Query 033712
Match_columns 113
No_of_seqs 147 out of 742
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 08:41:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033712.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033712hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.2 5.7E-11 1.9E-15 72.6 7.9 57 1-61 10-67 (68)
2 1cc8_A Protein (metallochapero 99.1 4.9E-10 1.7E-14 68.6 8.5 57 1-60 13-71 (73)
3 4a4j_A Pacszia, cation-transpo 99.0 2.2E-09 7.6E-14 64.6 7.4 55 1-58 11-68 (69)
4 2crl_A Copper chaperone for su 98.9 5.1E-09 1.7E-13 68.8 7.9 60 1-63 27-87 (98)
5 3dxs_X Copper-transporting ATP 98.9 1.1E-08 3.8E-13 62.3 7.8 58 1-60 11-71 (74)
6 2roe_A Heavy metal binding pro 98.8 1.1E-08 3.9E-13 60.6 6.2 55 1-58 9-64 (66)
7 2xmm_A SSR2857 protein, ATX1; 98.8 2E-08 6.8E-13 58.2 6.4 51 1-54 10-60 (64)
8 3fry_A Probable copper-exporti 98.7 2.4E-08 8.4E-13 61.3 5.5 55 1-60 14-69 (73)
9 1fvq_A Copper-transporting ATP 98.6 2.4E-07 8.2E-12 54.8 7.3 58 1-60 11-70 (72)
10 1cpz_A Protein (COPZ); copper 98.6 3.3E-07 1.1E-11 53.5 7.5 56 1-58 9-67 (68)
11 2l3m_A Copper-ION-binding prot 98.5 3.4E-07 1.2E-11 54.1 7.2 52 1-54 14-67 (71)
12 1osd_A MERP, hypothetical prot 98.5 4.5E-07 1.6E-11 53.6 7.7 56 1-58 12-70 (72)
13 2xmw_A PACS-N, cation-transpor 98.5 6.7E-07 2.3E-11 52.5 8.2 56 1-58 12-69 (71)
14 1qup_A Superoxide dismutase 1 98.5 3.4E-07 1.2E-11 68.9 8.3 61 1-64 14-75 (222)
15 2k2p_A Uncharacterized protein 98.5 1.8E-07 6.3E-12 59.7 5.9 51 1-54 31-81 (85)
16 3cjk_B Copper-transporting ATP 98.5 9.9E-07 3.4E-11 52.8 8.7 58 1-60 11-71 (75)
17 1aw0_A Menkes copper-transport 98.5 4.3E-07 1.5E-11 53.7 6.7 55 1-57 12-69 (72)
18 2kt2_A Mercuric reductase; nme 98.5 8.5E-07 2.9E-11 52.2 7.1 55 1-57 9-65 (69)
19 2qif_A Copper chaperone COPZ; 98.4 1.1E-06 3.9E-11 50.6 7.2 52 1-54 11-64 (69)
20 1jk9_B CCS, copper chaperone f 98.4 8.6E-07 2.9E-11 67.9 8.0 61 1-64 15-76 (249)
21 2g9o_A Copper-transporting ATP 98.4 7.4E-07 2.5E-11 56.8 6.5 59 1-60 12-75 (90)
22 1yg0_A COP associated protein; 98.4 1.5E-06 5.1E-11 50.3 7.1 52 1-54 10-62 (66)
23 1kvi_A Copper-transporting ATP 98.4 6.7E-07 2.3E-11 54.3 5.8 57 1-59 17-76 (79)
24 2kyz_A Heavy metal binding pro 98.4 4E-07 1.4E-11 54.0 4.6 49 1-54 10-58 (67)
25 1mwy_A ZNTA; open-faced beta-s 98.4 2.6E-06 9E-11 50.9 7.7 52 1-54 12-63 (73)
26 1q8l_A Copper-transporting ATP 98.3 1.2E-06 4E-11 54.5 6.0 57 1-59 18-77 (84)
27 1yjr_A Copper-transporting ATP 98.3 1.9E-06 6.7E-11 51.1 6.7 57 1-59 13-72 (75)
28 1opz_A Potential copper-transp 98.3 1.7E-06 6E-11 51.2 5.8 55 1-57 15-72 (76)
29 1p6t_A Potential copper-transp 98.3 1.6E-06 5.6E-11 58.7 5.9 58 1-60 83-143 (151)
30 2ew9_A Copper-transporting ATP 98.2 3.1E-06 1.1E-10 56.9 6.8 56 1-58 89-147 (149)
31 1y3j_A Copper-transporting ATP 98.2 2.4E-06 8.1E-11 51.6 5.5 57 1-59 12-71 (77)
32 2ldi_A Zinc-transporting ATPas 98.2 2.8E-06 9.4E-11 49.4 5.1 52 1-54 12-65 (71)
33 2kkh_A Putative heavy metal tr 98.2 8.6E-06 2.9E-10 51.8 7.4 59 1-61 25-86 (95)
34 2aj0_A Probable cadmium-transp 98.2 6.3E-06 2.2E-10 49.1 6.4 39 1-41 12-50 (71)
35 1jww_A Potential copper-transp 98.2 7.9E-06 2.7E-10 49.1 6.8 57 1-59 12-71 (80)
36 2rop_A Copper-transporting ATP 98.0 1.4E-05 4.8E-10 57.4 7.2 58 1-60 131-191 (202)
37 2ofg_X Zinc-transporting ATPas 98.0 1.8E-05 6.3E-10 52.2 6.9 52 1-54 17-70 (111)
38 2ew9_A Copper-transporting ATP 97.7 7.4E-05 2.5E-09 50.0 6.1 57 1-59 13-72 (149)
39 2rop_A Copper-transporting ATP 97.5 0.00014 4.9E-09 52.0 5.7 50 1-51 29-80 (202)
40 1p6t_A Potential copper-transp 97.3 0.00043 1.5E-08 46.5 5.8 52 1-54 15-68 (151)
41 3j09_A COPA, copper-exporting 97.0 0.0014 4.9E-08 56.1 6.9 54 1-56 11-67 (723)
42 3bpd_A Uncharacterized protein 92.3 0.3 1E-05 32.7 5.3 51 9-61 23-79 (100)
43 2raq_A Conserved protein MTH88 91.3 0.45 1.5E-05 31.7 5.3 46 9-54 23-74 (97)
44 2x3d_A SSO6206; unknown functi 91.2 0.49 1.7E-05 31.4 5.4 46 9-54 22-73 (96)
45 2jsx_A Protein NAPD; TAT, proo 83.9 4.7 0.00016 26.1 6.7 43 7-50 19-61 (95)
46 2k1h_A Uncharacterized protein 59.2 31 0.0011 22.2 5.9 39 10-51 41-80 (94)
47 2cpq_A FragIle X mental retard 58.0 23 0.0008 22.7 5.1 37 9-48 35-71 (91)
48 4ar0_A Type IV pilus biogenesi 49.9 55 0.0019 21.9 6.7 47 7-54 43-89 (128)
49 1pqx_A Conserved hypothetical 44.6 30 0.001 22.2 3.9 39 10-51 41-80 (91)
50 3gzb_A Putative snoal-like pol 43.6 27 0.00093 24.6 3.8 34 16-50 119-152 (154)
51 2qip_A Protein of unknown func 42.7 17 0.00057 24.9 2.7 29 32-61 112-141 (165)
52 3pro_C Alpha-lytic protease; P 41.6 45 0.0015 23.6 4.9 44 16-61 112-156 (166)
53 3g74_A Protein of unknown func 40.2 42 0.0014 21.7 4.2 26 40-65 60-85 (100)
54 3ami_A Zinc peptidase; alpha/b 36.7 25 0.00084 26.8 3.0 23 31-54 190-212 (445)
55 2e9h_A EIF-5, eukaryotic trans 36.0 42 0.0014 23.7 3.9 27 24-52 73-99 (157)
56 1uwd_A Hypothetical protein TM 35.6 30 0.001 21.9 2.9 21 7-27 62-82 (103)
57 3cq1_A Putative uncharacterize 35.2 30 0.001 21.9 2.9 21 7-27 61-81 (103)
58 2ogh_A Eukaryotic translation 35.1 56 0.0019 21.4 4.2 40 20-59 25-69 (108)
59 2g2k_A EIF-5, eukaryotic trans 34.7 43 0.0015 24.0 3.8 27 24-52 66-92 (170)
60 2kgs_A Uncharacterized protein 31.0 83 0.0028 20.9 4.7 29 10-43 69-97 (132)
61 3eoq_A Putative zinc protease; 30.8 37 0.0013 25.4 3.2 23 31-54 183-205 (406)
62 2ctf_A Vigilin; K homology typ 30.3 99 0.0034 19.7 4.8 39 9-49 48-86 (102)
63 2kl8_A OR15; structural genomi 29.4 1E+02 0.0035 19.0 5.4 42 6-51 18-59 (85)
64 3go9_A Insulinase family prote 29.2 40 0.0014 26.6 3.2 23 31-54 212-234 (492)
65 1hr6_B Beta-MPP, mitochondrial 28.5 43 0.0015 25.2 3.2 23 31-54 189-211 (443)
66 1d1r_A Hypothetical 11.4 KD pr 28.4 58 0.002 21.8 3.4 46 12-57 24-76 (116)
67 3amj_B Zinc peptidase inactive 28.3 46 0.0016 24.9 3.3 25 29-54 188-212 (424)
68 1vbk_A Hypothetical protein PH 28.1 1.9E+02 0.0063 21.8 6.7 43 6-54 26-70 (307)
69 3lno_A Putative uncharacterize 27.3 34 0.0012 21.9 2.1 21 7-27 64-85 (108)
70 1jrm_A MTH0637, conserved hypo 26.6 97 0.0033 20.1 4.2 46 6-53 52-99 (104)
71 2xzm_F EIF1; ribosome, transla 26.5 65 0.0022 20.9 3.4 41 19-59 17-62 (101)
72 1pp9_A Ubiquinol-cytochrome C 26.4 49 0.0017 25.1 3.2 23 31-54 195-217 (446)
73 2pb9_A Phosphomethylpyrimidine 25.2 1.6E+02 0.0056 21.2 5.7 41 10-52 143-186 (195)
74 2cuy_A Malonyl COA-[acyl carri 24.8 1.5E+02 0.005 22.1 5.5 52 8-61 138-189 (305)
75 3s1t_A Aspartokinase; ACT doma 24.2 1.8E+02 0.0062 20.1 5.8 50 9-60 73-131 (181)
76 3q9p_A Heat shock protein beta 23.4 50 0.0017 20.1 2.2 22 16-38 14-37 (85)
77 2yy3_A Elongation factor 1-bet 22.7 61 0.0021 20.8 2.6 21 7-27 67-87 (91)
78 1gh8_A Translation elongation 21.8 64 0.0022 20.5 2.5 21 7-27 64-84 (89)
79 3d3y_A Uncharacterized protein 20.7 75 0.0026 23.5 3.1 22 31-54 201-222 (425)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.22 E-value=5.7e-11 Score=72.55 Aligned_cols=57 Identities=26% Similarity=0.394 Sum_probs=53.2
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEeeccCHHHHHHHHHhhcC-ceeEEec
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGNEVDSVKLTRKLQKKLG-FASLLSV 61 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~~vDp~~l~~~LrKk~~-~aeivsv 61 (113)
|+|.+|..+|.++|.+++|| ++.+|. ..++++|.+. +++..|++.|++ .| .+++|+.
T Consensus 10 m~C~~C~~~i~~~l~~~~gV-~v~v~~-~~~~~~v~~~-~~~~~i~~~i~~-~Gy~~~~~~~ 67 (68)
T 3iwl_A 10 MTCGGCAEAVSRVLNKLGGV-KYDIDL-PNKKVCIESE-HSMDTLLATLKK-TGKTVSYLGL 67 (68)
T ss_dssp CCSHHHHHHHHHHHHHHCSE-EEEEET-TTTEEEEEES-SCHHHHHHHHHT-TCSCEEEEEC
T ss_pred cCcHHHHHHHHHHHHcCCCe-EEEEEc-CCCEEEEEec-CCHHHHHHHHHH-cCCceEecCC
Confidence 89999999999999999999 999999 7899999998 999999999996 77 8998865
No 2
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.11 E-value=4.9e-10 Score=68.64 Aligned_cols=57 Identities=25% Similarity=0.278 Sum_probs=52.5
Q ss_pred CCchhHHHHHHHHHhcCC-CeeEEEecCCCCCeEEEEeeccCHHHHHHHHHhhcC-ceeEEe
Q 033712 1 MTCKKCRKKAMKIAVKAD-GVIKVEIKGEGKDELVVIGNEVDSVKLTRKLQKKLG-FASLLS 60 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~-GV~sV~vd~~~k~kvtV~G~~vDp~~l~~~LrKk~~-~aeivs 60 (113)
|+|.+|..++.++|.+++ ||.++.+|. ..++++|.+. +++..|.+.|++ .| .+.+|.
