BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033719
(112 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O49884|RL30_LUPLU 60S ribosomal protein L30 OS=Lupinus luteus GN=RPL30 PE=3 SV=1
Length = 112
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 100/112 (89%), Positives = 109/112 (97%)
Query: 1 MVTSKKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 60
MV +KKTKKTHESINNRLALVMKSGKYTLGYKTVL+SLRSSKGKLI+++NNCPPLRKSEI
Sbjct: 1 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60
Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGEH 112
EYYAMLAKVGVHHYNGNNVDLGTACGKY+RV CLSI+DPGDSDIIK+LPG+
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKTLPGDQ 112
>sp|Q9M5M6|RL30_EUPES 60S ribosomal protein L30 OS=Euphorbia esula GN=RPL30 PE=3 SV=1
Length = 112
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 99/112 (88%), Positives = 108/112 (96%)
Query: 1 MVTSKKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 60
MV +KKTKKTHESIN+RLALVMKSGK+TLGYKTVL SLRS+KGKLI+++NNCPPLRKSEI
Sbjct: 1 MVAAKKTKKTHESINSRLALVMKSGKFTLGYKTVLESLRSNKGKLIIIANNCPPLRKSEI 60
Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGEH 112
EYYAMLAKVGVHHYNGNNVDLGTACGKYFRV CLSIID GDSDIIKS+PG+H
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVCCLSIIDAGDSDIIKSIPGDH 112
>sp|Q8VZ19|RL302_ARATH 60S ribosomal protein L30-2 OS=Arabidopsis thaliana GN=RPL30B PE=3
SV=1
Length = 112
Score = 208 bits (530), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 98/112 (87%), Positives = 107/112 (95%)
Query: 1 MVTSKKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 60
MVT KKTKK+HE IN+RLALVMKSGKYTLGYK+VL+SLR SKGKLIL+S NCPPLR+SEI
Sbjct: 1 MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60
Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGEH 112
EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSI+DPGDSDIIKS+PG+
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIPGDQ 112
>sp|Q9C8F7|RL301_ARATH Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana
GN=RPL30A PE=3 SV=1
Length = 112
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/112 (87%), Positives = 108/112 (96%)
Query: 1 MVTSKKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 60
MV +KKTKK+HE IN+RLALVMKSGKYTLGYK+VL+SLRSSKGKLIL+S+NCPPLR+SEI
Sbjct: 1 MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60
Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGEH 112
EYYAMLAKVGVHHYN NNVDLGTACGKYFRVSCLSI+DPGDSDIIKSLPG+
Sbjct: 61 EYYAMLAKVGVHHYNRNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGDQ 112
>sp|Q9LSA3|RL303_ARATH 60S ribosomal protein L30-3 OS=Arabidopsis thaliana GN=RPL30C PE=3
SV=1
Length = 112
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 96/112 (85%), Positives = 106/112 (94%)
Query: 1 MVTSKKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 60
MV KK KK+HE IN+RLALVMKSGKYTLGYK+VL+SLRSSKGKLIL+S+NCPPLR+SEI
Sbjct: 1 MVAEKKAKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60
Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGEH 112
EYYAMLAKVGVH YNGNNVDLGTACGKYFRVSCLSI+DPGDSDIIK+LPG+
Sbjct: 61 EYYAMLAKVGVHRYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKTLPGDQ 112
>sp|O48558|RL30_MAIZE 60S ribosomal protein L30 OS=Zea mays GN=RPL30 PE=3 SV=1
Length = 112
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 90/112 (80%), Positives = 104/112 (92%)
Query: 1 MVTSKKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 60
MV +KKTKK+ ++INN+L LVMKSGKYTLGYKTVLR+LR+SK KL++++NNCPPLRKSEI
Sbjct: 1 MVATKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKSKLVIIANNCPPLRKSEI 60
Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGEH 112
