Query 033723
Match_columns 112
No_of_seqs 160 out of 1010
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 08:55:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033723.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033723hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l53_A Putative fumarylacetoac 100.0 1.2E-37 4E-42 232.9 8.3 110 1-110 1-110 (224)
2 4dbf_A 2-hydroxyhepta-2,4-dien 100.0 2.8E-36 9.6E-41 232.8 8.6 95 15-109 80-176 (288)
3 3rr6_A Putative uncharacterize 100.0 4.3E-36 1.5E-40 229.5 7.9 95 15-109 64-158 (265)
4 3s52_A Putative fumarylacetoac 100.0 7.7E-36 2.6E-40 222.5 8.5 101 10-110 14-114 (221)
5 3r6o_A 2-hydroxyhepta-2,4-dien 100.0 8.3E-35 2.8E-39 228.0 7.4 101 8-109 96-198 (329)
6 3lzk_A Fumarylacetoacetate hyd 100.0 2.4E-33 8.3E-38 221.9 10.0 100 10-110 94-201 (359)
7 1wzo_A HPCE; structural genomi 100.0 6.7E-33 2.3E-37 209.0 7.8 97 14-110 42-138 (246)
8 1saw_A Hypothetical protein FL 100.0 4.7E-33 1.6E-37 207.6 6.5 102 9-110 12-113 (225)
9 2dfu_A Probable 2-hydroxyhepta 100.0 1.3E-32 4.5E-37 209.8 8.5 96 14-109 46-154 (264)
10 1nkq_A Hypothetical 28.8 kDa p 100.0 2.8E-32 9.7E-37 207.6 6.9 98 11-109 5-130 (259)
11 1gtt_A 4-hydroxyphenylacetate 100.0 7.5E-31 2.6E-35 211.1 9.0 93 15-108 2-102 (429)
12 1gtt_A 4-hydroxyphenylacetate 100.0 6.7E-30 2.3E-34 205.6 5.7 93 16-108 223-316 (429)
13 2q18_X 2-keto-3-deoxy-D-arabin 99.9 1.8E-26 6.2E-31 177.8 6.2 85 15-109 73-173 (293)
14 1hyo_A Fumarylacetoacetate hyd 99.9 7.3E-24 2.5E-28 170.5 8.8 87 23-109 130-244 (421)
15 2wqt_A 2-keto-4-pentenoate hyd 99.8 2E-21 6.9E-26 148.0 6.8 95 10-108 49-150 (270)
16 2eb4_A 2-OXO-HEPT-3-ENE-1,7-di 99.8 1.1E-21 3.8E-26 149.1 3.1 93 10-106 49-145 (267)
17 3sri_B Rhoptry NECK protein 2; 21.2 18 0.0006 18.0 -0.2 20 1-21 5-24 (29)
No 1
>3l53_A Putative fumarylacetoacetate isomerase/hydrolase; structural genomics, PSI-2, protein structure initiative; HET: TAR; 2.10A {Oleispira antarctica} PDB: 3v77_A*
Probab=100.00 E-value=1.2e-37 Score=232.93 Aligned_cols=110 Identities=38% Similarity=0.620 Sum_probs=99.4
Q ss_pred CcchhhHHhhhccCCCcEEEEccCcHHHHHHhCCCCCCCCEEEecCCCCcccCCCcEeeCCCCCCceeceeEEEEECCCC
Q 033723 1 MATASSAVQKLIQAGTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKA 80 (112)
Q Consensus 1 ~~~~~~~~~~~l~~~~ki~~vg~NY~~h~~e~~~~~p~~P~~f~K~~~a~~g~~~~i~~P~~~~~ld~E~ELavVIGk~~ 80 (112)
||++--...++-.+++||+|+|+||++|++|+|.+.|+.|++|+|+++++++++++|.+|..+.++|||+|||+||||++
T Consensus 1 ~~~~~~~~~P~p~~~~ki~cvG~Ny~~h~~e~g~~~p~~P~~F~K~~~s~~~~g~~I~~P~~~~~~d~E~ELavvIgk~~ 80 (224)
T 3l53_A 1 MAELILNQRPYPRDLGKIVCVGRNYAAHAKELNNPIPSSPILFIKPASSAVPFGPVFSIPKDQGSVHHELEIAILIGKAL 80 (224)
T ss_dssp CCCCEETTEECSSCCCEEEEEECCSHHHHHHTTCCCCSSCEEEEEEGGGEEESCSEECCCSSSSCEEECEEEEEEECSCB
T ss_pred CcccceecCCCCCCCCeEEEEccCHHHHHHHhCCCCCCCCEEEecCCceEECCCCeEecCCCCCCcceEEEEEEEECCCC
Confidence 44443333444345799999999999999999999999999999999999999999999998889999999999999999
Q ss_pred CCCChhcHhhhhceEEEEeecchHhHHhhh
Q 033723 81 RDVPETTAMDYVGGYAVALDMTAREIQSSA 110 (112)
Q Consensus 81 ~~v~~~~A~~~I~Gyti~nD~TaRd~q~~~ 110 (112)
+++++++|++||+|||++||+|+||+|.++
T Consensus 81 ~~i~~~~A~~~I~Gy~~~nDvs~Rd~q~~~ 110 (224)
T 3l53_A 81 SRASTEQVAESIAGIGLGLDLTLRDVQDQL 110 (224)
T ss_dssp SSCCHHHHHHHEEEEEEEECCEEHHHHHHH
T ss_pred CCCCHHHHHhhccEEEEEEEeEhHHhhhhh
Confidence 999999999999999999999999999764
No 2
>4dbf_A 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; oxaloacetate decarboxylase; 1.90A {Corynebacterium glutamicum} PDB: 4dbh_A