T Consensus 13 m~C~~C~~~ie~~l~~~~~GV~~~~v~~-~~~~~~v~~~-~~~~~i~~~i~~-~Gy~~~~~~ 71 (73)
T 1cc8_A 13 MTCSGCSGAVNKVLTKLEPDVSKIDISL-EKQLVDVYTT-LPYDFILEKIKK-TGKEVRSGK 71 (73)
T ss_dssp CCSHHHHHHHHHHHHTTTTSEEEEEEET-TTTEEEEEES-SCHHHHHHHHHT-TSSCEEEEE
T ss_pred eECHHHHHHHHHHHHhCCCCceEEEEEC-CCCEEEEEEe-CCHHHHHHHHHH-hCCCceeee
Confidence 799999999999999999 999999999 7899999997 999999999996 67 777764
No 3
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=98.98 E-value=2.2e-09 Score=64.59 Aligned_cols=55 Identities=24% Similarity=0.419 Sum_probs=49.9
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEE--eeccCHHHHHHHHHhhcC-ceeE
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVI--GNEVDSVKLTRKLQKKLG-FASL 58 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~--G~~vDp~~l~~~LrKk~~-~aei 58 (113)
|+|.+|..++.++|.+++||.++.+|. ..++++|. +. +++..|.+.|++ .| .+++
T Consensus 11 m~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~-~~~~~i~~~i~~-~Gy~~~~ 68 (69)
T 4a4j_A 11 MDCTSCASSIERAIAKVPGVQSCQVNF-ALEQAVVSYHGE-TTPQILTDAVER-AGYHARV 68 (69)
T ss_dssp CCSHHHHHHHHHHHHTSTTEEEEEEET-TTTEEEEEECTT-CCHHHHHHHHHH-TTCEEEE
T ss_pred eecHHHHHHHHHHHhcCCCeEEEEEEe-cCCEEEEEECCC-CCHHHHHHHHHH-cCCceEe
Confidence 899999999999999999999999999 77899998 66 899999999996 66 6654
No 4
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.92 E-value=5.1e-09 Score=68.83 Aligned_cols=60 Identities=25% Similarity=0.318 Sum_probs=54.6
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEeeccCHHHHHHHHHhhcC-ceeEEecCC
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGNEVDSVKLTRKLQKKLG-FASLLSVQE 63 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~~vDp~~l~~~LrKk~~-~aeivsv~~ 63 (113)
|+|..|..+|.++|.+++||.++.+|. ..++++|.+. +++..|.+.|++ .| .+.++..+.
T Consensus 27 m~C~~C~~~Ie~aL~~l~GV~~v~vdl-~~~~~~V~~~-~~~~~i~~~i~~-~Gy~~~~~~~~~ 87 (98)
T 2crl_A 27 MTCQSCVDAVRKSLQGVAGVQDVEVHL-EDQMVLVHTT-LPSQEVQALLEG-TGRQAVLKGMGS 87 (98)
T ss_dssp CCSHHHHHHHHHTTTTCTTCCEEEEET-TTTEEEEEES-SCHHHHHHHHHT-TTSCEEEEESCC
T ss_pred eECHHHHHHHHHHHHcCCCceEEEEEC-CCCEEEEEEe-CCHHHHHHHHHH-hCCceEEccCCC
Confidence 899999999999999999999999999 7899999997 999999999986 67 788886543
No 5
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=98.87 E-value=1.1e-08 Score=62.35 Aligned_cols=58 Identities=21% Similarity=0.366 Sum_probs=51.8
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEee--ccCHHHHHHHHHhhcC-ceeEEe
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGN--EVDSVKLTRKLQKKLG-FASLLS 60 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~--~vDp~~l~~~LrKk~~-~aeivs 60 (113)
|+|.+|..+|.++|.+++||.++.++. ..++++|..+ .+++..|.+.|++ .| .+++++
T Consensus 11 m~C~~C~~~ie~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~Gy~~~~~~ 71 (74)
T 3dxs_X 11 MTCAACSNSVEAALMNVNGVFKASVAL-LQNRADVVFDPNLVKEEDIKEEIED-AGFEAEILA 71 (74)
T ss_dssp CCSHHHHHHHHHHHHTSTTEEEEEEEG-GGTEEEEEECTTTCCHHHHHHHHHH-HTCEEEEEE
T ss_pred cCCHHHHHHHHHHHhcCCCEEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHH-CCCceEEcc
Confidence 899999999999999999999999998 7789999864 3699999999996 67 788775
No 6
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=98.81 E-value=1.1e-08 Score=60.63 Aligned_cols=55 Identities=35% Similarity=0.471 Sum_probs=49.0
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEeeccCHHHHHHHHHhhcC-ceeE
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGNEVDSVKLTRKLQKKLG-FASL 58 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~~vDp~~l~~~LrKk~~-~aei 58 (113)
|+|..|..++.+.|.+++||.++.+|. ..++++|.+. +++..|.+.|++ .| .+..
T Consensus 9 m~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~-~~~~~i~~~i~~-~Gy~~~~ 64 (66)
T 2roe_A 9 MTCNHCVMAVTKALKKVPGVEKVEVSL-EKGEALVEGT-ADPKALVQAVEE-EGYKAEV 64 (66)
T ss_dssp CCSHHHHHHHHHHHHTSTTCCCEEECS-SSCBEEECSC-CCHHHHHHHHHT-TTCEEEE
T ss_pred eEcHHHHHHHHHHHHcCCCeEEEEEEe-CCCEEEECCC-CCHHHHHHHHHH-cCCCcEe
Confidence 899999999999999999999999999 7789999776 899999999986 67 5543
No 7
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=98.78 E-value=2e-08 Score=58.20 Aligned_cols=51 Identities=14% Similarity=0.353 Sum_probs=47.3
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEeeccCHHHHHHHHHhhcC
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGNEVDSVKLTRKLQKKLG 54 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~~vDp~~l~~~LrKk~~ 54 (113)
|+|..|..++.+.|.+++||.++.++. ..++++|.+. +++..|.+.|++ .|
T Consensus 10 m~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~-~~~~~i~~~i~~-~G 60 (64)
T 2xmm_A 10 IACEACAEAVTKAVQNEDAQATVQVDL-TSKKVTITSA-LGEEQLRTAIAS-AG 60 (64)
T ss_dssp CCSHHHHHHHHHHHHHHCTTCEEEECT-TTCEEEEECS-SCHHHHHHHHHH-TT
T ss_pred cCcHHHHHHHHHHHhcCCCcEEEEEEe-cCCEEEEEec-CCHHHHHHHHHH-cC
Confidence 799999999999999999999999998 7799999987 999999999985 55
No 8
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=98.71 E-value=2.4e-08 Score=61.27 Aligned_cols=55 Identities=18% Similarity=0.257 Sum_probs=49.7
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEeeccCHHHHHHHHHhhcC-ceeEEe
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGNEVDSVKLTRKLQKKLG-FASLLS 60 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~~vDp~~l~~~LrKk~~-~aeivs 60 (113)
|+|.+|..+|.++|.+ +||.++.++. ..++++|.++ ++..|...|++ .| .+++++
T Consensus 14 m~C~~C~~~ie~~l~~-~gv~~~~v~~-~~~~~~v~~~--~~~~i~~~i~~-~Gy~~~~~~ 69 (73)
T 3fry_A 14 LSCHHCVARVKKALEE-AGAKVEKVDL-NEAVVAGNKE--DVDKYIKAVEA-AGYQAKLRS 69 (73)
T ss_dssp SBCGGGHHHHHHHHHH-TTCEEEEECS-SEEEEEEEGG--GHHHHHHHHHH-TTCEEEECC
T ss_pred CCCHHHHHHHHHHhcc-CCcEEEEEEc-cCCEEEEEEC--CHHHHHHHHHH-cCCceEecC
Confidence 8999999999999999 9999999998 7789999987 89999999996 67 677654
No 9
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=98.59 E-value=2.4e-07 Score=54.80 Aligned_cols=58 Identities=24% Similarity=0.324 Sum_probs=49.8
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEee-ccCHHHHHHHHHhhcC-ceeEEe
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGN-EVDSVKLTRKLQKKLG-FASLLS 60 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~-~vDp~~l~~~LrKk~~-~aeivs 60 (113)
|+|..|..++.+.|.+++||.++.++. ..++++|..+ .+++..|.+.|++ .| .+.+++
T Consensus 11 m~C~~c~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~i~~~i~~-~G~~~~~~~ 70 (72)
T 1fvq_A 11 MTCSACTNTINTQLRALKGVTKCDISL-VTNECQVTYDNEVTADSIKEIIED-CGFDCEILR 70 (72)
T ss_dssp CCSHHHHHHHHHHHHTSSSEEEECCBT-TTTEEEEEECTTSCHHHHHHHHHH-HTCCEEEEE
T ss_pred eecHHHHHHHHHHHhcCCCeEEEEEEe-cCCEEEEEECCCCCHHHHHHHHHH-CCCceEEcc
Confidence 799999999999999999999999998 7788888753 3688999999986 67 677663
No 10
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=98.57 E-value=3.3e-07 Score=53.46 Aligned_cols=56 Identities=25% Similarity=0.464 Sum_probs=48.1
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEee--ccCHHHHHHHHHhhcC-ceeE
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGN--EVDSVKLTRKLQKKLG-FASL 58 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~--~vDp~~l~~~LrKk~~-~aei 58 (113)
|+|..|..++.+.|.+++||.++.++. ..++++|..+ .+++..|.+.|.+ .| .+++
T Consensus 9 m~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~G~~~~~ 67 (68)
T 1cpz_A 9 MSCNHCVARIEEAVGRISGVKKVKVQL-KKEKAVVKFDEANVQATEICQAINE-LGYQAEV 67 (68)
T ss_dssp CCSSSHHHHHHHHHHTSTTEEEEEEET-TTTEEEEEECTTTCCHHHHHHHHHT-TSSCEEE
T ss_pred eeCHHHHHHHHHHHHcCCCeEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHH-cCCCccc
Confidence 799999999999999999999999998 7789999865 2678889999985 66 5543
No 11
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=98.55 E-value=3.4e-07 Score=54.14 Aligned_cols=52 Identities=17% Similarity=0.304 Sum_probs=45.7
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEee--ccCHHHHHHHHHhhcC
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGN--EVDSVKLTRKLQKKLG 54 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~--~vDp~~l~~~LrKk~~ 54 (113)
|+|.+|..++.+.|.+++||.++.++. ..++++|..+ .+++..|.+.|.+ .|
T Consensus 14 m~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~G 67 (71)
T 2l3m_A 14 MSCGHCVNAIESSVKELNGVEQVKVQL-AEGTVEVTIDSSVVTLKDIVAVIED-QG 67 (71)
T ss_dssp CCSHHHHHHHHHHHHTSTTEEEEEEET-TTTEEEEEEETTTSCHHHHHHHHHH-TT
T ss_pred ccCHHHHHHHHHHHHcCCCeEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHH-cC
Confidence 799999999999999999999999998 7789998754 2678889999885 55
No 12
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=98.55 E-value=4.5e-07 Score=53.57 Aligned_cols=56 Identities=30% Similarity=0.400 Sum_probs=48.0
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEee--ccCHHHHHHHHHhhcC-ceeE
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGN--EVDSVKLTRKLQKKLG-FASL 58 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~--~vDp~~l~~~LrKk~~-~aei 58 (113)
|+|..|..++.+.|.+++||.++.++. ..++++|..+ .+++..|.+.|.+ .| .+.+
T Consensus 12 m~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~G~~~~~ 70 (72)
T 1osd_A 12 MTCSACPITVKKAISKVEGVSKVDVTF-ETRQAVVTFDDAKTSVQKLTKATAD-AGYPSSV 70 (72)
T ss_dssp CCSTTHHHHHHHHHHTSTTEEEEEEET-TTTEEEEEEETTTCCHHHHHHHHHH-TTCCCEE
T ss_pred eEcHHHHHHHHHHHhcCCCeEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHh-cCCCeEe
Confidence 799999999999999999999999998 7789999865 2578889999985 66 5543
No 13
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=98.53 E-value=6.7e-07 Score=52.54 Aligned_cols=56 Identities=23% Similarity=0.364 Sum_probs=46.3
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEee-ccCHHHHHHHHHhhcC-ceeE
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGN-EVDSVKLTRKLQKKLG-FASL 58 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~-~vDp~~l~~~LrKk~~-~aei 58 (113)
|+|.+|..++.+.|.+++||.++.++. ..++++|..+ .+++..|.+.|.+ .| .+.+
T Consensus 12 m~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~i~~~i~~-~G~~~~~ 69 (71)
T 2xmw_A 12 MRCAACASSIERAIAKVPGVQSCQVNF-ALEQAVVSYHGETTPQILTDAVER-AGYHARV 69 (71)
T ss_dssp CCSHHHHHHHHHHHHTSTTEEEEEEET-TTTEEEEEEC---CHHHHHHHHHH-HTCEEEE
T ss_pred cccHHHHHHHHHHHhcCCCeEEEEEEc-cCCEEEEEECCCCCHHHHHHHHHH-cCCCcee
Confidence 799999999999999999999999998 7788888754 2678888998885 66 4443
No 14
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.52 E-value=3.4e-07 Score=68.92 Aligned_cols=61 Identities=15% Similarity=0.247 Sum_probs=54.7
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEeeccCHHHHHHHHHhhcC-ceeEEecCCC
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGNEVDSVKLTRKLQKKLG-FASLLSVQEE 64 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~~vDp~~l~~~LrKk~~-~aeivsv~~~ 64 (113)
|+|..|.++|.++|.+++||.++.++. ..++++|.+. +++..|.+.|++ .| .+.++..+..
