q ss_pred HHHHHHHHHHhcCCCCCeEEEeCC------CCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEec
Q 033710 8 RRIIKETQRLLSEPAPGISASPSE------DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLT 75 (113)
Q Consensus 8 ~RL~~E~~~l~~~~~~gi~~~~~~------~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t 75 (113)
.+-..|+..|+.-=...+.+.... +....+.+.+....+ .-..-.+.+.+.+|++||.+||.|.+.+
T Consensus 13 e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 13 EIQCNELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp HHHHHHHHHHHTTSSSSEECCSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred HHHHHHHHHHHHHChhhheecccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 355677777765322233322111 124567777773222 2123478899999999999999998865
No 58
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=96.92 E-value=0.0078 Score=37.66 Aligned_cols=70 Identities=17% Similarity=0.159 Sum_probs=43.2
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEEeCC--CCCcEEEEEEEcCCCCCC--CCCEEEEEEeCCCCCCCCCCeEEEec
Q 033710 6 LPRRIIKETQRLLSEPAPGISASPSE--DNMRYFNVMILGPTQSPY--EGGVFKLELFLPEEYPMAAPKVRFLT 75 (113)
Q Consensus 6 ~~~RL~~E~~~l~~~~~~gi~~~~~~--~~~~~w~~~i~gp~~t~y--~g~~f~~~i~f~~~YP~~pP~v~f~t 75 (113)
...+...|+..|+.-=...+...... .+...+.+.+..+.+..- ..-.+.+.+.+|++||..+|.|...+
T Consensus 9 ~~e~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 9 EDWVLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp CCCHHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEE
T ss_pred hHHHHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEc
Confidence 33467889988875333444443221 234455555642222111 12468899999999999999998876
No 59
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=95.98 E-value=0.076 Score=35.74 Aligned_cols=79 Identities=16% Similarity=0.298 Sum_probs=57.1
Q ss_pred HHHHHHHHHHhcCCCCCeE-EEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEeccCccceeeCCC
Q 033710 8 RRIIKETQRLLSEPAPGIS-ASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLG 86 (113)
Q Consensus 8 ~RL~~E~~~l~~~~~~gi~-~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~i~HPnv~~~G 86 (113)
.+|.+|+.++ |+. +.-.+.++....+.+... .|....+++.++.+||.++|.+...-+. |.
T Consensus 4 ~~li~Ei~~i------GW~~l~~id~~~~~i~l~~~D~-----~gR~H~l~v~l~~~yp~~~P~~~~DlP~--~~----- 65 (186)
T 3zqs_A 4 SSLIEEIGTL------GWDKLVYADTCFSTIKLKAEDA-----SGREHLITLKLKAKYPAESPDYFVDFPV--PF----- 65 (186)
T ss_dssp CSHHHHHHHH------CGGGEEEECTTSSEEEEEEECT-----TSCEEEEEEECCTTTTTSCCEEECCCSS--CC-----
T ss_pred HHHHHHHHHh------CCceeeeecCCccEEEEEEEeC-----CCCeEEEEEEECCCCCCCCCeeEEcCCC--Cc-----
Confidence 3688899888 442 333356788888888732 3678899999999999999977544322 11
Q ss_pred cEEcccCCCCCCccccHHHHHHHhh
Q 033710 87 RICLDILKDKWSPALQIRTVLLRYC 111 (113)
Q Consensus 87 ~icl~~l~~~W~p~~~i~~il~~i~ 111 (113)
.-.|+|..++.+++.+++
T Consensus 66 -------~~~w~~~ssL~~v~~qF~ 83 (186)
T 3zqs_A 66 -------CASWTPQSSLISIYSQFL 83 (186)
T ss_dssp -------CCCCCTTCCHHHHHHHHH
T ss_pred -------ccccCCCccHHHHHHHHH
Confidence 137999999999887654
No 60
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=95.50 E-value=0.14 Score=32.07 Aligned_cols=69 Identities=16% Similarity=0.186 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEEeCCC-----CCcEEEEEEEcCCC-C-CCCCCEEEEEEeCCCCCCCCCCeEEEec
Q 033710 6 LPRRIIKETQRLLSEPAPGISASPSED-----NMRYFNVMILGPTQ-S-PYEGGVFKLELFLPEEYPMAAPKVRFLT 75 (113)
Q Consensus 6 ~~~RL~~E~~~l~~~~~~gi~~~~~~~-----~~~~w~~~i~gp~~-t-~y~g~~f~~~i~f~~~YP~~pP~v~f~t 75 (113)
...+...|+..|+.-=...+....... ....+.+.+. +.+ . .-..-.+.+.|.||++||.++|.|.+.+
T Consensus 11 ~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 11 YSQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp HHHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred hHHHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 345667888888753233343322111 1345666665 221 1 1112468999999999999999998743
No 61
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.20 E-value=0.092 Score=32.69 Aligned_cols=67 Identities=18% Similarity=0.164 Sum_probs=40.4
Q ss_pred HHHHHHHHHHhcC-CC-CCeEE-EeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEec
Q 033710 8 RRIIKETQRLLSE-PA-PGISA-SPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLT 75 (113)
Q Consensus 8 ~RL~~E~~~l~~~-~~-~gi~~-~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t 75 (113)
.+...|+..|+.- +. ..+.+ .....+...+.+.+.. .+..-..-.+.+.+.+|.+||..||.+.+.+
T Consensus 10 e~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 79 (128)
T 2ebk_A 10 EPVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKA-EGFMDADIPLELVFHLPVNYPSCLPGISINS 79 (128)
T ss_dssp HHHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEEC-CTTTTCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred HHHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecC-CCCCCCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence 4567788777642 21 12322 1112234577777763 2211113478999999999999999987654
No 62
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=92.61 E-value=0.11 Score=33.59 Aligned_cols=24 Identities=21% Similarity=0.342 Sum_probs=21.7
Q ss_pred EEEEEEeCCCCCCCCCCeEEEecc
Q 033710 53 VFKLELFLPEEYPMAAPKVRFLTK 76 (113)
Q Consensus 53 ~f~~~i~f~~~YP~~pP~v~f~t~ 76 (113)
.+.++|.+|.+||..+|.|...+.