EYYAMLAKV VHH++GNNVDLGTACGKYFRV CLSIIDPGDSDIIK+ PGE
Sbjct: 61 EYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKTTPGEQ 112
>sp|Q9SDG6|RL30_ORYSJ 60S ribosomal protein L30 OS=Oryza sativa subsp. japonica GN=RPL30
PE=3 SV=1
Length = 111
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 90/112 (80%), Positives = 103/112 (91%), Gaps = 1/112 (0%)
Query: 1 MVTSKKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 60
MV +KKTKK+ ++INN+L LVMKSGKYTLGYKTVLR+LR+SK KL+++SNNCPPLRKSEI
Sbjct: 1 MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVIISNNCPPLRKSEI 60
Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGEH 112
EYYAMLAKV VHH++GNNVDLGTACGKYFRV CLSIIDPGDSDIIK+ GE
Sbjct: 61 EYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKT-TGEQ 111
>sp|P67884|RL30_OPHHA 60S ribosomal protein L30 OS=Ophiophagus hannah GN=RPL30 PE=3 SV=2
Length = 115
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 80/111 (72%), Positives = 96/111 (86%)
Query: 1 MVTSKKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 60
MV +KKTKK+ ESIN+RL LVMKSGKY LGYK L+ +R K KL++L+NNCP LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGE 111
EYYAMLAK GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDII+S+P +
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPEQ 111
>sp|P67883|RL30_CHICK 60S ribosomal protein L30 OS=Gallus gallus GN=RPL30 PE=3 SV=2
Length = 115
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 80/111 (72%), Positives = 96/111 (86%)
Query: 1 MVTSKKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 60
MV +KKTKK+ ESIN+RL LVMKSGKY LGYK L+ +R K KL++L+NNCP LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGE 111
EYYAMLAK GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDII+S+P +
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPEQ 111
>sp|P62890|RL30_RAT 60S ribosomal protein L30 OS=Rattus norvegicus GN=Rpl30 PE=3 SV=2
Length = 115
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 80/111 (72%), Positives = 96/111 (86%)
Query: 1 MVTSKKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 60
MV +KKTKK+ ESIN+RL LVMKSGKY LGYK L+ +R K KL++L+NNCP LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGE 111
EYYAMLAK GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDII+S+P +
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPEQ 111
>sp|P62889|RL30_MOUSE 60S ribosomal protein L30 OS=Mus musculus GN=Rpl30 PE=2 SV=2
Length = 115
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 80/111 (72%), Positives = 96/111 (86%)
Query: 1 MVTSKKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 60
MV +KKTKK+ ESIN+RL LVMKSGKY LGYK L+ +R K KL++L+NNCP LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGE 111
EYYAMLAK GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDII+S+P +
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPEQ 111
>sp|Q76KA2|RL30_MACFA 60S ribosomal protein L30 OS=Macaca fascicularis GN=RPL30 PE=3 SV=3
Length = 115
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 80/111 (72%), Positives = 96/111 (86%)
Query: 1 MVTSKKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 60
MV +KKTKK+ ESIN+RL LVMKSGKY LGYK L+ +R K KL++L+NNCP LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGE 111
EYYAMLAK GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDII+S+P +
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPEQ 111
>sp|P62888|RL30_HUMAN 60S ribosomal protein L30 OS=Homo sapiens GN=RPL30 PE=1 SV=2
Length = 115
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 80/111 (72%), Positives = 96/111 (86%)
Query: 1 MVTSKKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 60