T Consensus 14 MtC~~Ca~~IekaL~~l~GV~~v~Vnl-~~~~v~V~~~-~~~~~I~~aI~~-~Gy~a~~~~~~~~ 75 (222)
T 1qup_A 14 MHCENCVNDIKACLKNVPGINSLNFDI-EQQIMSVESS-VAPSTIINTLRN-CGKDAIIRGAGKP 75 (222)
T ss_dssp CCSTTHHHHHHHHHTTCTTEEEEEEET-TTTEEEEEES-SCHHHHHHHHHH-TTCCCEEECCSCT
T ss_pred cccHHHHHHHHHHHhcCCCeeEEEEEc-CCCEEEEecc-CCHHHHHHHHHH-cCCccccccCCCc
Confidence 899999999999999999999999999 7799999998 999999999986 67 7887765443
No 15
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=98.52 E-value=1.8e-07 Score=59.68 Aligned_cols=51 Identities=22% Similarity=0.260 Sum_probs=47.5
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEeeccCHHHHHHHHHhhcC
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGNEVDSVKLTRKLQKKLG 54 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~~vDp~~l~~~LrKk~~ 54 (113)
|+|..|..+|.+.|.+++||.++.+|. ..++++|.+. +++..|.+.|++ .|
T Consensus 31 m~C~~C~~~Ie~aL~~~~GV~~v~v~l-~~~~~~V~~~-~~~~~i~~~i~~-~G 81 (85)
T 2k2p_A 31 MTCGHCAGVIKGAIEKTVPGAAVHADP-ASRTVVVGGV-SDAAHIAEIITA-AG 81 (85)
T ss_dssp CCHHHHHHHHHHHHHHHSTTCEEEEET-TTTEEEEESC-CCHHHHHHHHHH-TT
T ss_pred CCCHHHHHHHHHHHhcCCCeeEEEEEC-CCCEEEEEec-CCHHHHHHHHHH-cC
Confidence 799999999999999999999999999 7799999998 999999999985 55
No 16
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=98.51 E-value=9.9e-07 Score=52.85 Aligned_cols=58 Identities=19% Similarity=0.299 Sum_probs=49.8
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEee--ccCHHHHHHHHHhhcC-ceeEEe
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGN--EVDSVKLTRKLQKKLG-FASLLS 60 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~--~vDp~~l~~~LrKk~~-~aeivs 60 (113)
|+|..|..++.+.|.+++||.++.++. ..++++|..+ .+++..|.+.|.+ .| .+.++.
T Consensus 11 m~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~Gy~~~~~~ 71 (75)
T 3cjk_B 11 MTCNSCVWTIEQQIGKVNGVHHIKVSL-EEKNATIIYDPKLQTPKTLQEAIDD-MGFDAVIHN 71 (75)
T ss_dssp CCSHHHHHHHHHHHHTSTTEEEEEEET-TTTEEEEEECTTTCCHHHHHHHHHH-TTCCEEEEE
T ss_pred ccCHHHHHHHHHHHhcCCCeEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHH-cCCceEeec
Confidence 899999999999999999999999998 7789999865 2578889999986 67 666654
No 17
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=98.50 E-value=4.3e-07 Score=53.67 Aligned_cols=55 Identities=20% Similarity=0.303 Sum_probs=47.5
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEee--ccCHHHHHHHHHhhcC-cee
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGN--EVDSVKLTRKLQKKLG-FAS 57 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~--~vDp~~l~~~LrKk~~-~ae 57 (113)
|+|..|..++.+.|.+++||.++.++. ..++++|..+ .+++..|.+.|.+ .| .+.
T Consensus 12 m~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~G~~~~ 69 (72)
T 1aw0_A 12 MTCNSCVQSIEGVISKKPGVKSIRVSL-ANSNGTVEYDPLLTSPETLRGAIED-MGFDAT 69 (72)
T ss_dssp CCHHHHHHHHHHHHHTSTTCCCEEEET-TTTEEEEEECTTTCCHHHHHHHHHH-HTCEEE
T ss_pred eecHHHHHHHHHHHhcCCCeEEEEEEc-cCCEEEEEECCCcCCHHHHHHHHHH-CCCCcE
Confidence 799999999999999999999999998 7789999876 2578889999985 66 444
No 18
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=98.45 E-value=8.5e-07 Score=52.21 Aligned_cols=55 Identities=24% Similarity=0.247 Sum_probs=46.9
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEee-ccCHHHHHHHHHhhcC-cee
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGN-EVDSVKLTRKLQKKLG-FAS 57 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~-~vDp~~l~~~LrKk~~-~ae 57 (113)
|+|..|..++.+.|.+++||.++.++. ..++++|..+ ..++..|.+.|.+ .| .+.
T Consensus 9 m~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~i~~~i~~-~Gy~~~ 65 (69)
T 2kt2_A 9 MTCDSCAAHVKEALEKVPGVQSALVSY-PKGTAQLAIVPGTSPDALTAAVAG-LGYKAT 65 (69)
T ss_dssp SCSTHHHHHHHHHHHHSTTEEEEEEET-TTTEEEEEECTTSCHHHHHHHHHT-TTSEEE
T ss_pred cccHHHHHHHHHHHHcCCCeeEEEEEc-cCCEEEEEECCCCCHHHHHHHHHH-CCCceE
Confidence 799999999999999999999999998 7788888754 2578889999985 66 444
No 19
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=98.43 E-value=1.1e-06 Score=50.56 Aligned_cols=52 Identities=21% Similarity=0.347 Sum_probs=45.3
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEee--ccCHHHHHHHHHhhcC
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGN--EVDSVKLTRKLQKKLG 54 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~--~vDp~~l~~~LrKk~~ 54 (113)
|+|.+|..++.+.|.+++||.++.++. ..++++|..+ .+++..|...|.+ .|
T Consensus 11 m~C~~c~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~G 64 (69)
T 2qif_A 11 MSCQHCVKAVETSVGELDGVSAVHVNL-EAGKVDVSFDADKVSVKDIADAIED-QG 64 (69)
T ss_dssp CCSHHHHHHHHHHHHTSTTEEEEEEET-TTTEEEEEECTTTCCHHHHHHHHHH-TT
T ss_pred cccHHHHHHHHHHHhcCCCeeEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHH-cC
Confidence 789999999999999999999999998 7789998754 2678888888885 55
No 20
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.41 E-value=8.6e-07 Score=67.92 Aligned_cols=61 Identities=15% Similarity=0.247 Sum_probs=54.9
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEeeccCHHHHHHHHHhhcC-ceeEEecCCC
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGNEVDSVKLTRKLQKKLG-FASLLSVQEE 64 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~~vDp~~l~~~LrKk~~-~aeivsv~~~ 64 (113)
|+|..|..+|.++|.+++||.++.++. ..++++|.+. +++..|.+.|++ .| .+.++..+..
T Consensus 15 MtC~~Ca~~IekaL~~l~GV~~v~Vnl-~~~~v~V~~~-~~~~~I~~aIe~-~Gy~a~~~~~~~~ 76 (249)
T 1jk9_B 15 MHCENCVNDIKACLKNVPGINSLNFDI-EQQIMSVESS-VAPSTIINTLRN-CGKDAIIRGAGKP 76 (249)
T ss_dssp CCSSSHHHHHHHHHTTCTTEEEEEEET-TTTEEEEEES-SCHHHHHHHHHT-TTCCCEEEEESST
T ss_pred eccHHHHHHHHHHHhccCCeeEEEEEc-CCCeEEEecC-CCHHHHHHHHHH-hCCCcccccCCcc
Confidence 899999999999999999999999999 7799999988 999999999996 67 7887766544
No 21
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=98.41 E-value=7.4e-07 Score=56.77 Aligned_cols=59 Identities=19% Similarity=0.191 Sum_probs=49.2
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEee--ccCHHHHHHHHHhh--cC-ceeEEe
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGN--EVDSVKLTRKLQKK--LG-FASLLS 60 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~--~vDp~~l~~~LrKk--~~-~aeivs 60 (113)
|+|..|..+|.++|.+++||.++.++. ..++++|..+ .+++..|.+.|.+- .| .+.+++
T Consensus 12 m~C~~C~~~Ie~~L~~~~GV~~v~v~l-~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~ 75 (90)
T 2g9o_A 12 MHCKSCVSNIESTLSALQYVSSIVVSL-ENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITS 75 (90)
T ss_dssp CCHHHHHHHHHHHHTTCTTEEEEEEET-TTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCC
T ss_pred cCCHHHHHHHHHHHHcCCCeeEEEEEc-cCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeC
Confidence 899999999999999999999999999 7789999854 26788999999863 14 565553
No 22
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=98.39 E-value=1.5e-06 Score=50.30 Aligned_cols=52 Identities=23% Similarity=0.354 Sum_probs=45.1
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEee-ccCHHHHHHHHHhhcC
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGN-EVDSVKLTRKLQKKLG 54 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~-~vDp~~l~~~LrKk~~ 54 (113)
|+|..|..++.+.|.+++||.++.++. ..++++|..+ ..++..|.+.|++ .|
T Consensus 10 m~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~i~~~i~~-~G 62 (66)
T 1yg0_A 10 ITCNHCVDKIEKFVGEIEGVSFIDVSV-EKKSVVVEFDAPATQDLIKEALLD-AG 62 (66)
T ss_dssp CSCSHHHHHHHHHHTTSSSEEEEEEET-TTTEEEEEECTTCCHHHHHHHHHH-HT
T ss_pred cccHHHHHHHHHHHhcCCCceEEEEEc-CCCEEEEEECCCCCHHHHHHHHHH-cC
Confidence 799999999999999999999999998 7789999865 2477888888875 55
No 23
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=98.39 E-value=6.7e-07 Score=54.25 Aligned_cols=57 Identities=19% Similarity=0.299 Sum_probs=48.6
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEee--ccCHHHHHHHHHhhcC-ceeEE
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGN--EVDSVKLTRKLQKKLG-FASLL 59 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~--~vDp~~l~~~LrKk~~-~aeiv 59 (113)
|+|..|..++.+.|.+++||.++.++. ..++++|..+ .+++..|.+.|.+ .| .+.+.