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~~ 99 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRSS 99 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEECS
T ss_pred eEEEEEEcCCCCCCCCCcEEEEeC
Confidence 789999999999999999987763
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=92.19 E-value=0.093 Score=33.75 Aligned_cols=25 Identities=28% Similarity=0.595 Sum_probs=21.5
Q ss_pred CEEEEEEeCCCCCCCCCCeEEEecc
Q 033710 52 GVFKLELFLPEEYPMAAPKVRFLTK 76 (113)
Q Consensus 52 ~~f~~~i~f~~~YP~~pP~v~f~t~ 76 (113)
-.+.+.+.+|.+||..||.+.....
T Consensus 73 ~~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 73 AMFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEEECSSTTSSCCCCEEECT
T ss_pred ceEEEEEECCCCCCCCCCeEEEEcc
Confidence 3588999999999999999987763
No 64
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=91.09 E-value=0.16 Score=22.39 Aligned_cols=24 Identities=21% Similarity=0.328 Sum_probs=19.8
Q ss_pred CCCchHHHHHHHHHHHhcCCCCCe
Q 033710 2 ANSNLPRRIIKETQRLLSEPAPGI 25 (113)
Q Consensus 2 a~~~~~~RL~~E~~~l~~~~~~gi 25 (113)
++.+...||+-|+..++.+|+.|.
T Consensus 2 snlseldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 2 SNLSELDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred CcHHHHHHHHHHHhhhccCCCCCC
Confidence 355667899999999999998874
No 65
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=47.49 E-value=20 Score=24.19 Aligned_cols=26 Identities=19% Similarity=0.539 Sum_probs=22.5
Q ss_pred CCCCEEEEEEeCCCCCCC-----CCCeEEEe
Q 033710 49 YEGGVFKLELFLPEEYPM-----AAPKVRFL 74 (113)
Q Consensus 49 y~g~~f~~~i~f~~~YP~-----~pP~v~f~ 74 (113)
-+.|.|.|+-.+|--||. .||.|+|.
T Consensus 108 d~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 108 FGTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 346889999999999998 89999886
No 66
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=45.62 E-value=62 Score=21.27 Aligned_cols=44 Identities=16% Similarity=0.308 Sum_probs=31.1
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCCCCCeEEEecc
Q 033710 31 EDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTK 76 (113)
Q Consensus 31 ~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~~pP~v~f~t~ 76 (113)
++.-+.|.+.+.|+.+.--..-.=++.+.+.+.||. |...+..+
T Consensus 29 ~~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~P 72 (175)
T 3rls_A 29 AEHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAP 72 (175)
T ss_dssp TTCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSS
T ss_pred CCCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCC
Confidence 346789999999887654444566788889999974 55555444
No 67
>2c5k_P Vacuolar protein sorting protein 51; protein transport/complex, snare, VFT complex, protein transport, phosphorylation; 2.05A {Saccharomyces cerevisiae}
Probab=44.19 E-value=11 Score=16.89 Aligned_cols=14 Identities=21% Similarity=0.299 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHhcC
Q 033710 7 PRRIIKETQRLLSE 20 (113)
Q Consensus 7 ~~RL~~E~~~l~~~ 20 (113)
.|++++|+..|+.+
T Consensus 12 KR~lLkeyY~L~~~ 25 (26)
T 2c5k_P 12 RRLLLREFYNLENX 25 (26)
T ss_dssp HHHHHHHHHHC---
T ss_pred HHHHHHHHHhhhcc
Confidence 46788999888653
No 68
>2rf4_B DNA-directed RNA polymerase I subunit RPA4; transferase DNA/RNA, DNA-binding, phosphorylation, POL I, POLI, rpoli, nuclear protein; 3.10A {Saccharomyces cerevisiae}
Probab=38.17 E-value=15 Score=21.44 Aligned_cols=13 Identities=23% Similarity=0.365 Sum_probs=10.1
Q ss_pred chHHHHHHHHHHH
Q 033710 5 NLPRRIIKETQRL 17 (113)