MV +KKTKK+ ESIN+RL LVMKSGKY LGYK L+ +R K KL++L+NNCP LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGE 111
EYYAMLAK GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDII+S+P +
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPEQ 111
>sp|Q3T0D5|RL30_BOVIN 60S ribosomal protein L30 OS=Bos taurus GN=RPL30 PE=3 SV=3
Length = 115
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 80/111 (72%), Positives = 96/111 (86%)
Query: 1 MVTSKKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 60
MV +KKTKK+ ESIN+RL LVMKSGKY LGYK L+ +R K KL++L+NNCP LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGE 111
EYYAMLAK GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDII+S+P +
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPEQ 111
>sp|P58372|RL30_ICTPU 60S ribosomal protein L30 OS=Ictalurus punctatus GN=rpl30 PE=3 SV=2
Length = 116
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 78/112 (69%), Positives = 95/112 (84%)
Query: 1 MVTSKKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 60
MV +KKTKK+ ESIN+RL LVMKSGKY LGYK + +R K KL++L+NNCP LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQSQKMIRQGKAKLVILANNCPALRKSEI 60
Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGEH 112
EYYAML+K GVHHY+GNN++LGTACGKY+RV L+IIDPGDSDII+S+P +
Sbjct: 61 EYYAMLSKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPDQQ 112
>sp|P58375|RL30_SPOFR 60S ribosomal protein L30 OS=Spodoptera frugiperda GN=RpL30 PE=3
SV=1
Length = 113
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 78/109 (71%), Positives = 93/109 (85%)
Query: 1 MVTSKKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 60
MV +KK KKT ESIN+RLALVMKSGKY LGYK L++LR K KL++++ N PPLRKSEI
Sbjct: 1 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 60
Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLP 109
EYYA+LAK GVHHY+GNN++LGTACGKY+RV L+I DPGDSDII +LP
Sbjct: 61 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLP 109
>sp|Q5I7K9|RL30_WHEAT 60S ribosomal protein L30 OS=Triticum aestivum PE=1 SV=2
Length = 112
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 78/100 (78%), Positives = 91/100 (91%)
Query: 1 MVTSKKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 60
M +KK KK+ E+INN+L LVMKSGKYTLGYKTVL++LRSS GKLI+L+NNCPPLRKSEI
Sbjct: 1 MAPTKKAKKSGENINNKLQLVMKSGKYTLGYKTVLKTLRSSLGKLIILANNCPPLRKSEI 60
Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPG 100
E YAMLAK+ VHH++GNNVDLGTACGKY+RV CLSI+DPG
Sbjct: 61 ETYAMLAKISVHHFHGNNVDLGTACGKYYRVCCLSILDPG 100
>sp|P58374|RL30_BRABE 60S ribosomal protein L30 OS=Branchiostoma belcheri GN=RPL30 PE=3
SV=1
Length = 114
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 76/107 (71%), Positives = 89/107 (83%)
Query: 5 KKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYA 64
K+ +KT ESIN+RL LVMKSGKY LG K L+ LR K KLI+++NN P LRKSEIEYYA
Sbjct: 2 KQKRKTMESINSRLQLVMKSGKYVLGLKETLKVLRQGKAKLIIIANNTPALRKSEIEYYA 61
Query: 65 MLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGE 111
MLAK GVHHY+GNN++LGTACGKYFRV L+I DPGDSDII+S+P E
Sbjct: 62 MLAKTGVHHYSGNNIELGTACGKYFRVCTLAITDPGDSDIIRSMPAE 108
>sp|P52808|RL30A_SCHPO 60S ribosomal protein L30-1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl30a PE=3 SV=2
Length = 109
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/106 (66%), Positives = 87/106 (82%)
Query: 2 VTSKKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIE 61
V +KK+KK+ ++IN +LAL MKSGKY LGYK+ L++LRS K KLIL++ NCPPLRKSE+E
Sbjct: 4 VVTKKSKKSGDTINAKLALTMKSGKYVLGYKSTLKTLRSGKAKLILIAGNCPPLRKSELE 63
Query: 62 YYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKS 107