T Consensus 17 m~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~Gy~~~~~ 76 (79)
T 1kvi_A 17 MTCNSCVWTIEQQIGKVNGVHHIKVSL-EEKNATIIYDPKLQTPKTLQEAIDD-MGFDAVIH 76 (79)
T ss_dssp CCSTTTHHHHHHHHHHSSSCCCEEEEG-GGTEEEEEECTTTCCHHHHHHHHHH-HCCCEEEC
T ss_pred ccCHHHHHHHHHHHhcCCCeEEEEEEc-cCCEEEEEECCCCCCHHHHHHHHHH-CCCceEec
Confidence 799999999999999999999999998 7789999865 2578889999986 67 56554
No 24
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=98.39 E-value=4e-07 Score=54.03 Aligned_cols=49 Identities=20% Similarity=0.380 Sum_probs=43.8
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEeeccCHHHHHHHHHhhcC
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGNEVDSVKLTRKLQKKLG 54 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~~vDp~~l~~~LrKk~~ 54 (113)
|+|.+|..++.+.|.++ ||.++.+|. ..++++|.++ .+ ..|...|++ .|
T Consensus 10 m~C~~C~~~i~~~l~~~-gv~~~~v~~-~~~~~~v~~~-~~-~~i~~~i~~-~G 58 (67)
T 2kyz_A 10 ISCNHCKMRISKALEEL-GVKNYEVSV-EEKKVVVETE-NL-DSVLKKLEE-ID 58 (67)
T ss_dssp GGSHHHHHHHHHHHHHH-TCSEEEEET-TTTEEEEECS-CH-HHHHHHHHT-TT
T ss_pred cCcHHHHHHHHHHHHHc-CCeEEEEEC-CCCEEEEEEC-CH-HHHHHHHHH-cC
Confidence 78999999999999999 999999998 7799999887 55 788888885 56
No 25
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=98.35 E-value=2.6e-06 Score=50.93 Aligned_cols=52 Identities=27% Similarity=0.410 Sum_probs=44.2
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEeeccCHHHHHHHHHhhcC
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGNEVDSVKLTRKLQKKLG 54 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~~vDp~~l~~~LrKk~~ 54 (113)
|+|..|..++.+.|.+++||.++.++. ..++++|..+......|.+.|.. .|
T Consensus 12 m~C~~C~~~ie~~l~~~~gV~~~~v~~-~~~~~~v~~~~~~~~~i~~~i~~-~G 63 (73)
T 1mwy_A 12 MDCAACARKVENAVRQLAGVNQVQVLF-ATEKLVVDADNDIRAQVESALQK-AG 63 (73)
T ss_dssp CCSTTHHHHHHHHHHTSSSEEEEEEET-TTTEEEEEESSCCHHHHHHHHHH-HT
T ss_pred cCCHHHHHHHHHHHhcCCCeeEEEEEe-cCCEEEEEECCCCHHHHHHHHHH-cC
Confidence 799999999999999999999999998 77899998773235667777875 66
No 26
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=98.33 E-value=1.2e-06 Score=54.47 Aligned_cols=57 Identities=18% Similarity=0.349 Sum_probs=49.0
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEee--ccCHHHHHHHHHhhcC-ceeEE
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGN--EVDSVKLTRKLQKKLG-FASLL 59 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~--~vDp~~l~~~LrKk~~-~aeiv 59 (113)
|+|..|..+|.+.|.+++||.++.++. ..++++|..+ .+++..|.+.|.+ .| .+.++
T Consensus 18 m~C~~C~~~ie~~l~~~~GV~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~Gy~~~~~ 77 (84)
T 1q8l_A 18 MTCHSCTSTIEGKIGKLQGVQRIKVSL-DNQEATIVYQPHLISVEEMKKQIEA-MGFPAFVK 77 (84)
T ss_dssp TTTCSSCHHHHHHHHTCTTEEEEEECS-TTTEEEEEECTTTCCHHHHHHHHHH-TTCCEECS
T ss_pred cccHHHHHHHHHHHHcCCCeEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHH-cCCceEec
Confidence 899999999999999999999999998 7789999875 2578889999985 67 55544
No 27
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=98.33 E-value=1.9e-06 Score=51.13 Aligned_cols=57 Identities=19% Similarity=0.344 Sum_probs=46.9
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEee--ccCHHHHHHHHHhhcC-ceeEE
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGN--EVDSVKLTRKLQKKLG-FASLL 59 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~--~vDp~~l~~~LrKk~~-~aeiv 59 (113)
|+|..|..++.+.|.+++||.++.++. ..++++|..+ .+++..|.+.|.+ .| .+.+.
T Consensus 13 m~C~~c~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~G~~~~~~ 72 (75)
T 1yjr_A 13 MTCASCVHKIESSLTKHRGILYCSVAL-ATNKAHIKYDPEIIGPRDIIHTIES-LGFEPSLV 72 (75)
T ss_dssp CCTTTHHHHHHHHHTTSTTEEEEEEET-TTTEEEEEECTTTTHHHHHHHHHHH-HHCEEEES
T ss_pred cccHHHHHHHHHHHHcCCCEEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHH-cCCCceee
Confidence 799999999999999999999999998 7789999865 2456778888875 55 45443
No 28
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=98.29 E-value=1.7e-06 Score=51.20 Aligned_cols=55 Identities=25% Similarity=0.440 Sum_probs=46.5
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEee--ccCHHHHHHHHHhhcC-cee
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGN--EVDSVKLTRKLQKKLG-FAS 57 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~--~vDp~~l~~~LrKk~~-~ae 57 (113)
|+|.+|..++.+.|.+++||.++.++. ..++++|.-+ .+++..|...|.+ .| .+.
T Consensus 15 m~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~G~~~~ 72 (76)
T 1opz_A 15 MTCAACAARIEKGLKRMPGVTDANVNL-ATETVNVIYDPAETGTAAIQEKIEK-LGYHVV 72 (76)
T ss_dssp CCSTTHHHHHHHHHHTSTTEEEEEEEG-GGTEEEEEECTTTCCHHHHHHHHHH-HTCEEE
T ss_pred cccHHHHHHHHHHHhcCCCeEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHH-CCCcee
Confidence 789999999999999999999999998 7789988743 2678889998885 66 443
No 29
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.27 E-value=1.6e-06 Score=58.71 Aligned_cols=58 Identities=28% Similarity=0.371 Sum_probs=50.0
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEee--ccCHHHHHHHHHhhcC-ceeEEe
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGN--EVDSVKLTRKLQKKLG-FASLLS 60 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~--~vDp~~l~~~LrKk~~-~aeivs 60 (113)
|+|..|..+|.+.|.+++||.++.++. ..++++|.-+ .+++..|++.|++ .| .+.+++
T Consensus 83 m~C~~C~~~ie~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~Gy~~~~~~ 143 (151)
T 1p6t_A 83 MTCAACANRIEKRLNKIEGVANAPVNF-ALETVTVEYNPKEASVSDLKEAVDK-LGYKLKLKG 143 (151)
T ss_dssp CCSSSHHHHHHHHHTTSSSEEECCEET-TTTEEEEEECTTTCCHHHHHHHHHH-HTCCEEESC
T ss_pred CCCHHHHHHHHHHHhcCCCceEEEEEc-cCCEEEEEECCCCCCHHHHHHHHHH-cCCCeEEcC
Confidence 899999999999999999999999998 7789999843 3789999999986 67 676653
No 30
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.24 E-value=3.1e-06 Score=56.93 Aligned_cols=56 Identities=18% Similarity=0.364 Sum_probs=48.4
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEee--ccCHHHHHHHHHhhcC-ceeE
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGN--EVDSVKLTRKLQKKLG-FASL 58 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~--~vDp~~l~~~LrKk~~-~aei 58 (113)
|+|..|..+|.+.|.+++||.++.++. ..++++|..+ .+++..|.+.|.+ .| .+.+
T Consensus 89 m~C~~C~~~ie~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~Gy~~~~ 147 (149)
T 2ew9_A 89 MTCASCVHNIESKLTRTNGITYASVAL-ATSKALVKFDPEIIGPRDIIKIIEE-IGFHASL 147 (149)
T ss_dssp CCSHHHHHHHHHHHHHSSSCCEEEEET-TTTEEEEECCTTTSCHHHHHHHHHH-HTCEEEC
T ss_pred ccCHHHHHHHHHHHhcCCCeEEEEEEc-CCCEEEEEECCCCCCHHHHHHHHHh-CCCceEe
Confidence 899999999999999999999999999 7789999865 2578899999985 67 5544
No 31
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=98.23 E-value=2.4e-06 Score=51.63 Aligned_cols=57 Identities=18% Similarity=0.289 Sum_probs=48.6
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEee--ccCHHHHHHHHHhhcC-ceeEE
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGN--EVDSVKLTRKLQKKLG-FASLL 59 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~--~vDp~~l~~~LrKk~~-~aeiv 59 (113)
|+|..|..++.+.|.+++||.++.++. ..++++|..+ .+++..|.+.|.+ .| .+.++
T Consensus 12 m~C~~C~~~ie~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~Gy~~~~~ 71 (77)
T 1y3j_A 12 MTCASCVANIERNLRREEGIYSILVAL-MAGKAEVRYNPAVIQPPMIAEFIRE-LGFGATVI 71 (77)
T ss_dssp GGGCSHHHHHHHHHTTSSSEEECCCBT-TTTBEEEEECTTTSCHHHHHHHHHH-HTSCEEEE
T ss_pred eeCHHHHHHHHHHHhcCCCeEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHH-cCCceEEC
Confidence 789999999999999999999999998 7789999764 2578889999985 67 56554
No 32
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=98.19 E-value=2.8e-06 Score=49.41 Aligned_cols=52 Identities=19% Similarity=0.439 Sum_probs=45.1
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEee--ccCHHHHHHHHHhhcC
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGN--EVDSVKLTRKLQKKLG 54 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~--~vDp~~l~~~LrKk~~ 54 (113)
|+|.+|..++.+.|.+++||.++.++. ..++++|..+ .++...|.+.|.. .|
T Consensus 12 m~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~G 65 (71)
T 2ldi_A 12 MRCAACASSIERALERLKGVAEASVTV-ATGRLTVTYDPKQVSEITIQERIAA-LG 65 (71)
T ss_dssp CTTSGGGHHHHTGGGGCSSEEEEEEET-TTTEEEEEECTTTCCTHHHHHHHHT-TT
T ss_pred ccCHHHHHHHHHHHhcCCCeeEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHH-cC
Confidence 799999999999999999999999998 7789998754 2577888888875 56
No 33
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=98.17 E-value=8.6e-06 Score=51.77 Aligned_cols=59 Identities=14% Similarity=0.205 Sum_probs=49.3
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEeec--cCHHHHHHHHHhhcC-ceeEEec
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGNE--VDSVKLTRKLQKKLG-FASLLSV 61 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~~--vDp~~l~~~LrKk~~-~aeivsv 61 (113)
|+|..|..++.+.|.+++||.++.++. ..++++|..+. +++..|...|.. .| .+.+...
T Consensus 25 m~C~~C~~~ie~~l~~~~GV~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~Gy~~~~~~~ 86 (95)
T 2kkh_A 25 ICCTSEVPIIENILKSLDGVKEYSVIV-PSRTVIVVHDSLLISPFQIAKALNE-ARLEANVRVN 86 (95)
T ss_dssp CCTTTTHHHHHHHHHHSSSEEEEEEET-TTTEEEEEECTTTCCHHHHHHHHHH-HTCCEEESCC
T ss_pred cCCHHHHHHHHHHHhcCCCeeEEEEEc-cCCEEEEEECCCCCCHHHHHHHHHH-cCCceEEecC
Confidence 799999999999999999999999998 77899998652 478889998985 67 5655433
No 34
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.17 E-value=6.3e-06 Score=49.07 Aligned_cols=39 Identities=21% Similarity=0.478 Sum_probs=36.3
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEeeccC
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGNEVD 41 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~~vD 41 (113)
|+|..|..++.+.|.+++||.++.++. ..++++|.++ .+
T Consensus 12 m~C~~C~~~ie~~l~~~~gv~~~~v~~-~~~~~~v~~~-~~ 50 (71)
T 2aj0_A 12 LSCTNCAAKFERNVKEIEGVTEAIVNF-GASKITVTGE-AS 50 (71)
T ss_dssp CCCHHHHHHHHHHHHHSTTEEEEEECC-SSEEEEEEES-CC
T ss_pred cccHHHHHHHHHHHHcCCCeEEEEEEC-CCCEEEEEec-Cc
Confidence 789999999999999999999999998 7789999988 55
No 35
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=98.16 E-value=7.9e-06 Score=49.11 Aligned_cols=57 Identities=28% Similarity=0.376 Sum_probs=47.8
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEee--ccCHHHHHHHHHhhcC-ceeEE
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGN--EVDSVKLTRKLQKKLG-FASLL 59 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~--~vDp~~l~~~LrKk~~-~aeiv 59 (113)
|+|..|..++.+.|.+++||.++.++. ..++++|..+ .+++..|...|.+ .| .+.++
T Consensus 12 m~C~~C~~~i~~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~G~~~~~~ 71 (80)
T 1jww_A 12 MTCAACANRIEKRLNKIEGVANAPVNF-ALETVTVEYNPKEASVSDLKEAVDK-LGYKLKLK 71 (80)
T ss_dssp CCCHHHHHHHHHHHHTSTTEEECCCCS-SSSEEEEEECTTTCCHHHHHHHHHH-HTSEEEEC
T ss_pred ccCHHHHHHHHHHHhcCCCeEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHH-cCCeEEec
Confidence 799999999999999999999999998 7789988753 2678889998885 67 55544
No 36
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.03 E-value=1.4e-05 Score=57.37 Aligned_cols=58 Identities=22% Similarity=0.411 Sum_probs=49.5
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEee--ccCHHHHHHHHHhhcC-ceeEEe
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGN--EVDSVKLTRKLQKKLG-FASLLS 60 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~--~vDp~~l~~~LrKk~~-~aeivs 60 (113)
|+|..|..+|.++|.+++||.++.++. ..++++|..+ .+++..|...|.+ .| .+.++.