Probab=100.00 E-value=2.8e-36 Score=232.84 Aligned_cols=95 Identities=36% Similarity=0.556 Sum_probs=84.1
Q ss_pred CCcEEEEccCcHHHHHHhC--CCCCCCCEEEecCCCCcccCCCcEeeCCCCCCceeceeEEEEECCCCCCCChhcHhhhh
Q 033723 15 GTKIVAVGRNYAAHAKELG--NAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYV 92 (112)
Q Consensus 15 ~~ki~~vg~NY~~h~~e~~--~~~p~~P~~f~K~~~a~~g~~~~i~~P~~~~~ld~E~ELavVIGk~~~~v~~~~A~~~I 92 (112)
|+||||+|+||++|++|++ .+.|+.|++|+|+++++++++++|.+|..+.++|||+|||+||||.+++|++++|++||
T Consensus 80 p~ki~cvG~NY~~H~~E~~~~~~~p~~P~~F~K~~~sv~g~~~~I~~P~~~~~~d~E~ELavVIGk~~~~v~~~~A~~~I 159 (288)
T 4dbf_A 80 PSKVVAIGRNYADHVAEVFKKSAESLPPTLFLKPPTAVTGPESPIRIPSFATKVEFEGELAVVIGKPCKNVKADDWKSVV 159 (288)
T ss_dssp CSCEEEEESCBCC-----------CCCCEEEEECGGGEECTTCCEEECTTCCSEECCEEEEEEECSCBSSCCGGGGGGGE
T ss_pred CceEEEEeccHHHHHHHhccCCCCCCCCEEEEeCcceeeCCCCceECCCCCCceeEEEEEEEEECCCcCCCCHHHHhhhe
Confidence 5999999999999999999 78899999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEeecchHhHHhh
Q 033723 93 GGYAVALDMTAREIQSS 109 (112)
Q Consensus 93 ~Gyti~nD~TaRd~q~~ 109 (112)
+|||++||+|+||+|.+
T Consensus 160 ~Gytv~nDvsaRd~Q~~ 176 (288)
T 4dbf_A 160 LGFTIINDVSSRDLQFA 176 (288)
T ss_dssp EEEEEEECCEEHHHHHH
T ss_pred eEEEEEEEeEhHHhhhc
Confidence 99999999999999975
No 3
>3rr6_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.58A {Mycobacterium abscessus} PDB: 3qdf_A
Probab=100.00 E-value=4.3e-36 Score=229.52 Aligned_cols=95 Identities=44% Similarity=0.805 Sum_probs=92.6
Q ss_pred CCcEEEEccCcHHHHHHhCCCCCCCCEEEecCCCCcccCCCcEeeCCCCCCceeceeEEEEECCCCCCCChhcHhhhhce
Q 033723 15 GTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGG 94 (112)
Q Consensus 15 ~~ki~~vg~NY~~h~~e~~~~~p~~P~~f~K~~~a~~g~~~~i~~P~~~~~ld~E~ELavVIGk~~~~v~~~~A~~~I~G 94 (112)
|+||+|+|+||++|++|++.+.|+.|++|+|+++++++++++|.+|..+.++|||+|||+||||.+++|++++|++||+|
T Consensus 64 p~ki~cvG~NY~~h~~e~g~~~P~~P~~F~K~~~s~~g~~~~I~~P~~~~~~d~E~ELavVIGk~~~~v~~~~A~~~V~G 143 (265)
T 3rr6_A 64 ASKVVAMGKNYAAHAAEMGGDPPESPVIFIKPNTSIIGPGLPIQLPPSATEVHHEGELAIVIGRPCKDVPAARAAENILG 143 (265)
T ss_dssp CSCEEEESCCBCSSGGGTTSSCCCCCCEEEECGGGEECTTSCEECCTTCSCEEECEEEEEEECSCBSSCCGGGTGGGEEE
T ss_pred CceEEEEEcCHHHHHHHhCCCCCCCCEEEEeCcceEeCCCCceECCCCCCceeEEEEEEEEECCcCCCCCHHHHHhheeE
Confidence 59999999999999999999999999999999999999999999999989999999999999999999999999999999
Q ss_pred EEEEeecchHhHHhh
Q 033723 95 YAVALDMTAREIQSS 109 (112)
Q Consensus 95 yti~nD~TaRd~q~~ 109 (112)
||++||+|+||+|.+
T Consensus 144 yt~~nDvsaRd~q~~ 158 (265)
T 3rr6_A 144 YTIGNDVSARDHQRA 158 (265)
T ss_dssp EEEEECCEEHHHHHH
T ss_pred EEEEEEeEhHHhhhc
Confidence 999999999999974
No 4
>3s52_A Putative fumarylacetoacetate hydrolase family Pro; csgid, structural genomics, center for structural genomics O infectious diseases; 2.01A {Yersinia pestis} SCOP: d.177.1.1 PDB: 1nr9_A
Probab=100.00 E-value=7.7e-36 Score=222.52 Aligned_cols=101 Identities=41% Similarity=0.665 Sum_probs=96.0
Q ss_pred hhccCCCcEEEEccCcHHHHHHhCCCCCCCCEEEecCCCCcccCCCcEeeCCCCCCceeceeEEEEECCCCCCCChhcHh
Q 033723 10 KLIQAGTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAM 89 (112)
Q Consensus 10 ~~l~~~~ki~~vg~NY~~h~~e~~~~~p~~P~~f~K~~~a~~g~~~~i~~P~~~~~ld~E~ELavVIGk~~~~v~~~~A~ 89 (112)
+...+++||||+|+||++|++|++.+.|+.|++|+|+++++++++++|.+|..+.++|||+|||+||||+++++++++|+
T Consensus 14 ~~~~p~~ki~~vG~Ny~~h~~e~g~~~p~~P~~F~K~~~~~~~~g~~i~~p~~~~~~d~E~ELavvig~~~~~v~~~~A~ 93 (221)
T 3s52_A 14 LLDFPVNKVVCVGSNYAEHIKEMGSTASVEPVLFIKPETALCDIRQPVSIPKDFGSVHHEIELAVLIGTPLKQASEDRVA 93 (221)