YYAML+K VHHY G N+DLGTACGK FRV L+I D GDSDI+ +
Sbjct: 64 YYAMLSKANVHHYAGTNIDLGTACGKLFRVGVLAITDAGDSDILDA 109
>sp|Q9UTP0|RL30B_SCHPO 60S ribosomal protein L30-2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl30b PE=3 SV=1
Length = 117
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 69/104 (66%), Positives = 88/104 (84%)
Query: 4 SKKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYY 63
SKK KK+ ++IN++LAL MKSGKY LGYK+ L++LRS K KLIL++ N PPLRKSE+EYY
Sbjct: 14 SKKGKKSGDTINSKLALTMKSGKYVLGYKSTLKTLRSGKAKLILIAANAPPLRKSELEYY 73
Query: 64 AMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKS 107
AML++ VHHY+GNN+DLGTACGK FRV L++ID GDSDI+ +
Sbjct: 74 AMLSRCSVHHYSGNNIDLGTACGKLFRVGVLAVIDAGDSDILAA 117
>sp|Q55BS9|RL30_DICDI 60S ribosomal protein L30 OS=Dictyostelium discoideum GN=rpl30 PE=3
SV=1
Length = 112
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 68/108 (62%), Positives = 89/108 (82%)
Query: 1 MVTSKKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEI 60
MV+ KK KK+ E+I ++LALVMKSGK LGYK+ L++LR+ K KLILL++N P +R+SEI
Sbjct: 1 MVSVKKVKKSQENIGSKLALVMKSGKSQLGYKSTLKTLRAGKSKLILLASNLPSIRRSEI 60
Query: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSL 108
EYYAML+K VH Y+GNNVDLGTA G+++RVS +SI D GDSDI+ +L
Sbjct: 61 EYYAMLSKTTVHLYSGNNVDLGTALGRHYRVSVMSITDAGDSDILTAL 108
>sp|Q7S7F1|RL30_NEUCR 60S ribosomal protein L30 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rpl-30
PE=3 SV=1
Length = 109
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 62/101 (61%), Positives = 81/101 (80%)
Query: 5 KKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYA 64
KK+K +SI +LALV+KSGK LGY++ L++LRS K KLIL+S N PPLRKSE+EYY+
Sbjct: 4 KKSKSDAQSIGAKLALVIKSGKVVLGYRSTLKALRSGKAKLILISANTPPLRKSELEYYS 63
Query: 65 MLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDII 105
M++K VHHY G N++LGTACGK FR S ++I+D GDSDI+
Sbjct: 64 MMSKTAVHHYTGTNIELGTACGKLFRCSTMAILDAGDSDIL 104
>sp|P0DJ59|RL30_TETTS 60S ribosomal protein L30 OS=Tetrahymena thermophila (strain SB210)
GN=RPL30 PE=1 SV=1
Length = 104
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 83/100 (83%)
Query: 8 KKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLA 67
K T ++I ++LALVM+SGK TLGYK+ ++++R+ KL+ +SNNCP +RKSEIEYYA LA
Sbjct: 4 KVTQDNIQSKLALVMRSGKATLGYKSTIKAIRNGTAKLVFISNNCPTVRKSEIEYYASLA 63
Query: 68 KVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKS 107
++ +HH+ G+NV+LGTACGKY R S ++I+D GDSDI+K+
Sbjct: 64 QISIHHFVGSNVELGTACGKYHRCSTMAILDAGDSDILKT 103
>sp|Q6C4U7|RL30_YARLI 60S ribosomal protein L30 OS=Yarrowia lipolytica (strain CLIB 122 /
E 150) GN=RPL30 PE=3 SV=1
Length = 109
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 58/106 (54%), Positives = 84/106 (79%)
Query: 2 VTSKKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIE 61
+T+ K+KK+ +++N +L L +KSGKYTLGYK+ +++LR K KL++++ N P LRKSEIE
Sbjct: 1 MTAPKSKKSGDNVNAKLGLAIKSGKYTLGYKSTIKALRQGKAKLVIIAGNTPALRKSEIE 60
Query: 62 YYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKS 107
YYAMLAK VHH+ G N +LGT+CG+ FRV ++I+D GDSDI+ +
Sbjct: 61 YYAMLAKCTVHHFQGGNNELGTSCGRLFRVGAVTIMDAGDSDILTA 106
>sp|Q6FXZ0|RL30_CANGA 60S ribosomal protein L30 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPL30
PE=3 SV=1
Length = 105
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 80/101 (79%)
Query: 9 KTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAK 68
KT ESIN +LALV+KSGK+TLGYK+ ++SLR K KLI+++ N P LRKSE+EYYAML+K
Sbjct: 5 KTQESINQKLALVVKSGKFTLGYKSTIKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSK 64
Query: 69 VGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLP 109
V+++ G N +LGTA GK FRV +S++D GDSDI+ +L