T Consensus 131 m~C~~C~~~ie~~l~~~~GV~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~Gy~~~~~~ 191 (202)
T 2rop_A 131 MTCASCVHSIEGMISQLEGVQQISVSL-AEGTATVLYNPAVISPEELRAAIED-MGFEASVVS 191 (202)
T ss_dssp CCSTHHHHHHHHHGGGSSSEEEEEEET-TTTEEEEEECTTTCCHHHHHHHHHH-HTSCEEEC-
T ss_pred ccCHHHHHHHHHHHHcCCCeEEEEEEc-cCCEEEEEECCCCCCHHHHHHHHHH-cCCceEEcC
Confidence 899999999999999999999999999 7789999754 2688999999986 67 666653
No 37
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=98.01 E-value=1.8e-05 Score=52.24 Aligned_cols=52 Identities=21% Similarity=0.443 Sum_probs=45.9
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEee--ccCHHHHHHHHHhhcC
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGN--EVDSVKLTRKLQKKLG 54 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~--~vDp~~l~~~LrKk~~ 54 (113)
|+|..|..+|.+.|.+++||.++.++. ..++++|..+ .+++..|.+.|.. .|
T Consensus 17 m~C~~Ca~~Ie~~L~~~~GV~~v~v~~-~~~~~~V~~~~~~~~~~~i~~~i~~-~G 70 (111)
T 2ofg_X 17 MDCTSCKLKIEGSLERLKGVAEASVTV-ATGRLTVTYDPKQVSEITIQERIAA-LG 70 (111)
T ss_dssp CCGGGTHHHHHHHHTTSSSEEEEEEET-TTTEEEEEECTTTCSHHHHHHHHHT-TT
T ss_pred cCCHHHHHHHHHHHHcCCCeeEEEEEC-CCCEEEEEECCCCCCHHHHHHHHHH-cC
Confidence 799999999999999999999999998 7789999865 2577889999985 66
No 38
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=97.72 E-value=7.4e-05 Score=50.01 Aligned_cols=57 Identities=21% Similarity=0.346 Sum_probs=47.6
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEee--ccCHHHHHHHHHhhcC-ceeEE
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGN--EVDSVKLTRKLQKKLG-FASLL 59 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~--~vDp~~l~~~LrKk~~-~aeiv 59 (113)
|+|.+|..++.+.|.+++||.++.++. ..++++|..+ .+++..|...|.. .| .+.++
T Consensus 13 m~C~~C~~~ie~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~G~~~~~~ 72 (149)
T 2ew9_A 13 MTCASCVSNIERNLQKEAGVLSVLVAL-MAGKAEIKYDPEVIQPLEIAQFIQD-LGFEAAVM 72 (149)
T ss_dssp CCSSSHHHHHHHHHHTTSSCCCEEEET-TTTEEEEEECTTTCCHHHHHHHHHH-HTCEEEEC
T ss_pred eecHHHHHHHHHHHhcCCCcEEEEEEe-cCCEEEEEEcCCCCCHHHHHHHHhc-CCCceEee
Confidence 899999999999999999999999998 6788888753 3677889999885 66 55543
No 39
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=97.53 E-value=0.00014 Score=52.03 Aligned_cols=50 Identities=20% Similarity=0.249 Sum_probs=44.4
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEee--ccCHHHHHHHHHh
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGN--EVDSVKLTRKLQK 51 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~--~vDp~~l~~~LrK 51 (113)
|+|.+|..+|.+.|.+++||.++.++. ..++++|..+ .+++..|...|..
T Consensus 29 m~C~~C~~~ie~~l~~~~GV~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~ 80 (202)
T 2rop_A 29 MHCKSCVLNIEENIGQLLGVQSIQVSL-ENKTAQVKYDPSCTSPVALQRAIEA 80 (202)
T ss_dssp GGGSTHHHHHHHHTTSBTTEEEEEEET-TTTEEEEEECTTTCCHHHHHHHHTT
T ss_pred eEcHHHHHHHHHHHhcCCCeEEEEEEe-cCCEEEEEECCCCCCHHHHHHHHHH
Confidence 799999999999999999999999998 7789999865 2577889998885
No 40
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=97.34 E-value=0.00043 Score=46.52 Aligned_cols=52 Identities=27% Similarity=0.471 Sum_probs=44.1
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEee--ccCHHHHHHHHHhhcC
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGN--EVDSVKLTRKLQKKLG 54 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~--~vDp~~l~~~LrKk~~ 54 (113)
|+|.+|..++.+.|.+++||.++.++. ..++++|..+ .+++..+...++. .|
T Consensus 15 m~C~~C~~~ie~~l~~~~gv~~~~v~~-~~~~~~v~~~~~~~~~~~i~~~i~~-~G 68 (151)
T 1p6t_A 15 MTCAACAARIEKGLKRMPGVTDANVNL-ATETVNVIYDPAETGTAAIQEKIEK-LG 68 (151)
T ss_dssp CCSSHHHHHHHHHHTTSSSEEEEEEEG-GGTEEEEEECTTTSCHHHHHHHHHH-HT
T ss_pred CcCHHHHHHHHHHHhcCCCeeEEEEEc-cCCEEEEEEcCCcCCHHHHHHHHHH-cC
Confidence 799999999999999999999999998 6788888643 2578888888875 55
No 41
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=96.99 E-value=0.0014 Score=56.10 Aligned_cols=54 Identities=22% Similarity=0.346 Sum_probs=47.8
Q ss_pred CCchhHHHHHHHHHhcCCCeeEEEecCCCCCeEEEEee--ccCHHHHHHHHHhhcC-ce
Q 033712 1 MTCKKCRKKAMKIAVKADGVIKVEIKGEGKDELVVIGN--EVDSVKLTRKLQKKLG-FA 56 (113)
Q Consensus 1 m~Ce~C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~--~vDp~~l~~~LrKk~~-~a 56 (113)
|+|..|..++.+.|.+++||.++.++. ..++++|.-+ .+++..|.+.|.+ .| .+
T Consensus 11 M~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl-~~~~~~V~~d~~~~~~~~i~~ai~~-~Gy~~ 67 (723)
T 3j09_A 11 MTCAMCVKSIETAVGSLEGVEEVRVNL-ATETAFIRFDEKRIDFETIKRVIED-LGYGV 67 (723)
T ss_dssp CCSHHHHHHHHHHHHTSTTEEEEEEET-TTTEEEEEECTTTCCHHHHHHHHHH-HCCEE
T ss_pred CCchHHHHHHHHHHhcCCCceEEEEEc-CCCEEEEEeCCCcCCHHHHHHHHHh-cCCcc
Confidence 899999999999999999999999998 7789999753 3789999999986 66 44
No 42
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=92.34 E-value=0.3 Score=32.67 Aligned_cols=51 Identities=18% Similarity=0.306 Sum_probs=37.7
Q ss_pred HHHHHHhcCCCeeEEEe-----cCCCCC-eEEEEeeccCHHHHHHHHHhhcCceeEEec
Q 033712 9 KAMKIAVKADGVIKVEI-----KGEGKD-ELVVIGNEVDSVKLTRKLQKKLGFASLLSV 61 (113)
Q Consensus 9 kv~k~l~~~~GV~sV~v-----d~~~k~-kvtV~G~~vDp~~l~~~LrKk~~~aeivsv 61 (113)
.+-+.|++++||..|.+ |.+-.+ ++||.|+.+|-..+.+.|.+ .| +.|=|+
T Consensus 23 dlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~-~G-gvIHSI 79 (100)
T 3bpd_A 23 VFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIED-MG-GVIHSV 79 (100)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHT-TT-CEEEEE
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHH-cC-CeEEee
Confidence 35678999999988765 432223 89999999999999999997 44 333344
No 43
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=91.30 E-value=0.45 Score=31.68 Aligned_cols=46 Identities=26% Similarity=0.376 Sum_probs=34.9
Q ss_pred HHHHHHhcCCCeeEEEe-----cCCCCC-eEEEEeeccCHHHHHHHHHhhcC
Q 033712 9 KAMKIAVKADGVIKVEI-----KGEGKD-ELVVIGNEVDSVKLTRKLQKKLG 54 (113)
Q Consensus 9 kv~k~l~~~~GV~sV~v-----d~~~k~-kvtV~G~~vDp~~l~~~LrKk~~ 54 (113)
.+-+.|++++||..|.+ |.+-.+ ++||.|+.+|-..+.+.|.+-++
T Consensus 23 d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg 74 (97)
T 2raq_A 23 EYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGG 74 (97)
T ss_dssp HHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCC
Confidence 34577888999887754 442233 89999999999999999997443
No 44
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=91.16 E-value=0.49 Score=31.42 Aligned_cols=46 Identities=20% Similarity=0.228 Sum_probs=35.5
Q ss_pred HHHHHHhcCCCeeEEEe-----cCCCCC-eEEEEeeccCHHHHHHHHHhhcC
Q 033712 9 KAMKIAVKADGVIKVEI-----KGEGKD-ELVVIGNEVDSVKLTRKLQKKLG 54 (113)
Q Consensus 9 kv~k~l~~~~GV~sV~v-----d~~~k~-kvtV~G~~vDp~~l~~~LrKk~~ 54 (113)
.+-+.|++++||..|.+ |.+-.+ ++|+.|+.+|-..+.+.|.+-++
T Consensus 22 d~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg 73 (96)
T 2x3d_A 22 DLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGC 73 (96)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCC
Confidence 35678999999988765 432223 89999999999999999997433
No 45
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=83.94 E-value=4.7 Score=26.09 Aligned_cols=43 Identities=14% Similarity=0.089 Sum_probs=32.6
Q ss_pred HHHHHHHHhcCCCeeEEEecCCCCCeEEEEeeccCHHHHHHHHH
Q 033712 7 RKKAMKIAVKADGVIKVEIKGEGKDELVVIGNEVDSVKLTRKLQ 50 (113)
Q Consensus 7 ~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~~vDp~~l~~~Lr 50 (113)
...+...|..++||+--..+. ..++++|+=++-+...|.+.|.
T Consensus 19 ~~~V~~~L~~ipgvEi~~~~~-~~GkiVV~iEa~~~~~l~~~i~ 61 (95)
T 2jsx_A 19 ISDISTQLNAFPGCEVAVSDA-PSGQLIVVVEAEDSETLIQTIE 61 (95)
T ss_dssp HHHHHHHHTTSTTEEEEEEET-TTTEEEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHCCCCeEEEEecC-CCCCEEEEEEeCCHHHHHHHHH
Confidence 567899999999996545565 4678888877667777777764
No 46
>2k1h_A Uncharacterized protein Ser13; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Staphylococcus epidermidis}
Probab=59.19 E-value=31 Score=22.23 Aligned_cols=39 Identities=10% Similarity=0.089 Sum_probs=30.4
Q ss_pred HHHHHhcCCCeeEEEecCCCCCeEEEEee-ccCHHHHHHHHHh
Q 033712 10 AMKIAVKADGVIKVEIKGEGKDELVVIGN-EVDSVKLTRKLQK 51 (113)
Q Consensus 10 v~k~l~~~~GV~sV~vd~~~k~kvtV~G~-~vDp~~l~~~LrK 51 (113)
.-+.|-.++||.+|-+.. +=|||+-. .+|-..|.-.++.
