BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033730
MSVHSPCKAPPSSASSLPKEQSQVELELRLLEALEVYPPVKLRGIHRHFVLYGLMEFLRR
RFDRHFAPDEVLQLLDRFYNLDMLKPDDEEMEILNHEEDFCLPQSYFDKEES

High Scoring Gene Products

Symbol, full name Information P value
AT1G26470 protein from Arabidopsis thaliana 8.5e-33
DDB_G0284641 gene from Dictyostelium discoideum 0.00035

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033730
        (112 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2197955 - symbol:AT1G26470 "AT1G26470" species...   358  8.5e-33   1
DICTYBASE|DDB_G0284641 - symbol:DDB_G0284641 species:4468...    88  0.00035   1


>TAIR|locus:2197955 [details] [associations]
            symbol:AT1G26470 "AT1G26470" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006626 "protein targeting to
            mitochondrion" evidence=RCA] InterPro:IPR012423 Pfam:PF07904
            EMBL:CP002684 EMBL:AC013427 GO:GO:0006355 GO:GO:0043189
            PANTHER:PTHR13581 EMBL:AY150388 IPI:IPI00542732 PIR:E86391
            RefSeq:NP_564248.1 UniGene:At.15966 STRING:Q9FZD2 PRIDE:Q9FZD2
            EnsemblPlants:AT1G26470.1 GeneID:839188 KEGG:ath:AT1G26470
            TAIR:At1g26470 InParanoid:Q9FZD2 OMA:GIHRHFV PhylomeDB:Q9FZD2
            ProtClustDB:CLSN2687976 Genevestigator:Q9FZD2 Uniprot:Q9FZD2
        Length = 133

 Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
 Identities = 69/111 (62%), Positives = 78/111 (70%)

Query:     1 MSVHXXXXXXXXXXXXXXXEQSQVXXXXXXXXXXXVYPPVKLRGIHRHFVLYGLMEFLRR 60
             +SVH               EQSQV           +YPPVKLRGIHRHFVLYGLME+L R
Sbjct:    22 LSVHSPCKALPSSASSLSKEQSQVELELRLLEALEIYPPVKLRGIHRHFVLYGLMEYLGR 81

Query:    61 RFDRHFAPDEVLQLLDRFYNLDMLKPDDEEMEILNHEEDFCLPQSYFDKEE 111
              FDR F  DEVLQLLDRFYN++MLK DDE+++ILNHEEDF LPQS+FDKEE
Sbjct:    82 SFDRPFTADEVLQLLDRFYNIEMLKSDDEDIDILNHEEDFTLPQSFFDKEE 132


>DICTYBASE|DDB_G0284641 [details] [associations]
            symbol:DDB_G0284641 species:44689 "Dictyostelium
            discoideum" [GO:0043189 "H4/H2A histone acetyltransferase complex"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR012423 Pfam:PF07904 dictyBase:DDB_G0284641
            GO:GO:0006355 EMBL:AAFI02000070 GO:GO:0043189 RefSeq:XP_638447.1
            EnsemblProtists:DDB0186114 GeneID:8624697 KEGG:ddi:DDB_G0284641
            InParanoid:Q54PC8 OMA:QSKCILL Uniprot:Q54PC8
        Length = 104

 Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
 Identities = 21/64 (32%), Positives = 37/64 (57%)

Query:    44 GIHRHFVLYGLMEFLRRRF-DRHFAPDEVLQLLDRFYNLDMLKPDDEEMEILNHEEDFCL 102
             G+++HF +      L  +   ++F+ D+V + +  FYNLD L  DD+ ++  + +E F L
Sbjct:    33 GVNKHFSILNCTIILAEKLPQKNFSYDQVYKEISEFYNLDEL--DDDVIDE-DEKEVFIL 89

Query:   103 PQSY 106
             P SY
Sbjct:    90 PDSY 93


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.144   0.437    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      112        86   0.00091  102 3  11 22  0.40    29
                                                     29  0.47    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  502 (53 KB)
  Total size of DFA:  103 KB (2072 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.31u 0.19s 10.50t   Elapsed:  00:00:01
  Total cpu time:  10.31u 0.19s 10.50t   Elapsed:  00:00:01
  Start:  Fri May 10 02:06:23 2013   End:  Fri May 10 02:06:24 2013

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