BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033712
MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGNEVDSVKLTRKLQKKLGFASLLS
VQEEKDEKEKEKEKESKEIKQNPIEWAYCSQFPPPPYHQFVVDANPSSNCFIL

High Scoring Gene Products

Symbol, full name Information P value
AT4G05030 protein from Arabidopsis thaliana 1.7e-11
AT3G20180 protein from Arabidopsis thaliana 3.2e-10
AT3G07600 protein from Arabidopsis thaliana 1.2e-08
AT5G48290 protein from Arabidopsis thaliana 2.0e-08
AT5G52740 protein from Arabidopsis thaliana 1.1e-05
AT3G06130 protein from Arabidopsis thaliana 0.00073

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033712
        (113 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2138376 - symbol:AT4G05030 "AT4G05030" species...   157  1.7e-11   1
TAIR|locus:2087580 - symbol:AT3G20180 "AT3G20180" species...   145  3.2e-10   1
TAIR|locus:2091112 - symbol:AT3G07600 species:3702 "Arabi...   130  1.2e-08   1
TAIR|locus:2156253 - symbol:AT5G48290 species:3702 "Arabi...   128  2.0e-08   1
TAIR|locus:2149584 - symbol:AT5G52740 "AT5G52740" species...    81  1.1e-05   2
TAIR|locus:2082425 - symbol:AT3G06130 species:3702 "Arabi...    71  0.00073   2


>TAIR|locus:2138376 [details] [associations]
            symbol:AT4G05030 "AT4G05030" species:3702 "Arabidopsis
            thaliana" [GO:0046872 "metal ion binding" evidence=ISS]
            EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161502 EMBL:AF162444
            IPI:IPI00529329 PIR:C85063 RefSeq:NP_567284.1 UniGene:At.54153
            ProteinModelPortal:Q9S9T4 SMR:Q9S9T4 EnsemblPlants:AT4G05030.1
            GeneID:825845 KEGG:ath:AT4G05030 TAIR:At4g05030 eggNOG:NOG284398
            InParanoid:Q9S9T4 OMA:YYGYYCH PhylomeDB:Q9S9T4
            ProtClustDB:CLSN2917512 ArrayExpress:Q9S9T4 Genevestigator:Q9S9T4
            Uniprot:Q9S9T4
        Length = 110

 Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 32/61 (52%), Positives = 43/61 (70%)

Query:     1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGNEVDSVKLTRKLQKKLGFASLLS 60
             M C KCR +A+KI  K  GV  V I+GE KD++VVIG  VD+  L  +L+KK+GFA ++S
Sbjct:    44 MRCDKCRSEALKIGAKTTGVTFVGIEGEEKDKVVVIGEGVDAACLVVRLRKKVGFADIIS 103

Query:    61 V 61
             V
Sbjct:   104 V 104


>TAIR|locus:2087580 [details] [associations]
            symbol:AT3G20180 "AT3G20180" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND]
            EMBL:CP002686 IPI:IPI00542114 RefSeq:NP_188653.1 UniGene:At.63564
            ProteinModelPortal:F4JDJ0 DNASU:821562 EnsemblPlants:AT3G20180.1
            GeneID:821562 KEGG:ath:AT3G20180 OMA:GEFQDEL PhylomeDB:F4JDJ0
            Uniprot:F4JDJ0
        Length = 118

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 30/59 (50%), Positives = 43/59 (72%)

Query:     4 KKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGNEVDSVKLTRKLQKKLGFASLLSVQ 62
             +KCRKKAM++AV ADGV  V ++GE +DELVV+G+ VDS  L   L+KK    +L +++
Sbjct:    10 EKCRKKAMQVAVAADGVTSVAMEGEFQDELVVVGDGVDSASLIMALRKKACHVTLETLE 68


>TAIR|locus:2091112 [details] [associations]
            symbol:AT3G07600 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0030001 "metal ion
            transport" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA;ISS] InterPro:IPR006121 Pfam:PF00403 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0030001 EMBL:AC009176
            ProtClustDB:CLSN2684848 IPI:IPI00519941 RefSeq:NP_187417.1
            UniGene:At.18333 UniGene:At.48632 ProteinModelPortal:Q9SSF0
            SMR:Q9SSF0 EnsemblPlants:AT3G07600.1 GeneID:819951
            KEGG:ath:AT3G07600 eggNOG:NOG286763 OMA:QDPNCRI
            Genevestigator:Q9SSF0 Uniprot:Q9SSF0
        Length = 157

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 30/61 (49%), Positives = 40/61 (65%)

Query:     1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGNEVDSVKLTRKLQKKLGFASLLS 60
             MT    R KAMK AV+  GV  VEIKG+ ++++ V G EVD + L   L+KK+ FA L+S
Sbjct:    11 MTDDTTRAKAMKTAVQFKGVNAVEIKGDHRNQIEVTGVEVDMIALINTLRKKVAFAELVS 70