Q Consensus 5 ~~~~RL~~E~~~l 17 (113)
+..||+++||+=|
T Consensus 62 sQLKRvQRdlrGL 74 (87)
T 2rf4_B 62 SQLKRIQRDFKGL 74 (87)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHhhcCC
Confidence 4578999998765
No 69
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=37.79 E-value=23 Score=15.36 Aligned_cols=12 Identities=33% Similarity=0.476 Sum_probs=8.9
Q ss_pred hHHHHHHHHHHH
Q 033710 6 LPRRIIKETQRL 17 (113)
Q Consensus 6 ~~~RL~~E~~~l 17 (113)
.++.|.+|+++-
T Consensus 9 lqkkirkelkqr 20 (26)
T 1m46_B 9 LQKKIRKELKQR 20 (26)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 467888998763
No 70
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=37.75 E-value=23 Score=17.43 Aligned_cols=15 Identities=27% Similarity=0.350 Sum_probs=11.7
Q ss_pred chHHHHHHHHHHHhc
Q 033710 5 NLPRRIIKETQRLLS 19 (113)
Q Consensus 5 ~~~~RL~~E~~~l~~ 19 (113)
+..+|+..|++++.+
T Consensus 28 ~~~~~~~~~~~~~~~ 42 (42)
T 3g9r_A 28 SKIKRIENEIKRIKK 42 (42)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcC
Confidence 456899999998753
No 71
>3pft_A Flavin reductase; desulfurization, oxidoreductase; HET: FMN; 1.60A {Mycobacterium goodii} SCOP: b.45.1.0
Probab=35.92 E-value=18 Score=22.85 Aligned_cols=30 Identities=20% Similarity=0.459 Sum_probs=23.8
Q ss_pred CCCCeEEEec---cCccceeeCCCcEEcccCCC
Q 033710 66 MAAPKVRFLT---KIYHPNIDKLGRICLDILKD 95 (113)
Q Consensus 66 ~~pP~v~f~t---~i~HPnv~~~G~icl~~l~~ 95 (113)
.+||.|.+.- .--|+++..+|.+|+++|.+
T Consensus 42 ~~PP~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~ 74 (157)
T 3pft_A 42 LEPPLVAFAVQNSSTTWPKLKDLPSLGISVLGE 74 (157)
T ss_dssp TTTTEEEEEEETTCSSHHHHTTSSCEEEEECBT
T ss_pred CCCcEEEEEECCCCchHHHHHhCCEEEEEECCH
Confidence 3689888853 35688999999999999964
No 72
>2cu9_A Spcia1, histone chaperone CIA1; immunoglobulin fold, structural genomics, NPPSFA; 1.80A {Schizosaccharomyces pombe} SCOP: b.1.22.1 PDB: 2dze_A* 2z34_A 2z3f_A
Probab=35.41 E-value=54 Score=21.29 Aligned_cols=38 Identities=13% Similarity=0.128 Sum_probs=25.8
Q ss_pred CCcEEEEEEEcCCC-------------CCCCCCEEEEEEeCCCCCCCCCCe
Q 033710 33 NMRYFNVMILGPTQ-------------SPYEGGVFKLELFLPEEYPMAAPK 70 (113)
Q Consensus 33 ~~~~w~~~i~gp~~-------------t~y~g~~f~~~i~f~~~YP~~pP~ 70 (113)
+-.+|+++..|..+ +|-.-|.++|.+.-+.=.+.+-|.
T Consensus 36 ~dlewkliYVgSa~s~~~DQ~Ld~v~VGPi~~G~~kFv~~adpPd~~~IP~ 86 (161)
T 2cu9_A 36 SDLEWKLTYVGSATSQSYDQILDTLLVGPIPIGINKFVFEADPPNIDLLPQ 86 (161)
T ss_dssp SCEEEEEEEESSTTSCCCEEEEEEEEECSCCSEEEEEEEEECCCCGGGSSC
T ss_pred CCeEEEEEEEcCCCCccCCeEeeEEEECCccceEEEEEEEcCCCChhHCCC
Confidence 44599999998665 466678888888775444444443
No 73
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=30.73 E-value=33 Score=23.71 Aligned_cols=25 Identities=20% Similarity=0.559 Sum_probs=21.7
Q ss_pred CCCEEEEEEeCCCCCC-------CCCCeEEEe
Q 033710 50 EGGVFKLELFLPEEYP-------MAAPKVRFL 74 (113)
Q Consensus 50 ~g~~f~~~i~f~~~YP-------~~pP~v~f~ 74 (113)
+.|.|.|+-.+|--|| ..||.|+|.
T Consensus 134 ~~G~y~F~TI~Pg~Yp~~~~~~~~RpaHIH~~ 165 (241)
T 2bum_B 134 DNGYYVFRTIKPGPYPWRNRINEWRPAHIHFS 165 (241)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CCceEEEEEecCCccccCCCCCCCcCceEEEE
Confidence 4588999999999998 479999886
No 74
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=29.32 E-value=36 Score=23.49 Aligned_cols=25 Identities=16% Similarity=0.351 Sum_probs=22.0
Q ss_pred CCCEEEEEEeCCCCCCC-------CCCeEEEe
Q 033710 50 EGGVFKLELFLPEEYPM-------AAPKVRFL 74 (113)
Q Consensus 50 ~g~~f~~~i~f~~~YP~-------~pP~v~f~ 74 (113)
+.|.|.|+-.+|--||. .||.|+|.