T ss_dssp BCCSCCCEEEEEESCBHHHHHHTTCCCCSSCEEEEEEGGGEEETTSCBCCCSSSSCEEECEEEEEEECSCBSSCCHHHHH
T ss_pred cccCCCCcEEEEeCCHHHHHHHhCCCCCCceEEEEcCCceEeCCCCeEECCCCCCCccEEEEEEEEECCCCCCCCHHHHH
Confidence 44456799999999999999999999999999999999999999999999999889999999999999999999999999
Q ss_pred hhhceEEEEeecchHhHHhhh
Q 033723 90 DYVGGYAVALDMTAREIQSSA 110 (112)
Q Consensus 90 ~~I~Gyti~nD~TaRd~q~~~ 110 (112)
+||+|||++||+|+||+|.++
T Consensus 94 ~~I~Gy~~~nDvs~Rd~q~~~ 114 (221)
T 3s52_A 94 RAIAGYGVALDLTLRELQAGF 114 (221)
T ss_dssp HHEEEEEEEECCEEHHHHHHH
T ss_pred hhheEEEEEEEeEHHHHhhhh
Confidence 999999999999999999864
No 5
>3r6o_A 2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase; ssgcid, struc genomics, seattle structural genomics center for infectious isomerase; 1.95A {Mycobacterium abscessus}
Probab=100.00 E-value=8.3e-35 Score=228.05 Aligned_cols=101 Identities=32% Similarity=0.569 Sum_probs=87.3
Q ss_pred HhhhccCCCcEEEEccCcHHHHHHhCCCCCC--CCEEEecCCCCcccCCCcEeeCCCCCCceeceeEEEEECCCCCCCCh
Q 033723 8 VQKLIQAGTKIVAVGRNYAAHAKELGNAVPK--EPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPE 85 (112)
Q Consensus 8 ~~~~l~~~~ki~~vg~NY~~h~~e~~~~~p~--~P~~f~K~~~a~~g~~~~i~~P~~~~~ld~E~ELavVIGk~~~~v~~ 85 (112)
+.+++++|+||||+|+||++|++ ++.+.|+ .|++|+|+++++++++++|.+|..+..+|||+||||||||.+++|++
T Consensus 96 llaPv~~p~kI~cvG~NY~~H~~-~g~~~P~~~~P~~F~K~~~s~~g~~~~I~~P~~~~~~d~E~ELavVIGk~~~~v~~ 174 (329)
T 3r6o_A 96 LGAPIPEPGQVIALGFNYPTHSD-TDSPLPKMADPVVFMKSPTSISGPRDAVIAPRTSHALDYEIEIAVVIGKPGYRIER 174 (329)
T ss_dssp BCCSSSSCSCEEEEESCSTTC------------CCEEEEECGGGEECTTCCEEECTTCSCEECCEEEEEEECSCBSSCCG
T ss_pred EcCCCCCCCeEEEEcccHHHHHH-hCCCCCCccCCEEEEcccceEECCCCceECCCCCCCccEEEEEEEEECCCCCCCCH
Confidence 34566778999999999999999 8888888 99999999999999999999999999999999999999999999999
Q ss_pred hcHhhhhceEEEEeecchHhHHhh
Q 033723 86 TTAMDYVGGYAVALDMTAREIQSS 109 (112)
Q Consensus 86 ~~A~~~I~Gyti~nD~TaRd~q~~ 109 (112)
++|++||+|||++||+|+||+|++
T Consensus 175 e~A~~~I~Gytv~NDvSaRd~q~~ 198 (329)
T 3r6o_A 175 SQAIKHVAGYMLANDITARDVALP 198 (329)
T ss_dssp GGGGGGEEEEEEEECCEEHHHHCT
T ss_pred HHHHhhheEEEEEEEeEHHHHhhh
Confidence 999999999999999999999874
No 6
>3lzk_A Fumarylacetoacetate hydrolase family protein; structural genomics, PSI-2, protein structure initiative; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.4e-33 Score=221.89 Aligned_cols=100 Identities=17% Similarity=0.232 Sum_probs=91.1
Q ss_pred hhccCCCcEEEEccCcHHHHHHh----CCCCCC----CCEEEecCCCCcccCCCcEeeCCCCCCceeceeEEEEECCCCC
Q 033723 10 KLIQAGTKIVAVGRNYAAHAKEL----GNAVPK----EPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKAR 81 (112)
Q Consensus 10 ~~l~~~~ki~~vg~NY~~h~~e~----~~~~p~----~P~~f~K~~~a~~g~~~~i~~P~~~~~ld~E~ELavVIGk~~~ 81 (112)
.+++++ ++||+|.||++|++|+ +.+.|+ .|++|+|+++++++++++|.+|..+..+|||+||||||||.++
T Consensus 94 ~Pv~~~-~~~~~g~NY~~Ha~e~~~~~g~~~p~~~~~~P~~F~k~~ssv~g~~~~I~~P~~s~~lD~E~ELavVIGk~~~ 172 (359)
T 3lzk_A 94 SPLPRA-FQWADGSAYVNHVELVRKARNAEMPASFWTDPLIYQGGSDSFLGPRDPILMADDAWGIDMEGEAAVIVDDVPM 172 (359)
T ss_dssp CSSSSC-SCEEEECCCHHHHHHHHHHTTCCCCGGGGTSCCEEEECCSSCBCTTSCEEESCTTSCEECCEEEEEEECCBCT
T ss_pred CCCCCC-CEEEEEcCHHHHHHHHHHhcCCCCCCcccCccEEEECCCceEECCCCCEECCCCCCCeeEEEEEEEEECCCCC
Confidence 334444 4699999999999996 566777 8999999999999999999999999999999999999999999
Q ss_pred CCChhcHhhhhceEEEEeecchHhHHhhh
Q 033723 82 DVPETTAMDYVGGYAVALDMTAREIQSSA 110 (112)
Q Consensus 82 ~v~~~~A~~~I~Gyti~nD~TaRd~q~~~ 110 (112)
+|++++|++||+|||++||||+||+|...
