BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033728
(112 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LPV5|NRT25_ARATH High affinity nitrate transporter 2.5 OS=Arabidopsis thaliana
GN=NRT2.5 PE=2 SV=1
Length = 502
Score = 164 bits (415), Expect = 1e-40, Method: Composition-based stats.
Identities = 79/108 (73%), Positives = 87/108 (80%), Gaps = 3/108 (2%)
Query: 1 MTGGGGNVGAVLTQLIFFKGSKYSKETGITLMGVMIICCTLPIMLIYFPQWGGMFCGPSK 60
MTG GGNVGAVLTQLIFFKGS Y++ETGITLMGVM I C+LPI LIYFPQWGGMFCGPS
Sbjct: 396 MTGAGGNVGAVLTQLIFFKGSTYTRETGITLMGVMSIACSLPICLIYFPQWGGMFCGPSS 455
Query: 61 NMTTEEDYYLSEWNSKEKQKGFHQSSLKFADNSRSERGRSRVNTTTIP 108
TEEDYYL+EWN +EK+K H S KFA+ S SERGR+ TTT P
Sbjct: 456 KKVTEEDYYLAEWNDEEKEKNLHIGSQKFAETSISERGRA---TTTHP 500
>sp|Q9FJH8|NRT24_ARATH High affinity nitrate transporter 2.4 OS=Arabidopsis thaliana
GN=NRT2.4 PE=2 SV=1
Length = 527
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 62/114 (54%), Positives = 80/114 (70%), Gaps = 2/114 (1%)
Query: 1 MTGGGGNVGAVLTQLIFFKGSKYSKETGITLMGVMIICCTLPIMLIYFPQWGGMFCGPSK 60
+TG GGN G+ LTQL+FF S +S E G+T MGVMI+ CTLP+ L++FPQWG MF ++
Sbjct: 414 LTGAGGNFGSGLTQLVFFSTSTFSTEQGLTWMGVMIMACTLPVTLVHFPQWGSMFLPSTE 473
Query: 61 N--MTTEEDYYLSEWNSKEKQKGFHQSSLKFADNSRSERGRSRVNTTTIPPNQV 112
+ +TEE YY+ EW EK+KG H+ SLKFA NSRSERGR + + PP V
Sbjct: 474 DEVKSTEEYYYMKEWTETEKRKGMHEGSLKFAVNSRSERGRRVASAPSPPPEHV 527
>sp|O82811|NRT21_ARATH High-affinity nitrate transporter 2.1 OS=Arabidopsis thaliana
GN=NRT2.1 PE=1 SV=1
Length = 530
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 79/111 (71%), Gaps = 3/111 (2%)
Query: 1 MTGGGGNVGAVLTQLIFFKGSKYSKETGITLMGVMIICCTLPIMLIYFPQWGGMFCGPSK 60
+TG GGN G+ LTQL+FF S ++ E G+T MGVMI+ CTLP+ L++FPQWG MF PS
Sbjct: 414 LTGAGGNFGSGLTQLLFFSTSHFTTEQGLTWMGVMIVACTLPVTLVHFPQWGSMFLPPST 473
Query: 61 NMT--TEEDYYLSEWNSKEKQKGFHQSSLKFADNSRSERGRSRVNTTTIPP 109
+ TE YY SEWN +EKQK HQ SL+FA+N++SE GR RV + PP
Sbjct: 474 DPVKGTEAHYYGSEWNEQEKQKNMHQGSLRFAENAKSEGGR-RVRSAATPP 523
>sp|Q9FJH7|NRT23_ARATH High affinity nitrate transporter 2.3 OS=Arabidopsis thaliana
GN=NRT2.3 PE=1 SV=1
Length = 539
Score = 128 bits (321), Expect = 1e-29, Method: Composition-based stats.
Identities = 60/110 (54%), Positives = 78/110 (70%), Gaps = 3/110 (2%)
Query: 1 MTGGGGNVGAVLTQLIFFKGSKYSKETGITLMGVMIICCTLPIMLIYFPQWGGMFCGPSK 60
+TG GGN G+ LTQL+FF +++S G++LMGVM + CTLP+ I+FPQWG MF PS
Sbjct: 421 LTGAGGNFGSGLTQLLFFSSARFSTAEGLSLMGVMAVLCTLPVAFIHFPQWGSMFLRPST 480
Query: 61 N--MTTEEDYYLSEWNSKEKQKGFHQSSLKFADNSRSERGRSRVNTTTIP 108
+ + EE YY SEW EKQ+G H+ S+KFA+NSRSERGR +V IP
Sbjct: 481 DGERSQEEYYYGSEWTENEKQQGLHEGSIKFAENSRSERGR-KVALANIP 529
>sp|Q9LXH0|NRT26_ARATH High affinity nitrate transporter 2.6 OS=Arabidopsis thaliana
GN=NRT2.6 PE=1 SV=1
Length = 542
Score = 124 bits (310), Expect = 2e-28, Method: Composition-based stats.