Sbjct: 65 TKVYYFQGGNNELGTAVGKLFRVGVVSVLDAGDSDILTALA 105
>sp|P14120|RL30_YEAST 60S ribosomal protein L30 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL30 PE=1 SV=3
Length = 105
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 80/101 (79%)
Query: 9 KTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAK 68
K+ ESIN +LALV+KSGKYTLGYK+ ++SLR K KLI+++ N P LRKSE+EYYAML+K
Sbjct: 5 KSQESINQKLALVIKSGKYTLGYKSTVKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSK 64
Query: 69 VGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLP 109
V+++ G N +LGTA GK FRV +SI++ GDSDI+ +L
Sbjct: 65 TKVYYFQGGNNELGTAVGKLFRVGVVSILEAGDSDILTTLA 105
>sp|P49153|RL30_TRYBB 60S ribosomal protein L30 OS=Trypanosoma brucei brucei GN=RPL30
PE=3 SV=1
Length = 105
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 78/101 (77%)
Query: 4 SKKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYY 63
+KK K ++IN ++ LVMKSGKY LG + L++LR + KL+++S NCPP+RK+EIEYY
Sbjct: 2 AKKVKSKVDTINTKIQLVMKSGKYVLGTQQSLKTLRQGRSKLVVISANCPPIRKAEIEYY 61
Query: 64 AMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDI 104
L+K +HHY+GNN+DLGTACG++FR LSI D GDSDI
Sbjct: 62 CTLSKTPIHHYSGNNLDLGTACGRHFRACVLSITDVGDSDI 102
>sp|Q752U5|RL30_ASHGO 60S ribosomal protein L30 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPL30 PE=3 SV=3
Length = 105
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 79/101 (78%)
Query: 9 KTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAK 68
K E+IN +LALV+KSGKYTLGYK+ ++SLR K KLI+++ N P LRKSE+EYYAML+K
Sbjct: 5 KNQENINQKLALVIKSGKYTLGYKSTIKSLRQGKAKLIIIAANTPVLRKSELEYYAMLSK 64
Query: 69 VGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLP 109
V+++ G N +LGTA GK FRV ++++D GDSDI+ +L
Sbjct: 65 TKVYYFQGGNNELGTAVGKLFRVGVVTVLDAGDSDILTTLA 105
>sp|P39095|RL30_LEIMA 60S ribosomal protein L30 OS=Leishmania major GN=RPL30 PE=3 SV=1
Length = 104
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 77/101 (76%)
Query: 4 SKKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYY 63
+KKTK +IN +L LVMKSGKY LG + L +LR + KL++++NNCPP+R++E+EYY
Sbjct: 2 AKKTKSKVNTINAKLQLVMKSGKYVLGTQQALTTLRQGRSKLVVIANNCPPIRRAEVEYY 61
Query: 64 AMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDI 104
L+K +HHY+GNN+DLGTACGK FR LS+ + GDSDI
Sbjct: 62 CTLSKTPIHHYSGNNLDLGTACGKPFRTCVLSVTNVGDSDI 102
>sp|P38664|RL30_KLULA 60S ribosomal protein L30 OS=Kluyveromyces lactis (strain ATCC 8585
/ CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=RPL30 PE=3 SV=2
Length = 105
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 79/101 (78%)
Query: 9 KTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAK 68
K E+IN +LALV+KSGKY+LGYK+ ++SLR K KLI+++ N P LRKSE+EYYAML+K
Sbjct: 5 KNQENINQKLALVVKSGKYSLGYKSTVKSLRQGKAKLIIIAANTPVLRKSELEYYAMLSK 64
Query: 69 VGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLP 109
V+++ G N +LGTA GK FRV ++I+D GDSDI+ +L
Sbjct: 65 TKVYYFQGGNNELGTAVGKLFRVGVVTILDAGDSDILTALA 105
>sp|O27127|RL30E_METTH 50S ribosomal protein L30e OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rpl30e PE=3 SV=1
Length = 98
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 62/94 (65%)
Query: 13 SINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVH 72
I+ + + + +G LG K ++SL+ KGKL+++++N P K +IEYYA L+++ V+
Sbjct: 2 DIDRGIRVAVDTGNVILGSKRTIQSLKLGKGKLVVMASNIPEDLKEDIEYYAKLSEIPVY 61
Query: 73 HYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIK 106
+ G +V+LG+ CGK F V L I DPGDS I++
Sbjct: 62 THEGTSVELGSVCGKPFTVGALLIQDPGDSTILE 95
>sp|A1RSE6|RL30E_PYRIL 50S ribosomal protein L30e OS=Pyrobaculum islandicum (strain DSM
4184 / JCM 9189) GN=rpl30e PE=3 SV=1
Length = 101