T Consensus 173 ~v~~e~A~~~I~Gytl~ND~SaRD~Q~~~ 201 (359)
T 3lzk_A 173 GATLDEAKAAIRLVMLVNDVSLRGLIPGE 201 (359)
T ss_dssp TCCHHHHHHTEEEEEEEECCEETTTHHHH
T ss_pred CCCHHHHHhhhcEEEEEEeccHHHhhhhh
Confidence 99999999999999999999999999753
No 7
>1wzo_A HPCE; structural genomics, riken structural genomics/proteom initiative, RSGI, NPPSFA, isomerase; 1.90A {Thermus thermophilus}
Probab=99.98 E-value=6.7e-33 Score=208.99 Aligned_cols=97 Identities=43% Similarity=0.671 Sum_probs=85.8
Q ss_pred CCCcEEEEccCcHHHHHHhCCCCCCCCEEEecCCCCcccCCCcEeeCCCCCCceeceeEEEEECCCCCCCChhcHhhhhc
Q 033723 14 AGTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVG 93 (112)
Q Consensus 14 ~~~ki~~vg~NY~~h~~e~~~~~p~~P~~f~K~~~a~~g~~~~i~~P~~~~~ld~E~ELavVIGk~~~~v~~~~A~~~I~ 93 (112)
+|+||+|+|+||++|++|++.+.|+.|++|+|+++++++++++|.+|..+..+|||+||++||||.++++++++|++||+
T Consensus 42 ~p~~i~~vG~ny~~h~~e~g~~~P~~P~~f~k~~~~~~~~g~~i~~p~~~~~~~~E~ELavvig~~~~~v~~~~a~~~i~ 121 (246)
T 1wzo_A 42 TPGKILGVALNYADHAEELGLSRPEEPALFWKPNTSLLPHKGVVLYPKGARFVHYEVELAVVVGRPMKRVRAKDALDYVL 121 (246)
T ss_dssp CCCCEEEEESCBC------CCCCCSSCEEEEECGGGEECTTCCEEECTTCSCEECCEEEEEEECSCBSSCCHHHHGGGEE
T ss_pred CCCeEEEEEcChHHHHHHhCCCCCCCCEEEEECcccEeCCCCeEECCCCCCceeEEEEEEEEECCCCCCCCHHHHHhhee
Confidence 57999999999999999999999999999999999999999999999988899999999999999999999999999999
Q ss_pred eEEEEeecchHhHHhhh
Q 033723 94 GYAVALDMTAREIQSSA 110 (112)
Q Consensus 94 Gyti~nD~TaRd~q~~~ 110 (112)
||+++||+|+||+|.+.
T Consensus 122 g~~~~nD~s~rd~q~~~ 138 (246)
T 1wzo_A 122 GYTIANDLVARDYVTNT 138 (246)
T ss_dssp EEEEEECCEEGGGC---
T ss_pred EEEEEEECchHHhcccc
Confidence 99999999999999764
No 8
>1saw_A Hypothetical protein FLJ36880; structural genomics, fumarylacetoacetatehydrolase family, unknown function; 2.20A {Homo sapiens} SCOP: d.177.1.1
Probab=99.97 E-value=4.7e-33 Score=207.62 Aligned_cols=102 Identities=53% Similarity=0.908 Sum_probs=86.4
Q ss_pred hhhccCCCcEEEEccCcHHHHHHhCCCCCCCCEEEecCCCCcccCCCcEeeCCCCCCceeceeEEEEECCCCCCCChhcH
Q 033723 9 QKLIQAGTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTA 88 (112)
Q Consensus 9 ~~~l~~~~ki~~vg~NY~~h~~e~~~~~p~~P~~f~K~~~a~~g~~~~i~~P~~~~~ld~E~ELavVIGk~~~~v~~~~A 88 (112)
...+++++||+|+|+||++|++|+|.+.|+.|++|.|+++++++++++|.+|..+..+|||+||++||||.++++++++|
T Consensus 12 ~~~~~~~~ki~~vG~ny~~h~~e~g~~~P~~P~~f~k~~~~~~~~g~~i~~p~~~~~~~~E~ELavvig~~~~~v~~~~a 91 (225)
T 1saw_A 12 SRFWEWGKNIVCVGRNYADHVREMRSAVLSEPVLFLKPSTAYAPEGSPILMPAYTRNLHHELELGVVMGKRCRAVPEAAA 91 (225)
T ss_dssp GGHHHHCCEEEEESCCBC-----------CCCCEEEEEGGGEEETTSCEECCTTCSCEEECEEEEEEESSCBCSCCTTTG
T ss_pred hhcccCCCeEEEEEeCcHHHHHHhCCCCCCCCEEEECCcceeeCCCCeEECCCCCCCccEEEEEEEEECCCCCCCCHHHH
Confidence 55667899999999999999999999889999999999999999999999999888899999999999999999999999
Q ss_pred hhhhceEEEEeecchHhHHhhh
Q 033723 89 MDYVGGYAVALDMTAREIQSSA 110 (112)
Q Consensus 89 ~~~I~Gyti~nD~TaRd~q~~~ 110 (112)
++||+||+++||+|+||+|...