Query:    61 V 61
             V
Sbjct:    71 V 71


>TAIR|locus:2156253 [details] [associations]
            symbol:AT5G48290 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0030001 "metal ion
            transport" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA;ISS] InterPro:IPR006121 Pfam:PF00403 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0030001
            HOGENOM:HOG000237719 EMBL:BT020300 EMBL:BT020469 IPI:IPI00541268
            RefSeq:NP_568695.1 UniGene:At.28683 ProteinModelPortal:Q5PNZ7
            SMR:Q5PNZ7 EnsemblPlants:AT5G48290.1 GeneID:834882
            KEGG:ath:AT5G48290 TAIR:At5g48290 eggNOG:NOG241974
            InParanoid:Q5PNZ7 OMA:NDIGEPV PhylomeDB:Q5PNZ7
            ProtClustDB:CLSN2684848 Genevestigator:Q5PNZ7 Uniprot:Q5PNZ7
        Length = 181

 Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 30/61 (49%), Positives = 41/61 (67%)

Query:     1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGNEVDSVKLTRKLQKKLGFASLLS 60
             MT  K R KAM  AV+  GV  VEIKG+ ++++ V G EVD + L + L+KK+ FA L+S
Sbjct:    11 MTDDKTRAKAMTKAVQFKGVSAVEIKGDHRNQIEVTGVEVDMIPLIQILRKKVAFAELVS 70

Query:    61 V 61
             V
Sbjct:    71 V 71


>TAIR|locus:2149584 [details] [associations]
            symbol:AT5G52740 "AT5G52740" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0030001
            "metal ion transport" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA;ISS] [GO:0009627 "systemic acquired resistance"
            evidence=RCA] [GO:0034976 "response to endoplasmic reticulum
            stress" evidence=RCA] InterPro:IPR006121 Pfam:PF00403 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0030001 EMBL:AB025606
            HOGENOM:HOG000237719 IPI:IPI00529707 RefSeq:NP_200086.1
            UniGene:At.55513 ProteinModelPortal:Q9LTE3 SMR:Q9LTE3
            EnsemblPlants:AT5G52740.1 GeneID:835351 KEGG:ath:AT5G52740
            TAIR:At5g52740 eggNOG:NOG241888 InParanoid:Q9LTE3 OMA:CHTEFIS
            PhylomeDB:Q9LTE3 ProtClustDB:CLSN2916212 Genevestigator:Q9LTE3
            Uniprot:Q9LTE3
        Length = 118

 Score = 81 (33.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
 Identities = 23/59 (38%), Positives = 34/59 (57%)

Query:     3 CKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGNEVDSVKLTRKLQKKLGFASLLSV 61
             C+K ++KAM       GV  VE+K +GK  L V G E+D+  + +KL KK+     +SV
Sbjct:    12 CEKTKQKAMSTVCCLSGVNSVEVK-DGK--LTVTG-EIDAYMIVKKL-KKICHTEFISV 65

 Score = 32 (16.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
 Identities = 5/7 (71%), Positives = 5/7 (71%)

Query:    94 PPPYHQF 100
             PP YH F
Sbjct:    98 PPYYHNF 104


>TAIR|locus:2082425 [details] [associations]
            symbol:AT3G06130 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0030001 "metal ion
            transport" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0005618 "cell wall" evidence=IDA]
            InterPro:IPR006121 Pfam:PF00403 PROSITE:PS50846 GO:GO:0005618
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0030001
            SUPFAM:SSF55008 EMBL:AC018907 EMBL:AF326899 EMBL:AF349519
            EMBL:AY045685 EMBL:AY149962 IPI:IPI00516604 RefSeq:NP_566273.1
            UniGene:At.18931 ProteinModelPortal:Q9M8K5 SMR:Q9M8K5 PaxDb:Q9M8K5
            PRIDE:Q9M8K5 EnsemblPlants:AT3G06130.1 GeneID:819786
            KEGG:ath:AT3G06130 TAIR:At3g06130 eggNOG:NOG297926
            InParanoid:Q9M8K5 OMA:WGAPKGN ProtClustDB:CLSN2917112
            ArrayExpress:Q9M8K5 Genevestigator:Q9M8K5 Uniprot:Q9M8K5
        Length = 473

 Score = 71 (30.1 bits), Expect = 0.00073, Sum P(2) = 0.00073
 Identities = 19/50 (38%), Positives = 25/50 (50%)

Query:     3 CKKCRKKAMKIAVKADGVIKVEIKGE-GKDELVVIGNEVDSVKLTRKLQK 51
             C  C++K  KI  K +GV   +I  E GK   V +   VD   L +KL K
Sbjct:    20 CDGCKQKVKKILQKIEGVFTTKIDSEQGK---VTVSGSVDPSVLIKKLAK 66

 Score = 44 (20.5 bits), Expect = 0.00073, Sum P(2) = 0.00073
 Identities = 16/39 (41%), Positives = 19/39 (48%)

Query:    82 NPIEWAYCSQFP-PPPY------HQFVVDANPSSNCFIL 113
             NP  + Y   +P PPPY      H F  D N SS C I+
Sbjct:   437 NPHPYPYPYPYPYPPPYGNDQYSHAFS-DENTSS-CDIM 473


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.408    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      113        95   0.00091  102 3  11 22  0.37    30
                                                     29  0.43    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  566 (60 KB)
  Total size of DFA:  118 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.49u 0.12s 9.61t   Elapsed:  00:00:00
  Total cpu time:  9.49u 0.12s 9.61t   Elapsed:  00:00:00
  Start:  Fri May 10 01:10:19 2013   End:  Fri May 10 01:10:19 2013

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