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 61/93 (65%)
Query: 14 INNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHH 73
I+ L + + +GK +G+K V +++ +S KL++L+ N P K ++EYYA LA V V
Sbjct: 4 ISRELQVAISTGKVVMGFKEVKKTILTSTPKLVILAANAPKWAKEDVEYYAKLAGVPVFI 63
Query: 74 YNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIK 106
+ G++++LG A + ++ L++IDPG S+I+K
Sbjct: 64 FPGSSIELGAAAKRPHKIMALAVIDPGQSEILK 96
>sp|Q8U0M6|RL30E_PYRFU 50S ribosomal protein L30e OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rpl30e PE=1 SV=1
Length = 99
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 54/84 (64%)
Query: 22 MKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDL 81
M++GK LG +R ++ KLI+++ N P K +I YYA L+ + V+ + G +V+L
Sbjct: 11 METGKVVLGSNETIRLAKTGGAKLIIVAKNAPKEIKDDIYYYAKLSDIPVYEFEGTSVEL 70
Query: 82 GTACGKYFRVSCLSIIDPGDSDII 105
GT GK F V+ L+I+DPG+S I+
Sbjct: 71 GTLLGKPFVVASLAIVDPGESKIL 94
>sp|A5ULN4|RL30E_METS3 50S ribosomal protein L30e OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=rpl30e PE=3 SV=1
Length = 99
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 60/95 (63%)
Query: 14 INNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHH 73
++ + + + +G TLG + ++SL+ KG+L++++ N P ++EYY L+ + +
Sbjct: 4 VDRSIRVAVDTGDVTLGSEKSIQSLKLGKGQLVIVAANTPKDIVEDVEYYTNLSDIPSYT 63
Query: 74 YNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSL 108
Y G++V+LG+ CGK F V+ L + DPGDS I+ L
Sbjct: 64 YEGSSVELGSVCGKPFTVATLIVNDPGDSTILDDL 98
>sp|Q9YAU3|RL30E_AERPE 50S ribosomal protein L30e OS=Aeropyrum pernix (strain ATCC 700893
/ DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rpl30e
PE=3 SV=2
Length = 100
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 59/95 (62%)
Query: 13 SINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVH 72
S+ L ++K+G Y +G+K L+++++ + K I+++ N PP + ++EYYA LA + +
Sbjct: 2 SVEKALKDLVKTGVYAMGFKQSLKAVKAGEAKAIVIAENTPPELRRKLEYYAKLAGIPII 61
Query: 73 HYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKS 107
Y G +D+G G+ VS L++ID G S I++
Sbjct: 62 VYRGTRMDMGLVMGRRHGVSVLAVIDEGSSRILEQ 96
>sp|C6A1G2|RL30E_THESM 50S ribosomal protein L30e OS=Thermococcus sibiricus (strain MM 739
/ DSM 12597) GN=rpl30e PE=3 SV=1
Length = 100
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 22 MKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDL 81
+++GK +G +R R+ + KLI+++ N P K +I YYA L+ + V+ + G +V+L
Sbjct: 11 IETGKVVIGSNETMRLARTGEAKLIIMAKNAPKEVKDDINYYAGLSSIPVYEFEGTSVEL 70
Query: 82 GTACGKYFRVSCLSIIDPGDSDIIKSLPG 110
GT GK F ++ ++I++PG+S I+ SL G
Sbjct: 71 GTLLGKPFVIALMAIVEPGESKIL-SLAG 98
>sp|Q980R3|RL30E_SULSO 50S ribosomal protein L30e OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rpl30e PE=3 SV=1
Length = 108
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 6 KTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAM 65
K + S L ++K+GK G K ++ ++ SK K++++++ K +I +YA
Sbjct: 3 KVSEQQVSFEGELKSLLKTGKVIFGAKRAIKYIKLSKVKMVIVASTLRGDLKQDIMHYAK 62
Query: 66 LAKVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDS---DIIKS 107
L+ + V+ Y G+ DLGT CGK F +S +SIID GDS DIIK
Sbjct: 63 LSNIPVYEYKGSGWDLGTLCGKPFMISTISIIDEGDSKILDIIKE 107
>sp|B1YC27|RL30E_PYRNV 50S ribosomal protein L30e OS=Pyrobaculum neutrophilum (strain DSM
2338 / JCM 9278 / V24Sta) GN=rpl30e PE=3 SV=1
Length = 101
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Query: 14 INNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHH 73
I+ L + + +GK +G++ +++ + KL++L+ N P + +IEYYA LA V V
Sbjct: 4 ISRELQVALNTGKVIIGFEETKKAVLAGTPKLVILAANAPKWARGDIEYYAKLAGVPVFI 63
Query: 74 YNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPGEH 112