T Consensus 92 ~~~i~g~~~~nDvt~r~~q~~~ 113 (225)
T 1saw_A 92 MDYVGGYALCLDMTARDVQDEC 113 (225)
T ss_dssp GGSEEEEEEEECCEEHHHHHHH
T ss_pred HHhheEEEecccccHHHHhhhh
Confidence 9999999999999999999763
No 9
>2dfu_A Probable 2-hydroxyhepta-2,4-diene-1,7-dioate ISOM; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, structural GE NPPSFA; 2.20A {Thermus thermophilus}
Probab=99.97 E-value=1.3e-32 Score=209.81 Aligned_cols=96 Identities=48% Similarity=0.752 Sum_probs=83.8
Q ss_pred CCCcEEEEccCcHHHHHHhC----CCCCCCCEEEecCCCCcccCC---------CcEeeCCCCCCceeceeEEEEECCCC
Q 033723 14 AGTKIVAVGRNYAAHAKELG----NAVPKEPVLFLKPTSSYLGNG---------GTIEVPHPLDSLHHEVELAVVIGQKA 80 (112)
Q Consensus 14 ~~~ki~~vg~NY~~h~~e~~----~~~p~~P~~f~K~~~a~~g~~---------~~i~~P~~~~~ld~E~ELavVIGk~~ 80 (112)
+|+||+|+|+||++|++|++ .+.|+.|++|.|+++++++++ ++|.+|..+.++|||+||++||||.+
T Consensus 46 ~p~~i~~~g~Ny~~H~~e~~~~~~~~~p~~P~~f~k~~~s~~~~~~~~rp~g~~~~i~~p~~~~~~d~E~ELavvig~~~ 125 (264)
T 2dfu_A 46 TPTKIVCVGRNYREHIREMGHDFGEDLPKEPGLFLKGPNALARPGNPRDPWGTAEPVPYPFFTEELHYEGELAVVVGDRM 125 (264)
T ss_dssp CCSCEEEECSCBC-------------CCSSCCEEEECGGGEECCCBTTBHHHHSCCEEECSSCSCEECCEEEEEEECSCB
T ss_pred cCCeEEEEeCcHHHHHHHhcccccCCCCCCCEEEEeccceEEccCCcccccCCCcceecCCCCCceeEEEEEEEEECCCC
Confidence 47999999999999999998 678899999999999999999 99999998888999999999999999
Q ss_pred CCCChhcHhhhhceEEEEeecchHhHHhh
Q 033723 81 RDVPETTAMDYVGGYAVALDMTAREIQSS 109 (112)
Q Consensus 81 ~~v~~~~A~~~I~Gyti~nD~TaRd~q~~ 109 (112)
+++++++|++||+||+++||+|+||+|.+
T Consensus 126 ~~v~~~~a~~~I~gy~~~nDvt~Rd~q~~ 154 (264)
T 2dfu_A 126 RHVPPEKALDHVLGYTVAVDITARDVQKK 154 (264)
T ss_dssp SSCCHHHHGGGEEEEEEEECCEEHHHHHH
T ss_pred CCCCHHHHHHHhhEeEEEEEeEhhhhhhc
Confidence 99999999999999999999999999975
No 10
>1nkq_A Hypothetical 28.8 kDa protein in PSD1-SKO1 intergenic region; dimer, PSI, protein structure initiative; 2.20A {Saccharomyces cerevisiae} SCOP: d.177.1.1
Probab=99.97 E-value=2.8e-32 Score=207.63 Aligned_cols=98 Identities=45% Similarity=0.788 Sum_probs=89.0
Q ss_pred hccCCCcEEEEccCcHHHHHHhCCCCCCCCEEEecCCCCcccC------------------------C-CcEeeCCCCCC
Q 033723 11 LIQAGTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGN------------------------G-GTIEVPHPLDS 65 (112)
Q Consensus 11 ~l~~~~ki~~vg~NY~~h~~e~~~~~p~~P~~f~K~~~a~~g~------------------------~-~~i~~P~~~~~ 65 (112)
++++|+||+|+|+||++|++|++.+.|+.|++|+|++++++++ + ++|.+|... +
T Consensus 5 ~~~~~~ki~cvG~Ny~~H~~E~g~~~p~~P~~F~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~p~~~-~ 83 (259)
T 1nkq_A 5 YLKAARKIICIGRNYAAHIKELNNSTPKQPFFFLKPTSSIVTPLSSSLVKTTRPANSTFNGLNEDGTNPGPIFIPRGV-K 83 (259)
T ss_dssp GGGGCCCEEEECSCBCSSGGGGGC----CCCEEEECGGGEEBCTTCC------CCSCSCCCCCTTSCCBCCEEECTTC-C
T ss_pred cCCCCCEEEEEecCHHHHHHHhCCCCCCCCEEEeeChhhEecccccccccccccccccccccccccCCCCcEEcCCCC-c
Confidence 5678999999999999999999998999999999999999998 4 999999877 6
Q ss_pred ceeceeEEEEECCCCCCCCh---hcHhhhhceEEEEeecchHhHHhh
Q 033723 66 LHHEVELAVVIGQKARDVPE---TTAMDYVGGYAVALDMTAREIQSS 109 (112)
Q Consensus 66 ld~E~ELavVIGk~~~~v~~---~~A~~~I~Gyti~nD~TaRd~q~~ 109 (112)
+|||+||++||||.++++++ ++|++||+||+++||+|+||+|..