T Consensus 133 ~~G~y~F~TI~Pg~Yp~p~~~~~~Rp~HIHf~ 164 (238)
T 3t63_M 133 SDGYYSFRTIKPGPAPWRNGPNDWRPAHIYFG 164 (238)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CCceEEEEEECCcCccCCCCCCCCcCCeEEEE
Confidence 45899999999999996 79999886
No 75
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=29.09 E-value=35 Score=24.55 Aligned_cols=25 Identities=16% Similarity=0.305 Sum_probs=21.1
Q ss_pred CCCEEEEEEeCCCCCC------------------CCCCeEEEe
Q 033710 50 EGGVFKLELFLPEEYP------------------MAAPKVRFL 74 (113)
Q Consensus 50 ~g~~f~~~i~f~~~YP------------------~~pP~v~f~ 74 (113)
+.|.|.|+-.+|--|| ..||.|.|.
T Consensus 187 ~~G~y~F~TI~Pg~Y~ip~dGp~G~lL~~~grh~~RpaHIH~~ 229 (312)
T 2xsu_A 187 VNGKYVALTTMPVGYGCPPEGTTQALLNKLGRHGNRPSHVHYF 229 (312)
T ss_dssp TTSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CCceEEEEEECcCcccCCCCCcHHHHHHHhhccCCCCceEEEE
Confidence 4588999999999998 578998886
No 76
>3kxt_A Chromatin protein CREN7; protein-DNA complex, crenarchaea chromatin protein, minor-GR binding, methylation; 1.60A {Sulfolobus solfataricus} PDB: 2jtm_A 3lwh_A* 3lwi_A*
Probab=28.83 E-value=70 Score=16.89 Aligned_cols=11 Identities=36% Similarity=0.972 Sum_probs=8.9
Q ss_pred EEEeCCCCCCC
Q 033710 56 LELFLPEEYPM 66 (113)
Q Consensus 56 ~~i~f~~~YP~ 66 (113)
|+-.+|++||.
T Consensus 46 fR~k~pddy~~ 56 (56)
T 3kxt_A 46 FRHKLPDDYPI 56 (56)
T ss_dssp EEEECCTTCCC
T ss_pred eeeeCcCcCCC
Confidence 56788999984
No 77
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=28.15 E-value=37 Score=24.17 Aligned_cols=25 Identities=28% Similarity=0.607 Sum_probs=21.3
Q ss_pred CCCEEEEEEeCCCCCC------------------CCCCeEEEe
Q 033710 50 EGGVFKLELFLPEEYP------------------MAAPKVRFL 74 (113)
Q Consensus 50 ~g~~f~~~i~f~~~YP------------------~~pP~v~f~ 74 (113)
+.|.|.|+-.+|--|| ..||.|+|.
T Consensus 183 ~~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~ 225 (293)
T 1tmx_A 183 PDGGYAFWAITPTPYPIPHDGPVGRMLAATGRSPMRASHLHFM 225 (293)
T ss_dssp TTSEEEEEEECCCCEECCCSSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CCceEEEEEECCCcccCCCCCchHHHHHhcccCCCCCceEEEE
Confidence 4688999999999998 459999886
No 78
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A
Probab=28.06 E-value=1.2e+02 Score=19.20 Aligned_cols=43 Identities=14% Similarity=0.240 Sum_probs=31.7
Q ss_pred CcEEE--EEEEcCCCCCCC-CCEEEEEEeCCCCCCCCCCeEEEeccCc
Q 033710 34 MRYFN--VMILGPTQSPYE-GGVFKLELFLPEEYPMAAPKVRFLTKIY 78 (113)
Q Consensus 34 ~~~w~--~~i~gp~~t~y~-g~~f~~~i~f~~~YP~~pP~v~f~t~i~ 78 (113)
...|. +.+.|+++.... .-.=++.+.+.+.|+ .|...+..+.|
T Consensus 32 ~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~--np~r~v~~pPF 77 (140)
T 3qrl_A 32 VRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFA--NPNRTFTDPPF 77 (140)
T ss_dssp CEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSS--SCEEEECSTTC
T ss_pred ccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCC--CCeEEEcCCCc
Confidence 46998 788898887554 455668888889887 47777776644
No 79
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=27.90 E-value=37 Score=24.38 Aligned_cols=25 Identities=20% Similarity=0.498 Sum_probs=21.2
Q ss_pred CCCEEEEEEeCCCCCC------------------CCCCeEEEe
Q 033710 50 EGGVFKLELFLPEEYP------------------MAAPKVRFL 74 (113)
Q Consensus 50 ~g~~f~~~i~f~~~YP------------------~~pP~v~f~ 74 (113)
+.|.|.|+-.+|--|| ..||.|+|.