T Consensus 41 LA~~LF~i~gVk~Vf~g~---dFITVtK~~~~dW~~ikp~I~~ 80 (94)
T 2k1h_A 41 FINRLFEIEGVKSIFYVL---DFISIDKEDNANWNELLPQIEN 80 (94)
T ss_dssp HHHHHHTSTTEEEEEEET---TEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhCCCCeeEEEEeC---CEEEEecCCCCCHHHHHHHHHH
Confidence 456677899999999875 78999885 4777877777664
No 47
>2cpq_A FragIle X mental retardation syndrome related protein 1, isoform B'; KH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=57.98 E-value=23 Score=22.73 Aligned_cols=37 Identities=16% Similarity=0.323 Sum_probs=25.8
Q ss_pred HHHHHHhcCCCeeEEEecCCCCCeEEEEeeccCHHHHHHH
Q 033712 9 KAMKIAVKADGVIKVEIKGEGKDELVVIGNEVDSVKLTRK 48 (113)
Q Consensus 9 kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~~vDp~~l~~~ 48 (113)
+..+.|....|+.+|.++- +.++|+|.|. |.+.+-++
T Consensus 35 k~Ik~I~e~tGv~~IdI~e-ddG~V~I~g~--~~ea~~~A 71 (91)
T 2cpq_A 35 SNIQQARKVPGVTAIELDE-DTGTFRIYGE--SADAVKKA 71 (91)
T ss_dssp HHHHHHHTSTTEEEEEEET-TTTEEEEEES--SHHHHHHH
T ss_pred HHHHHHHHHhCCeEEEEEc-CCCEEEEEEC--CHHHHHHH
Confidence 3456666778998899984 4589999994 35544433
No 48
>4ar0_A Type IV pilus biogenesis and competence protein P; transport, secretin type II secretion system; NMR {Neisseria meningitidis}
Probab=49.92 E-value=55 Score=21.86 Aligned_cols=47 Identities=9% Similarity=0.077 Sum_probs=36.4
Q ss_pred HHHHHHHHhcCCCeeEEEecCCCCCeEEEEeeccCHHHHHHHHHhhcC
Q 033712 7 RKKAMKIAVKADGVIKVEIKGEGKDELVVIGNEVDSVKLTRKLQKKLG 54 (113)
Q Consensus 7 ~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~~vDp~~l~~~LrKk~~ 54 (113)
.+.+.+.|+++.|.. +.+|.+-+++||+.=..+....++..+.+-.|
T Consensus 43 i~~vl~~la~~tg~N-iV~d~~V~G~VTl~l~~v~~~~al~~iL~~~g 89 (128)
T 4ar0_A 43 IRTILQILAKESGMN-IVASDSVNGKMTLSLKDVPWDQALDLVMQARN 89 (128)
T ss_dssp HHHHHHHHHHTTCCE-EEECTTCCCEEEEEEEEEEHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCc-EEEcCCCCceeeEeecCCCHHHHHHHHHHHcC
Confidence 367889999999974 55677678899987766777788888766556
No 49
>1pqx_A Conserved hypothetical protein; ZR18,structure, autostructure,spins,autoassign, northeast structural genomics consortium; NMR {Staphylococcus aureus subsp} SCOP: d.267.1.1 PDB: 2ffm_A
Probab=44.58 E-value=30 Score=22.21 Aligned_cols=39 Identities=15% Similarity=0.103 Sum_probs=29.1
Q ss_pred HHHHHhcCCCeeEEEecCCCCCeEEEEee-ccCHHHHHHHHHh
Q 033712 10 AMKIAVKADGVIKVEIKGEGKDELVVIGN-EVDSVKLTRKLQK 51 (113)
Q Consensus 10 v~k~l~~~~GV~sV~vd~~~k~kvtV~G~-~vDp~~l~~~LrK 51 (113)
.-+.|-.++||.+|-+.. +=|||+-. .+|-..|.-.++.
T Consensus 41 LA~~LF~i~gVk~Vf~g~---dFITVtK~~~~dW~~ikp~V~~ 80 (91)
T 1pqx_A 41 FINDILKVEGVKSIFHVM---DFISVDKENDANWETVLPKVEA 80 (91)
T ss_dssp HHHHHHHSTTEEEEEEET---TEEEEEECTTSCSTTTHHHHHH
T ss_pred HHHHhhCCCCeeEEEEeC---CEEEEecCCCCCHHHHHHHHHH
Confidence 456677899999999875 78999885 3666666666654
No 50
>3gzb_A Putative snoal-like polyketide cyclase; YP_001182657.1, STRU genomics, joint center for structural genomics, JCSG; HET: MSE; 1.44A {Shewanella putrefaciens} PDB: 3lza_A*
Probab=43.60 E-value=27 Score=24.58 Aligned_cols=34 Identities=9% Similarity=0.085 Sum_probs=29.2
Q ss_pred cCCCeeEEEecCCCCCeEEEEeeccCHHHHHHHHH
Q 033712 16 KADGVIKVEIKGEGKDELVVIGNEVDSVKLTRKLQ 50 (113)
Q Consensus 16 ~~~GV~sV~vd~~~k~kvtV~G~~vDp~~l~~~Lr 50 (113)
.++||..+.+|+ .+.+|+=--+-+|-..+...|.
T Consensus 119 aiPGVTtlklDm-~~~Rv~eh~DlmDyqTm~DQl~ 152 (154)
T 3gzb_A 119 AIPAVTSLKLDM-LNRRVTEHVDLIDYQTMSDQLA 152 (154)
T ss_dssp EEEEEEEEEEET-TTTEEEEEEEEECHHHHHHHHT
T ss_pred ecCceEEEeecC-CccchhhhHhHHhHHHHHHHhh
Confidence 589999999999 7789998888889888887764
No 51
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=42.70 E-value=17 Score=24.95 Aligned_cols=29 Identities=21% Similarity=0.343 Sum_probs=24.0
Q ss_pred eEEEEeeccCHHHHHHHHHhhcC-ceeEEec
Q 033712 32 ELVVIGNEVDSVKLTRKLQKKLG-FASLLSV 61 (113)
Q Consensus 32 kvtV~G~~vDp~~l~~~LrKk~~-~aeivsv 61 (113)
=|.|+|+ -|-.-|+++||.+.| .+.++++
T Consensus 112 ~vLvSgD-~DF~plv~~lr~~~G~~V~v~g~ 141 (165)
T 2qip_A 112 VILVSGD-GDFSLLVERIQQRYNKKVTVYGV 141 (165)
T ss_dssp EEEECCC-GGGHHHHHHHHHHHCCEEEEEEC
T ss_pred EEEEECC-hhHHHHHHHHHHHcCcEEEEEeC
Confidence 5678898 799999999998635 8888865
No 52
>3pro_C Alpha-lytic protease; Pro region, foldase, protein folding, serine protease, hydro hydrolase inhibitor complex; HET: AES; 1.80A {Lysobacter enzymogenes} SCOP: d.52.1.1 d.52.1.1 PDB: 2pro_A* 4pro_C
Probab=41.61 E-value=45 Score=23.61 Aligned_cols=44 Identities=14% Similarity=0.072 Sum_probs=28.3
Q ss_pred cCCCeeEEEecCCCCCeEEEEeeccCHHHHHHHHHhhcC-ceeEEec
Q 033712 16 KADGVIKVEIKGEGKDELVVIGNEVDSVKLTRKLQKKLG-FASLLSV 61 (113)
Q Consensus 16 ~~~GV~sV~vd~~~k~kvtV~G~~vDp~~l~~~LrKk~~-~aeivsv 61 (113)
.-.||.+..+|. ..|+|+|+-+.=.+... ..|.+.-| .+..|.|
T Consensus 112 ~~~~v~~W~VD~-~tN~VVV~a~~~~~~aa-~~f~~~AG~~~~av~V 156 (166)
T 3pro_C 112 PLDGVQSWYVDP-RSNAVVVKVDDGATDAG-VDFVALSGADSAQVRI 156 (166)
T ss_dssp -CTTEEEEEEEG-GGTEEEEEEETTCHHHH-HHHHHHHTCCTTTEEE
T ss_pred CCCCCceEEEeC-CCCeEEEEeCCCChHHH-HHHHHHhCCCCCceEE
Confidence 346789999999 88999998872234443 55555566 4443443
No 53
>3g74_A Protein of unknown function; APC21008.1, structural GE PSI-2, protein structure initiative, midwest center for STR genomics; 2.43A {Eubacterium ventriosum atcc 27560}
Probab=40.21 E-value=42 Score=21.73 Aligned_cols=26 Identities=12% Similarity=0.217 Sum_probs=22.3
Q ss_pred cCHHHHHHHHHhhcCceeEEecCCCc
Q 033712 40 VDSVKLTRKLQKKLGFASLLSVQEEK 65 (113)
Q Consensus 40 vDp~~l~~~LrKk~~~aeivsv~~~k 65 (113)
+|.-+|++++++.+++++|-.+|+..
T Consensus 60 isvm~II~~I~~~~P~l~I~~iGe~~ 85 (100)
T 3g74_A 60 VSIMKIIEMADQTFQNVDIQNIGETE 85 (100)
T ss_dssp EEHHHHHHHHHHHCSSEEEEECSCSE
T ss_pred EEHHHHHHHHHHHCCCceEEEcCCCc
Confidence 55889999999988999999988764
No 54
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C
Probab=36.73 E-value=25 Score=26.83 Aligned_cols=23 Identities=26% Similarity=0.502 Sum_probs=20.1
Q ss_pred CeEEEEeeccCHHHHHHHHHhhcC
Q 033712 31 DELVVIGNEVDSVKLTRKLQKKLG 54 (113)
Q Consensus 31 ~kvtV~G~~vDp~~l~~~LrKk~~ 54 (113)
-.|+|+|+ +|+..|...|++.++
T Consensus 190 ~~l~vvGd-~d~~~~~~~v~~~f~ 212 (445)
T 3ami_A 190 ATVVVVGD-VEHEAVFRLAEQTYG 212 (445)
T ss_dssp EEEEEEES-CCHHHHHHHHHHTGG
T ss_pred eEEEEEcC-CCHHHHHHHHHHHhc
Confidence 48999999 999999999987665
No 55
>2e9h_A EIF-5, eukaryotic translation initiation factor 5; zinc binding, C4 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.01 E-value=42 Score=23.73 Aligned_cols=27 Identities=22% Similarity=0.267 Sum_probs=22.2
Q ss_pred EecCCCCCeEEEEeeccCHHHHHHHHHhh
Q 033712 24 EIKGEGKDELVVIGNEVDSVKLTRKLQKK 52 (113)
Q Consensus 24 ~vd~~~k~kvtV~G~~vDp~~l~~~LrKk 52 (113)
.+|. +.++++|.|. +++..|.+.|++-
T Consensus 73 ~id~-~~~rlii~G~-~~~~~i~~~L~~y 99 (157)
T 2e9h_A 73 QFDV-KNDRYIVNGS-HEANKLQDMLDGF 99 (157)
T ss_dssp EEET-TTTEEEEEBC-CCHHHHHHHHHHH
T ss_pred eecC-CCCEEEEEee-eCHHHHHHHHHHH
Confidence 3563 4689999999 9999999999764
No 56
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=35.64 E-value=30 Score=21.88 Aligned_cols=21 Identities=29% Similarity=0.267 Sum_probs=17.6
Q ss_pred HHHHHHHHhcCCCeeEEEecC
Q 033712 7 RKKAMKIAVKADGVIKVEIKG 27 (113)
Q Consensus 7 ~~kv~k~l~~~~GV~sV~vd~ 27 (113)
+..+..+|..++||.+|.++.
T Consensus 62 ~~~i~~al~~l~gv~~v~V~l 82 (103)
T 1uwd_A 62 LSDAEEAIKKIEGVNNVEVEL 82 (103)
T ss_dssp HHHHHHHHHTSSSCCEEEEEE
T ss_pred HHHHHHHHHhCCCcceEEEEE
Confidence 467888899999999998865
No 57
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=35.18 E-value=30 Score=21.88 Aligned_cols=21 Identities=19% Similarity=0.224 Sum_probs=17.6
Q ss_pred HHHHHHHHhcCCCeeEEEecC
Q 033712 7 RKKAMKIAVKADGVIKVEIKG 27 (113)
Q Consensus 7 ~~kv~k~l~~~~GV~sV~vd~ 27 (113)
+..+..+|..++||.+|.++.