T Consensus 84 ~d~E~ELavvIg~~~~~v~~~t~~ea~~~I~g~~~~nDvt~Rd~q~~ 130 (259)
T 1nkq_A 84 VHHEIELALIVSKHLSNVTKMKPEEVYDSISGVALALDLTARNVQDE 130 (259)
T ss_dssp EEECEEEEEEECSCBCSCCCCCGGGTGGGEEEEEEEECCEEHHHHHH
T ss_pred ccEEEEEEEEECCCCCCCCcCCHHHHHhhhhEEEEEEeeeHHHhhhh
Confidence 99999999999999999988 999999999999999999999974
No 11
>1gtt_A 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; lyase, bifunctional enzyme, multifunctional enzyme decarboxylase; 1.7A {Escherichia coli} SCOP: d.177.1.1 d.177.1.1 PDB: 1i7o_A
Probab=99.97 E-value=7.5e-31 Score=211.06 Aligned_cols=93 Identities=30% Similarity=0.473 Sum_probs=88.5
Q ss_pred CCcEEEEccCcHHHHHHhCC--------CCCCCCEEEecCCCCcccCCCcEeeCCCCCCceeceeEEEEECCCCCCCChh
Q 033723 15 GTKIVAVGRNYAAHAKELGN--------AVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPET 86 (112)
Q Consensus 15 ~~ki~~vg~NY~~h~~e~~~--------~~p~~P~~f~K~~~a~~g~~~~i~~P~~~~~ld~E~ELavVIGk~~~~v~~~ 86 (112)
|+||+|+|+||++|++|++. +.|+.|++|+|+++++++++++|.+|..+. +|||+||++||||.+++++++
T Consensus 2 p~ki~cvg~Ny~~H~~e~~~~~~~~~~~~~p~~P~~f~k~~~~~~~~g~~i~~p~~~~-~~~E~Elavvig~~~~~v~~~ 80 (429)
T 1gtt_A 2 KGTIFAVALNHRSQLDAWQEAFQQSPYKAPPKTAVWFIKPRNTVIGCGEPIPFPQGEK-VLSGATVALIVGKTATKVREE 80 (429)
T ss_dssp CSCEEEEESCBHHHHHHHTTGGGSTTTCSCCSSCEEEEECGGGEECTTCCEEECTTCC-EECCEEEEEEECSCBSSCCGG
T ss_pred CceEEEEechHHHHHHHhhccccccccCCCCCCCEEEEcCcceEEcCCCeeecCCCCC-ccEEEEEEEEECCCCCCCCHH
Confidence 68999999999999999973 568999999999999999999999999887 999999999999999999999
Q ss_pred cHhhhhceEEEEeecchHhHHh
Q 033723 87 TAMDYVGGYAVALDMTAREIQS 108 (112)
Q Consensus 87 ~A~~~I~Gyti~nD~TaRd~q~ 108 (112)
+|++||+|||++||+|+||+|.
T Consensus 81 ~a~~~i~gy~~~nD~s~Rd~~~ 102 (429)
T 1gtt_A 81 DAAEYIAGYALANDVSLPEESF 102 (429)
T ss_dssp GGGGGEEEEEEEECCBSCCCCS
T ss_pred HHHhHhhEEEEEEEeeehhhhc
Confidence 9999999999999999999764
No 12
>1gtt_A 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; lyase, bifunctional enzyme, multifunctional enzyme decarboxylase; 1.7A {Escherichia coli} SCOP: d.177.1.1 d.177.1.1 PDB: 1i7o_A
Probab=99.96 E-value=6.7e-30 Score=205.56 Aligned_cols=93 Identities=43% Similarity=0.711 Sum_probs=82.6
Q ss_pred CcEEEEccCcHHHHHHhCCCCCCCCEEEecCCCCcccCCCcEeeCCCCCCceeceeEEEEECCCCCCCChhcHhhhhceE
Q 033723 16 TKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGY 95 (112)
Q Consensus 16 ~ki~~vg~NY~~h~~e~~~~~p~~P~~f~K~~~a~~g~~~~i~~P~~~~~ld~E~ELavVIGk~~~~v~~~~A~~~I~Gy 95 (112)
+||+|+|+||++|++|++.+.|+.|++|.|+++++++++++|.+|..+.++|||+||++||||.++++++++|++||+||
T Consensus 223 ~~i~~vG~ny~~h~~e~g~~~p~~P~~f~k~~~~~~~~g~~i~~p~~~~~~~~E~Elavvig~~~~~v~~~~a~~~i~g~ 302 (429)
T 1gtt_A 223 GTLFALGLNYADHASELEFKPPEEPLVFLKAPNTLTGDNQTSVRPNNIEYMHYEAELVVVIGKQARNVSEADAMDYVAGY 302 (429)
T ss_dssp SCEEEESSCBCCC--------CCSCCEEEECGGGEECTTEEEEECTTCSCEECCEEEEEEECSCBSSCCTTTGGGGEEEE
T ss_pred CcEEEEEeCHHHHHHHhCCCCCCCCEEEEcCcceEeCCCCeEEcCCCCCCccEEEEEEEEECCCCCCCCHHHHHhhheEE
Confidence 99999999999999999998999999999999999999999999998889999999999999999999999999999999
Q ss_pred EEEeecchHhH-Hh
Q 033723 96 AVALDMTAREI-QS 108 (112)
Q Consensus 96 ti~nD~TaRd~-q~ 108 (112)
+++||+|+||| |.