T Consensus 183 ~~G~y~F~TI~Pg~Y~~p~dGp~g~lL~~~grh~~RpaHIHf~ 225 (311)
T 2azq_A 183 AEGRYRARSIVPSGYGCDPQGPTQECLDLLGRHGQRPAHVHFF 225 (311)
T ss_dssp TTCEEEEEEECCCCEECCTTSHHHHHHHHHTCCCEECCEEEEE
T ss_pred CCceEEEEEEcCCCcCCCCCCcHHHHHHhhhccCCCCceEEEE
Confidence 3488999999999998 469999986
No 80
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=26.89 E-value=44 Score=22.34 Aligned_cols=23 Identities=26% Similarity=0.371 Sum_probs=20.7
Q ss_pred CEEEEEEeCCCCCCCC-----CCeEEEe
Q 033710 52 GVFKLELFLPEEYPMA-----APKVRFL 74 (113)
Q Consensus 52 ~~f~~~i~f~~~YP~~-----pP~v~f~ 74 (113)
|.|.|+=.+|--||.. ||.|+|.
T Consensus 102 G~~~F~TI~Pg~Y~~~~g~~rp~HIH~~ 129 (200)
T 3t63_A 102 GEWTLHTVKPGVVNNAAGVPMAPHINIS 129 (200)
T ss_dssp CSEEEEEECCCCEECTTSCEECSCEEEE
T ss_pred CEEEEEEECCcCcCCCCCCccCCEEEEE
Confidence 8899999999999987 8888886
No 81
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=26.80 E-value=41 Score=23.93 Aligned_cols=25 Identities=24% Similarity=0.672 Sum_probs=21.3
Q ss_pred CCCEEEEEEeCCCCCCC------------------CCCeEEEe
Q 033710 50 EGGVFKLELFLPEEYPM------------------AAPKVRFL 74 (113)
Q Consensus 50 ~g~~f~~~i~f~~~YP~------------------~pP~v~f~ 74 (113)
+.|.|.|+=.+|--||. .||.|+|.
T Consensus 180 ~~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~ 222 (290)
T 3n9t_A 180 NDGCFAIQTTVPVCYPIPTDGPVGEMLDAANRHAWRPAHLHFM 222 (290)
T ss_dssp TTSEEEEEEECCCCEECCCSSHHHHHHHHHTCCCEECCEEEEE
T ss_pred CCceEEEEEeCCCCcCCCCCCcHHHHHHhccCCCCcCceEEEE
Confidence 44889999999999994 68999886
No 82
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=26.72 E-value=42 Score=23.38 Aligned_cols=25 Identities=24% Similarity=0.592 Sum_probs=20.7
Q ss_pred CCCEEEEEEeCCCCCC------------------CCCCeEEEe
Q 033710 50 EGGVFKLELFLPEEYP------------------MAAPKVRFL 74 (113)
Q Consensus 50 ~g~~f~~~i~f~~~YP------------------~~pP~v~f~ 74 (113)
+.|.|.|+-.+|--|| ..||.|+|.
T Consensus 153 ~~G~y~F~TI~Pg~Y~~p~dGp~G~ll~~~grh~~RpaHIH~~ 195 (254)
T 2boy_A 153 ENGRFTLRTIVPAPYEIPKNGPTGALLAAAGWHAWRPAHLHWI 195 (254)
T ss_dssp TTSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CCceEEEEEECCccccCCCCCcHHHHHHhcccccCCCceEEEE
Confidence 3588999999998887 478999886
No 83
>2ecu_A Flavin reductase (HPAC) of 4-hydroxyphenylacetate monooxygnease; flavin diffusible, two-component monooxyge oxidoreductase; HET: 1PG 12P; 1.30A {Thermus thermophilus} PDB: 2ecr_A* 2ed4_A*
Probab=26.61 E-value=16 Score=22.86 Aligned_cols=31 Identities=16% Similarity=0.391 Sum_probs=24.4
Q ss_pred CCCCeEEEec---cCccceeeCCCcEEcccCCCC
Q 033710 66 MAAPKVRFLT---KIYHPNIDKLGRICLDILKDK 96 (113)
Q Consensus 66 ~~pP~v~f~t---~i~HPnv~~~G~icl~~l~~~ 96 (113)
.+||.|.+.- .--|+++..+|.+|+++|.++
T Consensus 40 ~~Pp~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~ 73 (149)
T 2ecu_A 40 LEPPLVALAVSERAKLLPVLEGAGAFTVSLLREG 73 (149)
T ss_dssp TTTTEEEEEEETTCTHHHHHHHHTEEEEEECBTT
T ss_pred CCCCEEEEEECCCChhHHHHHhCCEEEEEECcHH
Confidence 4789988863 346889999999999999644
No 84
>2ccv_A Helix pomatia agglutinin; lectin, snail; HET: A2G NAG; 1.30A {Helix pomatia} SCOP: b.154.1.1 PDB: 2cgy_A* 2cgz_A* 2ce6_A
Probab=26.30 E-value=88 Score=18.32 Aligned_cols=24 Identities=13% Similarity=0.138 Sum_probs=19.2
Q ss_pred CCEEEEEEeCCCCCCCCCCeEEEec
Q 033710 51 GGVFKLELFLPEEYPMAAPKVRFLT 75 (113)
Q Consensus 51 g~~f~~~i~f~~~YP~~pP~v~f~t 75 (113)
+..+...|.|+..|+ ++|.|.+--
T Consensus 28 ~R~~~~~V~F~~~F~-~~P~V~v~l 51 (101)
T 2ccv_A 28 TRELAKNITFASPYC-RPPVVLLSI 51 (101)
T ss_dssp CEEEEEEEECSSCCS-SCCEEEEEE
T ss_pred ceEEEEEeEeCcccC-CCCEEEEEe
Confidence 346888899999999 599987753
No 85
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=25.50 E-value=45 Score=23.97 Aligned_cols=25 Identities=20% Similarity=0.600 Sum_probs=21.2
Q ss_pred CCCEEEEEEeCCCCCC------------------CCCCeEEEe
Q 033710 50 EGGVFKLELFLPEEYP------------------MAAPKVRFL 74 (113)
Q Consensus 50 ~g~~f~~~i~f~~~YP------------------~~pP~v~f~ 74 (113)
+.|.|.|+-.+|--|| ..||.|+|.