T Consensus 61 ~~~i~~al~~l~gv~~V~V~l 81 (103)
T 3cq1_A 61 GEAVRQALSRLPGVEEVEVEV 81 (103)
T ss_dssp HHHHHHHHHTSTTCCEEEEEE
T ss_pred HHHHHHHHHhCCCceeEEEEE
Confidence 567888899999999998865
No 58
>2ogh_A Eukaryotic translation initiation factor EIF-1; alpha-beta protein; NMR {Saccharomyces cerevisiae}
Probab=35.14 E-value=56 Score=21.40 Aligned_cols=40 Identities=18% Similarity=0.377 Sum_probs=26.4
Q ss_pred eeEEEecCCC-CCeEEEEee---ccCHHHHHHHHHhhcC-ceeEE
Q 033712 20 VIKVEIKGEG-KDELVVIGN---EVDSVKLTRKLQKKLG-FASLL 59 (113)
Q Consensus 20 V~sV~vd~~~-k~kvtV~G~---~vDp~~l~~~LrKk~~-~aeiv 59 (113)
.-.|.+.... +..||++.. .+|..+|++.|+|+++ ...+.
T Consensus 25 ~V~Ir~~~R~g~K~VT~V~Gl~~~~dlk~lak~lKkk~acggsV~ 69 (108)
T 2ogh_A 25 YIHIRIQQRNGRKTLTTVQGVPEEYDLKRILKVLKKDFACNGNIV 69 (108)
T ss_dssp SEEEEEECCSSSCCEEEEECCCTTSCHHHHHHHHHHHHCCCEEEE
T ss_pred eEEEEEEEccCCceEEEEeCCCcchhHHHHHHHHHHHhcCceEEe
Confidence 3345555422 236777654 3589999999999987 66543
No 59
>2g2k_A EIF-5, eukaryotic translation initiation factor 5; EIF125 fold; NMR {Homo sapiens}
Probab=34.71 E-value=43 Score=23.99 Aligned_cols=27 Identities=22% Similarity=0.267 Sum_probs=22.1
Q ss_pred EecCCCCCeEEEEeeccCHHHHHHHHHhh
Q 033712 24 EIKGEGKDELVVIGNEVDSVKLTRKLQKK 52 (113)
Q Consensus 24 ~vd~~~k~kvtV~G~~vDp~~l~~~LrKk 52 (113)
.+|. ..++++|.|. +++..|...|++-
T Consensus 66 ~id~-~~~rliinG~-~~~~~i~~~L~~y 92 (170)
T 2g2k_A 66 QFDV-KNDRYIVNGS-HEANKLQDMLDGF 92 (170)
T ss_dssp EECT-TTCCEEEEBC-CCHHHHHHHHHHH
T ss_pred eecC-CCCEEEEEee-eCHHHHHHHHHHH
Confidence 3564 4689999999 9999999998753
No 60
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=30.95 E-value=83 Score=20.89 Aligned_cols=29 Identities=14% Similarity=0.321 Sum_probs=15.4
Q ss_pred HHHHHhcCCCeeEEEecCCCCCeEEEEeeccCHH
Q 033712 10 AMKIAVKADGVIKVEIKGEGKDELVVIGNEVDSV 43 (113)
Q Consensus 10 v~k~l~~~~GV~sV~vd~~~k~kvtV~G~~vDp~ 43 (113)
+.+.+..++.+ .|+++ .+.||++|. ++..
T Consensus 69 aL~~~~~l~~i-~V~V~---~g~VtLsG~-v~s~ 97 (132)
T 2kgs_A 69 VFTASVPIPDF-GLKVE---RDTVTLTGT-APSS 97 (132)
T ss_dssp HHHHHTTCTTC-EEEEE---ETEEEEECE-ESSH
T ss_pred HHHhcCcCCce-EEEEE---CCEEEEEEE-ECCH
Confidence 34444445433 34443 367788887 6554
No 61
>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus}
Probab=30.85 E-value=37 Score=25.43 Aligned_cols=23 Identities=22% Similarity=0.190 Sum_probs=20.1
Q ss_pred CeEEEEeeccCHHHHHHHHHhhcC
Q 033712 31 DELVVIGNEVDSVKLTRKLQKKLG 54 (113)
Q Consensus 31 ~kvtV~G~~vDp~~l~~~LrKk~~ 54 (113)
-.|+|+|+ +|+..+.+.+.+.++
T Consensus 183 ~~l~v~Gd-~~~~~~~~~i~~~f~ 205 (406)
T 3eoq_A 183 MVLAATGR-VDFDRLLAEAERLTE 205 (406)
T ss_dssp EEEEEEES-CCHHHHHHHHHHHHT
T ss_pred EEEEEEcC-CCHHHHHHHHHHHhc
Confidence 48899999 999999999988665
No 62
>2ctf_A Vigilin; K homology type I domain, RNA-binding, cell sterol metabolism, beta-alpha-alpha-beta-BETA-alpha structure, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=30.27 E-value=99 Score=19.66 Aligned_cols=39 Identities=21% Similarity=0.335 Sum_probs=23.5
Q ss_pred HHHHHHhcCCCeeEEEecCCCCCeEEEEeeccCHHHHHHHH
Q 033712 9 KAMKIAVKADGVIKVEIKGEGKDELVVIGNEVDSVKLTRKL 49 (113)
Q Consensus 9 kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~~vDp~~l~~~L 49 (113)
.++++.....|| .|.+.. ..+.||+.|..-+..+....|
T Consensus 48 ~Ik~i~~~~~~v-~I~fp~-~~~~ItI~G~~~~V~~a~~~I 86 (102)
T 2ctf_A 48 NLAKITQQMPKV-HIEFTE-GEDKITLEGPTEDVSVAQEQI 86 (102)
T ss_dssp HHHHHHHHCSSS-EEEECS-SSCEEEEEECHHHHHHHHHHH
T ss_pred cHHHHHHHcCCc-EEEeCC-CCCEEEEECCHHHHHHHHHHH
Confidence 355555556676 566765 567999999933333333333
No 63
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=29.42 E-value=1e+02 Score=19.03 Aligned_cols=42 Identities=21% Similarity=0.362 Sum_probs=29.6
Q ss_pred HHHHHHHHHhcCCCeeEEEecCCCCCeEEEEeeccCHHHHHHHHHh
Q 033712 6 CRKKAMKIAVKADGVIKVEIKGEGKDELVVIGNEVDSVKLTRKLQK 51 (113)
Q Consensus 6 C~~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~~vDp~~l~~~LrK 51 (113)
.-+...+...++.|--..++|+ ..-.+.++|. |+.+.+.|.|
T Consensus 18 alkemirqarkfagtvtytldg-ndleiritgv---peqvrkelak 59 (85)
T 2kl8_A 18 ALKEMIRQARKFAGTVTYTLDG-NDLEIRITGV---PEQVRKELAK 59 (85)
T ss_dssp HHHHHHHHHTTTTCEEEEEECS-SCEEEEEESC---CHHHHHHHHH
T ss_pred HHHHHHHHHHhhcceEEEEecC-CeeEEEEecC---hHHHHHHHHH
Confidence 3455566778899988888886 3238888898 7777666654
No 64
>3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis}
Probab=29.19 E-value=40 Score=26.63 Aligned_cols=23 Identities=35% Similarity=0.546 Sum_probs=20.3
Q ss_pred CeEEEEeeccCHHHHHHHHHhhcC
Q 033712 31 DELVVIGNEVDSVKLTRKLQKKLG 54 (113)
Q Consensus 31 ~kvtV~G~~vDp~~l~~~LrKk~~ 54 (113)
-.|+|+|+ +|+..+.+.+.+.++
T Consensus 212 ~~l~vvGd-vd~~~~~~~i~~~f~ 234 (492)
T 3go9_A 212 MTLYVVGN-VDSRSIAAQISKAFS 234 (492)
T ss_dssp EEEEEEES-CCHHHHHHHHHHHHT
T ss_pred eEEEEEcC-CCHHHHHHHHHHHhh
Confidence 37999999 999999999988766
No 65
>1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B*
Probab=28.49 E-value=43 Score=25.23 Aligned_cols=23 Identities=39% Similarity=0.367 Sum_probs=19.8
Q ss_pred CeEEEEeeccCHHHHHHHHHhhcC
Q 033712 31 DELVVIGNEVDSVKLTRKLQKKLG 54 (113)
Q Consensus 31 ~kvtV~G~~vDp~~l~~~LrKk~~ 54 (113)
-.|+|+|+ +|+..+.+.|.+.++
T Consensus 189 ~~l~v~Gd-~~~~~~~~~i~~~f~ 211 (443)
T 1hr6_B 189 MVLAGAGA-VDHEKLVQYAQKYFG 211 (443)
T ss_dssp EEEEEEES-CCHHHHHHHHHHHHT
T ss_pred EEEEEEcC-CCHHHHHHHHHHHhc
Confidence 37899999 999999999987665
No 66
>1d1r_A Hypothetical 11.4 KD protein YCIH in PYRF-OSMB intergenic region; alpha-beta plait, open-faced beta sandwich, ferredoxin-like fold; NMR {Escherichia coli} SCOP: d.64.1.1
Probab=28.38 E-value=58 Score=21.82 Aligned_cols=46 Identities=26% Similarity=0.497 Sum_probs=27.9
Q ss_pred HHHhcCCCeeEEEecCCCC--CeEEEEee----ccCHHHHHHHHHhhcC-cee
Q 033712 12 KIAVKADGVIKVEIKGEGK--DELVVIGN----EVDSVKLTRKLQKKLG-FAS 57 (113)
Q Consensus 12 k~l~~~~GV~sV~vd~~~k--~kvtV~G~----~vDp~~l~~~LrKk~~-~ae 57 (113)
..+-+-++.-.|.+....+ ..||++.. .+|..+|++.|+++++ ...
T Consensus 24 ~~~p~~~~~V~I~~er~gR~GK~VT~V~Gl~~~~~dlk~laK~LKkk~acgGt 76 (116)
T 1d1r_A 24 PVRPKGDGVVRIQRQTSGRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGGA 76 (116)
T ss_dssp ----CCCCEEEEEECCCSSSSCCCEEEECCCSCHHHHHHHHHHHTTSSSSCCB
T ss_pred cCCCCCCCeEEEEEEeCCCCCCeEEEEeCCcCchhhHHHHHHHHHHHhcCCcE
Confidence 4444556776776663223 36777655 2367899999999887 553
No 67
>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas}
Probab=28.34 E-value=46 Score=24.85 Aligned_cols=25 Identities=8% Similarity=0.177 Sum_probs=20.9
Q ss_pred CCCeEEEEeeccCHHHHHHHHHhhcC
Q 033712 29 GKDELVVIGNEVDSVKLTRKLQKKLG 54 (113)
Q Consensus 29 ~k~kvtV~G~~vDp~~l~~~LrKk~~ 54 (113)
.+-.|+|+|+ +|+..+.+.+.+.++
T Consensus 188 ~~~~l~v~Gd-~~~~~~~~~~~~~f~ 212 (424)
T 3amj_B 188 RTAVVTLVGD-ITRAEAETIAQQLTA 212 (424)
T ss_dssp TSCEEEEEES-CCHHHHHHHHHHTTT
T ss_pred CceEEEEEeC-CCHHHHHHHHHHHHh
Confidence 3458999999 999999999987655
No 68
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=28.08 E-value=1.9e+02 Score=21.80 Aligned_cols=43 Identities=14% Similarity=0.189 Sum_probs=32.6
Q ss_pred HHHHHHHHHhcCCCee--EEEecCCCCCeEEEEeeccCHHHHHHHHHhhcC
Q 033712 6 CRKKAMKIAVKADGVI--KVEIKGEGKDELVVIGNEVDSVKLTRKLQKKLG 54 (113)
Q Consensus 6 C~~kv~k~l~~~~GV~--sV~vd~~~k~kvtV~G~~vDp~~l~~~LrKk~~ 54 (113)
..+-|+++|.. .++. +|.-. .+++.|.++ |+..++++|++-+|
T Consensus 26 L~~nI~~~L~~-~~~~~~~v~~~---~gri~V~~~--~~~~~~~~L~~vfG 70 (307)
T 1vbk_A 26 LMNNIREALVT-EEVPYKEIFSR---HGRIIVKTN--SPKEAANVLVRVFG 70 (307)
T ss_dssp HHHHHHHHHHH-TTCCCSEEEEE---TTEEEEECS--CHHHHHHHHTTSTT
T ss_pred HHHHHHHHhcc-cCccceeEEEE---CCEEEEEcC--CHHHHHHHHhhcCC
Confidence 45677888887 7777 47654 489999863 89999999997556
No 69
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=27.30 E-value=34 Score=21.92 Aligned_cols=21 Identities=14% Similarity=0.175 Sum_probs=17.5
Q ss_pred HHHHHHHH-hcCCCeeEEEecC
Q 033712 7 RKKAMKIA-VKADGVIKVEIKG 27 (113)
Q Consensus 7 ~~kv~k~l-~~~~GV~sV~vd~ 27 (113)
+..+..+| ..++||.+|.+..