T Consensus 303 ~~~nD~t~Rd~lq~ 316 (429)
T 1gtt_A 303 TVCNDYAIRDYLEN 316 (429)
T ss_dssp EEEECCEEGGGCCS
T ss_pred EEEEEcccchhhhh
Confidence 99999999995 64
No 13
>2q18_X 2-keto-3-deoxy-D-arabinonate dehydratase; FAH-family fold, lyase; 2.10A {Sulfolobus solfataricus} PDB: 2q19_X 2q1a_X 2q1c_X 2q1d_X 3bqb_A
Probab=99.93 E-value=1.8e-26 Score=177.79 Aligned_cols=85 Identities=25% Similarity=0.409 Sum_probs=72.9
Q ss_pred CCcEEEEccCcHH----HHHHhC-----CC------CCCCCEEEecC-CCCcccCCCcEeeCCCCCCceeceeEEEEECC
Q 033723 15 GTKIVAVGRNYAA----HAKELG-----NA------VPKEPVLFLKP-TSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQ 78 (112)
Q Consensus 15 ~~ki~~vg~NY~~----h~~e~~-----~~------~p~~P~~f~K~-~~a~~g~~~~i~~P~~~~~ld~E~ELavVIGk 78 (112)
|+||+|+|+||++ |++|++ .+ .|+.|.+|+|+ ++++++++++|.+|..+..+|||+|||+||||
T Consensus 73 p~~i~~vG~NY~~~~~~h~~e~~~~~~~~~~~~~~~~~~~P~~F~k~~~~~~~g~~~~i~~p~~~~~~d~E~ELavvIg~ 152 (293)
T 2q18_X 73 PPEVWGSGISYEMARERYSEENVAKILGKTIYEKVYDAVRPEIFFKATPNRCVGHGEAIAVRSDSEWTLPEPELAVVLDS 152 (293)
T ss_dssp CSCEEEEESCBC---------CCCEETTEEHHHHHHHSSSCEEEEEECGGGEECTTSCEEECTTCSCEECCEEEEEEECT
T ss_pred cceEEEEEechhhhhHHHHHHhccccccccccccccCCCCCEEEECCCCCeEecCCCEEEcCCCCCCcceEEEEEEEECC
Confidence 6999999999998 888887 22 37789999996 69999999999999988889999999999999
Q ss_pred CCCCCChhcHhhhhceEEEEeecchHhHHhh
Q 033723 79 KARDVPETTAMDYVGGYAVALDMTAREIQSS 109 (112)
Q Consensus 79 ~~~~v~~~~A~~~I~Gyti~nD~TaRd~q~~ 109 (112)
.++ |+|||++||+|+||+|.+
T Consensus 153 ~~~----------i~Gyt~~nDvs~Rd~q~~ 173 (293)
T 2q18_X 153 NGK----------ILGYTIMDDVSARDLEAE 173 (293)
T ss_dssp TCC----------EEEEEEEEECEEHHHHHH
T ss_pred CCc----------CceEEEEEEeEeehhhhh
Confidence 985 999999999999999975
No 14
>1hyo_A Fumarylacetoacetate hydrolase; beta-sandwich roll; HET: HBU; 1.30A {Mus musculus} SCOP: b.34.8.1 d.177.1.1 PDB: 1qcn_A 2hzy_A* 1qco_A 1qqj_A
Probab=99.90 E-value=7.3e-24 Score=170.53 Aligned_cols=87 Identities=28% Similarity=0.369 Sum_probs=77.2
Q ss_pred cCcHHHHHHhCC--------CCC---CCCEEEecCCCCcccCCCcEeeCCC--------------CCCceeceeEEEEEC
Q 033723 23 RNYAAHAKELGN--------AVP---KEPVLFLKPTSSYLGNGGTIEVPHP--------------LDSLHHEVELAVVIG 77 (112)
Q Consensus 23 ~NY~~h~~e~~~--------~~p---~~P~~f~K~~~a~~g~~~~i~~P~~--------------~~~ld~E~ELavVIG 77 (112)
.+|.+|++|++. ..| ..|++|+|+++++++++++|.+|.. +..+|||+|||+|||
T Consensus 130 ~~~~~Ha~~~g~~~r~~~~~~~p~~~~~Pv~f~k~~ssvv~~g~~I~~P~~~~~~~~~~~p~~~~s~~lD~E~ELavvIG 209 (421)
T 1hyo_A 130 YSSRQHATNVGIMFRGKENALLPNWLHLPVGYHGRASSIVVSGTPIRRPMGQMRPDNSKPPVYGACRLLDMELEMAFFVG 209 (421)
T ss_dssp CCCHHHHHHHHHHHHCGGGCSCTTTTTSCCEEECCSTTEEETTCCEECCEEEECSCTTSCCEEEECSCEECBEEEEEEEC
T ss_pred echHHHHHHHHhhhccccccCCCCcCCCCEEEEcccceEEcCCCeEECCCCcccCccccccccccccCceEEEEEEEEEC
Confidence 446788887642 134 5799999999999999999999975 688999999999999
Q ss_pred CC---CCCCChhcHhhhhceEEEEeecchHhHHhh
Q 033723 78 QK---ARDVPETTAMDYVGGYAVALDMTAREIQSS 109 (112)
Q Consensus 78 k~---~~~v~~~~A~~~I~Gyti~nD~TaRd~q~~ 109 (112)
|. +++|++++|++||+||+++||||+||+|..