+ G++++LG A + ++ L+++DPG S+I+K + EH
Sbjct: 64 FPGSSIELGAAAKRPHKIMALAVLDPGQSEILKVV--EH 100
>sp|Q9V112|RL30E_PYRAB 50S ribosomal protein L30e OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rpl30e PE=3 SV=1
Length = 99
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 54/84 (64%)
Query: 22 MKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDL 81
+++GK LG +R ++ KLI+++ N P K +I YYA L+ + V+ + G +V+L
Sbjct: 11 LETGKVILGSNETIRLAKTGGAKLIIVAKNAPKEIKDDIYYYAKLSDIPVYEFEGTSVEL 70
Query: 82 GTACGKYFRVSCLSIIDPGDSDII 105
GT GK F V+ L+I+DPG+S I+
Sbjct: 71 GTLLGKPFVVASLAIVDPGESRIL 94
>sp|O74018|RL30E_PYRHO 50S ribosomal protein L30e OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rpl30e PE=3 SV=1
Length = 99
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 54/84 (64%)
Query: 22 MKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDL 81
+++GK LG +R ++ KLI+++ N P K +I YYA L+ + V+ + G +V+L
Sbjct: 11 LETGKVILGSNETIRLAKTGGAKLIIVARNAPKEIKDDIYYYAKLSDIPVYEFEGTSVEL 70
Query: 82 GTACGKYFRVSCLSIIDPGDSDII 105
GT GK F V+ L+I+DPG+S I+
Sbjct: 71 GTLLGKPFVVASLAIVDPGESRIL 94
>sp|A3MXZ2|RL30E_PYRCJ 50S ribosomal protein L30e OS=Pyrobaculum calidifontis (strain JCM
11548 / VA1) GN=rpl30e PE=3 SV=1
Length = 101
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 57/93 (61%)
Query: 14 INNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHH 73
I L + + +GK +G + +SL + KL++++ N P + +IEYYA LA V +
Sbjct: 4 IGRELQVAINTGKVIIGLRETKKSLLTGAPKLVIIAANAPRWAREDIEYYAKLAGVPIFT 63
Query: 74 YNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIK 106
+ G++++LG A + ++ L+++DPG S+I+K
Sbjct: 64 FPGSSIELGAAAKRPHKIMALAVVDPGQSEILK 96
>sp|Q8ZYQ6|RL30E_PYRAE 50S ribosomal protein L30e OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=rpl30e PE=3 SV=1
Length = 102
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 58/93 (62%)
Query: 14 INNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHH 73
I+ L + + +GK +G++ ++L + KLI+L+ N P + +IEYYA LA V +
Sbjct: 4 ISRELQVAINTGKVVIGFEETKKALLTGAPKLIILAANAPKWARDDIEYYAKLAGVPIFV 63
Query: 74 YNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIK 106
+ G++++LG A + ++ L++ID G S+I+K
Sbjct: 64 FPGSSIELGAAAKRPHKIMALAVIDAGQSEILK 96
>sp|Q2NEK6|RL30E_METST 50S ribosomal protein L30e OS=Methanosphaera stadtmanae (strain DSM
3091) GN=rpl30e PE=3 SV=1
Length = 98
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 61/93 (65%)
Query: 14 INNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHH 73
I + + + +GK LG +++++ G+L +++ N P K++IE Y+ L+++ V+
Sbjct: 3 IERGIRVAVDTGKVILGSNKAIQAIKLGNGELAIMAENTPKNVKADIEAYSKLSEMPVYT 62
Query: 74 YNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIK 106
+ G++V+LG+ CGK F VS L I +PGDS+I++
Sbjct: 63 FEGSSVELGSICGKPFTVSVLIIQEPGDSNILE 95
>sp|A8MB78|RL30E_CALMQ 50S ribosomal protein L30e OS=Caldivirga maquilingensis (strain
ATCC 700844 / DSMZ 13496 / JCM 10307 / IC-167) GN=rpl30e
PE=3 SV=1
Length = 103
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Query: 14 INNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHH 73
I+ L +V +G+ T+G + ++++ + KL++++ N PP + ++E YA L++V V
Sbjct: 4 ISRELQVVANTGRLTMGVRQSIKAILNGDAKLVIMAANVPPSIRQDVERYAKLSQVPVFT 63
Query: 74 YNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSLPG 110
Y G + +LG A + +++ ++IIDPG+S I+ SL G
Sbjct: 64 YAGTSWELGGALRRSHKIAVVAIIDPGESSIM-SLAG 99
>sp|A6VGV1|RL30E_METM7 50S ribosomal protein L30e OS=Methanococcus maripaludis (strain C7
/ ATCC BAA-1331) GN=rpl30e PE=3 SV=1
Length = 106
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 61/98 (62%)
Query: 8 KKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLA 67