T Consensus 186 ~~G~y~F~TI~Pg~Yp~p~dgp~g~lL~~~grh~~RpaHIHf~ 228 (311)
T 1dmh_A 186 ENGQYRVRTILPAGYGCPPEGPTQQLLNQLGRHGNRPAHIHYF 228 (311)
T ss_dssp TTSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECSEEEEE
T ss_pred CCceEEEEEEcCCcccCCCCCcHHHHHHhcccCCCCCceEEEE
Confidence 3488999999999997 469999886
No 86
>1roc_A Anti-silencing protein 1; beta-sandwich, replication, chaperone; 1.50A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 2ygv_A
Probab=25.46 E-value=99 Score=19.91 Aligned_cols=30 Identities=17% Similarity=0.225 Sum_probs=21.4
Q ss_pred CCcEEEEEEEcCCC-------------CCCCCCEEEEEEeCCC
Q 033710 33 NMRYFNVMILGPTQ-------------SPYEGGVFKLELFLPE 62 (113)
Q Consensus 33 ~~~~w~~~i~gp~~-------------t~y~g~~f~~~i~f~~ 62 (113)
+-.+|+++..|..+ +|-.-|.++|.+.-+.
T Consensus 37 ~dlewkliYVgSa~s~~~DQ~Ld~v~vGPi~~G~~kFv~~adp 79 (155)
T 1roc_A 37 HDLEWKLTYVGSSRSLDHDQELDSILVGPVPVGVNKFVFSADP 79 (155)
T ss_dssp SCEEEEEEECCCTTSSCTTEEEEEEEECSCCSEEEEEEEEECC
T ss_pred CCcEEEEEEEeCCCcccCceEeeEEEeccccceeEEEEEEcCC
Confidence 34899999988655 3556688888777643
No 87
>1u9d_A Hypothetical protein VC0714; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics; 1.70A {Vibrio cholerae o1 biovar eltor str} SCOP: d.80.1.5
Probab=24.71 E-value=1.2e+02 Score=18.53 Aligned_cols=28 Identities=18% Similarity=0.205 Sum_probs=22.5
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEEeCCCC
Q 033710 6 LPRRIIKETQRLLSEPAPGISASPSEDN 33 (113)
Q Consensus 6 ~~~RL~~E~~~l~~~~~~gi~~~~~~~~ 33 (113)
..+.|..||.++.+-+...++++..+..
T Consensus 32 lS~~Lid~La~i~~~~~e~fTle~i~s~ 59 (122)
T 1u9d_A 32 LVPTLLNELSSLLSTARNAFTFELINTQ 59 (122)
T ss_dssp HHHHHHHHHHHHHTCCGGGCEEEECCCC
T ss_pred HhHHHHHHHHHHHCCCcccEEEEEeeeE
Confidence 3578899999999999999988765543
No 88
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=23.70 E-value=45 Score=23.58 Aligned_cols=24 Identities=13% Similarity=0.451 Sum_probs=20.2
Q ss_pred CCEEEEEEeCCCCCC------------------CCCCeEEEe
Q 033710 51 GGVFKLELFLPEEYP------------------MAAPKVRFL 74 (113)
Q Consensus 51 g~~f~~~i~f~~~YP------------------~~pP~v~f~ 74 (113)
.|.|.|+=.+|--|| ..||.|+|.