T Consensus 210 ~~~~~g~~v~~~~A~~~I~Gy~l~ND~SaRdiQ~~ 244 (421)
T 1hyo_A 210 PGNRFGEPIPISKAHEHIFGMVLMNDWSARDIQQW 244 (421)
T ss_dssp SCCCTTCCCCHHHHGGGEEEEEEEECCEEHHHHHH
T ss_pred cccccCCCCCHHHHHHhhcEEEEEEeccHHhhhhh
Confidence 99 899999999999999999999999999974
No 15
>2wqt_A 2-keto-4-pentenoate hydratase; lyase, dodecahedral form, aromatic hydrocarbons catabolism; 2.80A {Escherichia coli} PDB: 1sv6_A
Probab=99.84 E-value=2e-21 Score=148.03 Aligned_cols=95 Identities=20% Similarity=0.256 Sum_probs=86.4
Q ss_pred hhccCCCcEEE--EccCcHHHHHHhCCCCCCCCEEEecCCCCcccCCCcEeeCCCCCCceeceeEEEEECCC--CCCCCh
Q 033723 10 KLIQAGTKIVA--VGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQK--ARDVPE 85 (112)
Q Consensus 10 ~~l~~~~ki~~--vg~NY~~h~~e~~~~~p~~P~~f~K~~~a~~g~~~~i~~P~~~~~ld~E~ELavVIGk~--~~~v~~ 85 (112)
..+.+++||+| +|+||++|.+|+|.+.|..|.+|.| ++++++++|.+|.. .+++||+||++||||+ ++++++
T Consensus 49 ~~~~~g~~i~g~KiGln~~~h~~e~g~~~P~~~~lf~~---~~~~~g~~i~~p~~-~~~~~E~ELa~vig~~~~g~~vt~ 124 (270)
T 2wqt_A 49 HDVAQGRRVVGRKVGLTHPKVQQQLGVDQPDFGTLFAD---MCYGDNEIIPFSRV-LQPRIEAEIALVLNRDLPATDITF 124 (270)
T ss_dssp HHHHTTCCEEEEEEECCSHHHHHTTTCSSCEEEEEEGG---GEEETTEEECGGGS-SSCEEEEEEEEEESSCBCCTTCCH
T ss_pred HHhhCCCceEEeEecCCCHHHHHHhCCCCCCEEEEech---heeCCCCeeecCcc-CccceeeEEEEEECCCCCCCCCCH
Confidence 34567899999 9999999999999988999999987 68999999999976 4799999999999999 589999
Q ss_pred hcHhh---hhceEEEEeecchHhHHh
Q 033723 86 TTAMD---YVGGYAVALDMTAREIQS 108 (112)
Q Consensus 86 ~~A~~---~I~Gyti~nD~TaRd~q~ 108 (112)
++|++ ||+||+..||.+.||||.
T Consensus 125 ~~a~~ai~~v~~~~ei~D~~~~~~~~ 150 (270)
T 2wqt_A 125 DELYNAIEWVLPALEVVGSRIRDWSI 150 (270)
T ss_dssp HHHHTTEEEEEEEEEEECCSBGGGCC
T ss_pred HHHHHhhCeEEEEEEEEcCcccccCC
Confidence 99998 889999999999999983
No 16
>2eb4_A 2-OXO-HEPT-3-ENE-1,7-dioate hydratase; lyase; 1.60A {Escherichia coli} PDB: 2eb5_A 2eb6_A
Probab=99.83 E-value=1.1e-21 Score=149.13 Aligned_cols=93 Identities=16% Similarity=0.133 Sum_probs=79.8
Q ss_pred hhccCCCcEEE--EccCcHHHHHHhCCCCCCCCEEEecCCCCcccCCCcEeeCCCCCCceeceeEEEEECCC--CCCCCh
Q 033723 10 KLIQAGTKIVA--VGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQK--ARDVPE 85 (112)
Q Consensus 10 ~~l~~~~ki~~--vg~NY~~h~~e~~~~~p~~P~~f~K~~~a~~g~~~~i~~P~~~~~ld~E~ELavVIGk~--~~~v~~ 85 (112)
..+.+++||+| +|+||++|.+|+|.+. |.++.++.+++++++++|.+|... +++||+||++||||+ ++++++
T Consensus 49 ~~~~~g~~ivg~KiGl~~~~~~~~~g~~~---P~~~~l~~~~~~~~g~~i~~p~~~-~~~~E~ELa~vig~~l~~~~vt~ 124 (267)
T 2eb4_A 49 LKIAEGRTLKGHKIGLTSKAMQASSQISE---PDYGALLDDMFFHDGSDIPTDRFI-VPRIEVELAFVLAKPLRGPNCTL 124 (267)
T ss_dssp HHHHTTCCEEEEEEECHHHHHCSSCCCCS---CEEEEEEGGGEECTTEEECGGGCS-SCEEEEEEEEEESSCBCCSSCCH
T ss_pred HHhhCCCceEEEEeccCCHHHHHHhCCCC---CcEEEEechheecCCCeecCCccC-cccEeeEEEEEECCCCCCCCCCH
Confidence 34556899999 9999999999998765 444455567999999999999864 699999999999999 689999
Q ss_pred hcHhhhhceEEEEeecchHhH
Q 033723 86 TTAMDYVGGYAVALDMTAREI 106 (112)
Q Consensus 86 ~~A~~~I~Gyti~nD~TaRd~ 106 (112)
++|++||+||+++||++.|++
T Consensus 125 ~~a~~~v~g~~~~~ei~d~r~ 145 (267)
T 2eb4_A 125 FDVYNATDYVIPALELIDARC 145 (267)
T ss_dssp HHHHHHEEEEEEEEEEECCSB
T ss_pred HHHHHhhceEEEEEEeecccc
Confidence 999999999999999976443
No 17
>3sri_B Rhoptry NECK protein 2; AMA1, RON2, malaria, cell invasion; 1.60A {Plasmodium falciparum}
Probab=21.24 E-value=18 Score=18.03 Aligned_cols=20 Identities=5% Similarity=0.114 Sum_probs=11.6
Q ss_pred CcchhhHHhhhccCCCcEEEE
Q 033723 1 MATASSAVQKLIQAGTKIVAV 21 (112)
Q Consensus 1 ~~~~~~~~~~~l~~~~ki~~v 21 (112)
|.|+++-|+..++||. -+|+
T Consensus 5 ~GP~tSCyTs~~~PPk-qiCi 24 (29)
T 3sri_B 5 AGPVASCFTTRMSPPQ-QICL 24 (29)
T ss_dssp CCCCCSEEEESSSSCC-EEEE
T ss_pred cCcchheeecccCchH-HHHH
Confidence 4556666666666554 4454
Done!