T Consensus 64 ~~~i~~al~~~l~Gv~~V~V~l 85 (108)
T 3lno_A 64 VSDVKKVLSTNVPEVNEIEVNV 85 (108)
T ss_dssp HHHHHHHHHHHCTTCCCEEEEE
T ss_pred HHHHHHHHHHhCCCCceEEEEE
Confidence 56788888 8999999998865
No 70
>1jrm_A MTH0637, conserved hypothetical protein MTH637; alpha-beta protein, structural genomics, OCSP, NESG; NMR {Methanothermobacterthermautotrophicus} SCOP: d.206.1.1
Probab=26.55 E-value=97 Score=20.14 Aligned_cols=46 Identities=17% Similarity=0.203 Sum_probs=31.0
Q ss_pred HHHHHHHHHhcCCCeeEEEecCCCCC--eEEEEeeccCHHHHHHHHHhhc
Q 033712 6 CRKKAMKIAVKADGVIKVEIKGEGKD--ELVVIGNEVDSVKLTRKLQKKL 53 (113)
Q Consensus 6 C~~kv~k~l~~~~GV~sV~vd~~~k~--kvtV~G~~vDp~~l~~~LrKk~ 53 (113)
.-..+.+.|++.=| .+|++-...++ |+..+-. +|+..|..+|+...
T Consensus 52 AN~ali~~LAk~l~-s~V~i~~G~tsR~K~v~I~~-~~~~~l~~~L~~~~ 99 (104)
T 1jrm_A 52 ANREIIKEFSETFG-RDVEIVSGQKSRQKTIRIQG-MGRDLFLKLVSEKF 99 (104)
T ss_dssp HHHHHHHHHHHHHS-SEEEECSCGGGSEEEEEEES-CCHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHhC-CCEEEEecCCCCceEEEEcC-CCHHHHHHHHHHHh
Confidence 34556677777777 88988653433 4444443 78999999998644
No 71
>2xzm_F EIF1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_F
Probab=26.52 E-value=65 Score=20.88 Aligned_cols=41 Identities=20% Similarity=0.308 Sum_probs=25.9
Q ss_pred CeeEEEecCCC-CCeEEEE-ee--ccCHHHHHHHHHhhcC-ceeEE
Q 033712 19 GVIKVEIKGEG-KDELVVI-GN--EVDSVKLTRKLQKKLG-FASLL 59 (113)
Q Consensus 19 GV~sV~vd~~~-k~kvtV~-G~--~vDp~~l~~~LrKk~~-~aeiv 59 (113)
+.-.|.+.... +..||++ |- .+|..+|++.|+|+++ ...+.
T Consensus 17 ~~v~I~~~~R~g~K~VT~V~Gl~~~~dlk~laK~lKkk~acggsV~ 62 (101)
T 2xzm_F 17 THIHIRVEQRRGRKCFTTVEGIPPEFDYEKIMKYWKKWLSCNATIV 62 (101)
T ss_dssp CCEEEEEEEEETTEEEEEEECCCTTSCTHHHHHHHHHHHTSCCCEE
T ss_pred CeEEEEEEeccCCccEEEEecCCCchhHHHHHHHHHHHhcCCeEEe
Confidence 33344444311 2367766 42 4689999999999987 66543
No 72
>1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ...
Probab=26.43 E-value=49 Score=25.11 Aligned_cols=23 Identities=22% Similarity=0.252 Sum_probs=19.7
Q ss_pred CeEEEEeeccCHHHHHHHHHhhcC
Q 033712 31 DELVVIGNEVDSVKLTRKLQKKLG 54 (113)
Q Consensus 31 ~kvtV~G~~vDp~~l~~~LrKk~~ 54 (113)
-.|.|+|+ +|+..+.+.|.+.++
T Consensus 195 ~~l~v~Gd-~~~~~~~~~i~~~f~ 217 (446)
T 1pp9_A 195 MVLAAAGG-LEHRQLLDLAQKHFS 217 (446)
T ss_dssp EEEEEEES-CCHHHHHHHHHHHHT
T ss_pred EEEEEEcC-CCHHHHHHHHHHHhc
Confidence 37899999 999999999987665
No 73
>2pb9_A Phosphomethylpyrimidine kinase; phosphate, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.70A {Pyrococcus furiosus} SCOP: c.74.1.2
Probab=25.23 E-value=1.6e+02 Score=21.22 Aligned_cols=41 Identities=7% Similarity=0.049 Sum_probs=32.0
Q ss_pred HHHHHhcCCCeeEEEecCCCCC---eEEEEeeccCHHHHHHHHHhh
Q 033712 10 AMKIAVKADGVIKVEIKGEGKD---ELVVIGNEVDSVKLTRKLQKK 52 (113)
Q Consensus 10 v~k~l~~~~GV~sV~vd~~~k~---kvtV~G~~vDp~~l~~~LrKk 52 (113)
+..++.+..|+-.|-+|....+ .+.|-|. ||..|+++|++-
T Consensus 143 i~~a~~~~~~~PdvIyd~G~~GkEP~i~vfG~--dp~ev~~kv~~l 186 (195)
T 2pb9_A 143 IETAIKRIKERPDIIYHLGDVGKEPMILVFGR--NPREVLEKIKML 186 (195)
T ss_dssp HHHHHHHSSSCEEEEEECCBTTBCCEEEEEES--SHHHHHHHHHHT
T ss_pred HHHHHHhcCCCCeEEEeCCCCCCCcEEEEECC--CHHHHHHHHHHH
Confidence 6677888888999999874444 5668886 799999999863
No 74
>2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=24.85 E-value=1.5e+02 Score=22.13 Aligned_cols=52 Identities=15% Similarity=0.242 Sum_probs=34.6
Q ss_pred HHHHHHHhcCCCeeEEEecCCCCCeEEEEeeccCHHHHHHHHHhhcCceeEEec
Q 033712 8 KKAMKIAVKADGVIKVEIKGEGKDELVVIGNEVDSVKLTRKLQKKLGFASLLSV 61 (113)
Q Consensus 8 ~kv~k~l~~~~GV~sV~vd~~~k~kvtV~G~~vDp~~l~~~LrKk~~~aeivsv 61 (113)
..+.+.+...+||.-.-++. -+++||.|+.-+...|...|+.....+..+.|
T Consensus 138 ~~v~~~l~~~~~v~iA~~Ns--p~~~visG~~~~l~~~~~~l~~~g~~~~~L~v 189 (305)
T 2cuy_A 138 EEIQKALEGLEGVEIANLNA--PEQTVISGRRQAVEEAAERLKERRARVVFLPV 189 (305)
T ss_dssp HHHHHHHTTCSSEEEEEEEE--TTEEEEEEEHHHHHHHHHHHHHTTCEEEECSC
T ss_pred HHHHHHHhhcCCeEEEEEec--CCcEEEEcCHHHHHHHHHHHHhCCceEEECCC
Confidence 45666777777755555553 57999999955667777888764335655554
No 75
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=24.18 E-value=1.8e+02 Score=20.07 Aligned_cols=50 Identities=16% Similarity=0.234 Sum_probs=32.5
Q ss_pred HHHHHHhcCC---CeeEEEecCCCCCeEEEEeecc-C----HHHHHHHHHhhcC-ceeEEe
Q 033712 9 KAMKIAVKAD---GVIKVEIKGEGKDELVVIGNEV-D----SVKLTRKLQKKLG-FASLLS 60 (113)
Q Consensus 9 kv~k~l~~~~---GV~sV~vd~~~k~kvtV~G~~v-D----p~~l~~~LrKk~~-~aeivs 60 (113)
++.++|..+. |..+|+++. .-.+|.|+|.++ + ..++.+.|.+ -+ +...+|
T Consensus 73 ~a~~~L~~~~~el~~~~v~~~~-~va~VsvVG~gm~~~~Gvaa~~f~aLa~-~~InI~~Is 131 (181)
T 3s1t_A 73 AAVEKLDSLRNEIGFSQLLYDD-HIGKVSLIGAGMRSHPGVTATFCEALAA-VGVNIELIS 131 (181)
T ss_dssp HHHHHHHHTHHHHCCSEEEEES-CEEEEEEEEECCTTCHHHHHHHHHHHHH-TTCCCCEEE
T ss_pred HHHHHHHHHHHhcCcceEEEeC-CEEEEEEEecccccCchHHHHHHHHHHH-CCCcEEEEE
Confidence 4455555442 677888875 456999999987 3 4566777764 34 555554
No 76
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=23.44 E-value=50 Score=20.08 Aligned_cols=22 Identities=9% Similarity=0.202 Sum_probs=15.9
Q ss_pred cCCCe--eEEEecCCCCCeEEEEee
Q 033712 16 KADGV--IKVEIKGEGKDELVVIGN 38 (113)
Q Consensus 16 ~~~GV--~sV~vd~~~k~kvtV~G~ 38 (113)
.++|+ +.|.+.. ..+.|+|.|.
T Consensus 14 dlPG~~~edi~V~v-~~~~L~I~g~ 37 (85)
T 3q9p_A 14 DVNHFAPDELTVKT-KDGVVEITGK 37 (85)
T ss_dssp ECTTTCCSEEEEEE-ETTEEEEEEE
T ss_pred ECCCCChHHEEEEE-ECCEEEEEEE
Confidence 35665 4666666 4589999998
No 77
>2yy3_A Elongation factor 1-beta; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 2.50A {Pyrococcus horikoshii}
Probab=22.69 E-value=61 Score=20.75 Aligned_cols=21 Identities=10% Similarity=0.080 Sum_probs=17.4
Q ss_pred HHHHHHHHhcCCCeeEEEecC
Q 033712 7 RKKAMKIAVKADGVIKVEIKG 27 (113)
Q Consensus 7 ~~kv~k~l~~~~GV~sV~vd~ 27 (113)
-..+...++.++||+|+++..
T Consensus 67 tD~lee~i~~~e~VqSvdV~~ 87 (91)
T 2yy3_A 67 FDEVAEKFEEVENVESAEVET 87 (91)
T ss_dssp HHHHHHHHHHSTTEEEEEEEE
T ss_pred cHHHHHHHhcCCCceEEEEEE
Confidence 556778899999999998853
No 78
>1gh8_A Translation elongation factor 1BETA; alpha-beta sandwich, gene regulation, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.58.12.1
Probab=21.76 E-value=64 Score=20.53 Aligned_cols=21 Identities=19% Similarity=0.287 Sum_probs=16.8
Q ss_pred HHHHHHHHhcCCCeeEEEecC
Q 033712 7 RKKAMKIAVKADGVIKVEIKG 27 (113)
Q Consensus 7 ~~kv~k~l~~~~GV~sV~vd~ 27 (113)
-..+...++.++||+|+++..
T Consensus 64 td~lee~i~~~e~Vqsvdv~~ 84 (89)
T 1gh8_A 64 TEAAEESLSGIEGVSNIEVTD 84 (89)
T ss_dssp GGHHHHHHTTSCSSEEEEEEE
T ss_pred hHHHHHHHhccCCccEEEEEE
Confidence 345677899999999998853
No 79
>3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis}
Probab=20.69 E-value=75 Score=23.47 Aligned_cols=22 Identities=27% Similarity=0.530 Sum_probs=18.6
Q ss_pred CeEEEEeeccCHHHHHHHHHhhcC
Q 033712 31 DELVVIGNEVDSVKLTRKLQKKLG 54 (113)
Q Consensus 31 ~kvtV~G~~vDp~~l~~~LrKk~~ 54 (113)
-.++|+|+ +|+..+.+.+ +.++
T Consensus 201 ~~l~v~G~-~~~~~~~~~~-~~~~ 222 (425)
T 3d3y_A 201 VDIFVLGD-VNEAELVPLF-KQLP 222 (425)
T ss_dssp EEEEEEES-CCHHHHHHHH-HTSC
T ss_pred eEEEEECC-CCHHHHHHHH-HhCC
Confidence 37899999 9999999999 6554
Done!