T Consensus 183 dG~y~F~TI~Pg~Yp~p~dGp~G~lL~~~grh~~RpaHIH~~ 224 (280)
T 3hhy_A 183 EGRYEITTIQPAPYQIPTDGPTGQFIEAQNGHPWRPAHLHLI 224 (280)
T ss_dssp TSEEEEEEECCCCEECCCSSHHHHHHHHTTCCCEECSCEEEE
T ss_pred CceEEEEEECCcCcCCCCCCcHHHHHHhcCCCCCCCcEEEEE
Confidence 488999999998887 468988886
No 89
>4hx6_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.89A {Streptomyces globisporus}
Probab=23.58 E-value=22 Score=23.17 Aligned_cols=31 Identities=16% Similarity=0.370 Sum_probs=24.1
Q ss_pred CCCCeEEEec---cCccceeeCCCcEEcccCCCC
Q 033710 66 MAAPKVRFLT---KIYHPNIDKLGRICLDILKDK 96 (113)
Q Consensus 66 ~~pP~v~f~t---~i~HPnv~~~G~icl~~l~~~ 96 (113)
.+||.|.|.- .--|.++..+|.+|+++|.++
T Consensus 57 ~~PPlv~v~i~~~~~T~~~i~~~g~F~Vnvl~~~ 90 (185)
T 4hx6_A 57 LSPPLVLICVGKDAVMHQRLTALPTFAVSVLEAG 90 (185)
T ss_dssp TTTTEEEEEEETTSHHHHHHHHSCEEEEEECBTT
T ss_pred CCCCEEEEEECCCcHHHHHHHHCCeEEEEECCHH
Confidence 4789988863 245888999999999999643
No 90
>3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida}
Probab=23.52 E-value=80 Score=22.05 Aligned_cols=25 Identities=20% Similarity=0.461 Sum_probs=19.7
Q ss_pred CCCEEEEEEeCCCCC------------------CCCCCeEEEe
Q 033710 50 EGGVFKLELFLPEEY------------------PMAAPKVRFL 74 (113)
Q Consensus 50 ~g~~f~~~i~f~~~Y------------------P~~pP~v~f~ 74 (113)
+.|.|.|+=.+|.-| |..||.|+|.
T Consensus 150 ~~G~y~F~TI~P~~Ypip~dGp~g~ll~~~gr~~~RpaHIHf~ 192 (260)
T 3th1_A 150 SQGNYRVRTTMPVPYQIPYEGPTGRLLGHLGSHTWRPAHVHFK 192 (260)
T ss_dssp TTSEEEEEEECCCCEECCCSSHHHHHHHHTTCCSEECCEEEEE
T ss_pred CCCEEEEEEECCCCCCCCCCCcHHHHHHhcCCCCCCCCeEEEE
Confidence 348899999999666 4578888886
No 91
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=22.64 E-value=1.3e+02 Score=22.21 Aligned_cols=45 Identities=27% Similarity=0.411 Sum_probs=32.8
Q ss_pred HHHhcCCCCCeEEEeCCCCCcEEEEEEEcCCCCCCCCCEEEEEEeCCCCCCC
Q 033710 15 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPM 66 (113)
Q Consensus 15 ~~l~~~~~~gi~~~~~~~~~~~w~~~i~gp~~t~y~g~~f~~~i~f~~~YP~ 66 (113)
+++..+.-+|.+++..+++-....+++. -+|.+.++++.+|. ||.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~-~~~ 52 (381)
T 3k1l_B 8 ERLLCQKYPGLAAELQPSGACIIRGVLG------SEDTWRRLKLYLPH-HPA 52 (381)
T ss_dssp HHHHHHHCTTEEEEECTTSCEEEEEEEE------ETTEEEEEEEEETB-TTB
T ss_pred HHHHHHhCCceEEEecCCCcEEEEEEEE------ecCceEEEEEccCC-Ccc
Confidence 3334445689999998888665555554 26788999999987 886
No 92
>2k6w_A Putative uncharacterized protein TTHA1943; PCUA, copper transfer protein, metal transport; NMR {Thermus thermophilus} PDB: 2k6y_A 2k6z_A 2k70_A
Probab=22.22 E-value=99 Score=18.74 Aligned_cols=26 Identities=23% Similarity=0.498 Sum_probs=22.7
Q ss_pred EEEEEEcCCCCCCCCCEEEEEEeCCC
Q 033710 37 FNVMILGPTQSPYEGGVFKLELFLPE 62 (113)
Q Consensus 37 w~~~i~gp~~t~y~g~~f~~~i~f~~ 62 (113)
+|+.+.|.+..+-+|..+.+++.|-+
T Consensus 82 ~HvML~gl~~~l~~G~~v~ltL~Fe~ 107 (120)
T 2k6w_A 82 YHFMLLGLKRPLKAGEEVELDLLFAG 107 (120)
T ss_dssp EEEEEEEESSCBCTTCEEEEEEEETT
T ss_pred eEEEEeCCCCCCCCCCEEEEEEEECC
Confidence 68889998888889999999999865
No 93
>2r0x_A Possible flavin reductase; split barrel-like, structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE SO4; 1.06A {Haemophilus somnus 129PT}
Probab=22.19 E-value=19 Score=22.70 Aligned_cols=30 Identities=10% Similarity=0.067 Sum_probs=23.6