Identities = 54/101 (53%), Positives = 74/101 (73%), Gaps = 2/101 (1%)
Query: 1 MTGGGGNVGAVLTQLIFFKGSKYSKETGITLMGVMIICCTLPIMLIYFPQWGGMFCGPSK 60
+TG GGN G+ +TQL+FF S++S G++LMGVM + C+LP+ I+FPQWG MF PS+
Sbjct: 424 LTGAGGNFGSGVTQLLFFSSSRFSTAEGLSLMGVMAVVCSLPVAFIHFPQWGSMFLRPSQ 483
Query: 61 N--MTTEEDYYLSEWNSKEKQKGFHQSSLKFADNSRSERGR 99
+ + EE YY +EW +EK G H+ S+KFA+NSRSERGR
Sbjct: 484 DGEKSKEEHYYGAEWTEEEKSLGLHEGSIKFAENSRSERGR 524
>sp|Q9LMZ9|NRT22_ARATH High-affinity nitrate transporter 2.2 OS=Arabidopsis thaliana
GN=NRT2.2 PE=2 SV=1
Length = 522
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 1 MTGGGGNVGAVLTQLIFFKGSKYSKETGITLMGVMIICCTLPIMLIYFPQWGGMFCGPSK 60
+TG GGN G+ LTQL+FF S+++ E G+T MGVMI+ CTLP+ LI+FPQWG MF PS
Sbjct: 412 LTGAGGNFGSGLTQLVFFSTSRFTTEEGLTWMGVMIVACTLPVTLIHFPQWGSMFFPPSN 471
Query: 61 N-MTTEEDYYLSEWNSKEKQKGFHQSSLKFADNSRSERGRS 100
+ + E YY+ E++ +E+Q G H S FAD +++E G S
Sbjct: 472 DSVDATEHYYVGEYSKEEQQIGMHLKSKLFADGAKTEGGSS 512
>sp|Q9LYK2|NRT27_ARATH High affinity nitrate transporter 2.7 OS=Arabidopsis thaliana
GN=NRT2.7 PE=2 SV=1
Length = 493
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/58 (53%), Positives = 38/58 (65%)
Query: 1 MTGGGGNVGAVLTQLIFFKGSKYSKETGITLMGVMIICCTLPIMLIYFPQWGGMFCGP 58
+TG GG VGAV+TQ + F G K+ I+LMG+M L + IYFPQWGGM CGP
Sbjct: 403 ITGSGGTVGAVVTQFLLFSGDDVRKQRSISLMGLMTFVFALSVTSIYFPQWGGMCCGP 460
>sp|Q5RFV8|CB044_DANRE WD repeat-containing protein C2orf44 homolog OS=Danio rerio
GN=si:dkeyp-115a10.2 PE=2 SV=2
Length = 714
Score = 30.0 bits (66), Expect = 4.3, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 21/50 (42%)
Query: 37 ICCTLPIMLIYFPQWGGMFCGPSKNMTTEEDYYLSEWNSKEKQKGFHQSS 86
IC M P C PS +T + DYYL S + ++ H SS
Sbjct: 228 ICGLNAGMAFDLPNESEGLCRPSAALTVDTDYYLDRRRSCDSERSGHASS 277
>sp|Q4PR21|CCL25_PIG C-C motif chemokine 25 OS=Sus scrofa GN=CCL25 PE=2 SV=1
Length = 151
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 22/92 (23%)
Query: 39 CTLPIMLIYFPQWGGMFCGP--------------SKNMTTEEDYYLSEWNSKEKQKGFHQ 84
C LP ++ +FPQ M CG ++N + ++ + Q G +
Sbjct: 58 CNLPAVIFFFPQKDKMVCGKPGAKWVQFGMKILDNRNKKDSKPHHSGRRFFQGPQSGVRK 117
Query: 85 SS--------LKFADNSRSERGRSRVNTTTIP 108
S LKF+ +RS + ++ + TT IP
Sbjct: 118 LSSGTSRPLLLKFSGPTRSSKRKASLLTTAIP 149
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,273,863
Number of Sequences: 539616
Number of extensions: 1603296
Number of successful extensions: 3620
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 3602
Number of HSP's gapped (non-prelim): 20
length of query: 112
length of database: 191,569,459
effective HSP length: 80
effective length of query: 32
effective length of database: 148,400,179
effective search space: 4748805728
effective search space used: 4748805728
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)