+++ IN + + + +G LG K +++++ +G+L+++++NC + +I YY L+
Sbjct: 3 RRSSMDINRAIRVAVDTGNVVLGTKQAIKNIKHGEGQLVIIADNCAKDVREDIFYYTQLS 62
Query: 68 KVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDII 105
+ V+ + +++LG CGK F VS L +++PG+S I+
Sbjct: 63 ETPVYTHQATSIELGAICGKPFPVSALLVLEPGNSAIL 100
>sp|A4FWF4|RL30E_METM5 50S ribosomal protein L30e OS=Methanococcus maripaludis (strain C5
/ ATCC BAA-1333) GN=rpl30e PE=3 SV=1
Length = 106
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 61/98 (62%)
Query: 8 KKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLA 67
+++ IN + + + +G LG K +++++ +G+L+++++NC K +I YY L+
Sbjct: 3 RRSSMDINRAIRVAVDTGNVVLGTKQAIKNIKHGEGQLVIVADNCAKDVKEDIFYYTKLS 62
Query: 68 KVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDII 105
+ V+ + +++LG CGK F VS L +++PG+S I+
Sbjct: 63 ETPVYTHQATSIELGAICGKPFPVSALLVLEPGNSAIL 100
>sp|A9A9U8|RL30E_METM6 50S ribosomal protein L30e OS=Methanococcus maripaludis (strain C6
/ ATCC BAA-1332) GN=rpl30e PE=3 SV=1
Length = 106
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 61/98 (62%)
Query: 8 KKTHESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLA 67
+++ IN + + + +G LG K +++++ +G+L+++++NC + +I YY L+
Sbjct: 3 RRSSMDINRAIRVAVDTGNVVLGTKQAIKNIKHGEGQLVIIADNCAKDVREDIFYYTQLS 62
Query: 68 KVGVHHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDII 105
+ V+ + +++LG CGK F VS L +++PG+S I+
Sbjct: 63 ETPVYTHQSTSIELGAICGKPFPVSALLVLEPGNSAIL 100
>sp|Q6LXI6|RL30E_METMP 50S ribosomal protein L30e OS=Methanococcus maripaludis (strain S2
/ LL) GN=rpl30e PE=3 SV=1
Length = 100
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 58/93 (62%)
Query: 13 SINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVH 72
IN + + + +G LG K +++++ +G+L+++++NC + +I YY L++ V+
Sbjct: 2 DINRAIRVAVDTGNVVLGTKQAIKNIKHGEGQLVIVADNCAKDVREDIFYYTQLSETPVY 61
Query: 73 HYNGNNVDLGTACGKYFRVSCLSIIDPGDSDII 105
+ +++LG CGK F VS L +++PG+S I+
Sbjct: 62 THQATSIELGAICGKPFPVSALLVLEPGNSAIL 94
>sp|Q8TXJ0|RL30E_METKA 50S ribosomal protein L30e OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rpl30e PE=3 SV=1
Length = 109
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 61/97 (62%)
Query: 12 ESINNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGV 71
+ I ++ + +++G LG ++ L+ K KL++++ NCP + +IEYYA LA V V
Sbjct: 2 QEIERQIRMAVETGDVVLGSNQTIKLLKLGKPKLVIVAANCPAEIREDIEYYAELADVPV 61
Query: 72 HHYNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSL 108
Y G ++DLG CG+ V+ ++++D G+SD+I ++
Sbjct: 62 FVYPGTSMDLGDVCGRPHVVASMAVLDDGESDLIATV 98
>sp|P58376|RL30E_SULTO 50S ribosomal protein L30e OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=rpl30e PE=3 SV=1
Length = 106
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 59/95 (62%)
Query: 14 INNRLALVMKSGKYTLGYKTVLRSLRSSKGKLILLSNNCPPLRKSEIEYYAMLAKVGVHH 73
+ L ++++GK G K ++ +++ K K++++++ K +I YA ++ + V+
Sbjct: 7 FESELKTLLRTGKVVFGSKKTIKMVKTGKVKMVIIASTLRQDLKDDILAYAKISNIPVYQ 66
Query: 74 YNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKSL 108
YNG+ +LGT CGK F +S + +IDPG+S +++ +
Sbjct: 67 YNGSAYELGTLCGKPFMISTIGVIDPGESRLLEEI 101
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,517,775
Number of Sequences: 539616
Number of extensions: 1346272
Number of successful extensions: 3110
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 3034
Number of HSP's gapped (non-prelim): 81
length of query: 112
length of database: 191,569,459
effective HSP length: 80
effective length of query: 32
effective length of database: 148,400,179
effective search space: 4748805728
effective search space used: 4748805728
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)