Q ss_pred CCCeEEEec---cCccceeeCCCcEEcccCCCC
Q 033710 67 AAPKVRFLT---KIYHPNIDKLGRICLDILKDK 96 (113)
Q Consensus 67 ~pP~v~f~t---~i~HPnv~~~G~icl~~l~~~ 96 (113)
+||.|.+.- .--|+++..+|.+|+++|.++
T Consensus 44 ~Pp~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~ 76 (158)
T 2r0x_A 44 SPPTLLVCINSNARAYEHFVKNRVLMVNTLTAE 76 (158)
T ss_dssp TTEEEEEEEETTSTTHHHHHHHCEEEEEECBTT
T ss_pred CCCEEEEEeCCCChHHHHHHhCCEEEEEeCCHH
Confidence 689888763 346889999999999999643
No 94
>2qck_A Flavin reductase domain protein; YP_831077.1, flavin reducta domain, structural genomics, joint center for structural GE JCSG; 1.90A {Arthrobacter SP}
Probab=21.50 E-value=23 Score=22.61 Aligned_cols=30 Identities=20% Similarity=0.271 Sum_probs=23.9
Q ss_pred CCCCeEEEec---cCccceeeCCCcEEcccCCC
Q 033710 66 MAAPKVRFLT---KIYHPNIDKLGRICLDILKD 95 (113)
Q Consensus 66 ~~pP~v~f~t---~i~HPnv~~~G~icl~~l~~ 95 (113)
.+||.|.+.- .--|+++..+|.+|+++|.+
T Consensus 48 ~~PP~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~ 80 (167)
T 2qck_A 48 AQPPRFTFNMARSSSSWPAIANTTHIGVHMLGL 80 (167)
T ss_dssp ETTEEEEEEEETTSTTHHHHHHCCEEEEEECBG
T ss_pred cCCCEEEEEECCCCchHHHHHhCCeEEEEECcH
Confidence 4789988863 35688999999999999953
No 95
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=21.18 E-value=67 Score=19.61 Aligned_cols=32 Identities=19% Similarity=0.147 Sum_probs=20.8
Q ss_pred eeCCCcEEcccCCCCCCccccHHHHHHHhhcC
Q 033710 82 IDKLGRICLDILKDKWSPALQIRTVLLRYCEL 113 (113)
Q Consensus 82 v~~~G~icl~~l~~~W~p~~~i~~il~~i~~l 113 (113)
|+++|+|-.......+...-++++++..|.+|
T Consensus 125 ID~~G~I~~~~~~~~~~~~~~~~eil~~l~~L 156 (157)
T 4g2e_A 125 IDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSL 156 (157)
T ss_dssp ECTTSBEEEEEEESSTTCCCCHHHHHHHHHHT
T ss_pred ECCCCEEEEEEECCCCCCCCCHHHHHHHHHHh
Confidence 67889886544444555555677887777654
No 96
>2hue_A Anti-silencing protein 1; mini beta sheet, elongated beta sandwhich, DNA binding prote; 1.70A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 1wg3_A
Probab=21.14 E-value=1.5e+02 Score=19.45 Aligned_cols=30 Identities=17% Similarity=0.225 Sum_probs=22.2
Q ss_pred CCcEEEEEEEcCCC-------------CCCCCCEEEEEEeCCC
Q 033710 33 NMRYFNVMILGPTQ-------------SPYEGGVFKLELFLPE 62 (113)
Q Consensus 33 ~~~~w~~~i~gp~~-------------t~y~g~~f~~~i~f~~ 62 (113)
+-.+|+++..|..+ +|-.-|.++|.+.-..
T Consensus 42 ~dleWkliYVgSa~s~~~DQ~Ld~v~VGPi~~G~~kFv~~adp 84 (175)
T 2hue_A 42 HDLEWKLTYVGSSRSLDHDQELDSILVGPVPVGVNKFVFSADP 84 (175)
T ss_dssp SCEEEEEEEESCTTCGGGEEEEEEEEECSCCSEEEEEEEEECC
T ss_pred CCcEEEEEEEcCCCCccCCeEeeEEEECCccceeEEEEEEcCC
Confidence 44899999998665 4666788888877643
No 97
>2d37_A Hypothetical NADH-dependent FMN oxidoreductase; flavin reductase; HET: FMN NAD; 1.70A {Sulfolobus tokodaii} PDB: 2d36_A* 2d38_A*
Probab=21.07 E-value=36 Score=21.94 Aligned_cols=30 Identities=13% Similarity=0.190 Sum_probs=24.0
Q ss_pred CCCCCeEEEec---cCccceeeCCCcEEcccCC
Q 033710 65 PMAAPKVRFLT---KIYHPNIDKLGRICLDILK 94 (113)
Q Consensus 65 P~~pP~v~f~t---~i~HPnv~~~G~icl~~l~ 94 (113)
-.+||.|.+.- .--|+++..+|.+|+++|.
T Consensus 59 S~~PPlv~v~i~~~~~T~~~i~~sg~F~Vnvl~ 91 (176)
T 2d37_A 59 SLNPPLVSFFADRMKGNDIPYKESKYFVVNFTD 91 (176)
T ss_dssp ETTTTEEEEEEEGGGTTTHHHHTCSEEEEEEEC
T ss_pred cCCCCEEEEEECCCchHHHHHHhCCeEEEEchh
Confidence 34789988863 3568899999999999986
Done!